Query 016974
Match_columns 379
No_of_seqs 302 out of 3108
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 06:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016974hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iz6_a 40S ribosomal protein R 100.0 9.7E-64 3.3E-68 460.4 35.2 374 4-377 3-378 (380)
2 1got_B GT-beta; complex (GTP-b 100.0 5.6E-55 1.9E-59 396.0 48.9 338 11-371 3-340 (340)
3 2pbi_B Guanine nucleotide-bind 100.0 2.5E-54 8.5E-59 393.8 48.1 344 9-371 10-354 (354)
4 1vyh_C Platelet-activating fac 100.0 1.3E-52 4.6E-57 389.9 40.6 289 60-372 101-409 (410)
5 3ow8_A WD repeat-containing pr 100.0 1.8E-49 6.1E-54 356.8 42.0 291 58-372 23-319 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 4.2E-49 1.5E-53 351.7 41.1 293 59-374 5-302 (304)
7 3frx_A Guanine nucleotide-bind 100.0 2.8E-48 9.5E-53 348.8 42.3 296 56-373 6-316 (319)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-48 4.9E-53 354.6 39.1 308 57-377 5-338 (345)
9 2hes_X YDR267CP; beta-propelle 100.0 1.5E-47 5.3E-52 345.6 39.7 306 58-374 5-328 (330)
10 4ery_A WD repeat-containing pr 100.0 7.9E-47 2.7E-51 338.1 43.4 297 57-373 13-311 (312)
11 2xzm_R RACK1; ribosome, transl 100.0 4E-47 1.4E-51 344.8 40.5 298 57-374 11-340 (343)
12 4gqb_B Methylosome protein 50; 100.0 4.4E-47 1.5E-51 344.1 38.1 289 64-374 27-331 (344)
13 4g56_B MGC81050 protein; prote 100.0 2.9E-47 9.8E-52 347.5 35.1 292 63-374 38-343 (357)
14 1erj_A Transcriptional repress 100.0 4E-46 1.4E-50 344.5 41.6 290 65-374 62-389 (393)
15 1nr0_A Actin interacting prote 100.0 3.5E-46 1.2E-50 363.9 40.2 298 61-374 141-567 (611)
16 4aow_A Guanine nucleotide-bind 100.0 4.7E-45 1.6E-49 329.7 44.4 301 54-374 25-337 (340)
17 1nr0_A Actin interacting prote 100.0 4.5E-45 1.5E-49 356.2 41.1 292 59-374 51-355 (611)
18 3dm0_A Maltose-binding peripla 100.0 7.9E-45 2.7E-49 359.7 42.4 300 58-375 373-694 (694)
19 2ymu_A WD-40 repeat protein; u 100.0 6.6E-44 2.3E-48 345.4 42.3 283 59-371 295-577 (577)
20 3zwl_B Eukaryotic translation 100.0 3.6E-43 1.2E-47 320.3 42.6 297 58-374 23-346 (369)
21 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-42 6.6E-47 308.7 41.2 288 57-374 8-296 (313)
22 3ei3_B DNA damage-binding prot 100.0 6.2E-43 2.1E-47 321.7 37.3 300 57-374 63-382 (383)
23 2ynn_A Coatomer subunit beta'; 100.0 1E-42 3.5E-47 310.4 37.5 253 100-374 4-259 (304)
24 1sq9_A Antiviral protein SKI8; 100.0 5.8E-43 2E-47 323.0 36.2 310 57-374 6-395 (397)
25 1k8k_C P40, ARP2/3 complex 41 100.0 4E-43 1.4E-47 320.9 34.4 298 63-374 4-361 (372)
26 2ymu_A WD-40 repeat protein; u 100.0 5E-42 1.7E-46 332.2 42.8 287 58-374 253-539 (577)
27 4gqb_B Methylosome protein 50; 100.0 8.9E-43 3.1E-47 315.8 35.1 248 65-330 80-333 (344)
28 1gxr_A ESG1, transducin-like e 100.0 2.4E-41 8.1E-46 304.7 42.3 285 62-372 46-335 (337)
29 1r5m_A SIR4-interacting protei 100.0 9.2E-42 3.1E-46 317.0 40.2 290 64-374 42-425 (425)
30 3ow8_A WD repeat-containing pr 100.0 6.3E-42 2.1E-46 307.6 36.5 248 59-326 72-319 (321)
31 2pm9_A Protein WEB1, protein t 100.0 1.2E-43 4.1E-48 329.4 25.8 306 64-374 64-414 (416)
32 3i2n_A WD repeat-containing pr 100.0 5.5E-42 1.9E-46 311.5 34.8 303 61-377 12-356 (357)
33 4e54_B DNA damage-binding prot 100.0 9.2E-43 3.2E-47 326.2 29.2 297 62-374 114-430 (435)
34 3k26_A Polycomb protein EED; W 100.0 1.4E-42 4.8E-47 316.3 28.7 292 61-373 12-365 (366)
35 1vyh_C Platelet-activating fac 100.0 6.8E-42 2.3E-46 317.9 33.6 249 59-326 142-409 (410)
36 2pm7_B Protein transport prote 100.0 1.9E-41 6.4E-46 301.2 34.6 255 61-327 3-284 (297)
37 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-42 4.7E-47 330.2 28.8 297 66-375 132-518 (524)
38 4a11_B DNA excision repair pro 100.0 4E-41 1.4E-45 311.2 37.7 299 61-376 37-367 (408)
39 4h5i_A Guanine nucleotide-exch 100.0 2.7E-42 9.3E-47 315.5 28.5 289 68-373 15-342 (365)
40 3gre_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46 322.2 29.8 304 58-371 53-437 (437)
41 3dwl_C Actin-related protein 2 100.0 4.6E-43 1.6E-47 321.6 22.8 293 63-372 7-377 (377)
42 2pm9_A Protein WEB1, protein t 100.0 4.3E-42 1.5E-46 319.0 27.9 294 66-374 11-337 (416)
43 4g56_B MGC81050 protein; prote 100.0 4.1E-41 1.4E-45 306.8 31.4 250 62-329 89-344 (357)
44 4gga_A P55CDC, cell division c 100.0 6.7E-40 2.3E-44 305.4 40.1 277 70-374 108-395 (420)
45 4aez_A CDC20, WD repeat-contai 100.0 4.6E-40 1.6E-44 304.7 37.6 286 62-374 86-380 (401)
46 3frx_A Guanine nucleotide-bind 100.0 5E-40 1.7E-44 295.0 36.5 253 59-328 57-317 (319)
47 1got_B GT-beta; complex (GTP-b 100.0 5.1E-40 1.7E-44 297.6 36.7 246 59-325 89-340 (340)
48 3bg1_A Protein SEC13 homolog; 100.0 4.8E-41 1.6E-45 301.3 29.0 255 61-327 7-292 (316)
49 3v7d_B Cell division control p 100.0 1.8E-39 6.3E-44 306.1 41.2 290 58-374 112-421 (464)
50 2pm7_B Protein transport prote 100.0 4.2E-40 1.5E-44 292.5 33.4 257 104-373 4-284 (297)
51 3mkq_A Coatomer beta'-subunit; 100.0 8.6E-40 2.9E-44 329.0 39.6 294 59-374 5-302 (814)
52 4ggc_A P55CDC, cell division c 100.0 4.8E-39 1.6E-43 287.5 39.9 277 70-374 28-315 (318)
53 3vl1_A 26S proteasome regulato 100.0 2.8E-41 9.6E-46 314.2 25.8 282 69-374 58-365 (420)
54 3vl1_A 26S proteasome regulato 100.0 2.1E-39 7.1E-44 301.5 37.0 297 62-374 93-419 (420)
55 1gxr_A ESG1, transducin-like e 100.0 2.3E-39 7.9E-44 291.6 36.0 285 66-374 8-296 (337)
56 2pbi_B Guanine nucleotide-bind 100.0 2.4E-39 8.2E-44 294.8 36.4 248 59-325 98-354 (354)
57 1yfq_A Cell cycle arrest prote 100.0 2E-39 6.9E-44 293.1 35.0 286 61-371 5-321 (342)
58 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-39 1.2E-43 338.5 41.1 291 60-373 608-912 (1249)
59 3dw8_B Serine/threonine-protei 100.0 3.2E-39 1.1E-43 302.6 36.5 303 65-371 26-443 (447)
60 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.7E-39 2E-43 291.3 36.2 259 63-332 57-339 (345)
61 1p22_A F-BOX/WD-repeat protein 100.0 6.7E-39 2.3E-43 300.0 37.1 277 63-374 129-414 (435)
62 1pgu_A Actin interacting prote 100.0 9.8E-39 3.4E-43 311.0 38.8 296 59-373 152-613 (615)
63 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.4E-38 1.5E-42 295.3 41.6 289 57-374 149-442 (445)
64 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-39 9.9E-44 291.6 31.8 305 61-374 5-337 (351)
65 2hes_X YDR267CP; beta-propelle 100.0 9.8E-39 3.3E-43 288.0 34.4 256 60-327 49-327 (330)
66 2xzm_R RACK1; ribosome, transl 100.0 2.5E-38 8.7E-43 286.8 36.8 257 59-329 68-341 (343)
67 3sfz_A APAF-1, apoptotic pepti 100.0 9.9E-39 3.4E-43 335.1 38.0 303 58-374 648-1034(1249)
68 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-37 5.9E-42 291.2 41.1 280 60-374 111-391 (445)
69 3bg1_A Protein SEC13 homolog; 100.0 7E-40 2.4E-44 293.7 23.3 257 105-373 9-292 (316)
70 3mmy_A MRNA export factor; mRN 100.0 4.3E-38 1.5E-42 286.6 35.3 293 58-372 30-344 (368)
71 2oaj_A Protein SNI1; WD40 repe 100.0 6.3E-39 2.1E-43 324.4 32.7 299 61-372 145-659 (902)
72 3v7d_B Cell division control p 100.0 2.3E-37 7.9E-42 291.7 41.3 291 57-371 152-460 (464)
73 3iz6_a 40S ribosomal protein R 100.0 2.3E-39 7.9E-44 297.8 26.7 270 91-374 48-329 (380)
74 3jrp_A Fusion protein of prote 100.0 1.7E-38 5.9E-43 290.6 32.2 261 60-328 4-287 (379)
75 1pgu_A Actin interacting prote 100.0 4.7E-38 1.6E-42 306.1 36.5 290 58-373 54-365 (615)
76 4ery_A WD repeat-containing pr 100.0 3.4E-37 1.2E-41 275.4 38.3 252 100-374 14-268 (312)
77 2oaj_A Protein SNI1; WD40 repe 100.0 2.8E-38 9.6E-43 319.7 34.8 213 62-287 12-248 (902)
78 1erj_A Transcriptional repress 100.0 1.4E-37 4.6E-42 287.3 36.0 245 69-327 125-388 (393)
79 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-36 6.6E-41 304.6 37.6 299 58-374 46-386 (814)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 3.3E-37 1.1E-41 285.5 29.0 292 70-374 37-342 (402)
81 3jrp_A Fusion protein of prote 100.0 2.2E-36 7.5E-41 276.6 33.7 261 100-373 2-286 (379)
82 3jro_A Fusion protein of prote 100.0 7E-38 2.4E-42 312.1 25.6 259 61-327 3-284 (753)
83 3dm0_A Maltose-binding peripla 100.0 1.8E-36 6.1E-41 299.9 34.0 256 59-327 422-692 (694)
84 3vu4_A KMHSV2; beta-propeller 100.0 7.3E-36 2.5E-40 271.9 33.4 285 61-374 13-336 (355)
85 2j04_A TAU60, YPL007P, hypothe 100.0 5.4E-37 1.8E-41 286.2 25.7 264 67-375 15-298 (588)
86 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.9E-35 6.5E-40 277.8 35.5 291 68-373 5-390 (450)
87 3k26_A Polycomb protein EED; W 100.0 2.2E-36 7.4E-41 275.3 26.5 251 66-327 68-365 (366)
88 4aow_A Guanine nucleotide-bind 100.0 5.6E-35 1.9E-39 263.5 35.4 255 100-374 29-286 (340)
89 2xyi_A Probable histone-bindin 100.0 9.9E-36 3.4E-40 278.1 30.7 258 61-328 122-410 (430)
90 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-36 3.9E-41 275.9 23.4 280 72-374 41-333 (343)
91 2j04_B YDR362CP, TAU91; beta p 100.0 5.1E-37 1.7E-41 291.9 21.7 244 119-374 171-428 (524)
92 3gre_A Serine/threonine-protei 100.0 1E-36 3.4E-41 285.2 23.4 285 74-374 34-359 (437)
93 2xyi_A Probable histone-bindin 100.0 4.5E-35 1.5E-39 273.6 34.5 263 103-374 122-410 (430)
94 4aez_A CDC20, WD repeat-contai 100.0 6E-35 2.1E-39 270.3 34.7 251 66-335 133-387 (401)
95 3dwl_C Actin-related protein 2 100.0 1.1E-36 3.7E-41 279.3 21.4 254 105-373 7-280 (377)
96 4gga_A P55CDC, cell division c 100.0 1.2E-34 4E-39 270.0 34.4 251 62-329 142-396 (420)
97 1sq9_A Antiviral protein SKI8; 100.0 2.2E-35 7.6E-40 272.2 29.2 263 59-329 54-396 (397)
98 3dw8_B Serine/threonine-protei 100.0 1.9E-35 6.4E-40 277.0 26.5 259 109-374 28-373 (447)
99 1k8k_C P40, ARP2/3 complex 41 100.0 1.9E-34 6.6E-39 263.3 32.2 250 105-374 4-274 (372)
100 3ei3_B DNA damage-binding prot 100.0 1.1E-34 3.7E-39 266.6 30.5 262 94-374 58-339 (383)
101 4e54_B DNA damage-binding prot 100.0 1.9E-35 6.4E-40 276.6 25.6 256 59-331 156-433 (435)
102 4gq1_A NUP37; propeller, trans 100.0 3.6E-36 1.2E-40 277.7 20.3 248 115-374 95-389 (393)
103 2w18_A PALB2, fancn, partner a 100.0 7.2E-34 2.5E-38 249.8 33.1 303 52-372 20-355 (356)
104 1r5m_A SIR4-interacting protei 100.0 6.6E-34 2.3E-38 264.0 33.9 247 66-327 107-424 (425)
105 3zwl_B Eukaryotic translation 100.0 2.7E-33 9.4E-38 254.9 36.5 259 57-330 64-348 (369)
106 4h5i_A Guanine nucleotide-exch 100.0 1.5E-34 5.2E-39 264.1 27.0 247 61-327 67-342 (365)
107 3bws_A Protein LP49; two-domai 100.0 6.1E-33 2.1E-37 259.0 37.8 286 61-374 117-432 (433)
108 3i2n_A WD repeat-containing pr 100.0 9.8E-34 3.3E-38 257.0 29.7 255 103-374 12-291 (357)
109 3odt_A Protein DOA1; ubiquitin 100.0 9.7E-33 3.3E-37 245.8 35.0 248 58-332 50-300 (313)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 9.3E-34 3.2E-38 262.3 29.4 253 61-331 75-345 (402)
111 3jro_A Fusion protein of prote 100.0 3.3E-34 1.1E-38 285.7 28.1 261 103-374 3-285 (753)
112 2j04_A TAU60, YPL007P, hypothe 100.0 6.9E-35 2.4E-39 272.1 20.7 254 65-363 83-350 (588)
113 4ggc_A P55CDC, cell division c 100.0 9.2E-33 3.1E-37 246.7 33.7 250 62-328 62-315 (318)
114 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-33 8.6E-38 262.2 30.0 246 57-331 163-417 (435)
115 1yfq_A Cell cycle arrest prote 100.0 3E-33 1E-37 252.6 26.8 250 106-374 8-282 (342)
116 1l0q_A Surface layer protein; 100.0 2.1E-31 7.1E-36 245.3 38.6 267 80-374 3-275 (391)
117 4a11_B DNA excision repair pro 100.0 3.3E-32 1.1E-36 251.4 32.6 290 64-375 96-406 (408)
118 4gq1_A NUP37; propeller, trans 100.0 1.4E-33 4.9E-38 260.3 21.6 247 66-326 88-387 (393)
119 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-31 4.1E-36 244.0 29.2 249 93-374 3-271 (355)
120 1l0q_A Surface layer protein; 100.0 4.7E-30 1.6E-34 236.2 38.3 289 58-374 23-342 (391)
121 3mmy_A MRNA export factor; mRN 100.0 1.1E-30 3.7E-35 237.7 30.8 257 94-374 24-304 (368)
122 3lrv_A PRE-mRNA-splicing facto 100.0 1E-31 3.5E-36 243.3 23.5 234 117-374 44-292 (343)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.9E-30 1.3E-34 241.6 32.5 250 62-327 97-390 (450)
124 2w18_A PALB2, fancn, partner a 100.0 8.8E-30 3E-34 223.9 27.6 192 119-326 143-355 (356)
125 3f3f_A Nucleoporin SEH1; struc 100.0 1.6E-29 5.5E-34 227.7 29.7 226 58-287 48-343 (351)
126 3bws_A Protein LP49; two-domai 100.0 5.6E-28 1.9E-32 225.4 36.2 287 66-374 59-390 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.7E-28 1.6E-32 224.9 27.3 279 67-374 62-387 (415)
128 1nir_A Nitrite reductase; hemo 100.0 2.9E-27 1E-31 226.4 33.3 287 74-374 144-458 (543)
129 1nir_A Nitrite reductase; hemo 100.0 5E-27 1.7E-31 224.7 33.9 295 59-374 171-514 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.8E-26 6.1E-31 214.2 27.9 266 61-356 111-410 (415)
131 3u4y_A Uncharacterized protein 100.0 4.1E-25 1.4E-29 198.5 35.1 281 74-374 4-304 (331)
132 2ecf_A Dipeptidyl peptidase IV 100.0 5.8E-26 2E-30 226.1 29.4 285 67-373 36-412 (741)
133 1ri6_A Putative isomerase YBHE 99.9 8.3E-25 2.8E-29 196.9 33.0 278 81-373 7-307 (343)
134 3vgz_A Uncharacterized protein 99.9 1.4E-23 4.7E-28 189.9 37.1 271 67-364 40-334 (353)
135 2ojh_A Uncharacterized protein 99.9 2.6E-25 9E-30 195.6 24.2 258 84-365 17-293 (297)
136 1xfd_A DIP, dipeptidyl aminope 99.9 7.2E-26 2.5E-30 224.8 23.0 285 69-373 18-392 (723)
137 3o4h_A Acylamino-acid-releasin 99.9 9.7E-25 3.3E-29 211.5 27.0 273 67-374 21-315 (582)
138 1k32_A Tricorn protease; prote 99.9 4.5E-24 1.5E-28 220.1 30.0 297 60-374 45-461 (1045)
139 1k32_A Tricorn protease; prote 99.9 7.1E-24 2.4E-28 218.6 30.6 280 61-373 197-501 (1045)
140 2z3z_A Dipeptidyl aminopeptida 99.9 2.4E-23 8.1E-28 206.2 30.6 280 68-374 82-435 (706)
141 1pby_B Quinohemoprotein amine 99.9 4.5E-23 1.5E-27 185.1 29.4 265 80-374 2-310 (337)
142 2ojh_A Uncharacterized protein 99.9 1.4E-23 4.8E-28 184.4 24.4 241 62-319 36-293 (297)
143 2ecf_A Dipeptidyl peptidase IV 99.9 3.2E-23 1.1E-27 206.3 28.2 279 69-374 110-459 (741)
144 3scy_A Hypothetical bacterial 99.9 1.1E-21 3.7E-26 178.5 35.4 278 86-373 24-336 (361)
145 3u4y_A Uncharacterized protein 99.9 7.8E-22 2.7E-26 177.0 33.7 258 61-330 34-306 (331)
146 3hfq_A Uncharacterized protein 99.9 9.5E-22 3.3E-26 177.8 34.4 275 87-373 14-316 (347)
147 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-23 4.5E-28 208.1 24.0 282 70-373 28-390 (706)
148 1ri6_A Putative isomerase YBHE 99.9 4.4E-22 1.5E-26 179.1 29.2 277 65-356 35-335 (343)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 9.6E-22 3.3E-26 183.2 28.6 250 67-325 36-330 (434)
150 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-22 7.3E-27 199.8 25.1 284 60-361 50-427 (723)
151 3pe7_A Oligogalacturonate lyas 99.9 4.5E-22 1.6E-26 182.6 23.0 293 59-373 22-381 (388)
152 3hfq_A Uncharacterized protein 99.9 4.9E-21 1.7E-25 173.1 29.4 259 64-332 36-323 (347)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 9.1E-22 3.1E-26 183.3 24.1 228 89-329 23-279 (434)
154 3vgz_A Uncharacterized protein 99.9 4.2E-20 1.4E-24 166.9 31.7 249 110-374 41-303 (353)
155 1jmx_B Amine dehydrogenase; ox 99.9 1.4E-20 4.7E-25 169.8 28.4 276 72-374 4-325 (349)
156 1pby_B Quinohemoprotein amine 99.9 1.4E-20 4.6E-25 168.9 27.4 242 69-335 35-317 (337)
157 3o4h_A Acylamino-acid-releasin 99.9 2.1E-21 7.1E-26 188.1 23.4 230 110-372 22-274 (582)
158 3scy_A Hypothetical bacterial 99.9 2.8E-19 9.6E-24 162.5 34.1 277 66-352 48-360 (361)
159 1z68_A Fibroblast activation p 99.9 5.7E-22 1.9E-26 196.8 17.5 280 72-373 20-390 (719)
160 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.7E-19 1.9E-23 160.9 27.7 277 89-374 14-341 (365)
161 1z68_A Fibroblast activation p 99.8 3.4E-20 1.2E-24 184.0 20.3 300 62-373 51-442 (719)
162 3c5m_A Oligogalacturonate lyas 99.8 6.1E-20 2.1E-24 168.6 20.4 275 70-373 38-381 (396)
163 3azo_A Aminopeptidase; POP fam 99.8 6.9E-19 2.4E-23 172.9 27.4 292 61-372 17-365 (662)
164 4a5s_A Dipeptidyl peptidase 4 99.8 8.1E-20 2.8E-24 181.8 19.9 285 69-374 18-353 (740)
165 1jmx_B Amine dehydrogenase; ox 99.8 2.8E-18 9.6E-23 154.6 26.8 240 69-335 44-332 (349)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.4E-18 1.5E-22 155.0 26.9 252 66-329 38-342 (365)
167 3fvz_A Peptidyl-glycine alpha- 99.8 2.6E-17 8.8E-22 147.7 31.2 250 68-327 24-321 (329)
168 2oiz_A Aromatic amine dehydrog 99.8 8.5E-18 2.9E-22 152.8 27.3 264 87-375 29-335 (361)
169 1q7f_A NHL, brain tumor CG1071 99.8 7E-17 2.4E-21 141.7 32.2 252 64-375 26-281 (286)
170 2oiz_A Aromatic amine dehydrog 99.8 4.6E-17 1.6E-21 147.9 30.4 272 60-356 44-360 (361)
171 2dg1_A DRP35, lactonase; beta 99.8 6.4E-17 2.2E-21 145.1 29.4 278 69-365 7-301 (333)
172 3fvz_A Peptidyl-glycine alpha- 99.8 1E-16 3.5E-21 143.8 30.1 251 109-374 23-322 (329)
173 2gop_A Trilobed protease; beta 99.8 7.4E-16 2.5E-20 138.9 31.3 257 69-373 16-330 (347)
174 3pe7_A Oligogalacturonate lyas 99.8 2.4E-17 8.2E-22 151.0 20.8 260 93-374 14-329 (388)
175 4a5s_A Dipeptidyl peptidase 4 99.8 5.2E-16 1.8E-20 154.4 29.7 303 60-373 49-448 (740)
176 2z2n_A Virginiamycin B lyase; 99.8 7.3E-14 2.5E-18 122.7 38.9 283 63-373 10-294 (299)
177 2dg1_A DRP35, lactonase; beta 99.7 4.2E-14 1.4E-18 126.7 33.6 243 61-319 38-301 (333)
178 3e5z_A Putative gluconolactona 99.7 7.3E-15 2.5E-19 129.5 27.9 242 101-368 19-281 (296)
179 3azo_A Aminopeptidase; POP fam 99.7 6.4E-16 2.2E-20 151.7 23.2 254 61-332 61-373 (662)
180 1qks_A Cytochrome CD1 nitrite 99.7 9.6E-14 3.3E-18 132.7 37.3 287 77-375 165-478 (567)
181 2xdw_A Prolyl endopeptidase; a 99.7 7.2E-15 2.5E-19 145.5 29.4 250 65-330 122-416 (710)
182 2xdw_A Prolyl endopeptidase; a 99.7 6.5E-14 2.2E-18 138.6 36.2 243 111-374 126-414 (710)
183 3dsm_A Uncharacterized protein 99.7 4.3E-14 1.5E-18 126.6 30.2 267 86-374 14-302 (328)
184 3c5m_A Oligogalacturonate lyas 99.7 1.1E-15 3.8E-20 140.0 18.7 254 93-374 14-329 (396)
185 2bkl_A Prolyl endopeptidase; m 99.7 2.3E-15 8E-20 148.6 21.9 250 65-331 118-400 (695)
186 1rwi_B Serine/threonine-protei 99.7 3.8E-14 1.3E-18 122.9 25.4 240 111-375 25-265 (270)
187 2qc5_A Streptogramin B lactona 99.7 3.7E-12 1.3E-16 111.8 38.3 280 65-372 17-298 (300)
188 2bkl_A Prolyl endopeptidase; m 99.7 1.2E-13 4E-18 136.5 31.7 242 110-374 121-397 (695)
189 1qks_A Cytochrome CD1 nitrite 99.7 1.1E-12 3.9E-17 125.3 37.3 285 69-374 198-538 (567)
190 3e5z_A Putative gluconolactona 99.7 1.9E-13 6.4E-18 120.4 29.7 242 62-329 22-287 (296)
191 3no2_A Uncharacterized protein 99.7 3.4E-13 1.1E-17 117.5 30.9 224 77-316 3-231 (276)
192 1rwi_B Serine/threonine-protei 99.7 6.8E-14 2.3E-18 121.3 24.8 239 69-328 25-264 (270)
193 1q7f_A NHL, brain tumor CG1071 99.6 3.9E-13 1.3E-17 117.7 27.6 208 156-374 27-238 (286)
194 2mad_H Methylamine dehydrogena 99.6 7.1E-12 2.4E-16 114.0 36.5 277 76-374 29-350 (373)
195 2gop_A Trilobed protease; beta 99.6 1.2E-13 4.3E-18 124.2 24.4 223 68-327 59-330 (347)
196 1yr2_A Prolyl oligopeptidase; 99.6 6.6E-13 2.2E-17 132.0 28.7 241 111-374 164-441 (741)
197 3hrp_A Uncharacterized protein 99.6 6.8E-12 2.3E-16 115.6 32.2 246 69-326 132-408 (409)
198 3no2_A Uncharacterized protein 99.6 2.4E-12 8.1E-17 112.2 26.9 218 120-362 4-231 (276)
199 2mad_H Methylamine dehydrogena 99.6 1.8E-11 6.3E-16 111.2 33.8 243 72-334 70-356 (373)
200 3dsm_A Uncharacterized protein 99.6 1.8E-12 6.3E-17 115.9 26.8 242 69-335 45-308 (328)
201 2z2n_A Virginiamycin B lyase; 99.6 2.8E-11 9.5E-16 106.1 34.0 242 109-374 14-255 (299)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 6.4E-12 2.2E-16 111.2 29.9 248 109-374 17-299 (314)
203 3sjl_D Methylamine dehydrogena 99.6 2.6E-12 8.9E-17 115.8 27.1 259 72-354 82-384 (386)
204 1yr2_A Prolyl oligopeptidase; 99.6 6.7E-13 2.3E-17 132.0 25.2 249 65-331 160-444 (741)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5E-12 1.7E-16 111.9 27.7 240 68-328 18-299 (314)
206 3iuj_A Prolyl endopeptidase; h 99.5 2E-12 6.7E-17 127.6 24.6 249 65-331 126-408 (693)
207 3sjl_D Methylamine dehydrogena 99.5 1E-11 3.5E-16 111.9 27.1 276 75-375 40-364 (386)
208 2qc5_A Streptogramin B lactona 99.5 6.5E-10 2.2E-14 97.3 33.7 242 109-374 19-260 (300)
209 3c75_H MADH, methylamine dehyd 99.5 4.7E-11 1.6E-15 109.5 26.2 274 77-375 82-403 (426)
210 3g4e_A Regucalcin; six bladed 99.5 4.8E-10 1.6E-14 98.7 31.8 231 67-318 12-262 (297)
211 3g4e_A Regucalcin; six bladed 99.5 4.9E-10 1.7E-14 98.6 31.9 234 109-363 12-261 (297)
212 1xip_A Nucleoporin NUP159; bet 99.5 3.3E-12 1.1E-16 115.5 17.9 180 160-360 39-230 (388)
213 2qe8_A Uncharacterized protein 99.4 2.5E-11 8.5E-16 109.3 23.3 262 68-367 17-314 (343)
214 1xip_A Nucleoporin NUP159; bet 99.4 4.4E-12 1.5E-16 114.7 15.6 183 110-314 38-230 (388)
215 3c75_H MADH, methylamine dehyd 99.4 1E-10 3.5E-15 107.3 24.4 246 72-335 122-409 (426)
216 3hrp_A Uncharacterized protein 99.4 1.2E-09 4.2E-14 100.5 31.4 246 111-372 132-408 (409)
217 3dr2_A Exported gluconolactona 99.4 6.3E-10 2.1E-14 98.3 26.7 239 102-369 37-302 (305)
218 2ghs_A AGR_C_1268P; regucalcin 99.3 4.9E-09 1.7E-13 93.5 30.9 230 112-364 51-292 (326)
219 3iuj_A Prolyl endopeptidase; h 99.3 1.1E-09 3.8E-14 107.9 27.1 240 110-374 129-405 (693)
220 2ghs_A AGR_C_1268P; regucalcin 99.3 1.3E-08 4.3E-13 90.8 30.6 226 70-319 51-293 (326)
221 3dr2_A Exported gluconolactona 99.3 3.1E-09 1.1E-13 93.8 26.1 237 63-325 40-303 (305)
222 1mda_H Methylamine dehydrogena 99.3 2.6E-10 9E-15 102.8 19.2 248 59-336 58-354 (368)
223 1mda_H Methylamine dehydrogena 99.2 9.5E-10 3.3E-14 99.1 20.4 252 90-374 47-346 (368)
224 2qe8_A Uncharacterized protein 99.2 3.8E-10 1.3E-14 101.5 16.7 242 110-374 17-279 (343)
225 1kb0_A Quinohemoprotein alcoho 99.2 1.1E-08 3.7E-13 100.3 26.1 278 79-374 77-507 (677)
226 1yiq_A Quinohemoprotein alcoho 99.1 2E-08 7E-13 98.5 26.3 266 79-361 121-536 (689)
227 1yiq_A Quinohemoprotein alcoho 99.1 2E-08 7E-13 98.5 25.1 282 79-374 70-505 (689)
228 1kb0_A Quinohemoprotein alcoho 99.1 1E-07 3.4E-12 93.4 28.5 261 79-360 128-536 (677)
229 2hz6_A Endoplasmic reticulum t 99.1 1.6E-10 5.6E-15 104.9 7.1 225 78-330 8-238 (369)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.0 4.9E-07 1.7E-11 82.0 29.5 264 78-371 102-375 (376)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.0 8.1E-07 2.8E-11 80.5 30.5 269 78-374 52-337 (376)
232 2hz6_A Endoplasmic reticulum t 99.0 1.7E-10 6E-15 104.7 5.9 204 120-356 8-216 (369)
233 2ece_A 462AA long hypothetical 99.0 8.8E-07 3E-11 80.6 29.0 237 116-362 88-399 (462)
234 1npe_A Nidogen, entactin; glyc 99.0 2.8E-06 9.7E-11 73.0 31.4 250 81-356 3-263 (267)
235 3hxj_A Pyrrolo-quinoline quino 98.9 7.9E-08 2.7E-12 85.3 19.4 267 66-374 58-324 (330)
236 3hxj_A Pyrrolo-quinoline quino 98.9 8E-08 2.7E-12 85.3 18.0 260 73-374 25-284 (330)
237 2iwa_A Glutamine cyclotransfer 98.9 1.3E-06 4.4E-11 74.6 23.4 204 160-374 22-237 (266)
238 1npe_A Nidogen, entactin; glyc 98.8 2.3E-05 7.9E-10 67.2 30.6 223 69-310 37-263 (267)
239 3nol_A Glutamine cyclotransfer 98.8 2E-06 7E-11 72.6 21.7 192 159-363 43-244 (262)
240 4a2l_A BT_4663, two-component 98.8 6.7E-05 2.3E-09 75.0 36.9 286 70-373 175-479 (795)
241 2ece_A 462AA long hypothetical 98.8 2E-06 6.9E-11 78.2 22.9 200 168-373 93-351 (462)
242 1fwx_A Nitrous oxide reductase 98.8 1.3E-07 4.5E-12 89.0 14.8 256 77-374 99-431 (595)
243 3nok_A Glutaminyl cyclase; bet 98.7 3.4E-06 1.2E-10 71.2 21.1 190 159-362 55-253 (268)
244 4a2l_A BT_4663, two-component 98.7 0.00011 3.8E-09 73.4 35.9 287 67-372 214-524 (795)
245 1kv9_A Type II quinohemoprotei 98.7 6.9E-06 2.4E-10 80.3 25.8 280 79-374 66-488 (668)
246 1k3i_A Galactose oxidase precu 98.7 8.6E-06 2.9E-10 79.6 25.8 274 72-363 190-530 (656)
247 2fp8_A Strictosidine synthase; 98.7 3.8E-05 1.3E-09 67.9 27.6 246 112-374 21-313 (322)
248 1kv9_A Type II quinohemoprotei 98.7 1.6E-05 5.6E-10 77.7 26.5 264 79-362 117-520 (668)
249 2fp8_A Strictosidine synthase; 98.6 7.4E-05 2.5E-09 66.0 27.7 240 70-327 21-312 (322)
250 3mbr_X Glutamine cyclotransfer 98.6 2.8E-05 9.4E-10 65.1 23.1 192 159-363 21-223 (243)
251 2p4o_A Hypothetical protein; p 98.6 0.00014 4.7E-09 63.8 28.8 229 110-364 32-278 (306)
252 2iwa_A Glutamine cyclotransfer 98.6 4.9E-05 1.7E-09 64.8 24.6 197 70-281 23-237 (266)
253 2p4o_A Hypothetical protein; p 98.6 0.0003 1E-08 61.6 34.0 236 68-319 32-279 (306)
254 2ad6_A Methanol dehydrogenase 98.6 5.3E-05 1.8E-09 72.6 26.6 279 79-374 62-494 (571)
255 3nol_A Glutamine cyclotransfer 98.5 0.0001 3.6E-09 62.1 23.9 196 60-318 34-245 (262)
256 1fwx_A Nitrous oxide reductase 98.5 1.4E-05 4.7E-10 75.4 20.4 189 169-374 100-361 (595)
257 2ad6_A Methanol dehydrogenase 98.5 0.00011 3.8E-09 70.3 26.5 263 79-359 115-522 (571)
258 1w6s_A Methanol dehydrogenase 98.5 0.00022 7.4E-09 68.5 27.9 281 79-374 62-503 (599)
259 3qqz_A Putative uncharacterize 98.4 0.00035 1.2E-08 59.2 25.8 210 153-371 21-250 (255)
260 3v65_B Low-density lipoprotein 98.4 0.00072 2.5E-08 61.3 29.9 239 70-330 79-320 (386)
261 3v9f_A Two-component system se 98.4 0.00091 3.1E-08 66.7 33.1 289 68-373 258-567 (781)
262 2xe4_A Oligopeptidase B; hydro 98.4 0.00026 8.9E-09 70.2 28.6 199 65-279 170-398 (751)
263 3v64_C Agrin; beta propeller, 98.4 0.00097 3.3E-08 59.6 29.6 241 67-330 33-277 (349)
264 3nok_A Glutaminyl cyclase; bet 98.4 0.00025 8.4E-09 59.9 23.4 186 110-316 55-253 (268)
265 1flg_A Protein (quinoprotein e 98.4 0.00044 1.5E-08 66.3 28.1 282 79-374 68-516 (582)
266 3qqz_A Putative uncharacterize 98.4 0.00068 2.3E-08 57.3 26.0 211 61-279 20-251 (255)
267 3mbr_X Glutamine cyclotransfer 98.4 0.00072 2.5E-08 56.5 25.2 190 65-316 16-222 (243)
268 3tc9_A Hypothetical hydrolase; 98.4 0.00067 2.3E-08 62.5 27.7 243 70-326 139-428 (430)
269 3ei3_A DNA damage-binding prot 98.3 0.0022 7.7E-08 66.2 33.5 283 67-374 553-913 (1158)
270 4hw6_A Hypothetical protein, I 98.3 0.0016 5.3E-08 60.1 28.7 245 70-326 141-431 (433)
271 3v65_B Low-density lipoprotein 98.3 0.001 3.5E-08 60.3 26.5 207 69-289 117-326 (386)
272 3v64_C Agrin; beta propeller, 98.3 0.0021 7.2E-08 57.4 28.0 206 69-288 74-282 (349)
273 1w6s_A Methanol dehydrogenase 98.3 0.00087 3E-08 64.3 26.7 82 270-360 451-533 (599)
274 3tc9_A Hypothetical hydrolase; 98.2 0.0016 5.4E-08 60.0 27.1 246 112-373 139-429 (430)
275 1flg_A Protein (quinoprotein e 98.2 0.0019 6.5E-08 61.9 28.5 81 271-360 465-546 (582)
276 1k3i_A Galactose oxidase precu 98.2 0.00021 7.1E-09 69.8 21.8 244 114-374 190-497 (656)
277 3v9f_A Two-component system se 98.2 0.008 2.8E-07 59.8 35.4 284 67-372 312-609 (781)
278 4hw6_A Hypothetical protein, I 98.1 0.0068 2.3E-07 55.8 27.6 245 112-373 141-432 (433)
279 2p9w_A MAL S 1 allergenic prot 98.0 0.0022 7.4E-08 56.0 22.3 209 161-374 15-265 (334)
280 1ijq_A LDL receptor, low-densi 98.0 0.0072 2.5E-07 53.0 31.8 227 89-330 10-240 (316)
281 1ijq_A LDL receptor, low-densi 98.0 0.0072 2.5E-07 53.0 28.8 205 69-288 31-245 (316)
282 3sov_A LRP-6, low-density lipo 97.9 0.011 3.9E-07 51.8 27.2 224 88-330 12-240 (318)
283 3amr_A 3-phytase; beta-propell 97.9 0.0093 3.2E-07 52.5 23.4 185 173-373 42-262 (355)
284 2xbg_A YCF48-like protein; pho 97.9 0.013 4.4E-07 51.6 34.9 279 68-371 36-319 (327)
285 3p5b_L Low density lipoprotein 97.8 0.018 6.1E-07 52.4 34.3 231 87-331 90-323 (400)
286 2xe4_A Oligopeptidase B; hydro 97.8 0.0008 2.7E-08 66.7 17.3 155 208-373 175-353 (751)
287 3m0c_C LDL receptor, low-densi 97.7 0.042 1.4E-06 54.4 29.1 207 68-288 424-639 (791)
288 3kya_A Putative phosphatase; s 97.7 0.028 9.7E-07 52.2 29.0 250 70-329 141-476 (496)
289 3p5b_L Low density lipoprotein 97.7 0.028 9.7E-07 51.0 31.5 208 68-289 112-328 (400)
290 1n7d_A LDL receptor, low-densi 97.7 0.00082 2.8E-08 65.9 15.4 234 87-335 384-621 (699)
291 3sov_A LRP-6, low-density lipo 97.7 0.024 8.3E-07 49.7 27.3 206 69-288 36-245 (318)
292 3sre_A PON1, serum paraoxonase 97.6 0.019 6.6E-07 51.0 22.2 186 129-326 81-296 (355)
293 3m0c_C LDL receptor, low-densi 97.6 0.068 2.3E-06 52.9 30.9 229 87-330 402-634 (791)
294 2p9w_A MAL S 1 allergenic prot 97.6 0.0055 1.9E-07 53.5 17.2 164 210-373 16-214 (334)
295 2ism_A Putative oxidoreductase 97.6 0.041 1.4E-06 49.0 24.3 233 69-316 32-333 (352)
296 3sre_A PON1, serum paraoxonase 97.5 0.016 5.5E-07 51.5 20.1 140 227-373 81-251 (355)
297 1n7d_A LDL receptor, low-densi 97.4 0.0024 8.1E-08 62.7 14.6 205 69-288 407-621 (699)
298 3a9g_A Putative uncharacterize 97.4 0.06 2.1E-06 47.9 25.4 238 110-362 29-330 (354)
299 4a0p_A LRP6, LRP-6, low-densit 97.3 0.13 4.5E-06 49.6 31.4 222 87-330 13-239 (628)
300 3s94_A LRP-6, low-density lipo 97.2 0.19 6.5E-06 48.4 26.9 225 88-331 17-246 (619)
301 2xbg_A YCF48-like protein; pho 97.1 0.12 4E-06 45.4 30.0 234 110-368 36-273 (327)
302 3kya_A Putative phosphatase; s 97.1 0.2 6.7E-06 46.6 23.9 208 161-374 141-410 (496)
303 3das_A Putative oxidoreductase 97.1 0.15 5.1E-06 45.1 25.7 60 61-120 25-90 (347)
304 2vpj_A Kelch-like protein 12; 96.9 0.19 6.5E-06 43.2 21.5 221 89-330 31-280 (301)
305 3s94_A LRP-6, low-density lipo 96.8 0.38 1.3E-05 46.3 32.8 286 68-375 84-424 (619)
306 3amr_A 3-phytase; beta-propell 96.8 0.24 8.2E-06 43.6 25.6 197 121-332 40-268 (355)
307 2ism_A Putative oxidoreductase 96.8 0.08 2.7E-06 47.1 17.1 106 251-362 31-153 (352)
308 3ei3_A DNA damage-binding prot 96.7 0.7 2.4E-05 47.9 29.2 277 78-374 285-591 (1158)
309 3a9g_A Putative uncharacterize 96.5 0.4 1.4E-05 42.5 26.7 234 68-316 29-330 (354)
310 2xn4_A Kelch-like protein 2; s 96.5 0.35 1.2E-05 41.6 21.2 147 171-331 109-279 (302)
311 4a0p_A LRP6, LRP-6, low-densit 96.4 0.72 2.5E-05 44.4 39.3 200 68-283 37-239 (628)
312 2g8s_A Glucose/sorbosone dehyd 96.3 0.52 1.8E-05 41.8 22.0 239 69-315 19-340 (353)
313 1cru_A Protein (soluble quinop 96.1 0.34 1.2E-05 44.7 17.5 110 251-363 27-163 (454)
314 2xzh_A Clathrin heavy chain 1; 96.1 0.63 2.1E-05 40.5 30.0 263 87-373 47-331 (365)
315 3das_A Putative oxidoreductase 95.9 0.44 1.5E-05 42.0 16.2 110 250-362 31-158 (347)
316 2vpj_A Kelch-like protein 12; 95.8 0.78 2.7E-05 39.2 22.1 186 171-374 63-278 (301)
317 3pbp_A Nucleoporin NUP82; beta 95.7 1.1 3.8E-05 40.5 19.6 138 228-368 40-206 (452)
318 1tl2_A L10, protein (tachylect 95.7 0.031 1.1E-06 45.6 7.2 108 252-368 42-157 (236)
319 1bpo_A Protein (clathrin); cla 95.7 1.2 4.1E-05 40.4 31.7 263 87-373 46-330 (494)
320 3ii7_A Kelch-like protein 7; p 95.6 0.98 3.3E-05 38.7 24.0 226 81-330 14-274 (306)
321 3pbp_A Nucleoporin NUP82; beta 95.5 1 3.5E-05 40.7 17.1 115 208-324 67-208 (452)
322 1cru_A Protein (soluble quinop 95.5 1.3 4.3E-05 40.8 18.4 107 209-316 29-162 (454)
323 1tl2_A L10, protein (tachylect 95.4 0.26 8.9E-06 40.2 11.5 146 208-367 42-203 (236)
324 2g8s_A Glucose/sorbosone dehyd 95.2 1.5 5.1E-05 38.8 27.1 70 300-372 273-350 (353)
325 2xn4_A Kelch-like protein 2; s 95.1 1.4 4.7E-05 37.7 21.2 186 171-374 62-276 (302)
326 1xi4_A Clathrin heavy chain; a 95.0 3.2 0.00011 43.6 20.6 224 87-332 46-293 (1630)
327 1zgk_A Kelch-like ECH-associat 94.8 1.7 6E-05 37.2 20.2 146 171-330 122-289 (308)
328 3ott_A Two-component system se 94.7 3.6 0.00012 40.4 34.2 287 69-373 192-501 (758)
329 3ii7_A Kelch-like protein 7; p 94.2 2.3 7.9E-05 36.3 23.2 186 171-374 56-272 (306)
330 4asc_A Kelch repeat and BTB do 92.8 4.2 0.00014 34.9 25.1 224 81-330 7-279 (315)
331 1zgk_A Kelch-like ECH-associat 92.8 4.2 0.00014 34.8 16.1 186 78-282 70-288 (308)
332 2uvk_A YJHT; unknown function, 92.7 4.8 0.00017 35.2 16.3 28 260-287 315-348 (357)
333 2wg3_C Hedgehog-interacting pr 92.4 3.3 0.00011 38.1 14.3 113 251-365 14-160 (463)
334 4asc_A Kelch repeat and BTB do 90.7 7.3 0.00025 33.3 21.0 135 218-364 98-253 (315)
335 2xzh_A Clathrin heavy chain 1; 90.0 9.2 0.00031 33.3 26.6 195 75-286 74-295 (365)
336 2zwa_A Leucine carboxyl methyl 89.8 15 0.00052 35.6 21.4 199 77-283 396-637 (695)
337 3s25_A Hypothetical 7-bladed b 89.7 9 0.00031 32.8 20.6 139 214-374 111-255 (302)
338 3sbq_A Nitrous-oxide reductase 87.5 1.9 6.5E-05 40.4 8.1 77 250-328 322-408 (638)
339 2zwa_A Leucine carboxyl methyl 86.9 23 0.0008 34.3 18.2 156 171-330 398-579 (695)
340 2uvk_A YJHT; unknown function, 86.9 15 0.00051 31.9 19.9 61 78-140 19-95 (357)
341 2be1_A Serine/threonine-protei 86.6 4.2 0.00014 35.6 9.6 114 221-336 12-138 (339)
342 1bpo_A Protein (clathrin); cla 86.5 19 0.00064 32.8 26.7 197 74-287 72-295 (494)
343 1xi4_A Clathrin heavy chain; a 85.3 42 0.0014 35.6 17.9 198 75-285 73-293 (1630)
344 4gq2_M Nucleoporin NUP120; bet 83.5 5.5 0.00019 40.4 10.1 39 69-107 237-275 (950)
345 2woz_A Kelch repeat and BTB do 82.8 21 0.00073 30.3 21.2 96 260-364 157-263 (318)
346 2woz_A Kelch repeat and BTB do 82.7 22 0.00074 30.3 26.0 146 171-331 110-290 (318)
347 2pnv_A Small conductance calci 82.6 1.6 5.5E-05 25.0 3.3 31 3-33 9-39 (43)
348 2be1_A Serine/threonine-protei 82.3 25 0.00084 30.7 18.8 113 172-289 11-138 (339)
349 2akf_A Coronin-1A; coiled coil 80.6 3.7 0.00013 20.8 3.8 25 5-29 1-25 (32)
350 4gq2_M Nucleoporin NUP120; bet 80.5 7.5 0.00026 39.4 9.9 37 252-288 237-273 (950)
351 3s25_A Hypothetical 7-bladed b 78.0 32 0.0011 29.4 20.3 178 74-280 59-254 (302)
352 3sbq_A Nitrous-oxide reductase 65.3 8.3 0.00028 36.2 5.2 70 211-281 327-408 (638)
353 3zwu_A Alkaline phosphatase PH 64.3 28 0.00097 33.0 8.9 59 253-315 478-548 (592)
354 4fhn_B Nucleoporin NUP120; pro 64.3 5.8 0.0002 41.2 4.6 38 70-107 240-277 (1139)
355 2wg3_C Hedgehog-interacting pr 64.2 86 0.003 28.6 26.1 29 111-139 15-44 (463)
356 2jo8_A Serine/threonine-protei 63.5 13 0.00044 22.1 4.0 31 4-34 11-45 (51)
357 3f7f_A Nucleoporin NUP120; nuc 58.6 14 0.00049 35.7 5.8 37 69-107 223-259 (729)
358 3b7f_A Glycosyl hydrolase, BNR 58.5 95 0.0033 27.2 25.7 47 80-127 23-74 (394)
359 3twe_A Alpha4H; unknown functi 58.1 14 0.00049 17.6 3.5 21 13-33 4-24 (27)
360 3q6k_A 43.2 kDa salivary prote 57.4 1E+02 0.0035 27.3 22.3 173 182-362 124-342 (381)
361 4a9v_A PHOX; hydrolase, beta-p 57.3 59 0.002 30.7 9.5 61 252-316 477-549 (592)
362 1dip_A Delta-sleep-inducing pe 57.3 32 0.0011 22.0 5.2 33 1-33 13-45 (78)
363 4fhn_B Nucleoporin NUP120; pro 57.2 9.8 0.00034 39.4 4.8 37 252-288 239-275 (1139)
364 2jee_A YIIU; FTSZ, septum, coi 56.3 21 0.00071 23.6 4.5 26 3-28 6-31 (81)
365 1bb1_B Designed, thermostable 56.3 19 0.00065 18.4 4.3 29 3-31 2-30 (36)
366 3zwu_A Alkaline phosphatase PH 55.5 36 0.0012 32.3 7.9 59 300-361 478-548 (592)
367 2yy0_A C-MYC-binding protein; 55.5 31 0.0011 20.7 4.9 30 5-34 21-50 (53)
368 3f7f_A Nucleoporin NUP120; nuc 53.3 22 0.00076 34.5 6.1 36 252-289 223-258 (729)
369 2l5g_A GPS2 protein, G protein 52.0 27 0.00092 18.9 4.1 24 4-27 9-32 (38)
370 3ott_A Two-component system se 49.0 1.9E+02 0.0066 27.9 35.8 277 68-367 63-346 (758)
371 4a9v_A PHOX; hydrolase, beta-p 46.3 1.1E+02 0.0038 28.8 9.5 60 69-128 477-549 (592)
372 1kd8_B GABH BLL, GCN4 acid bas 43.0 39 0.0013 18.1 4.7 29 4-32 2-30 (36)
373 2oxj_A Hybrid alpha/beta pepti 41.4 40 0.0014 17.8 4.7 30 4-33 2-31 (34)
374 2oqq_A Transcription factor HY 40.9 48 0.0016 18.6 4.6 26 5-30 5-30 (42)
375 3azd_A Short alpha-tropomyosin 38.3 20 0.00067 19.7 1.9 32 2-33 3-34 (37)
376 3efg_A Protein SLYX homolog; x 38.1 60 0.0021 21.2 4.6 29 4-32 15-43 (78)
377 3tq2_A KE1; parallel three hel 36.3 45 0.0016 17.0 3.2 23 5-27 10-32 (36)
378 3c3f_A Alpha/beta peptide with 35.8 50 0.0017 17.4 4.7 30 4-33 2-31 (34)
379 1zxa_A CGMP-dependent protein 35.6 40 0.0014 21.3 3.3 22 2-23 10-31 (67)
380 3uc1_A DNA gyrase subunit A; D 35.6 2.1E+02 0.0072 24.5 14.3 113 261-376 108-230 (327)
381 3no0_A DNA gyrase subunit A; D 35.4 1.9E+02 0.0066 24.0 13.9 109 261-376 79-198 (276)
382 3viq_B Mating-type switching p 34.9 86 0.0029 20.9 4.9 30 5-34 3-32 (85)
383 3m48_A General control protein 34.8 53 0.0018 17.3 4.2 29 5-33 2-30 (33)
384 4fm3_A Uncharacterized hypothe 34.3 74 0.0025 21.9 4.7 31 5-35 66-96 (98)
385 2rh2_A Dihydrofolate reductase 33.7 17 0.00057 21.2 1.2 33 347-379 30-62 (62)
386 4dzn_A Coiled-coil peptide CC- 32.7 51 0.0017 16.5 4.5 25 5-29 4-28 (33)
387 1uo4_A General control protein 32.3 60 0.002 17.2 4.3 29 5-33 3-31 (34)
388 1sqj_A OXG-RCBH, oligoxylogluc 31.8 3.8E+02 0.013 26.3 16.7 162 158-323 14-196 (789)
389 1t2k_D Cyclic-AMP-dependent tr 31.5 53 0.0018 20.2 3.4 26 7-32 33-58 (61)
390 3zwh_Q Myosin-9; Ca-binding pr 31.1 37 0.0013 19.5 2.3 25 2-26 5-29 (45)
391 3ra3_B P2F; coiled coil domain 30.0 52 0.0018 15.8 3.4 24 5-28 2-25 (28)
392 2l5g_B Putative uncharacterize 29.7 79 0.0027 17.8 4.6 25 5-29 11-35 (42)
393 1use_A VAsp, vasodilator-stimu 29.4 69 0.0024 18.3 3.2 9 21-29 19-27 (45)
394 2wq1_A General control protein 28.8 69 0.0024 16.8 4.6 29 5-33 2-30 (33)
395 1jcd_A Major outer membrane li 28.6 65 0.0022 19.2 3.2 27 4-30 5-31 (52)
396 3sjb_C Golgi to ER traffic pro 27.9 1E+02 0.0036 20.8 4.5 27 6-32 52-78 (93)
397 3b7f_A Glycosyl hydrolase, BNR 27.8 3E+02 0.01 23.9 22.4 99 252-353 178-287 (394)
398 1hjb_A Ccaat/enhancer binding 27.7 1.1E+02 0.0036 20.6 4.5 32 4-35 44-75 (87)
399 2wg5_A General control protein 27.3 68 0.0023 22.5 3.8 27 5-31 9-35 (109)
400 3mez_B Mannose-specific lectin 27.1 1.6E+02 0.0055 20.5 7.9 10 316-325 64-73 (113)
401 3efg_A Protein SLYX homolog; x 25.9 1.2E+02 0.004 19.8 4.5 30 5-34 30-59 (78)
402 1zme_C Proline utilization tra 25.9 53 0.0018 20.5 2.8 18 5-22 46-63 (70)
403 1g6u_A Domain swapped dimer; d 25.8 88 0.003 17.1 3.8 17 12-28 22-38 (48)
404 3c3g_A Alpha/beta peptide with 25.3 82 0.0028 16.5 4.6 28 5-32 2-29 (33)
405 4hvt_A Ritya.17583.B, post-pro 25.1 4.7E+02 0.016 25.3 21.4 241 117-373 137-429 (711)
406 3mq7_A Bone marrow stromal ant 25.1 87 0.003 22.1 3.8 27 5-31 73-99 (121)
407 1ci6_A Transcription factor AT 24.9 57 0.0019 20.3 2.7 28 5-32 32-59 (63)
408 3q6k_A 43.2 kDa salivary prote 24.9 3.6E+02 0.012 23.8 20.2 196 69-268 88-341 (381)
409 3nmd_A CGMP dependent protein 24.8 77 0.0026 20.3 3.2 11 18-28 41-51 (72)
410 2z5i_A TM, general control pro 24.7 1.2E+02 0.004 18.0 4.5 29 4-32 13-41 (52)
411 3al9_A Plexin-A2; beta-propell 24.4 97 0.0033 28.9 5.3 68 300-369 402-476 (539)
412 1olz_A Semaphorin 4D; developm 23.6 2.1E+02 0.0071 27.5 7.5 68 300-369 399-477 (663)
413 1gu4_A CAAT/enhancer binding p 23.0 1.4E+02 0.005 19.4 4.4 29 5-33 45-73 (78)
414 1q47_A Semaphorin 3A; beta pro 22.7 1.9E+02 0.0064 26.6 6.8 68 300-369 406-487 (495)
415 2lw1_A ABC transporter ATP-bin 22.5 1.4E+02 0.0049 19.8 4.6 31 8-38 20-50 (89)
416 3al9_A Plexin-A2; beta-propell 22.2 2.2E+02 0.0076 26.5 7.3 69 252-323 401-476 (539)
417 4gz8_A Semaphorin-3A; multi-do 22.2 2.2E+02 0.0077 27.3 7.4 57 311-369 431-495 (667)
418 1p9i_A Cortexillin I/GCN4 hybr 22.1 84 0.0029 15.5 2.7 22 12-33 4-25 (31)
419 3cvf_A Homer-3, homer protein 22.0 1.7E+02 0.0057 19.2 4.5 27 3-29 13-39 (79)
420 3vmx_A Voltage-gated hydrogen 21.2 1.2E+02 0.0041 17.6 3.2 27 6-32 14-40 (48)
421 2aze_A Transcription factor DP 21.0 2.2E+02 0.0076 21.4 5.6 23 5-27 7-29 (155)
422 1q47_A Semaphorin 3A; beta pro 20.9 3.4E+02 0.012 24.9 8.2 57 220-276 422-487 (495)
423 2dgc_A Protein (GCN4); basic d 20.8 1.6E+02 0.0055 18.2 4.3 27 6-32 33-59 (63)
424 1nkp_B MAX protein, MYC proto- 20.7 1.7E+02 0.0059 19.1 4.6 28 6-33 50-77 (83)
425 2r2v_A GCN4 leucine zipper; co 20.5 1.1E+02 0.0037 16.2 4.6 29 5-33 3-31 (34)
426 3ljm_A Coil Ser L9C; de novo d 20.4 93 0.0032 15.3 4.1 23 7-29 5-27 (31)
427 2wuj_A Septum site-determining 20.3 1.1E+02 0.0038 18.5 3.3 24 9-32 26-49 (57)
428 2d8d_A Aroag, phospho-2-dehydr 20.0 1.7E+02 0.0058 19.4 4.6 27 1-27 1-27 (90)
No 1
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.7e-64 Score=460.42 Aligned_cols=374 Identities=79% Similarity=1.333 Sum_probs=329.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhcccccCCCCCCccCCcceeEeeccccccccEEEEEeeCCCCeEE
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIV 83 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~v~~~~~~~~~~~l~ 83 (379)
+++|++|+++.+...++.+++++.+.|+.+++.+...+..........+.|.+..+.++|.||.+.|++++|+|++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~ 82 (380)
T 3iz6_a 3 SVAELKEKHAAATASVNSLRERLRQRRQTLLDTDVEKYSKAQGRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIV 82 (380)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCSCHHHHGGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHhhhcccccccccccceeEEeecccccccEEEEEEEcCCCCEEE
Confidence 45677777777888888999999988888877776666555555566678888899999999999999999999999999
Q ss_pred EEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEE
Q 016974 84 SASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSC 163 (379)
Q Consensus 84 s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~ 163 (379)
|||.|++|+|||..+++....++.|...|.+++|+|+|++|++++.|+.+++|++.......+..+..+.+.+|.+.|.+
T Consensus 83 s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~ 162 (380)
T 3iz6_a 83 SASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS 162 (380)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC
T ss_pred EEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999998755445555666778999999999
Q ss_pred EEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccce
Q 016974 164 CQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAV 243 (379)
Q Consensus 164 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~ 243 (379)
+.|.|+++..|++|+.|++|++||+.++.....+......+|...|.++.+++.++++|++|+.|+.|++||++.....+
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV 242 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 99999877789999999999999999998887776666678999999999998788999999999999999998666778
Q ss_pred EEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC--CCCCCCeEEEEEccCCCEEEEEEecCcE
Q 016974 244 RTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG--ENEIPHVTSIAFSISGRLLFAGYSNGDC 321 (379)
Q Consensus 244 ~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~fs~~g~~l~sg~~dg~i 321 (379)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+++++.+..+..... ..+...|++++|+|+|++|++|+.||.|
T Consensus 243 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i 322 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDC 322 (380)
T ss_dssp EEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCE
T ss_pred EEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCE
Confidence 88999999999999999999999999999999999999988776643221 2233458999999999999999999999
Q ss_pred EEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCceee
Q 016974 322 YVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGGYRR 377 (379)
Q Consensus 322 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~~~~ 377 (379)
++||...++....+.....+|.+.|++++|+|||++|++||.|++|+||++.+.++
T Consensus 323 ~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 323 YVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred EEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 99999888887777666678999999999999999999999999999999987543
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.6e-55 Score=395.97 Aligned_cols=338 Identities=47% Similarity=0.945 Sum_probs=283.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcchhcccccCCCCCCccCCcceeEeeccccccccEEEEEeeCCCCeEEEEcCCCc
Q 016974 11 RHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGR 90 (379)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~ 90 (379)
+..++++++++|++++.+.|+++.+..+........ ...........+|.||.+.|++++|+|++++|+||+.||+
T Consensus 3 e~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~ 78 (340)
T 1got_B 3 ELDQLRQEAEQLKNQIRDARKACADATLSQITNNID----PVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGK 78 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHTTTSC----CCCCCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchhHHhhcCCC----ccccccchhheeecCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 334455556666677777776655443322211111 1112234566789999999999999999999999999999
Q ss_pred EEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC
Q 016974 91 LIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE 170 (379)
Q Consensus 91 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 170 (379)
|++||..+++....+..+...|.+++|+|+|+++++++.|+.+++|++.... +.......+.+|.+.|.++.|++++
T Consensus 79 v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~ 155 (340)
T 1got_B 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE---GNVRVSRELAGHTGYLSCCRFLDDN 155 (340)
T ss_dssp EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS---BSCEEEEEEECCSSCEEEEEEEETT
T ss_pred EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC---CcceeEEEecCCCccEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999987532 2233456778999999999999864
Q ss_pred CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEeccc
Q 016974 171 DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHE 250 (379)
Q Consensus 171 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~ 250 (379)
.+++++.|++|++||+.++.....+ .+|...|.+++++| +++++++|+.|+.|++||++.. .....+.+|.
T Consensus 156 --~l~s~s~d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~-~~~~~~~~h~ 226 (340)
T 1got_B 156 --QIVTSSGDTTCALWDIETGQQTTTF-----TGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREG-MCRQTFTGHE 226 (340)
T ss_dssp --EEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTC-SEEEEECCCS
T ss_pred --cEEEEECCCcEEEEECCCCcEEEEE-----cCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCC-eeEEEEcCCc
Confidence 5999999999999999998877666 57999999999997 6789999999999999999865 5677889999
Q ss_pred CCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCce
Q 016974 251 GDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAK 330 (379)
Q Consensus 251 ~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~ 330 (379)
..|++++|+|++++|++|+.|++|++||+++++.+..+.. ......|.+++|+|+|++|++|+.||.|++||...++
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc---CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 9999999999999999999999999999998877655421 2233469999999999999999999999999998887
Q ss_pred EEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEe
Q 016974 331 VVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 331 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
....+ .+|.++|.+++|+|||++|||||.|++|+||+
T Consensus 304 ~~~~~----~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 304 RAGVL----AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEE----ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EeeEe----ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 77666 68999999999999999999999999999996
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-54 Score=393.79 Aligned_cols=344 Identities=41% Similarity=0.847 Sum_probs=289.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhcccccCCCCCCccCCcceeEeeccccccccEEEEEeeCCCCeEEEEcCC
Q 016974 9 KERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQD 88 (379)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D 88 (379)
++++..+.++.+.|+.++...|....+..+....+... .+........++|.||.+.|++++|+|++++|+|||.|
T Consensus 10 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~D 85 (354)
T 2pbi_B 10 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVE----ALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQD 85 (354)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTTTSC----CCCCCCCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhccCCc----cccccccEEEEEecCCCCeEEEEEECCCCCEEEEEeCC
Confidence 34556666677778888877777766555544322211 12233345678899999999999999999999999999
Q ss_pred CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEec
Q 016974 89 GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVP 168 (379)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 168 (379)
|+|++||..+++..+.+..+..+|.+++|+|+|.++++++.|+.+++|++...... ........+.+|.+.|.++.|+|
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~ 164 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE-NMAAKKKSVAMHTNYLSACSFTN 164 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC-CSGGGCEEEEECSSCEEEEEECS
T ss_pred CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc-cccccceeeeccCCcEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999998754221 12233456778999999999999
Q ss_pred CCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC-CCcEEEEecCCCcEEEEEccCCccceEEEe
Q 016974 169 DEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS-NSRMFVSGSCDSTARLWDTRVASRAVRTFH 247 (379)
Q Consensus 169 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~ 247 (379)
++ ..|++++.|++|++||+.++.....+ .+|...|.++.+++. ++++|++|+.|+.|++||++.. +.+..+.
T Consensus 165 ~~-~~l~t~s~D~~v~lwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-~~~~~~~ 237 (354)
T 2pbi_B 165 SD-MQILTASGDGTCALWDVESGQLLQSF-----HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-QCVQAFE 237 (354)
T ss_dssp SS-SEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC-CEEEEEC
T ss_pred CC-CEEEEEeCCCcEEEEeCCCCeEEEEE-----cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-cEEEEec
Confidence 75 57999999999999999998877666 578899999999875 4579999999999999999865 5677889
Q ss_pred cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 248 GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 248 ~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
+|...|++++|+|++.+|++|+.|++|++||+++++.+..+.. ......+.+++|+|+|++|++|+.|+.|++||+.
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~---~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK---ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC---CCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 9999999999999999999999999999999998876655432 2223468999999999999999999999999998
Q ss_pred CceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEe
Q 016974 328 LAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 328 ~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
+++.+..+ .+|.+.|++++|+|||++|++||.|++|+||+
T Consensus 315 ~~~~~~~l----~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 315 KGSRVSIL----FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TCSEEEEE----CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCceEEEE----ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 88777665 67999999999999999999999999999996
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-52 Score=389.90 Aligned_cols=289 Identities=25% Similarity=0.409 Sum_probs=260.6
Q ss_pred eeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcC
Q 016974 60 CRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 60 ~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~ 139 (379)
..++.||.++|++++|+|++++|+||+.||+|+|||+.+++....+..|...|.+++|+|+|++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCC
Q 016974 140 SPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNS 219 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 219 (379)
.. .....+.+|...|.+++|+|++ .+|++|+.|++|++||+.++.+...+ .+|...+.++.+++ ++
T Consensus 181 ~~-------~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~-~g 246 (410)
T 1vyh_C 181 GF-------ECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTF-----TGHREWVRMVRPNQ-DG 246 (410)
T ss_dssp SS-------CEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECT-TS
T ss_pred CC-------ceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEE-----eCCCccEEEEEECC-CC
Confidence 42 2456778999999999999975 58999999999999999998877666 57889999999986 67
Q ss_pred cEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccC--------------------CCEEEEeeCCCeEEEEEC
Q 016974 220 RMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPD--------------------GNRFGTGSDDGTCRLFDI 279 (379)
Q Consensus 220 ~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~--------------------g~~l~s~s~D~~i~iwd~ 279 (379)
.++++|+.|+.|++||++.. .....+.+|...|.+++|+|+ |.+|++|+.|++|++||+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~ 325 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325 (410)
T ss_dssp SEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence 89999999999999999865 566788999999999999996 678999999999999999
Q ss_pred CCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEE
Q 016974 280 RTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALC 359 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~ 359 (379)
+++..+..+.. +...|.+++|+|+|++|++|+.||.|++||..+++....+ .+|...|++++|+|++.+|+
T Consensus 326 ~~~~~~~~~~~-----h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 326 STGMCLMTLVG-----HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL----NAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp TTTEEEEEEEC-----CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE----ECCSSCEEEEEECSSSSCEE
T ss_pred CCCceEEEEEC-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE----cCCCCcEEEEEEcCCCCEEE
Confidence 99987766643 2346999999999999999999999999999887766665 57999999999999999999
Q ss_pred EeeCCCcEEEEec
Q 016974 360 TGSWDTNLKIWAF 372 (379)
Q Consensus 360 s~s~D~~i~vw~~ 372 (379)
+||.|++|+||++
T Consensus 397 sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 397 TGSVDQTVKVWEC 409 (410)
T ss_dssp EEETTSEEEEEC-
T ss_pred EEeCCCcEEEEeC
Confidence 9999999999986
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=356.82 Aligned_cols=291 Identities=18% Similarity=0.311 Sum_probs=254.5
Q ss_pred eEeeccccccccEEEEEeeCC----CCeEEEEcCCCcEEEEECCCCce--eeEeecCCcceEEEEECCCCCEEEEeeCCC
Q 016974 58 VCCRTLQGHAGKVYSLDWTSE----RNRIVSASQDGRLIVWNALTSQK--THAIKLPCAWVMTCAFSPTGQSVACGGLDS 131 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~----~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 131 (379)
...+.+++|.+.|++++|+|+ +.+|+|||.|++|+|||+.+++. ...+.+|...|.+++|+|++.++++++.|+
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 345678899999999999975 56899999999999999877654 345788999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEE
Q 016974 132 VCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 211 (379)
Q Consensus 132 ~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
+|++||+.... ....+..|...+.+++|+|++ .+|++|+.|+.|++||+.++.....+ ..|...+.+
T Consensus 103 ~i~lWd~~~~~-------~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~-----~~~~~~v~~ 169 (321)
T 3ow8_A 103 HIRLWDLENGK-------QIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSL-----DTRGKFILS 169 (321)
T ss_dssp EEEEEETTTTE-------EEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEE-----ECSSSCEEE
T ss_pred cEEEEECCCCC-------EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEe-----cCCCceEEE
Confidence 99999987532 345567788889999999975 68999999999999999988766555 457778999
Q ss_pred EEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeec
Q 016974 212 VSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQ 291 (379)
Q Consensus 212 ~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 291 (379)
++++| ++++|++|+.|+.|++||++.. +.+..+.+|..+|.+++|+|++++|++|+.|++|++||++++.....+..
T Consensus 170 ~~~sp-dg~~lasg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~- 246 (321)
T 3ow8_A 170 IAYSP-DGKYLASGAIDGIINIFDIATG-KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG- 246 (321)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-
T ss_pred EEECC-CCCEEEEEcCCCeEEEEECCCC-cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-
Confidence 99997 6789999999999999999865 67788999999999999999999999999999999999998877665532
Q ss_pred cCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEe
Q 016974 292 HGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 292 ~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
+...|.+++|+|+|++|++|+.||+|++||+.+++.+.++ .+|.+.|.+++|+|+++.|++++.|++|+||+
T Consensus 247 ----h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~----~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 247 ----HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF----FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp ----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred ----CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE----cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 3456999999999999999999999999999998888776 57999999999999999999999999999999
Q ss_pred c
Q 016974 372 F 372 (379)
Q Consensus 372 ~ 372 (379)
+
T Consensus 319 ~ 319 (321)
T 3ow8_A 319 C 319 (321)
T ss_dssp C
T ss_pred C
Confidence 6
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.2e-49 Score=351.73 Aligned_cols=293 Identities=22% Similarity=0.364 Sum_probs=253.7
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
..++|.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..+...+.+++|+|++++|++++.|+.|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeE-EEecCccccCCccCeEEEEEeCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRT-SVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
.... ....+.+|.+.|.+++|+|++ .+|++|+.|++|++||++++... ..+ .+|...|.+++|+|.
T Consensus 85 ~~~~-------~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~-----~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 85 NTGE-------KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTF-----EGHEHFVMCVAFNPK 151 (304)
T ss_dssp TTCC-------EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEE-----CCCCSCEEEEEECTT
T ss_pred CCCc-------EEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhh-----cccCCcEEEEEECCC
Confidence 7532 456688999999999999975 58999999999999999877333 333 579999999999987
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEcc--CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP--DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
++.+|++|+.|+.|++||++..........+|...|..+.|+| ++.+|++|+.|++|++||+++++.+..+..
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~----- 226 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG----- 226 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC-----
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC-----
Confidence 7889999999999999999866544444556778899999987 778999999999999999999887776643
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCC--eEEEeeCCCcEEEEecC
Q 016974 296 EIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGS--ALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 296 ~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~--~l~s~s~D~~i~vw~~~ 373 (379)
+...|.+++|+|++++|++|+.||+|++||..+++...++ ..|...+.+++|+|++. ++|+|+. ..+.+|++.
T Consensus 227 h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~asg~~-~g~~~~~~~ 301 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL----NVGLERSWCIATHPTGRKNYIASGFD-NGFTVLSLG 301 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE----CCSSSSEEEEEECTTCGGGCEEEEET-TEEEEEECC
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec----cCCCccEEEEEECCCCCceEEEEecC-CceEEEEec
Confidence 2346999999999999999999999999999998888777 56888999999999875 5776665 456777765
Q ss_pred c
Q 016974 374 G 374 (379)
Q Consensus 374 ~ 374 (379)
.
T Consensus 302 ~ 302 (304)
T 2ynn_A 302 N 302 (304)
T ss_dssp -
T ss_pred c
Confidence 4
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-48 Score=348.83 Aligned_cols=296 Identities=24% Similarity=0.353 Sum_probs=250.1
Q ss_pred ceeEeeccccccccEEEEEeeCCC-CeEEEEcCCCcEEEEECCC-----CceeeEeecCCcceEEEEECCCCCEEEEeeC
Q 016974 56 DLVCCRTLQGHAGKVYSLDWTSER-NRIVSASQDGRLIVWNALT-----SQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 129 (379)
Q Consensus 56 ~~~~~~~l~gH~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 129 (379)
.+....+|.||.+.|++++|+|++ ++|+|||.|++|++||+.. +..+..+..|...|.+++|+|+|++|++++.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 345667899999999999999965 7999999999999999854 2345678899999999999999999999999
Q ss_pred CCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCe
Q 016974 130 DSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADV 209 (379)
Q Consensus 130 d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 209 (379)
|++|++||+.+.. ....+.+|...|.+++|+|++ ..|++|+.|++|++||+... ....+ .+|...+
T Consensus 86 D~~v~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~-~~~~~-----~~h~~~v 151 (319)
T 3frx_A 86 DKTLRLWDVATGE-------TYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ-CLATL-----LGHNDWV 151 (319)
T ss_dssp TSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC-EEEEE-----CCCSSCE
T ss_pred CCEEEEEECCCCC-------eeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-eEEEE-----eccCCcE
Confidence 9999999987532 456788999999999999975 68999999999999999754 33333 5788999
Q ss_pred EEEEEeCC-----CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce
Q 016974 210 LSVSISGS-----NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 284 (379)
Q Consensus 210 ~~~~~~~~-----~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~ 284 (379)
.++.+.|. ++.++++++.|+.|++||++.. +....+.+|...|++++|+|+|++|++|+.|++|++||+++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTT-EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 99999874 3448999999999999999865 56677889999999999999999999999999999999999887
Q ss_pred eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccc----ccCCccCceeEEEECCCCCeEEE
Q 016974 285 LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGS----LQNSHEGRITCLGLSADGSALCT 360 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~----~~~~h~~~v~~~~~s~d~~~l~s 360 (379)
+..+.. ...|.+++|+|+|.+|+++..+ .+++|++........+.. ....|...+.+++|+|||++|++
T Consensus 231 ~~~~~~------~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 231 MYTLSA------QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp EEEEEC------CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred EEEecC------CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 766532 1359999999999999988755 599999877665554422 12346678999999999999999
Q ss_pred eeCCCcEEEEecC
Q 016974 361 GSWDTNLKIWAFG 373 (379)
Q Consensus 361 ~s~D~~i~vw~~~ 373 (379)
|+.|++|+||++.
T Consensus 304 g~~Dg~i~vWd~~ 316 (319)
T 3frx_A 304 GYTDNVIRVWQVM 316 (319)
T ss_dssp EETTSCEEEEEEE
T ss_pred eecCceEEEEEEe
Confidence 9999999999974
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=354.55 Aligned_cols=308 Identities=20% Similarity=0.316 Sum_probs=247.5
Q ss_pred eeEeeccccccc-cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeE---eecCCcceEEEEECCCCCEEEEeeCCCc
Q 016974 57 LVCCRTLQGHAG-KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHA---IKLPCAWVMTCAFSPTGQSVACGGLDSV 132 (379)
Q Consensus 57 ~~~~~~l~gH~~-~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~---~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 132 (379)
+.+..+|.+|.+ .|++++|+|++++||||+.|++|+|||+.++..... ...|...|.+++|+|+|++|++++.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 456778999998 999999999999999999999999999987754322 2568889999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
+++|++... .......+.+|.+.|.+++|+|++ .+|++|+.|++|++||+.++...... ....+|...|.++
T Consensus 85 v~iw~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~--~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 85 TCIWKKNQD-----DFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECV--SVLNSHTQDVKHV 156 (345)
T ss_dssp EEEEEECCC------EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEE--EEECCCCSCEEEE
T ss_pred EEEEEccCC-----CeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEE--EEecCcCCCeEEE
Confidence 999998742 223456788999999999999975 68999999999999999875322111 1125788999999
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCc-cceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce-------
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ------- 284 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~------- 284 (379)
+|+| ++.+|++|+.|+.|++||.+... .....+.+|...|++++|+|+|++|++++.|++|++||......
T Consensus 157 ~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 157 VWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp EECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred EECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 9997 66789999999999999987543 23467889999999999999999999999999999999643211
Q ss_pred --------eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE-----EEecccccCCccCceeEEEE
Q 016974 285 --------LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV-----VLNLGSLQNSHEGRITCLGL 351 (379)
Q Consensus 285 --------~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~-----~~~~~~~~~~h~~~v~~~~~ 351 (379)
+..+. ..+...|.+++|+|++.+|++++.|+.|++|+...... .........+|...|++++|
T Consensus 236 ~~~~~~~~~~~~~----~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 311 (345)
T 3fm0_A 236 GSDPSWKCICTLS----GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAW 311 (345)
T ss_dssp ---CEEEEEEEEC----SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEE
T ss_pred ccCCccceeEEec----CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEE
Confidence 11111 11345799999999999999999999999999654320 00011122579999999999
Q ss_pred CCCC-CeEEEeeCCCcEEEEecCceee
Q 016974 352 SADG-SALCTGSWDTNLKIWAFGGYRR 377 (379)
Q Consensus 352 s~d~-~~l~s~s~D~~i~vw~~~~~~~ 377 (379)
+|++ .+|||||.||+|++|++....+
T Consensus 312 ~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 312 NPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp CSSSTTEEEEEETTSCEEEEEECC---
T ss_pred eCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 9998 5999999999999999887544
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-47 Score=345.62 Aligned_cols=306 Identities=21% Similarity=0.299 Sum_probs=233.0
Q ss_pred eEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc--eeeEe-ec-CCcceEEEEECCCCCEEEEeeCCCcE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ--KTHAI-KL-PCAWVMTCAFSPTGQSVACGGLDSVC 133 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~-~~-~~~~v~~~~~s~~g~~l~~~~~d~~i 133 (379)
.+..+|.+|.++|++++|+|+ +|++|+.|++|++||+.++. ....+ .. |...|.+++|+|++++|++++.|++|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 456789999999999999987 99999999999999998753 34444 33 88899999999999999999999999
Q ss_pred EEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCC----eeEEEecCccccCCccCe
Q 016974 134 SIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG----LRTSVFGGEFQSGHTADV 209 (379)
Q Consensus 134 ~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~~~~~~h~~~v 209 (379)
+||++...............+.+|.+.|.+++|+|++ .+|++|+.|++|++||+... .....+ .+|...|
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~-----~~h~~~v 156 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVL-----QEHSQDV 156 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEE-----CCCSSCE
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEe-----ccCCCce
Confidence 9999864321111223456788999999999999975 68999999999999999532 233333 5799999
Q ss_pred EEEEEeCCCCcEEEEecCCCcEEEEEccCCc-cceEEEecccCCeeEEEEccC--CCEEEEeeCCCeEEEEECCCCce--
Q 016974 210 LSVSISGSNSRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVNTVKFFPD--GNRFGTGSDDGTCRLFDIRTGHQ-- 284 (379)
Q Consensus 210 ~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~~h~~~v~~v~~sp~--g~~l~s~s~D~~i~iwd~~~~~~-- 284 (379)
.++.|+| ++.+|++|+.|+.|++||..... ..+..+.+|...|.+++|+|+ +.+|++|+.|++|++||++++..
T Consensus 157 ~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 157 KHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp EEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred EEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 9999997 67799999999999999986432 456788999999999999998 77899999999999999875411
Q ss_pred --eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccC-ceeEEEECC--CCCeEE
Q 016974 285 --LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEG-RITCLGLSA--DGSALC 359 (379)
Q Consensus 285 --~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~~s~--d~~~l~ 359 (379)
...........+...|.+++|++++ +|++|+.||.|++||...+...... ....+|.. .|.+++|+| ++++||
T Consensus 236 ~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~-~~~~~h~~~~v~~v~~~~~~~~~~la 313 (330)
T 2hes_X 236 QQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFA-KRALCHGVYEINVVKWLELNGKTILA 313 (330)
T ss_dssp CEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEE-EESCTTTTSCEEEEEEC-----CCEE
T ss_pred cceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEe-ccccccccceEEEEEEecCCCceEEE
Confidence 0000011111134579999999765 8999999999999998765321111 11146776 899999999 789999
Q ss_pred EeeCCCcEEEEecCc
Q 016974 360 TGSWDTNLKIWAFGG 374 (379)
Q Consensus 360 s~s~D~~i~vw~~~~ 374 (379)
+||.||+|+||++..
T Consensus 314 s~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 314 TGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTSEEEEEEC--
T ss_pred EecCCCcEEEEEecc
Confidence 999999999999864
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.9e-47 Score=338.05 Aligned_cols=297 Identities=22% Similarity=0.400 Sum_probs=254.4
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
.....++.||.+.|++++|+|++++|++|+.||+|++|+..+++....+..|...|.+++|+|++++|++++.|+.+++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 216 (379)
|+.... ....+.+|...|.++.|+|++ .+|++|+.|++|++||++++.....+ ..|...+.++.+++
T Consensus 93 d~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 93 DVSSGK-------CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTL-----PAHSDPVSAVHFNR 159 (312)
T ss_dssp ETTTCC-------EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECT
T ss_pred ECCCCc-------EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEe-----cCCCCcEEEEEEcC
Confidence 987532 456678999999999999975 68999999999999999988776665 56888999999997
Q ss_pred CCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCC
Q 016974 217 SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENE 296 (379)
Q Consensus 217 ~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 296 (379)
+++++++|+.|+.|++||++...........+...+..++|+|++++|++++.|+.|++||+++++.+..+......
T Consensus 160 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-- 236 (312)
T 4ery_A 160 -DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE-- 236 (312)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS--
T ss_pred -CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc--
Confidence 67799999999999999998654333333456678999999999999999999999999999998877665432211
Q ss_pred CCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEee--CCCcEEEEecC
Q 016974 297 IPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGS--WDTNLKIWAFG 373 (379)
Q Consensus 297 ~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s--~D~~i~vw~~~ 373 (379)
...+......+++++|++|+.||.|++||+.+++.+..+ .+|...|.+++|+|+++.|++++ .|++|++|+.+
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL----QGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE----CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh----hccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 112333334468899999999999999999988877776 67999999999999999999987 69999999865
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4e-47 Score=344.78 Aligned_cols=298 Identities=20% Similarity=0.315 Sum_probs=242.9
Q ss_pred eeEeeccccccccEEEEEe-----eC-CCCeEEEEcCCCcEEEEECCCC-------ceeeEeecCCcceEEEEECCCCCE
Q 016974 57 LVCCRTLQGHAGKVYSLDW-----TS-ERNRIVSASQDGRLIVWNALTS-------QKTHAIKLPCAWVMTCAFSPTGQS 123 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~-----~~-~~~~l~s~s~D~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~g~~ 123 (379)
..+..+|.||.+.|++++| ++ ++++|+|||.|++|++||+.+. .....+..|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 4566789999999999999 76 8999999999999999998753 345667889999999999999999
Q ss_pred EEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCcccc
Q 016974 124 VACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQS 203 (379)
Q Consensus 124 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 203 (379)
+++++.|++|++||+.... ....+.+|...|.+++|+|++ ..|++++.|++|++||+....... . ....
T Consensus 91 l~s~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~-~--~~~~ 159 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGT-------TYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFS-S--AEKE 159 (343)
T ss_dssp EEEEETTSEEEEEETTSSC-------EEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEE-C--CTTT
T ss_pred EEEEcCCCcEEEEECCCCc-------EEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceee-e--eccc
Confidence 9999999999999997532 456678999999999999975 579999999999999997543222 1 1124
Q ss_pred CCccCeEEEEEeCCC---------CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeE
Q 016974 204 GHTADVLSVSISGSN---------SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTC 274 (379)
Q Consensus 204 ~h~~~v~~~~~~~~~---------~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i 274 (379)
.|...+.++.++|.. ..+|++++.|+.|++||.. ......+.+|...|.+++|+|+|++|++|+.|++|
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 688899999998754 2689999999999999954 35567788999999999999999999999999999
Q ss_pred EEEECCCCc-eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEE--eccc-------ccCCccC
Q 016974 275 RLFDIRTGH-QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVL--NLGS-------LQNSHEG 344 (379)
Q Consensus 275 ~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~--~~~~-------~~~~h~~ 344 (379)
++||++... ....+.. ...|.+++|+|+++++++| .|+.|++||+.+.+... .+.. ...+|..
T Consensus 238 ~iwd~~~~~~~~~~~~~------~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (343)
T 2xzm_R 238 LIWDILNLTYPQREFDA------GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP 310 (343)
T ss_dssp EEEESSCCSSCSEEEEC------SSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC
T ss_pred EEEECCCCcccceeecC------CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC
Confidence 999995433 3322211 1259999999999988755 67889999987654321 2210 0126888
Q ss_pred ceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 345 RITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 345 ~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.|.+++|+|+|++|++|+.||+|++|++..
T Consensus 311 ~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 311 QCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred ceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 999999999999999999999999999753
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.4e-47 Score=344.11 Aligned_cols=289 Identities=18% Similarity=0.200 Sum_probs=231.9
Q ss_pred ccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCC-----------ceeeEeecCCcceEEEEECCCCCEEEEeeCCCc
Q 016974 64 QGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTS-----------QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV 132 (379)
Q Consensus 64 ~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-----------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 132 (379)
..|...|.+++|+|||++|++++ |+++|+||.... ........+...|.+++|+|++ .+++++.|++
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 45778899999999999999887 778888873210 0011112234569999999985 6789999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
|+|||+...... ......+.+|.+.|++++|+|++ .+|++|+.|++|++||+.++.....+ .+|...|.++
T Consensus 105 v~lWd~~~~~~~---~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~-----~~h~~~V~~~ 175 (344)
T 4gqb_B 105 VELWELDENETL---IVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSY-----RAHAAQVTCV 175 (344)
T ss_dssp EEEEEECTTSSC---EEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEEE
T ss_pred EEEEeccCCCce---eEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEE-----cCcCCceEEE
Confidence 999999764311 11233456899999999999975 68999999999999999999887776 6899999999
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCccceEEE--ecccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECCCCceeEEEe
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF--HGHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIRTGHQLQVYY 289 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~--~~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~~~~~~~~~~ 289 (379)
.|++.+..+|++|+.|+.|++||++.. +....+ ..|...+.+++|+| ++++|++|+.|++|++||+++++.+..+.
T Consensus 176 ~~~~~~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~ 254 (344)
T 4gqb_B 176 AASPHKDSVFLSCSEDNRILLWDTRCP-KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA 254 (344)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTSS-SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE
T ss_pred EecCCCCCceeeecccccccccccccc-ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc
Confidence 999877789999999999999999865 344443 34566799999999 46788999999999999999998877664
Q ss_pred eccCCCCCCCeEEEEEccCC-CEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCC-eEEEeeCCCcE
Q 016974 290 QQHGENEIPHVTSIAFSISG-RLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGS-ALCTGSWDTNL 367 (379)
Q Consensus 290 ~~~~~~~~~~v~~~~fs~~g-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~s~s~D~~i 367 (379)
. +...|++++|+|+| ++|++|+.||+|+|||..+++... + .+|.+.|++++|+|+++ +|+|+|.|++|
T Consensus 255 ~-----h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~----~~H~~~V~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 255 V-----HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S----QAHRDFVRDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp C-----CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E----CCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred C-----CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E----cCCCCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence 3 23469999999998 589999999999999998877553 3 57999999999999986 56799999999
Q ss_pred EEEecCc
Q 016974 368 KIWAFGG 374 (379)
Q Consensus 368 ~vw~~~~ 374 (379)
++|++..
T Consensus 325 ~~w~v~~ 331 (344)
T 4gqb_B 325 VHHVVPT 331 (344)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999865
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-47 Score=347.49 Aligned_cols=292 Identities=18% Similarity=0.264 Sum_probs=235.4
Q ss_pred cccccccEEEEEeeCCCCeEEEEcC------CCcEEEEECCCCcee----eEeecCCcceEEEEECCCCCEEEEeeCCCc
Q 016974 63 LQGHAGKVYSLDWTSERNRIVSASQ------DGRLIVWNALTSQKT----HAIKLPCAWVMTCAFSPTGQSVACGGLDSV 132 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~~l~s~s~------D~~v~iwd~~~~~~~----~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 132 (379)
..+|.+.|++++|+|||++|+|||. |++|++|+..++... .....|...|.+++|+|++.++ +++.|++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCCE
Confidence 4579999999999999999999997 788999998776543 2334577789999999998655 5788999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
|+|||+...... ........+|.+.|.+++|+|++ .+|++|+.|++|++||+.++.....+ .+|...|.++
T Consensus 117 v~lWd~~~~~~~---~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~-----~~h~~~v~~v 187 (357)
T 4g56_B 117 VELWEILEKESL---LVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSY-----NAHSSEVNCV 187 (357)
T ss_dssp EEEC-----------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEEE
T ss_pred EEEeecccccee---EEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEE-----cCCCCCEEEE
Confidence 999998754311 11123455899999999999975 68999999999999999998877766 5799999999
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCccce-EEEecccCCeeEEEEccC-CCEEEEeeCCCeEEEEECCCCceeEEEee
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVASRAV-RTFHGHEGDVNTVKFFPD-GNRFGTGSDDGTCRLFDIRTGHQLQVYYQ 290 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~-~~~~~h~~~v~~v~~sp~-g~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 290 (379)
+|++.+..++++++.|+.|++||++...... ..+..|...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+..
T Consensus 188 ~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~ 267 (357)
T 4g56_B 188 AACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV 267 (357)
T ss_dssp EECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC
T ss_pred EEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec
Confidence 9998776789999999999999998653322 123457778999999997 56889999999999999999887766532
Q ss_pred ccCCCCCCCeEEEEEccCC-CEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECC-CCCeEEEeeCCCcEE
Q 016974 291 QHGENEIPHVTSIAFSISG-RLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSA-DGSALCTGSWDTNLK 368 (379)
Q Consensus 291 ~~~~~~~~~v~~~~fs~~g-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~-d~~~l~s~s~D~~i~ 368 (379)
+...|++++|+|++ ++|++|+.||+|+|||+.+++....+ +|.+.|++++|+| |+++|+|+|.|++|+
T Consensus 268 -----~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-----~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 268 -----HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-----SHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp -----CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-----CCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred -----cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-----CCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 23469999999987 58999999999999999988876554 6999999999998 899999999999999
Q ss_pred EEecCc
Q 016974 369 IWAFGG 374 (379)
Q Consensus 369 vw~~~~ 374 (379)
+|++..
T Consensus 338 iW~~~~ 343 (357)
T 4g56_B 338 HHHLPS 343 (357)
T ss_dssp EEECC-
T ss_pred EEECCC
Confidence 999866
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4e-46 Score=344.49 Aligned_cols=290 Identities=21% Similarity=0.417 Sum_probs=240.3
Q ss_pred cccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCC------------------cceEEEEECCCCCEEEE
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPC------------------AWVMTCAFSPTGQSVAC 126 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~------------------~~v~~~~~s~~g~~l~~ 126 (379)
+|.+.|++++|+|+|++|++|+ |+++++|++.+++.+..+..+. ..|.+++|+|+|++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999987 7899999999998877665432 24899999999999999
Q ss_pred eeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCc
Q 016974 127 GGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHT 206 (379)
Q Consensus 127 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~ 206 (379)
++.|+.|++||+... .....+.+|...|.+++|+|++ ..|++++.|++|++||++++.....+ .+.
T Consensus 141 ~~~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~------~~~ 206 (393)
T 1erj_A 141 GAEDRLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTL------SIE 206 (393)
T ss_dssp EETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEE------ECS
T ss_pred EcCCCeEEEEECCCC-------cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEE------EcC
Confidence 999999999998753 2456788999999999999976 57999999999999999998766554 245
Q ss_pred cCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEE-------ecccCCeeEEEEccCCCEEEEeeCCCeEEEEEC
Q 016974 207 ADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF-------HGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDI 279 (379)
Q Consensus 207 ~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~-------~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~ 279 (379)
..+.+++++|.+++++++|+.|+.|++||++.. ..+..+ .+|...|.+++|+|+|++|++|+.|++|++||+
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG-FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEETTTC-CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC-cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 678999999878899999999999999998765 334444 579999999999999999999999999999999
Q ss_pred CCCceeEEEee-------ccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEEC
Q 016974 280 RTGHQLQVYYQ-------QHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLS 352 (379)
Q Consensus 280 ~~~~~~~~~~~-------~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s 352 (379)
++......... .....+...|.+++|+|++++|++|+.||.|++||..+++....+ .+|.+.|.+++|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l----~~h~~~v~~v~~~ 361 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML----QGHRNSVISVAVA 361 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE----ECCSSCEEEEEEC
T ss_pred CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE----CCCCCCEEEEEec
Confidence 76432110000 000123456999999999999999999999999999988877766 6799999999998
Q ss_pred C------CCCeEEEeeCCCcEEEEecCc
Q 016974 353 A------DGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 353 ~------d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+ ++++||+||.|++|+||++..
T Consensus 362 ~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 362 NGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp SSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 6 688999999999999999865
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.5e-46 Score=363.93 Aligned_cols=298 Identities=20% Similarity=0.334 Sum_probs=243.7
Q ss_pred eccccccccEEEEEeeCCCC-eEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcC
Q 016974 61 RTLQGHAGKVYSLDWTSERN-RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~ 139 (379)
.++.+|.+.|++++|+|+++ .|+||+.|++|++||..+++....+..|...|.+++|+|+|++|++++.|++|++||+.
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 46889999999999999987 59999999999999999888889999999999999999999999999999999999986
Q ss_pred CCCCCCCCcceeeee-------cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC-------------
Q 016974 140 SPTDKDGNLPVSRML-------SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG------------- 199 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~------------- 199 (379)
... ....+ .+|.+.|.+++|+|++ .+|++++.|++|++||+.++.....+..
T Consensus 221 ~g~-------~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 221 DGT-------KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp TCC-------EEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred CCc-------EeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 532 12223 2799999999999975 6899999999999999988765543321
Q ss_pred -------------------------ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccc------------
Q 016974 200 -------------------------EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRA------------ 242 (379)
Q Consensus 200 -------------------------~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~------------ 242 (379)
....+|...|.+++++| +++++++++.|+.|++||+......
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~ 371 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEE
Confidence 01247899999999997 7789999999999999997642110
Q ss_pred ----------------------------------------------------------------------eEEEecccCC
Q 016974 243 ----------------------------------------------------------------------VRTFHGHEGD 252 (379)
Q Consensus 243 ----------------------------------------------------------------------~~~~~~h~~~ 252 (379)
+..+ .|...
T Consensus 372 ~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~ 450 (611)
T 1nr0_A 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYN 450 (611)
T ss_dssp EEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSC
T ss_pred EEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCC
Confidence 0000 13355
Q ss_pred eeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCC-ceE
Q 016974 253 VNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLL-AKV 331 (379)
Q Consensus 253 v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~-~~~ 331 (379)
+.+++|+|||++|++|+.|++|++||+.++......... +...|++++|+|+|++|++++.|++|++||..+ ++.
T Consensus 451 v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~----h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~ 526 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV----HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL 526 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEE----CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred ceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccC----CCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCce
Confidence 789999999999999999999999999876432211111 345699999999999999999999999999876 443
Q ss_pred EEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 332 VLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 332 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
... .....|...|++++|+|||++||+||.|++|+||++..
T Consensus 527 ~~~--~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 527 AHT--NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp SCC--CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred eee--eeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 221 01245999999999999999999999999999999865
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.7e-45 Score=329.66 Aligned_cols=301 Identities=25% Similarity=0.394 Sum_probs=248.4
Q ss_pred CcceeEeeccccccccEEEEEeeCC-CCeEEEEcCCCcEEEEECCCCc-----eeeEeecCCcceEEEEECCCCCEEEEe
Q 016974 54 PTDLVCCRTLQGHAGKVYSLDWTSE-RNRIVSASQDGRLIVWNALTSQ-----KTHAIKLPCAWVMTCAFSPTGQSVACG 127 (379)
Q Consensus 54 ~~~~~~~~~l~gH~~~v~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~~~~~v~~~~~s~~g~~l~~~ 127 (379)
+..+....+|+||.+.|++|+|+|+ +++|+|||.|++|+|||+.+.+ ....+..|...|.+++|+|+|++|+++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3455667789999999999999997 5799999999999999987654 345677889999999999999999999
Q ss_pred eCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCcc
Q 016974 128 GLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA 207 (379)
Q Consensus 128 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~ 207 (379)
+.|+.+++|+..... .......+...+..+.+.+.+ ..|++++.|+.+++||+......... ..+|..
T Consensus 105 ~~d~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~----~~~~~~ 172 (340)
T 4aow_A 105 SWDGTLRLWDLTTGT-------TTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQ----DESHSE 172 (340)
T ss_dssp ETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEEC----SSSCSS
T ss_pred cccccceEEeecccc-------eeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEE----eccccC
Confidence 999999999987532 233445566777888888865 67999999999999999776543332 257888
Q ss_pred CeEEEEEeCCC-CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeE
Q 016974 208 DVLSVSISGSN-SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQ 286 (379)
Q Consensus 208 ~v~~~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~ 286 (379)
.+..+.+.+.. ..++++++.|+.|++||++.. +....+.+|.+.|++++|+|++++|++|+.|++|++||+++.+.+.
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCC-ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee
Confidence 99999887643 457889999999999999865 5677889999999999999999999999999999999999988776
Q ss_pred EEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccc-----ccCCccCceeEEEECCCCCeEEEe
Q 016974 287 VYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGS-----LQNSHEGRITCLGLSADGSALCTG 361 (379)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~-----~~~~h~~~v~~~~~s~d~~~l~s~ 361 (379)
.+.. ...|.+++|+|++.++ +++.|+.|++||+........+.. ....|...|++++|+|||++||+|
T Consensus 252 ~~~~------~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 252 TLDG------GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp EEEC------SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE
T ss_pred eecC------CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE
Confidence 6532 2358999999988665 566799999999987766555431 124688999999999999999999
Q ss_pred eCCCcEEEEecCc
Q 016974 362 SWDTNLKIWAFGG 374 (379)
Q Consensus 362 s~D~~i~vw~~~~ 374 (379)
+.||+|+||++..
T Consensus 325 s~Dg~v~iW~~~t 337 (340)
T 4aow_A 325 YTDNLVRVWQVTI 337 (340)
T ss_dssp ETTSCEEEEEEEC
T ss_pred eCCCEEEEEeCCC
Confidence 9999999999754
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.5e-45 Score=356.16 Aligned_cols=292 Identities=18% Similarity=0.252 Sum_probs=247.2
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc--eeeEeecCCcceEEEEECCCCCEEEEeeCC----Cc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSPTGQSVACGGLD----SV 132 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----~~ 132 (379)
...+|.+|.+.|++++|+|+|++||||+.|++|+|||+.+++ ....+..|...|.+++|+|+|++|++++.+ +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 345788999999999999999999999999999999987544 345677888999999999999999998875 36
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
+++||... ....+.+|...|.+++|+|++...|++|+.|++|++||..++.....+ .+|...|.++
T Consensus 131 v~~wd~~~---------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v 196 (611)
T 1nr0_A 131 VFLFDTGT---------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-----GEHTKFVHSV 196 (611)
T ss_dssp EEETTTCC---------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-----CCCSSCEEEE
T ss_pred EEEeeCCC---------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-----ccccCceEEE
Confidence 77776432 234578999999999999987667999999999999999887766655 5799999999
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCccceEEEe-------cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH-------GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 285 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~-------~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~ 285 (379)
+|+| ++++|++|+.|+.|++||+... +....+. +|.+.|.+++|+|+|++|++++.|++|++||+++++.+
T Consensus 197 ~fsp-dg~~las~s~D~~i~lwd~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 197 RYNP-DGSLFASTGGDGTIVLYNGVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp EECT-TSSEEEEEETTSCEEEEETTTC-CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EECC-CCCEEEEEECCCcEEEEECCCC-cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 9997 6789999999999999998755 4455553 79999999999999999999999999999999998877
Q ss_pred EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC
Q 016974 286 QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
..+.... .....+..+.| +++.+++++.||.+++||...++....+ .+|...|++++|+|||++|++++.|+
T Consensus 275 ~~~~~~~--~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~----~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 275 KTIPVGT--RIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVR----YGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp EEEECCS--SGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeecCCC--CccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEE----cCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 6654321 11223455666 7889999999999999998887765555 68999999999999999999999999
Q ss_pred cEEEEecCc
Q 016974 366 NLKIWAFGG 374 (379)
Q Consensus 366 ~i~vw~~~~ 374 (379)
+|++|++..
T Consensus 347 ~v~~Wd~~~ 355 (611)
T 1nr0_A 347 HINSWDIST 355 (611)
T ss_dssp CEEEEETTT
T ss_pred cEEEEECCC
Confidence 999999864
No 18
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.9e-45 Score=359.68 Aligned_cols=300 Identities=26% Similarity=0.390 Sum_probs=246.7
Q ss_pred eEeeccccccccEEEEEeeCCC-CeEEEEcCCCcEEEEECCCC-----ceeeEeecCCcceEEEEECCCCCEEEEeeCCC
Q 016974 58 VCCRTLQGHAGKVYSLDWTSER-NRIVSASQDGRLIVWNALTS-----QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDS 131 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~-----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 131 (379)
.....|++|.+.|++++|+|++ ++|+|||.|++|++||+.+. .....+..|...|.+++|+|+|++|++++.|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 4456799999999999999875 68999999999999998753 33467788999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEE
Q 016974 132 VCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 211 (379)
Q Consensus 132 ~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
.|+|||+.... ..+.+.+|.+.|.+++|+|++ ..|++|+.|++|++||........... ...+|...|.+
T Consensus 453 ~v~vwd~~~~~-------~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~--~~~~h~~~v~~ 522 (694)
T 3dm0_A 453 ELRLWDLAAGV-------STRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISE--GGEGHRDWVSC 522 (694)
T ss_dssp EEEEEETTTTE-------EEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECS--STTSCSSCEEE
T ss_pred cEEEEECCCCc-------ceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeecc--CCCCCCCcEEE
Confidence 99999987532 456678999999999999975 579999999999999987654333221 12578899999
Q ss_pred EEEeCCC-CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEee
Q 016974 212 VSISGSN-SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQ 290 (379)
Q Consensus 212 ~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 290 (379)
+.+++.. ..++++|+.|+.|++||++.. +....+.+|.+.|++++|+|+|++|++|+.|++|++||+++++.+..+..
T Consensus 523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~ 601 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWDKTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 601 (694)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC
T ss_pred EEEeCCCCcceEEEEeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC
Confidence 9999854 358999999999999999865 56778899999999999999999999999999999999999877654321
Q ss_pred ccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccC---------------CccCceeEEEECCCC
Q 016974 291 QHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQN---------------SHEGRITCLGLSADG 355 (379)
Q Consensus 291 ~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~---------------~h~~~v~~~~~s~d~ 355 (379)
...|.+++|+|++.+|+++. ++.|++||+.+++.+..+..... .+...+++++|+|||
T Consensus 602 ------~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg 674 (694)
T 3dm0_A 602 ------NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG 674 (694)
T ss_dssp ------SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTS
T ss_pred ------CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC
Confidence 23599999999999887765 55699999988877665532100 112247899999999
Q ss_pred CeEEEeeCCCcEEEEecCce
Q 016974 356 SALCTGSWDTNLKIWAFGGY 375 (379)
Q Consensus 356 ~~l~s~s~D~~i~vw~~~~~ 375 (379)
++|++||.||+|+||+++.|
T Consensus 675 ~~l~sgs~Dg~i~iW~i~~~ 694 (694)
T 3dm0_A 675 STLFSGYTDGVIRVWGIGRY 694 (694)
T ss_dssp SEEEEEETTSEEEEEEC---
T ss_pred CEEEEEcCCCeEEEEeccCC
Confidence 99999999999999998764
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.6e-44 Score=345.40 Aligned_cols=283 Identities=28% Similarity=0.518 Sum_probs=246.9
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
....+.+|...|++++|+|+++.|++++.|++|++||.. ++....+..|...+.+++|+|+|+++++++.|+.+++|+.
T Consensus 295 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 295 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 445788999999999999999999999999999999975 5566778888899999999999999999999999999996
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
.. .....+.+|...|.+++|+|++ .+|++++.|+.|++||.. +.....+ .+|...|.+++|+| +
T Consensus 374 ~~--------~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~~~~~~-----~~~~~~v~~~~~s~-d 437 (577)
T 2ymu_A 374 NG--------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTL-----TGHSSSVWGVAFSP-D 437 (577)
T ss_dssp TC--------CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CCEEEEE-----ECCSSCEEEEEECT-T
T ss_pred CC--------CEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CCEEEEe-----cCCCCCeEEEEECC-C
Confidence 42 2455678999999999999975 679999999999999964 4444444 57889999999997 6
Q ss_pred CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCC
Q 016974 219 SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIP 298 (379)
Q Consensus 219 ~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 298 (379)
++++++++.|+.|++||.. .+.+..+.+|...|.+++|+|++++|++++.|++|++||. +++.+..+.. +..
T Consensus 438 ~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~-----h~~ 509 (577)
T 2ymu_A 438 DQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-----HSS 509 (577)
T ss_dssp SSEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC-----CSS
T ss_pred CCEEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC-----CCC
Confidence 7799999999999999964 3567788999999999999999999999999999999995 5666665532 335
Q ss_pred CeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEe
Q 016974 299 HVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 299 ~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
.|++++|+|+|++|++|+.||.|++||. +++.+..+ .+|.+.|++++|+|||++|+|+|.|++|++|+
T Consensus 510 ~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~----~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 510 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL----TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE----ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE----cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 6999999999999999999999999996 55666555 67999999999999999999999999999997
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-43 Score=320.35 Aligned_cols=297 Identities=15% Similarity=0.225 Sum_probs=255.2
Q ss_pred eEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFN 137 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~ 137 (379)
.....|.+|.+.|++++|+|++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-----CeEEEeecCCCeeEEEe---c---CccccCCc
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-----QTCVLWDITTGLRTSVF---G---GEFQSGHT 206 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~---~---~~~~~~h~ 206 (379)
+.... ....+. |...|.++.|+|++ ..+++++.+ +.|.+||+..+.....+ . ......|.
T Consensus 103 ~~~~~-------~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 103 VSNGQ-------CVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp TTTCC-------EEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred CCCCc-------EEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 97532 233333 77889999999975 578888888 99999998764211100 0 00112344
Q ss_pred c--CeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce
Q 016974 207 A--DVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 284 (379)
Q Consensus 207 ~--~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~ 284 (379)
. .+.++++++ +++++++++.||.|++||++.....+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++.
T Consensus 174 ~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 174 GLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp TCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 4 899999997 6778999999999999999875577888899999999999999999999999999999999999887
Q ss_pred eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC--------------cEEEEeCCCceEEEecccccCCccCceeEEE
Q 016974 285 LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG--------------DCYVWDTLLAKVVLNLGSLQNSHEGRITCLG 350 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg--------------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 350 (379)
+..+.. ...+.+++|+|+++++++++.++ .+++||..+++....+ .+|...|.+++
T Consensus 253 ~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~v~~~~ 322 (369)
T 3zwl_B 253 LKKYET------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV----QGHFGPLNTVA 322 (369)
T ss_dssp EEEEEC------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE----ECCSSCEEEEE
T ss_pred eeeecC------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe----ecccCcEEEEE
Confidence 766642 24589999999999999999988 8999999888877766 67899999999
Q ss_pred ECCCCCeEEEeeCCCcEEEEecCc
Q 016974 351 LSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 351 ~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
|+|++++|++++.||+|++|++..
T Consensus 323 ~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 323 ISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEEECH
T ss_pred ECCCCCEEEEEcCCCeEEEEECcc
Confidence 999999999999999999999876
No 21
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-42 Score=308.72 Aligned_cols=288 Identities=22% Similarity=0.352 Sum_probs=249.0
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
.....+|.+|.+.|++++| +++++|++|+.||.|++||+.+++....+..|...+.+++|+|+++++++++.|+.+++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3456789999999999999 899999999999999999999988888899999999999999999999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 216 (379)
++...... .....+.+|...|.++.|. +..+++++.|+.|++|| .+.....+ ..|...+.++.+.+
T Consensus 87 ~~~~~~~~----~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~-----~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 87 PLFATSGE----DPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNL-----QAHNASVWDAKVVS 152 (313)
T ss_dssp ETTCCTTS----CC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEE-----ECCSSCEEEEEEEE
T ss_pred EeeecCCC----CcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEec-----ccCCCceeEEEEcc
Confidence 99764311 2345577899999999993 35899999999999999 44444444 56888999999998
Q ss_pred CCCcEEEEecCCCcEEEEEccCCccceEEEec-ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCC
Q 016974 217 SNSRMFVSGSCDSTARLWDTRVASRAVRTFHG-HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 217 ~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
.+++++++++.|+.|++||.. .....+.. |...|.+++|+|++. +++++.|+.|++||+++++.+..+..
T Consensus 153 ~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~----- 223 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG----- 223 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC-----
T ss_pred CCCCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc-----
Confidence 788899999999999999943 45666766 899999999999998 99999999999999999888776642
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 296 EIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 296 ~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+...|++++|+|+| .|++|+.||.|++||+.+++....+ ..|..+|.+++|+|+++ +++++.|+.|++|++..
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~----~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVI----TLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEE----ECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEE----eccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 23569999999999 5889999999999999988877766 56888999999999998 56799999999999876
No 22
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.2e-43 Score=321.69 Aligned_cols=300 Identities=18% Similarity=0.248 Sum_probs=241.9
Q ss_pred eeEeeccccccccEEEEEeeCCC-CeEEEEcCCCcEEEEECCCCceeeEee--cCCcceEEEEECC-CCCEEEEeeCCCc
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSER-NRIVSASQDGRLIVWNALTSQKTHAIK--LPCAWVMTCAFSP-TGQSVACGGLDSV 132 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~-~g~~l~~~~~d~~ 132 (379)
.....++.+|.+.|++++|+|++ ++|++|+.||+|+|||+.+++....+. .|...|.+++|+| ++++|++++.|+.
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 34556889999999999999998 899999999999999999888877766 4889999999999 7899999999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
+++||+... .........+|...|.+++|+|++ ..|++++.|+.|++||+. +.....+ .+|...|.++
T Consensus 143 i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~-----~~h~~~v~~~ 210 (383)
T 3ei3_B 143 TTLRDFSGS-----VIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLD-GHEIFKE-----KLHKAKVTHA 210 (383)
T ss_dssp EEEEETTSC-----EEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETT-SCEEEEE-----ECSSSCEEEE
T ss_pred EEEEECCCC-----ceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECC-CCEEEEe-----ccCCCcEEEE
Confidence 999999741 111112223455889999999975 689999999999999995 4444444 5788999999
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCC---ccceEEEecccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVA---SRAVRTFHGHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~---~~~~~~~~~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
+|++.+..++++|+.|+.|++||++.. ...+..+ +|...|.+++|+| ++.+|++++.|+.|++||+++++....+
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 999855449999999999999999863 2344444 7999999999999 9999999999999999999987765444
Q ss_pred eeccCC--CC----------CCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCC
Q 016974 289 YQQHGE--NE----------IPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGS 356 (379)
Q Consensus 289 ~~~~~~--~~----------~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~ 356 (379)
...... .+ ...+..++|+|+|++ +|+.||.|++||+.+++.+..+.. ..|.+.+.+++|+|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~--~~~~~~~~~~~~s~~g~ 365 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD--PNAAGIISLNKFSPTGD 365 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB--TTBCSCCCEEEECTTSS
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC--CCCCceEEEEEEecCcc
Confidence 321100 01 123555777777777 778999999999998888777632 23667888889999999
Q ss_pred eEEEeeCCCcEEEEecCc
Q 016974 357 ALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 357 ~l~s~s~D~~i~vw~~~~ 374 (379)
+|++|+ |++|+||++..
T Consensus 366 ~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 366 VLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEEE-TTEEEEEECC-
T ss_pred EEEEec-CCcEEEEecCC
Confidence 999997 99999999864
No 23
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-42 Score=310.45 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=221.4
Q ss_pred ceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC
Q 016974 100 QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG 179 (379)
Q Consensus 100 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 179 (379)
+..+++..|...|.+++|+|++++|++++.|+.+++||+.+. ...+.+.+|...|.++.|+|++ .+|++|+.
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~ 75 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSD 75 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEET
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-------ceeEEeeccCCcEEEEEEeCCC-CEEEEECC
Confidence 345678889999999999999999999999999999998753 2456678899999999999975 68999999
Q ss_pred CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEc
Q 016974 180 DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFF 259 (379)
Q Consensus 180 d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~s 259 (379)
|++|++||+.++.....+ .+|...|.+++++| +++++++|+.|+.|++||++........+.+|...|.+++|+
T Consensus 76 d~~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDF-----EAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (304)
T ss_dssp TSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEEC
T ss_pred CCEEEEEECCCCcEEEEE-----eCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEEC
Confidence 999999999998877666 57999999999997 667899999999999999987656667889999999999999
Q ss_pred c-CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEcc--CCCEEEEEEecCcEEEEeCCCceEEEecc
Q 016974 260 P-DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSI--SGRLLFAGYSNGDCYVWDTLLAKVVLNLG 336 (379)
Q Consensus 260 p-~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~--~g~~l~sg~~dg~i~iwd~~~~~~~~~~~ 336 (379)
| ++.+|++|+.|++|++||++++.....+...+ ...+..+.|+| ++++|++|+.||+|++||+.+++.+.++
T Consensus 150 p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~- 224 (304)
T 2ynn_A 150 PKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ----ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL- 224 (304)
T ss_dssp TTCTTEEEEEETTSEEEEEETTCSSCSEEEECCC----TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE-
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCccceeccCC----cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee-
Confidence 9 68899999999999999998876655443322 23588889986 7789999999999999999998887776
Q ss_pred cccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 337 SLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 337 ~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.+|...|.+++|+|++++|++|+.||+|++|++..
T Consensus 225 ---~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 225 ---EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp ---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred ---CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 67999999999999999999999999999999875
No 24
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.8e-43 Score=323.01 Aligned_cols=310 Identities=18% Similarity=0.247 Sum_probs=252.5
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc------eeeEeecCCcceEEEEECCC----C---CE
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ------KTHAIKLPCAWVMTCAFSPT----G---QS 123 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~------~~~~~~~~~~~v~~~~~s~~----g---~~ 123 (379)
+.....+.+|.+.|++++|+| ++|++|+.||+|++||+.+++ ....+..|...|.+++|+|+ | ++
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 345678999999999999998 799999999999999999887 67888899999999999999 9 99
Q ss_pred EEEeeCCCcEEEEEcCCCCCCCCCcceeeeeccc-----ccceEEEEEe----cCCCce-EEEeeCCCeEEEeecCC---
Q 016974 124 VACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGH-----KGYVSCCQYV----PDEDTH-LITSSGDQTCVLWDITT--- 190 (379)
Q Consensus 124 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~----~~~~~~-l~s~~~d~~i~~wd~~~--- 190 (379)
|++++.|+.|++|++...... .......+.+| ...|.++.|+ |++ .. |++++.|+.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDET--KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTT--CCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSS
T ss_pred EEEEcCCCCEEEEEccCCccc--ccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCcccc
Confidence 999999999999999754321 11124566778 5899999999 875 56 99999999999999987
Q ss_pred ---CeeEE-----EecC--ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEec---c---cCCee
Q 016974 191 ---GLRTS-----VFGG--EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG---H---EGDVN 254 (379)
Q Consensus 191 ---~~~~~-----~~~~--~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~---h---~~~v~ 254 (379)
+.... .+.. .....|...+.++++++ ++ ++++++.|+.|++||++.. +.+..+.+ | ...|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTL-RPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTT-EEEEEEECCC---CCCCCEE
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCC-ceeEEEeccccccccCCccc
Confidence 43332 2210 00134778899999998 45 9999999999999999865 66778888 8 99999
Q ss_pred EEEEccCCCEEEEeeCC---CeEEEEECCCCceeEEEeeccC--------CCCCCCeEEEEEccCCCEEEEEEecCcEEE
Q 016974 255 TVKFFPDGNRFGTGSDD---GTCRLFDIRTGHQLQVYYQQHG--------ENEIPHVTSIAFSISGRLLFAGYSNGDCYV 323 (379)
Q Consensus 255 ~v~~sp~g~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~--------~~~~~~v~~~~fs~~g~~l~sg~~dg~i~i 323 (379)
+++|+|++.+|++++.| +.|++||+++++.+..+..... ..+...|.+++|+|++++|++|+.||.|++
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 99999999999999999 9999999999887766543100 003457999999999999999999999999
Q ss_pred EeCCCceEEEecccc--cCCc---------------cCceeEEEECCCC----------CeEEEeeCCCcEEEEecCc
Q 016974 324 WDTLLAKVVLNLGSL--QNSH---------------EGRITCLGLSADG----------SALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 324 wd~~~~~~~~~~~~~--~~~h---------------~~~v~~~~~s~d~----------~~l~s~s~D~~i~vw~~~~ 374 (379)
||+.+++.+..+... ...| ..+|++++|+|++ ++|++++.||.|++|++..
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 999988877766310 0045 8999999999998 7999999999999999753
No 25
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4e-43 Score=320.95 Aligned_cols=298 Identities=17% Similarity=0.266 Sum_probs=247.5
Q ss_pred cccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc--eeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC
Q 016974 63 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~ 140 (379)
+..|.++|++++|+|++++|++|+.|+.|++||..+++ ....+..|...|.+++|+|++++|++++.|+.+++||+..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45699999999999999999999999999999999887 7888889999999999999999999999999999999964
Q ss_pred CCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCc
Q 016974 141 PTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 141 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 220 (379)
. +......+.+|...|.++.|+|++ .+|++++.|+.|++||+..+...... .....+|...+.++.+++ +++
T Consensus 84 ~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~-~~~~~~~~~~i~~~~~~~-~~~ 155 (372)
T 1k8k_C 84 R-----TWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVC-KHIKKPIRSTVLSLDWHP-NSV 155 (372)
T ss_dssp T-----EEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEE-EEECTTCCSCEEEEEECT-TSS
T ss_pred C-----eeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceee-eeeecccCCCeeEEEEcC-CCC
Confidence 2 122233456789999999999975 68999999999999999876421111 011256888999999997 677
Q ss_pred EEEEecCCCcEEEEEcc-----------------CCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc
Q 016974 221 MFVSGSCDSTARLWDTR-----------------VASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH 283 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~-----------------~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~ 283 (379)
++++++.|+.|++||++ .....+..+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999999999964 1235667788999999999999999999999999999999999998
Q ss_pred eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCC--ceEEE--ec------------------------
Q 016974 284 QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLL--AKVVL--NL------------------------ 335 (379)
Q Consensus 284 ~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~--~~~~~--~~------------------------ 335 (379)
.+..+.. +...|.+++|+|+|++|++| .|+.|++||... +.... .+
T Consensus 236 ~~~~~~~-----~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
T 1k8k_C 236 AVATLAS-----ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 309 (372)
T ss_dssp EEEEEEC-----SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC
T ss_pred eeEEEcc-----CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccc
Confidence 8776643 23469999999999999988 999999999876 42110 00
Q ss_pred ---------ccccCCccCceeEEEEC-CCC---CeEEEeeCCCcEEEEecCc
Q 016974 336 ---------GSLQNSHEGRITCLGLS-ADG---SALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 336 ---------~~~~~~h~~~v~~~~~s-~d~---~~l~s~s~D~~i~vw~~~~ 374 (379)
.....+|..+|++++|. ++| ++|+||+.||+|++|++..
T Consensus 310 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 310 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp ---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 22225899999999966 677 9999999999999999865
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5e-42 Score=332.24 Aligned_cols=287 Identities=28% Similarity=0.485 Sum_probs=249.2
Q ss_pred eEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFN 137 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~ 137 (379)
....++.+|...|.+++|+|+++.|++++.|++|++||. +++....+..|...|.+++|+|+++.+++++.|+.+++||
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 345678899999999999999999999999999999996 4677788888999999999999999999999999999999
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
+... ....+.+|...|.+++|+|++ ..|++++.|++|++||.. +.....+ .+|...|.+++++|
T Consensus 332 ~~~~--------~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~-~~~~~~~-----~~~~~~v~~~~~s~- 395 (577)
T 2ymu_A 332 RNGQ--------HLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTL-----TGHSSSVRGVAFSP- 395 (577)
T ss_dssp TTSC--------EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT-CCEEEEE-----ECCSSCEEEEEECT-
T ss_pred CCCC--------eeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCC-CCEEEEe-----cCCCCCeEEEEECC-
Confidence 7632 234577899999999999975 689999999999999964 4444444 57889999999997
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEI 297 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 297 (379)
+++++++++.|+.|++||.. .+.+..+.+|...|++++|+|++++|++++.|++|++||.. ++.+..+.. +.
T Consensus 396 dg~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~-----~~ 467 (577)
T 2ymu_A 396 DGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTG-----HS 467 (577)
T ss_dssp TSSCEEEEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEEC-----CS
T ss_pred CCCEEEEEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcC-----CC
Confidence 67889999999999999964 35677889999999999999999999999999999999964 555554432 23
Q ss_pred CCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 298 PHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 298 ~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..|.+++|+|+|++|++++.|+.|++||. +++....+ .+|...|++++|+|||++||+++.|++|+||+..+
T Consensus 468 ~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~----~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 468 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL----TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE----ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE----eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 46999999999999999999999999995 56666655 57999999999999999999999999999999765
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.9e-43 Score=315.80 Aligned_cols=248 Identities=21% Similarity=0.240 Sum_probs=208.9
Q ss_pred cccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEe----ecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAI----KLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~----~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~ 140 (379)
.|...|.+++|+|++ .|++|+.||+|+|||+.+++..... ..|...|.+++|+|+|++|++++.|++|++||+..
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 356779999999985 7889999999999999988765443 46889999999999999999999999999999975
Q ss_pred CCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCc
Q 016974 141 PTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 141 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 220 (379)
. .....+.+|.+.|.+++|+|++...|++++.|++|++||++++.....+.. ..|...+.++++++.+++
T Consensus 159 ~-------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~ 228 (344)
T 4gqb_B 159 Q-------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC---SAPGYLPTSLAWHPQQSE 228 (344)
T ss_dssp T-------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTT
T ss_pred C-------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec---ceeeccceeeeecCCCCc
Confidence 3 255778899999999999998877899999999999999998876665532 345567899999998889
Q ss_pred EEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCC-CEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCC
Q 016974 221 MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDG-NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPH 299 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 299 (379)
+|++|+.|+.|++||++.. +.+..+.+|...|++++|+|++ ++|++|+.|++|+|||+++++.+. + . .|...
T Consensus 229 ~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~-~----~H~~~ 301 (344)
T 4gqb_B 229 VFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S-Q----AHRDF 301 (344)
T ss_dssp EEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E-C----CCSSC
T ss_pred ceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E-c----CCCCC
Confidence 9999999999999999865 5678899999999999999998 579999999999999999886543 2 1 23457
Q ss_pred eEEEEEccCCC-EEEEEEecCcEEEEeCCCce
Q 016974 300 VTSIAFSISGR-LLFAGYSNGDCYVWDTLLAK 330 (379)
Q Consensus 300 v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~~~ 330 (379)
|++++|+|+|+ +|++|+.||+|++|++.+..
T Consensus 302 V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 302 VRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999999987 57789999999999986543
No 28
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-41 Score=304.67 Aligned_cols=285 Identities=18% Similarity=0.363 Sum_probs=243.4
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCcee---eEee--cCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKT---HAIK--LPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~---~~~~--~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
...+|.+.|++++|+|++++|++++ ||.|++||+.+++.. ..+. .+...+.+++|+|+++++++++.|+.+++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3458999999999999999999999 999999999876543 3333 677889999999999999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 216 (379)
|+.... ......+.+|...|.++.|+|++ ..+++++.|+.|++||+.++.....+ ..|...+.++.+++
T Consensus 125 d~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~-----~~~~~~i~~~~~~~ 193 (337)
T 1gxr_A 125 DLAAPT-----PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQF-----QGHTDGASCIDISN 193 (337)
T ss_dssp ECCCC-------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECT
T ss_pred ECCCCC-----cceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeee-----ecccCceEEEEECC
Confidence 997532 22345677899999999999975 68999999999999999998776665 56888999999997
Q ss_pred CCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCC
Q 016974 217 SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENE 296 (379)
Q Consensus 217 ~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 296 (379)
+++++++++.|+.|++||++.. +.+..+ .|...+.+++|+|++++|++++.|+.|++||+++++.... ..+
T Consensus 194 -~~~~l~~~~~dg~i~~~d~~~~-~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~------~~~ 264 (337)
T 1gxr_A 194 -DGTKLWTGGLDNTVRSWDLREG-RQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL------HLH 264 (337)
T ss_dssp -TSSEEEEEETTSEEEEEETTTT-EEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE------CCC
T ss_pred -CCCEEEEEecCCcEEEEECCCC-ceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE------cCC
Confidence 6678999999999999999865 444444 4788999999999999999999999999999998765422 123
Q ss_pred CCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEec
Q 016974 297 IPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 297 ~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
...|.+++|+|+|++|++++.||.|++||..+++..... .|...|.+++|+|++++|++++.||.|++|++
T Consensus 265 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-----KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-----ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-----cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 456999999999999999999999999999888766443 47889999999999999999999999999986
No 29
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-42 Score=316.99 Aligned_cols=290 Identities=17% Similarity=0.261 Sum_probs=241.7
Q ss_pred ccccccEEEEEeeCCCC-eEEEEcCCCcEEEEEC----CCCc------eeeEeec----------CCcceEEEEECCCCC
Q 016974 64 QGHAGKVYSLDWTSERN-RIVSASQDGRLIVWNA----LTSQ------KTHAIKL----------PCAWVMTCAFSPTGQ 122 (379)
Q Consensus 64 ~gH~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~----~~~~------~~~~~~~----------~~~~v~~~~~s~~g~ 122 (379)
..|.++|++++|+|+++ +|++|+.||+|++||+ .+++ ....+.. |...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34668999999999999 9999999999999999 8887 4444444 566899999999999
Q ss_pred EEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCc--
Q 016974 123 SVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE-- 200 (379)
Q Consensus 123 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-- 200 (379)
+|++++.|+.+++|+... .....+.+|...|.++.|+|++ ..|++++.|+.|++||+.++.....+...
T Consensus 122 ~l~~~~~dg~i~i~~~~~--------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTG--------ALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp EEEEEETTSCEEEEETTS--------CEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EEEEEeCCCeEEEEeCCC--------CeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 999999999999999432 2445678899999999999975 57999999999999999877554432211
Q ss_pred -------------------------------------------------cccCCccCeEEEEEeCCCCcEEEEecCCCcE
Q 016974 201 -------------------------------------------------FQSGHTADVLSVSISGSNSRMFVSGSCDSTA 231 (379)
Q Consensus 201 -------------------------------------------------~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 231 (379)
....|...+.++++++ +++++++++.|+.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKLLLSASDDGTL 271 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTEEEEEETTSCE
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCEEEEEcCCCEE
Confidence 1135778899999997 66799999999999
Q ss_pred EEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCE
Q 016974 232 RLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRL 311 (379)
Q Consensus 232 ~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~ 311 (379)
++||++.. .....+.+|...|.+++|+|++ ++++++.|+.|++||+++++.+..+.. +...|.+++|+|+|++
T Consensus 272 ~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 272 RIWHGGNG-NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-----DGVPIFAGRISQDGQK 344 (425)
T ss_dssp EEECSSSB-SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-----TTCCEEEEEECTTSSE
T ss_pred EEEECCCC-ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-----CCccEEEEEEcCCCCE
Confidence 99999865 5667788899999999999999 999999999999999999887766543 2346999999999999
Q ss_pred EEEEEecCcEEEEeCCCce--------------------EEEecccccCCccC--ceeEEEECCCCCeEEEeeCCCcEEE
Q 016974 312 LFAGYSNGDCYVWDTLLAK--------------------VVLNLGSLQNSHEG--RITCLGLSADGSALCTGSWDTNLKI 369 (379)
Q Consensus 312 l~sg~~dg~i~iwd~~~~~--------------------~~~~~~~~~~~h~~--~v~~~~~s~d~~~l~s~s~D~~i~v 369 (379)
|++|+.||.|++||+...+ .+..+ ..|.. .|++++|+|++++|++++.||+|++
T Consensus 345 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 420 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASY----QSSQDNDYIFDLSWNCAGNKISVAYSLQEGSV 420 (425)
T ss_dssp EEEEETTSCEEEEECHHHHC--------------CEECCEEEEE----CCTTCCCCEEEEEECTTSSEEEEEESSSCCEE
T ss_pred EEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhh----cCcccCCceEEEEccCCCceEEEEecCceEEE
Confidence 9999999999999988776 55554 56765 9999999999999999999999999
Q ss_pred EecCc
Q 016974 370 WAFGG 374 (379)
Q Consensus 370 w~~~~ 374 (379)
|++.+
T Consensus 421 w~~~g 425 (425)
T 1r5m_A 421 VAIPG 425 (425)
T ss_dssp EECCC
T ss_pred EeecC
Confidence 99864
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=307.62 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=223.2
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
...++.||...|.+++|++++.+++||+.|++|++||+.+++.+..+..+...+.+++|+|++++|++++.|+.+++|++
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 44578999999999999999999999999999999999999999999988888999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
.... ....+..|...|.+++|+|++ .+|++|+.|++|++||+.++.....+ .+|...|.+++|+| +
T Consensus 152 ~~~~-------~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~sp-d 217 (321)
T 3ow8_A 152 ESGK-------KEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTL-----EGHAMPIRSLTFSP-D 217 (321)
T ss_dssp TTCS-------EEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCCCEEEECT-T
T ss_pred CCCc-------eeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEE-----cccCCceeEEEEcC-C
Confidence 7532 334566788899999999975 68999999999999999998877666 57889999999997 6
Q ss_pred CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCC
Q 016974 219 SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIP 298 (379)
Q Consensus 219 ~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 298 (379)
+++|++|+.|+.|++||++.. .....+.+|...|.+++|+|++.+|++++.|++|++||+++++.+..+.. +..
T Consensus 218 ~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-----h~~ 291 (321)
T 3ow8_A 218 SQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-----HQD 291 (321)
T ss_dssp SCEEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSS
T ss_pred CCEEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-----CCC
Confidence 789999999999999999865 56778899999999999999999999999999999999999988776643 345
Q ss_pred CeEEEEEccCCCEEEEEEecCcEEEEeC
Q 016974 299 HVTSIAFSISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 299 ~v~~~~fs~~g~~l~sg~~dg~i~iwd~ 326 (379)
.|.+++|+|+|++|++++.||.|++||.
T Consensus 292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 292 QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 6999999999999999999999999995
No 31
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-43 Score=329.44 Aligned_cols=306 Identities=14% Similarity=0.149 Sum_probs=251.5
Q ss_pred ccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCC----CceeeEeecCCcceEEEEECCC-CCEEEEeeCCCcEEEEEc
Q 016974 64 QGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALT----SQKTHAIKLPCAWVMTCAFSPT-GQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 64 ~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~ 138 (379)
.+|...|++++|+|++++|++|+.||+|++||+.+ .+....+..|...|.+++|+|+ +++|++++.|+.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 35889999999999999999999999999999987 3577788889999999999998 899999999999999999
Q ss_pred CCCCCCCC--CcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCcc-ccCCccCeEEEEEe
Q 016974 139 NSPTDKDG--NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF-QSGHTADVLSVSIS 215 (379)
Q Consensus 139 ~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~ 215 (379)
........ .........+|...|.+++|+|++...|++++.|+.|++||+.++.....+.... ..+|...+.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 86431100 0011123467999999999999866789999999999999999987766653210 12337889999999
Q ss_pred CCCCcEEEEecCCC---cEEEEEccCCccceEEEe-cccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECCCCceeEEEee
Q 016974 216 GSNSRMFVSGSCDS---TARLWDTRVASRAVRTFH-GHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQ 290 (379)
Q Consensus 216 ~~~~~~l~sg~~d~---~i~vwd~~~~~~~~~~~~-~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 290 (379)
|.+..++++++.|+ .|++||++........+. +|...|.+++|+| ++.+|++++.|++|++||+++++.+..+..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 87668999999999 999999987656667777 8999999999999 999999999999999999999988776643
Q ss_pred ccCCCCCCCeEEEEEccCC-CEEEEEEecCcEEEEeCCCceEEEecc-------------------------------cc
Q 016974 291 QHGENEIPHVTSIAFSISG-RLLFAGYSNGDCYVWDTLLAKVVLNLG-------------------------------SL 338 (379)
Q Consensus 291 ~~~~~~~~~v~~~~fs~~g-~~l~sg~~dg~i~iwd~~~~~~~~~~~-------------------------------~~ 338 (379)
+...|.+++|+|++ ++|++++.||.|++||+...+...... ..
T Consensus 304 -----~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (416)
T 2pm9_A 304 -----RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQA 378 (416)
T ss_dssp -----SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCC
T ss_pred -----CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccC
Confidence 23468999999999 899999999999999986654221110 01
Q ss_pred cCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 339 QNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 339 ~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
...|..++.+++|+|||++|++++.|++|+||++..
T Consensus 379 ~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 379 PTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred CccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 112677888999999999999999999999999763
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=311.46 Aligned_cols=303 Identities=18% Similarity=0.276 Sum_probs=236.1
Q ss_pred eccccccccEEEEEeeCCCCeE-EEEcC---CCcEEEEECCCCceeeEee-cCCcceEEEEECCC---CCEEEEeeCCCc
Q 016974 61 RTLQGHAGKVYSLDWTSERNRI-VSASQ---DGRLIVWNALTSQKTHAIK-LPCAWVMTCAFSPT---GQSVACGGLDSV 132 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l-~s~s~---D~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~---g~~l~~~~~d~~ 132 (379)
..+.+|.+.|++++|+|+++.+ ++|+. |++|++||+.+++...... .|...|.+++|+|+ |.+|++++.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 4678899999999999998654 56666 9999999999887654433 57788999999999 799999999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEe------cCCCceEEEeeCCCeEEEeecCCCe-eEEEecCccccCC
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYV------PDEDTHLITSSGDQTCVLWDITTGL-RTSVFGGEFQSGH 205 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~------~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~h 205 (379)
+++||+.... .....+.+|...|.++.|. |+ +..|++++.|++|++||+.++. ....+... ...+
T Consensus 92 i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~ 163 (357)
T 3i2n_A 92 LHIWNLEAPE------MPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSRDGTVKVWDPRQKDDPVANMEPV-QGEN 163 (357)
T ss_dssp EEEECTTSCS------SCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEETTSCEEEECTTSCSSCSEEECCC-TTSC
T ss_pred EEEEeCCCCC------ccEEEEEecccceEEEeeccccccCCC-ccEEEEEeCCCeEEEEeCCCCCCcceecccc-CCCC
Confidence 9999997532 1335677999999999764 44 4689999999999999998865 33333211 1112
Q ss_pred ccCeEEEEEeC---CCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEcc---CCCEEEEeeCCCeEEEEEC
Q 016974 206 TADVLSVSISG---SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP---DGNRFGTGSDDGTCRLFDI 279 (379)
Q Consensus 206 ~~~v~~~~~~~---~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp---~g~~l~s~s~D~~i~iwd~ 279 (379)
...+.++.+.+ ++++++++++.|+.|++||++... . .....|...|.+++|+| ++.+|++++.|+.|++||+
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-L-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-E-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-e-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 34788888422 477899999999999999998653 2 34467889999999999 9999999999999999999
Q ss_pred CCCceeEEEeeccCCCCCCCeEEEEEccCCC-EEEEEEecCcEEEEeCCCce-------------------EEEeccccc
Q 016974 280 RTGHQLQVYYQQHGENEIPHVTSIAFSISGR-LLFAGYSNGDCYVWDTLLAK-------------------VVLNLGSLQ 339 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~~~-------------------~~~~~~~~~ 339 (379)
++++.+..+.......+...|.+++|+|+++ +|++|+.||.|++||+..+. .+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---- 317 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV---- 317 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE----
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc----
Confidence 8765443332111112345799999999999 89999999999999976432 22233
Q ss_pred CCccCceeEEEECCCCCeEE-EeeCCCcEEEEecCceee
Q 016974 340 NSHEGRITCLGLSADGSALC-TGSWDTNLKIWAFGGYRR 377 (379)
Q Consensus 340 ~~h~~~v~~~~~s~d~~~l~-s~s~D~~i~vw~~~~~~~ 377 (379)
..|..+|++++|+|++++|+ +++.|++|+||++..+.+
T Consensus 318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 57899999999999999998 899999999999987654
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.2e-43 Score=326.24 Aligned_cols=297 Identities=15% Similarity=0.202 Sum_probs=230.1
Q ss_pred ccccccccEEEEEeeC-CCCeEEEEcCCCcEEEEECCCCceee--EeecCCcceEEEEECC-CCCEEEEeeCCCcEEEEE
Q 016974 62 TLQGHAGKVYSLDWTS-ERNRIVSASQDGRLIVWNALTSQKTH--AIKLPCAWVMTCAFSP-TGQSVACGGLDSVCSIFN 137 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~ 137 (379)
...+|...|+||+|+| ++++||+|+.||+|+|||+.+++... .+..|...|.+++|+| ++.+|++++.|++|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 4567889999999999 56789999999999999998776544 3457889999999998 689999999999999999
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
+.... .........+...+.++.|+|++ .+|++|+.||+|++||+.... ...+ .+|...|.+++|+|.
T Consensus 194 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~-~~~~-----~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 194 FKGNI-----LRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKE-LWNL-----RMHKKKVTHVALNPC 261 (435)
T ss_dssp TTSCE-----EEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCB-CCCS-----BCCSSCEEEEEECTT
T ss_pred ccCCc-----eeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcce-eEEE-----ecccceEEeeeecCC
Confidence 86421 11111112334467789999975 689999999999999987542 2222 579999999999987
Q ss_pred CCcEEEEecCCCcEEEEEccCCcc--ceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCC-
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASR--AVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE- 294 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~- 294 (379)
+..++++|+.|+.|++||++.... ......+|...|++++|+|+|.+|++++.|++|+|||++++.....+......
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~ 341 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRH 341 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCC
T ss_pred CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccc
Confidence 777999999999999999986432 22234579999999999999999999999999999999988766554321111
Q ss_pred CCCCCeEEEEEccCCCEEEEEE------------ecCcEEEEeCCCceEEEecccccCCccCceeEE-EECCCCCeEEEe
Q 016974 295 NEIPHVTSIAFSISGRLLFAGY------------SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCL-GLSADGSALCTG 361 (379)
Q Consensus 295 ~~~~~v~~~~fs~~g~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~-~~s~d~~~l~s~ 361 (379)
.....+..+.|+|++.+++++. .++.|++||..+++.+..+. .+|...|.++ +|+|+|++||+|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~---~~~~~~v~s~~~fspdg~~lasg 418 (435)
T 4e54_B 342 FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY---DPESSGISSLNEFNPMGDTLASA 418 (435)
T ss_dssp CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC---CSSCCCCCCEEEECTTSSCEEEE
T ss_pred cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe---CCCCCcEEEEEEECCCCCEEEEE
Confidence 1111233456777777766664 23579999999888776652 5688889887 699999999987
Q ss_pred eCCCcEEEEecCc
Q 016974 362 SWDTNLKIWAFGG 374 (379)
Q Consensus 362 s~D~~i~vw~~~~ 374 (379)
+ |++|+||++..
T Consensus 419 ~-d~~i~iW~~~~ 430 (435)
T 4e54_B 419 M-GYHILIWSQQE 430 (435)
T ss_dssp C-SSEEEECCCC-
T ss_pred c-CCcEEEEECCc
Confidence 6 88999999876
No 34
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-42 Score=316.30 Aligned_cols=292 Identities=19% Similarity=0.297 Sum_probs=237.5
Q ss_pred eccccccccEEEEEeeCC----CCeEEEEcCCCcEEEEECCCCceeeEeec-----CCcceEEEEECCC----CCEEEEe
Q 016974 61 RTLQGHAGKVYSLDWTSE----RNRIVSASQDGRLIVWNALTSQKTHAIKL-----PCAWVMTCAFSPT----GQSVACG 127 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~----~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~----g~~l~~~ 127 (379)
....+|.++|++++|+|+ ...+++++.++.|++||..+++.+..+.. +...+.+++|+|+ |++|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345699999999999984 45677777777999999998877666653 4577999999999 6799999
Q ss_pred eCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCcc
Q 016974 128 GLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA 207 (379)
Q Consensus 128 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~ 207 (379)
+.|+.|++||+.+.. ....+.+|...|.++.|+|+++.+|++++.|++|++||+.++.....+.. ..+|..
T Consensus 92 ~~dg~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~ 162 (366)
T 3k26_A 92 GSRGIIRIINPITMQ-------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG--VEGHRD 162 (366)
T ss_dssp ETTCEEEEECTTTCC-------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS--TTSCSS
T ss_pred cCCCEEEEEEchhce-------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc--cccccC
Confidence 999999999987532 45567789999999999995567899999999999999998877665521 146889
Q ss_pred CeEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc---------------------------ceEEEecccCCeeEEEEcc
Q 016974 208 DVLSVSISGSNSRMFVSGSCDSTARLWDTRVASR---------------------------AVRTFHGHEGDVNTVKFFP 260 (379)
Q Consensus 208 ~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~---------------------------~~~~~~~h~~~v~~v~~sp 260 (379)
.|.++.|++ +++++++++.|+.|++||++.... ......+|...|.+++|+
T Consensus 163 ~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 163 EVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred ceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 999999997 677999999999999999875321 112233499999999998
Q ss_pred CCCEEEEeeCCCeEEEEECCCCce--------------eEEEeeccCCCCCCCeEEEEEccC--CCEEEEEEecCcEEEE
Q 016974 261 DGNRFGTGSDDGTCRLFDIRTGHQ--------------LQVYYQQHGENEIPHVTSIAFSIS--GRLLFAGYSNGDCYVW 324 (379)
Q Consensus 261 ~g~~l~s~s~D~~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~v~~~~fs~~--g~~l~sg~~dg~i~iw 324 (379)
+++|++++.|+.|++||++++.. +..+. .+...|.+++|+|+ |++|++|+.||.|++|
T Consensus 241 -~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 241 -GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-----YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp -TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-----CSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred -CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-----ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 77999999999999999987653 22221 12345889999999 9999999999999999
Q ss_pred eCCCce----EEEecccccCCc--cCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 325 DTLLAK----VVLNLGSLQNSH--EGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 325 d~~~~~----~~~~~~~~~~~h--~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
|+..++ ....+ ..| ..+|++++|+|++++|++++.||+|++|++.
T Consensus 315 d~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 315 DLEVEDPHKAKCTTL----THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECCSSSGGGCEEEEE----CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ECCCCCCccccceEE----cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 987754 22233 344 7899999999999999999999999999975
No 35
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.8e-42 Score=317.86 Aligned_cols=249 Identities=22% Similarity=0.357 Sum_probs=223.1
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
...++.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+..|...|.+++|+|+++++++++.|++|++||+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
.... ....+.+|...|.++.++|++ .+|++|+.|++|++||+.++.....+ .+|...|.++.|+|..
T Consensus 222 ~~~~-------~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 222 QTGY-------CVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAEL-----REHRHVVECISWAPES 288 (410)
T ss_dssp TTCC-------EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECCSC
T ss_pred CCCc-------EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEe-----cCCCceEEEEEEcCcc
Confidence 7532 456788999999999999975 68999999999999999988776665 5788899999998742
Q ss_pred -------------------CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEEC
Q 016974 219 -------------------SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDI 279 (379)
Q Consensus 219 -------------------~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~ 279 (379)
+.++++|+.|+.|++||++.. ..+..+.+|...|.+++|+|+|++|++|+.|++|++||+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp GGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred cccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 568999999999999999865 567888999999999999999999999999999999999
Q ss_pred CCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeC
Q 016974 280 RTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~ 326 (379)
++++.+..+.. +...|++++|+|++++|++|+.||+|++|+.
T Consensus 368 ~~~~~~~~~~~-----h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 368 KNKRCMKTLNA-----HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TTSCCCEEEEC-----CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCCceEEEEcC-----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 98887766643 2346999999999999999999999999985
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-41 Score=301.25 Aligned_cols=255 Identities=17% Similarity=0.243 Sum_probs=210.6
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCC--CceeeEeecCCcceEEEEECCC--CCEEEEeeCCCcEEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALT--SQKTHAIKLPCAWVMTCAFSPT--GQSVACGGLDSVCSIF 136 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~d~~i~iw 136 (379)
..+.+|.+.|++++|+|+|++||||+.|++|+|||+.. .+...++..|...|.+++|+|+ |++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 46889999999999999999999999999999999874 3567888999999999999874 8999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCee--EEEecCccccCCccCeEEEE
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLR--TSVFGGEFQSGHTADVLSVS 213 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~ 213 (379)
|+.... ......+.+|...|.+++|+|+. +.+|++++.|++|++||++++.. ...+ .+|...|.+++
T Consensus 83 d~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-----~~h~~~v~~~~ 152 (297)
T 2pm7_B 83 KEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-----DAHAIGVNSAS 152 (297)
T ss_dssp EBSSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-----ECCSSCEEEEE
T ss_pred EcCCCc-----eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-----ecccCccceEe
Confidence 997532 22334567899999999999963 46899999999999999986531 1122 57889999999
Q ss_pred EeCCC------------CcEEEEecCCCcEEEEEccCCcc---ceEEEecccCCeeEEEEccCC---CEEEEeeCCCeEE
Q 016974 214 ISGSN------------SRMFVSGSCDSTARLWDTRVASR---AVRTFHGHEGDVNTVKFFPDG---NRFGTGSDDGTCR 275 (379)
Q Consensus 214 ~~~~~------------~~~l~sg~~d~~i~vwd~~~~~~---~~~~~~~h~~~v~~v~~sp~g---~~l~s~s~D~~i~ 275 (379)
|+|.. +++|++|+.|+.|++||++.... ....+.+|...|.+++|+|++ .+|++++.|++|+
T Consensus 153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 99742 46899999999999999975432 456788999999999999984 8999999999999
Q ss_pred EEECCCCce--eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 276 LFDIRTGHQ--LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 276 iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
|||+++... ...... ...+...|.+++|+|+|++|++|+.||.|++|+..
T Consensus 233 iWd~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLK--EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEESSTTSCCEEEESS--SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEeCCCCCccceeeee--cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 999876431 111111 12234579999999999999999999999999864
No 37
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-42 Score=330.24 Aligned_cols=297 Identities=12% Similarity=0.106 Sum_probs=225.8
Q ss_pred ccccEEEEEeeCCC---------CeEEE-------------------EcCCCcEEEEECCCCcee----eEeecCCcceE
Q 016974 66 HAGKVYSLDWTSER---------NRIVS-------------------ASQDGRLIVWNALTSQKT----HAIKLPCAWVM 113 (379)
Q Consensus 66 H~~~v~~~~~~~~~---------~~l~s-------------------~s~D~~v~iwd~~~~~~~----~~~~~~~~~v~ 113 (379)
+.+.|++|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+..+.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56789999999976 45555 668899999999877642 34566778899
Q ss_pred EEEECCC------CCEEEEeeCCCcEEEEEcCCCCCCCC----CcceeeeecccccceEEEEEecCCCceEEEeeCCCeE
Q 016974 114 TCAFSPT------GQSVACGGLDSVCSIFNLNSPTDKDG----NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTC 183 (379)
Q Consensus 114 ~~~~s~~------g~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 183 (379)
.++|+|+ +.+||+++.|++|+|||+........ .......+.+|...|.+++|+|+ ..|++|+.||+|
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV 289 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFV 289 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEE
Confidence 9999997 57999999999999999975432110 00122467889999999999974 479999999999
Q ss_pred EEeecCCCee-EEEecCccccCCccCeEEEE-EeCCCC-cEEEEecCCCcEEEEEccCCccceEEEecccC--CeeEEEE
Q 016974 184 VLWDITTGLR-TSVFGGEFQSGHTADVLSVS-ISGSNS-RMFVSGSCDSTARLWDTRVASRAVRTFHGHEG--DVNTVKF 258 (379)
Q Consensus 184 ~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~-~~~~~~-~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~--~v~~v~~ 258 (379)
++||++++.. ...+ .+|...|.+++ ..++++ .+|+||+.|++|++||++.. +....+.+|.. .|.+++|
T Consensus 290 ~lWD~~~~~~~~~~~-----~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~-~~~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 290 AEFDLTDPEVPSFYD-----QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI-ATTKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp EEEETTBCSSCSEEE-----ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH-HHHCEEEEECSCCSCCCEEE
T ss_pred EEEECCCCCCceEEe-----ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC-CcccccccccccCcccceEe
Confidence 9999987532 2222 57999999994 334455 79999999999999999865 34445667753 5899999
Q ss_pred ccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCc-----e---
Q 016974 259 FPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLA-----K--- 330 (379)
Q Consensus 259 sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~-----~--- 330 (379)
+|+++.+++++.|++|++||++++..+..+.. +...|++++|||+|++|++|+.||+|++||.... +
T Consensus 364 sp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-----H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~ 438 (524)
T 2j04_B 364 CPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-----RETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSS 438 (524)
T ss_dssp ETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-----CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC----
T ss_pred CCCcCeEEEeCCCCcEEEEECcccccceeeec-----CCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCc
Confidence 99999999999999999999999887665543 3457999999999999999999999999985221 0
Q ss_pred ------EEEec--------------------------ccccCCccCceeEEEECCCC---CeEEEeeCCCcEEEEecCce
Q 016974 331 ------VVLNL--------------------------GSLQNSHEGRITCLGLSADG---SALCTGSWDTNLKIWAFGGY 375 (379)
Q Consensus 331 ------~~~~~--------------------------~~~~~~h~~~v~~~~~s~d~---~~l~s~s~D~~i~vw~~~~~ 375 (379)
.+..+ .....+|..+|.+|+|+|++ ..||+|+.||+||||++..-
T Consensus 439 ~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 439 ATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp --CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred cceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 01000 01123588999999999996 49999999999999999874
No 38
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=311.17 Aligned_cols=299 Identities=20% Similarity=0.299 Sum_probs=241.9
Q ss_pred eccccccccEEEEEeeC-CCCeEEEEcCCCcEEEEECCCCceeeEee-------------cCCcceEEEEECC-CCCEEE
Q 016974 61 RTLQGHAGKVYSLDWTS-ERNRIVSASQDGRLIVWNALTSQKTHAIK-------------LPCAWVMTCAFSP-TGQSVA 125 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------------~~~~~v~~~~~s~-~g~~l~ 125 (379)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.+++....+. .|...|.+++|+| ++.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999999 99999999999999999998877655443 4788999999999 778999
Q ss_pred EeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC--CceEEEeeCCCeEEEeecCCCeeEEEecCcccc
Q 016974 126 CGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE--DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQS 203 (379)
Q Consensus 126 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 203 (379)
+++.|+.+++||+.... ....+ .+...+.++.+.|.. ...+++++.|+.|++||+.++.....+ .
T Consensus 117 s~~~d~~i~iwd~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-----~ 183 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQ-------TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL-----Q 183 (408)
T ss_dssp EEETTSEEEEEETTTTE-------EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE-----C
T ss_pred EEeCCCeEEEeeCCCCc-------cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee-----c
Confidence 99999999999987532 22222 366788999998864 247999999999999999988766555 5
Q ss_pred CCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEE---------------ecccCCeeEEEEccCCCEEEEe
Q 016974 204 GHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF---------------HGHEGDVNTVKFFPDGNRFGTG 268 (379)
Q Consensus 204 ~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~---------------~~h~~~v~~v~~sp~g~~l~s~ 268 (379)
+|...|.+++++|.+..++++|+.||.|++||++........+ .+|...|.+++|+|++++|+++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 7889999999998666679999999999999998765445444 5788999999999999999999
Q ss_pred eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeE
Q 016974 269 SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITC 348 (379)
Q Consensus 269 s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 348 (379)
+.|+.|++||+++++................+........+..+++++.++.|++||..+++.+..+ .+|.+.|++
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~----~~~~~~v~~ 339 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML----KGHYKTVDC 339 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE----CCCSSCEEE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee----ccCCCeEEE
Confidence 9999999999998876443322111111112222233344556777788999999999998888776 679999999
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecCcee
Q 016974 349 LGLSADGSALCTGSWDTNLKIWAFGGYR 376 (379)
Q Consensus 349 ~~~s~d~~~l~s~s~D~~i~vw~~~~~~ 376 (379)
++|+|++++|++++.||.|++|++....
T Consensus 340 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 340 CVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred EEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 9999999999999999999999998743
No 39
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.7e-42 Score=315.50 Aligned_cols=289 Identities=13% Similarity=0.102 Sum_probs=216.2
Q ss_pred ccEEEEEeeCCCCeEEEEcCCC-------cEEEEECCCCcee----------eEeecCCcceEEEEECCCCCEEEEe---
Q 016974 68 GKVYSLDWTSERNRIVSASQDG-------RLIVWNALTSQKT----------HAIKLPCAWVMTCAFSPTGQSVACG--- 127 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~-------~v~iwd~~~~~~~----------~~~~~~~~~v~~~~~s~~g~~l~~~--- 127 (379)
-||++++|+||+++|++|+.|. +|++|++..+... ..+..+...+.+++++ +..++++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 3799999999999999997644 5999998755321 1234455667776554 4555554
Q ss_pred --------eCCCcEEEEEcCCCCCCCCCcceee-----eecccccceEEEEEecCCCce-EEEeeCCCeEEEeecCCCee
Q 016974 128 --------GLDSVCSIFNLNSPTDKDGNLPVSR-----MLSGHKGYVSCCQYVPDEDTH-LITSSGDQTCVLWDITTGLR 193 (379)
Q Consensus 128 --------~~d~~i~iw~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~-l~s~~~d~~i~~wd~~~~~~ 193 (379)
+.|+.+++|++...... ..... ....+...+.+++|+|++... +++++.|++|++||+.++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQ---LEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTE---EEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred CccEEEEecCCCcEEEEEecCCCce---EEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 56888999998753311 11111 122345678999999987432 24566899999999999877
Q ss_pred EEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccce-EEEecccCCeeEEEEccCCCEEEEeeCCC
Q 016974 194 TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAV-RTFHGHEGDVNTVKFFPDGNRFGTGSDDG 272 (379)
Q Consensus 194 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~l~s~s~D~ 272 (379)
...+ .|...|.+++|+| +++++++++.++ +++|+........ ....+|...|.+++|+|++.++++++.|+
T Consensus 170 ~~~~------~~~~~V~~v~fsp-dg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 170 KFEI------ETRGEVKDLHFST-DGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp EEEE------ECSSCCCEEEECT-TSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred EEEe------CCCCceEEEEEcc-CCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 6654 3667899999997 778899988655 5666655443322 23457888999999999999999999887
Q ss_pred ----eEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeE
Q 016974 273 ----TCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITC 348 (379)
Q Consensus 273 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 348 (379)
.+++||+........... ....+...|++++|||+|++||+|+.|++|+|||+.+++.+..+. .+|..+|++
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~---~gH~~~V~~ 317 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK---QAHSFAITE 317 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET---TSSSSCEEE
T ss_pred cceeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec---CcccCCEEE
Confidence 689999877653221111 112234579999999999999999999999999999988776532 689999999
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecC
Q 016974 349 LGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 349 ~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
++|+|||++|||||.|++||||++-
T Consensus 318 v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999999999999984
No 40
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-42 Score=322.17 Aligned_cols=304 Identities=14% Similarity=0.208 Sum_probs=235.4
Q ss_pred eEeecc-ccccccEEEEEeeC-CCCeEEEEcCCCcEEEEECCC---Cc---eeeEeecCCcceEEEEECCCCCEEEEeeC
Q 016974 58 VCCRTL-QGHAGKVYSLDWTS-ERNRIVSASQDGRLIVWNALT---SQ---KTHAIKLPCAWVMTCAFSPTGQSVACGGL 129 (379)
Q Consensus 58 ~~~~~l-~gH~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~---~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 129 (379)
....++ .+|.+.|++++|+| ++++|+||+.||+|+|||+.+ +. ....+ .|...|.+++|+|++++|++++.
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEET
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeC
Confidence 455667 89999999999999 999999999999999999866 33 22232 47889999999999999999999
Q ss_pred CCcEEEEEcCCCCCCCCCc------ceeeeec--c--cccceEEEEEe--cCCCceEEEeeCCCeEEEeecCCCeeEEEe
Q 016974 130 DSVCSIFNLNSPTDKDGNL------PVSRMLS--G--HKGYVSCCQYV--PDEDTHLITSSGDQTCVLWDITTGLRTSVF 197 (379)
Q Consensus 130 d~~i~iw~~~~~~~~~~~~------~~~~~~~--~--h~~~v~~~~~~--~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 197 (379)
|+.|++||+.... .++. ...+.+. . +...+.++.+. ++ +..|++++.|++|++||++++.....+
T Consensus 132 dg~i~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 132 DGQIIVLKVNHYQ--QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp TSEEEEEEEEEEE--ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEecccc--CCceeeccccceeEEEEccCcccccCceEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 9999999985210 0110 0111111 1 45566666643 44 468999999999999999998777666
Q ss_pred cCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEe-cccCCeeEEEEc----cCCCEEEEeeCCC
Q 016974 198 GGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH-GHEGDVNTVKFF----PDGNRFGTGSDDG 272 (379)
Q Consensus 198 ~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~-~h~~~v~~v~~s----p~g~~l~s~s~D~ 272 (379)
.. ..|...|.+++++| +++++++|+.||.|++||++.. ..+..+. +|...|.+++|+ |++.+|++|+.|+
T Consensus 209 ~~---~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 209 EN---SPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp EC---CGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred cc---CCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 32 12788999999997 5789999999999999999864 5666665 788899999665 4678999999999
Q ss_pred eEEEEECCCCceeEEEeeccC---------------------CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE
Q 016974 273 TCRLFDIRTGHQLQVYYQQHG---------------------ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV 331 (379)
Q Consensus 273 ~i~iwd~~~~~~~~~~~~~~~---------------------~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~ 331 (379)
+|++||+++++.+..+..... ..+...|++++|+ ++++|++|+.||.|++||+.+++.
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence 999999999887776653210 1134568999999 889999999999999999877654
Q ss_pred EEeccc---------------------------------ccCCccCceeEEEECCC--CCeEEEeeCCCcEEEEe
Q 016974 332 VLNLGS---------------------------------LQNSHEGRITCLGLSAD--GSALCTGSWDTNLKIWA 371 (379)
Q Consensus 332 ~~~~~~---------------------------------~~~~h~~~v~~~~~s~d--~~~l~s~s~D~~i~vw~ 371 (379)
...+.. ....|...|++++|+++ +.+|++|+.||+|+||+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 363 SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 333321 01238999999999988 78999999999999995
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-43 Score=321.64 Aligned_cols=293 Identities=15% Similarity=0.214 Sum_probs=226.2
Q ss_pred cccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCC--ceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC
Q 016974 63 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTS--QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~ 140 (379)
+..|.++|++++|+|++++|++|+.|++|++||+.++ +....+..|...|.+++|+|++++|++++.|+.+++||+..
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4457789999999999999999999999999999988 67788889999999999999999999999999999999975
Q ss_pred CCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCee---EEEecCccccCCccCeEEEEEeCC
Q 016974 141 PTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLR---TSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 141 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
.. .......+.+|...|.+++|+|++ ..|++++.|++|++||+.++.. ...+ ...|...|.+++++|
T Consensus 87 ~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~h~~~v~~~~~~~- 156 (377)
T 3dwl_C 87 DG----TWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHL----KRPLRSTILSLDWHP- 156 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEE----CSSCCSCEEEEEECT-
T ss_pred CC----ceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEe----ecccCCCeEEEEEcC-
Confidence 32 122345567899999999999975 6799999999999999987652 3333 123899999999997
Q ss_pred CCcEEEEecCCCcEEEEEccCC-----------------ccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVA-----------------SRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIR 280 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~-----------------~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~ 280 (379)
+++++++|+.|+.|++||+... ...+..+ +|...|.+++|+|+|++|++++.|++|++||++
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 6789999999999999998521 2344455 899999999999999999999999999999999
Q ss_pred CCce----eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE-------------------------
Q 016974 281 TGHQ----LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV------------------------- 331 (379)
Q Consensus 281 ~~~~----~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~------------------------- 331 (379)
+++. +..+. .+...|.+++|+|+|++|++|+.++.+ +|+......
T Consensus 236 ~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (377)
T 3dwl_C 236 APEQPPRALITVK-----LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGR 309 (377)
T ss_dssp STTSCEEECCCEE-----CSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCC
T ss_pred CCCCcceeeEeec-----CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccc
Confidence 8876 33332 234569999999999999998766655 666431110
Q ss_pred --------------EE---------ecccccCCccCceeEEEECCCC-C---eEEEeeCCCcEEEEec
Q 016974 332 --------------VL---------NLGSLQNSHEGRITCLGLSADG-S---ALCTGSWDTNLKIWAF 372 (379)
Q Consensus 332 --------------~~---------~~~~~~~~h~~~v~~~~~s~d~-~---~l~s~s~D~~i~vw~~ 372 (379)
.. ........|.+.|+++++.++. . .|+|||.||+|+||++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 310 EEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00 0001123499999999976544 3 5999999999999985
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-42 Score=319.02 Aligned_cols=294 Identities=14% Similarity=0.292 Sum_probs=243.8
Q ss_pred ccccEEEEEeeCCCC-eEEEE----------cCCCcEEEEECCCCce---eeEeecCCcceEEEEECCCCCEEEEeeCCC
Q 016974 66 HAGKVYSLDWTSERN-RIVSA----------SQDGRLIVWNALTSQK---THAIKLPCAWVMTCAFSPTGQSVACGGLDS 131 (379)
Q Consensus 66 H~~~v~~~~~~~~~~-~l~s~----------s~D~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 131 (379)
+...|.+++|+|+++ +|++| +.|++|++||+.++.. ...+ .+...|.+++|+|++++|++++.|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 344688999999987 89999 8999999999987753 2233 4677899999999999999999999
Q ss_pred cEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCe------eEEEecCccccCC
Q 016974 132 VCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGL------RTSVFGGEFQSGH 205 (379)
Q Consensus 132 ~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~------~~~~~~~~~~~~h 205 (379)
.+++|++...... ......+.+|...|.+++|+|+++.+|++++.|++|++||+.++. ..... .....|
T Consensus 90 ~v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~ 164 (416)
T 2pm9_A 90 SLELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP--GQSMSS 164 (416)
T ss_dssp CEEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC--CCSCCS
T ss_pred eEEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc--ccccCC
Confidence 9999999752211 124566789999999999999866789999999999999998765 22111 112468
Q ss_pred ccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecc------cCCeeEEEEccCC-CEEEEeeCCC---eEE
Q 016974 206 TADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGH------EGDVNTVKFFPDG-NRFGTGSDDG---TCR 275 (379)
Q Consensus 206 ~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h------~~~v~~v~~sp~g-~~l~s~s~D~---~i~ 275 (379)
...+.+++|++.++.++++++.|+.|++||++.. +.+..+..| ...|.+++|+|++ .++++++.|+ .|+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 8899999999866789999999999999999865 556666665 7889999999997 6899999999 999
Q ss_pred EEECCCCc-eeEEEeeccCCCCCCCeEEEEEcc-CCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECC
Q 016974 276 LFDIRTGH-QLQVYYQQHGENEIPHVTSIAFSI-SGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSA 353 (379)
Q Consensus 276 iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~fs~-~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 353 (379)
+||++++. .+..+. ..+...|.+++|+| ++++|++|+.||.|++||+.+++.+..+ ..|...|++++|+|
T Consensus 244 ~~d~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~----~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 244 IWDLRNANTPLQTLN----QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF----PARGNWCFKTKFAP 315 (416)
T ss_dssp EEETTSTTSCSBCCC----SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE----ECSSSCCCCEEECT
T ss_pred EEeCCCCCCCcEEee----cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee----cCCCCceEEEEECC
Confidence 99999863 333221 02345799999999 9999999999999999999988877766 57889999999999
Q ss_pred CC-CeEEEeeCCCcEEEEecCc
Q 016974 354 DG-SALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 354 d~-~~l~s~s~D~~i~vw~~~~ 374 (379)
++ .+|++++.|++|++|++..
T Consensus 316 ~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 316 EAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp TCTTEEEECCSSSEEEEEESCC
T ss_pred CCCCEEEEEecCCcEEEEEccC
Confidence 99 8999999999999999876
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.1e-41 Score=306.83 Aligned_cols=250 Identities=18% Similarity=0.219 Sum_probs=205.5
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceee----EeecCCcceEEEEECCCCCEEEEeeCCCcEEEEE
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTH----AIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFN 137 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~ 137 (379)
...+|...|++++|+|++. +++++.||+|+|||+.+++... ....|...|.+++|+|+|++|++++.|+.|++||
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3457899999999999875 5678899999999998876543 2346788999999999999999999999999999
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
+... .....+.+|...|.+++|+|+++..+++++.|++|++||++++.....+.. ..|...+.+++|+|.
T Consensus 168 ~~~~-------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 168 LSQK-------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF---CASDTIPTSVTWHPE 237 (357)
T ss_dssp TTTT-------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC---TTCCSCEEEEEECTT
T ss_pred CCCC-------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee---ccccccccchhhhhc
Confidence 8753 245677899999999999998877899999999999999988765443321 356678999999998
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCC-CEEEEeeCCCeEEEEECCCCceeEEEeeccCCCC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDG-NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENE 296 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 296 (379)
++.+|++|+.|+.|++||++.. +.+..+.+|...|++++|+|++ ++|++|+.|++|+|||+++++.+..+ .+
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~------~H 310 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL------SH 310 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC------CC
T ss_pred ccceEEEeecccceeEEECCCC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC------CC
Confidence 8889999999999999999865 5678899999999999999987 57999999999999999988765432 13
Q ss_pred CCCeEEEEEcc-CCCEEEEEEecCcEEEEeCCCc
Q 016974 297 IPHVTSIAFSI-SGRLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 297 ~~~v~~~~fs~-~g~~l~sg~~dg~i~iwd~~~~ 329 (379)
...|++++|+| ++++|++|+.||+|++||+...
T Consensus 311 ~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 45799999998 7999999999999999998654
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.7e-40 Score=305.43 Aligned_cols=277 Identities=22% Similarity=0.397 Sum_probs=232.9
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEee--cCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIK--LPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
++.|+|+++ +.||+| .|++|+|||..+++..+.+. .|...|.+++|+|+|++|++|+.|+.|+|||+...
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~------ 179 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ------ 179 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT------
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC------
Confidence 567999975 577665 59999999999999887765 45678999999999999999999999999998753
Q ss_pred cceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCee-EEEecCccccCCccCeEEEEEeCCCCcEEEEec
Q 016974 148 LPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLR-TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS 226 (379)
Q Consensus 148 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 226 (379)
...+.+.+|...+.++.+.+ ..|++|+.|+.+++||...... ...+ .+|...+..+.+.+ ++.++++++
T Consensus 180 -~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~-----~~h~~~~~~~~~~~-~g~~l~s~~ 249 (420)
T 4gga_A 180 -KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATL-----SGHSQEVCGLRWAP-DGRHLASGG 249 (420)
T ss_dssp -EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEE-----ECCSSCEEEEEECT-TSSEEEEEE
T ss_pred -cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEe-----cccccceeeeeecC-CCCeeeeee
Confidence 24567889999999988864 5799999999999999876533 2333 57889999999987 677999999
Q ss_pred CCCcEEEEEccCCc---cceEEEecccCCeeEEEEccCC-CEEEE--eeCCCeEEEEECCCCceeEEEeeccCCCCCCCe
Q 016974 227 CDSTARLWDTRVAS---RAVRTFHGHEGDVNTVKFFPDG-NRFGT--GSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 227 ~d~~i~vwd~~~~~---~~~~~~~~h~~~v~~v~~sp~g-~~l~s--~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v 300 (379)
.|+.|++||..... ..+.....|...|.+++|+|++ ..+++ |+.|++|++||++++..+..+.. ...+
T Consensus 250 ~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~------~~~v 323 (420)
T 4gga_A 250 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA------HSQV 323 (420)
T ss_dssp TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC------SSCE
T ss_pred ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc------ccce
Confidence 99999999987543 2456677899999999999965 45554 45899999999999987766543 1358
Q ss_pred EEEEEccCCCEEEEEE--ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 301 TSIAFSISGRLLFAGY--SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.++.|+|+++.+++++ .||.|+|||..+++.+.++ .+|.+.|++++|+|||++|||||.|++|+||++..
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l----~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 8999999999998875 7899999999999888877 68999999999999999999999999999999865
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-40 Score=304.66 Aligned_cols=286 Identities=21% Similarity=0.383 Sum_probs=238.6
Q ss_pred cccccccc--EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeec-CCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 62 TLQGHAGK--VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL-PCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 62 ~l~gH~~~--v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
...+|... +.+++|++ +.+++++.|++|++||..+++....+.. +...|.+++|+|++++|++++.|+.+++||+
T Consensus 86 ~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 86 DAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp ECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 34477765 44566664 5788999999999999999998877776 6788999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCC-CeeEEEecCccccCCccCeEEEEEeCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT-GLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
.... ....+.+|...|.++.|.+ ..|++++.|+.|++||++. +.....+ .+|...|.++.+++
T Consensus 164 ~~~~-------~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~~~- 227 (401)
T 4aez_A 164 ESQT-------KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTL-----QGHSSEVCGLAWRS- 227 (401)
T ss_dssp TTCC-------EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEE-----ECCSSCEEEEEECT-
T ss_pred cCCe-------EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEE-----cCCCCCeeEEEEcC-
Confidence 7532 4566779999999999953 5899999999999999984 3334433 57889999999998
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCC-EEEEee--CCCeEEEEECCCCceeEEEeeccCC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGN-RFGTGS--DDGTCRLFDIRTGHQLQVYYQQHGE 294 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~~ 294 (379)
++.+|++|+.|+.|++||++.. .....+.+|...|.+++|+|++. ++++++ .|+.|++||+++++.+..+..
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~---- 302 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSS-IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA---- 302 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCS-SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC----
T ss_pred CCCEEEEEeCCCeEEEccCCCC-CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC----
Confidence 7789999999999999999865 56777889999999999999764 556654 799999999999988766532
Q ss_pred CCCCCeEEEEEccCCCEEEEE--EecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEec
Q 016974 295 NEIPHVTSIAFSISGRLLFAG--YSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 295 ~~~~~v~~~~fs~~g~~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
...|.+++|+|+|++++++ +.||.|++||..+++...... ..+|...|.+++|+|+|++|++++.||+|++|++
T Consensus 303 --~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~--~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 303 --GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVD--IPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp --SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEE--EECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred --CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEE--ecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 2359999999999999994 489999999988765443321 1578999999999999999999999999999998
Q ss_pred Cc
Q 016974 373 GG 374 (379)
Q Consensus 373 ~~ 374 (379)
..
T Consensus 379 ~~ 380 (401)
T 4aez_A 379 YD 380 (401)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 46
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5e-40 Score=295.02 Aligned_cols=253 Identities=21% Similarity=0.394 Sum_probs=216.2
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
...+|.+|...|.+++|+|++++|+||+.|++|++||+.+++....+..|...|.+++|+|++.++++++.|++|++||+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCC-----CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEE
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-----DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVS 213 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
.. .....+.+|...|.++.|.|.. ...+++++.|++|++||+.+......+ .+|...|.+++
T Consensus 137 ~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~ 203 (319)
T 3frx_A 137 KG--------QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-----IGHNSNINTLT 203 (319)
T ss_dssp TS--------CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-----CCCCSCEEEEE
T ss_pred CC--------CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-----cCCCCcEEEEE
Confidence 63 1445678999999999999853 347999999999999999987766555 57999999999
Q ss_pred EeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeecc-
Q 016974 214 ISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH- 292 (379)
Q Consensus 214 ~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~- 292 (379)
++| ++++|++|+.|+.|++||+... +.+..+.. ...|.+++|+|++.+|++++.+ .+++|++..+..+..+....
T Consensus 204 ~sp-~g~~l~s~~~dg~i~iwd~~~~-~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~ 279 (319)
T 3frx_A 204 ASP-DGTLIASAGKDGEIMLWNLAAK-KAMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFA 279 (319)
T ss_dssp ECT-TSSEEEEEETTCEEEEEETTTT-EEEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCT
T ss_pred EcC-CCCEEEEEeCCCeEEEEECCCC-cEEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcccc
Confidence 997 7789999999999999999865 55666664 4689999999999999888765 59999998765554442211
Q ss_pred --CCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCC
Q 016974 293 --GENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLL 328 (379)
Q Consensus 293 --~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~ 328 (379)
...+...+.+++|+|+|++|++|+.||.|++||+.+
T Consensus 280 ~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 280 GYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 112345689999999999999999999999999754
No 47
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.1e-40 Score=297.64 Aligned_cols=246 Identities=20% Similarity=0.388 Sum_probs=211.6
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc----eeeEeecCCcceEEEEECCCCCEEEEeeCCCcEE
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ----KTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCS 134 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~ 134 (379)
...++.+|...|.+++|+|++++|++|+.|+.|++||+.++. ....+..|...+.++.|++++. +++++.|+.|+
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~ 167 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEE
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEE
Confidence 445678899999999999999999999999999999997753 3456778889999999998876 88999999999
Q ss_pred EEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE
Q 016974 135 IFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI 214 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
+||+.... ....+.+|.+.|.+++|+|++ .++++|+.|++|++||++++.....+ .+|...|.+++|
T Consensus 168 ~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~ 234 (340)
T 1got_B 168 LWDIETGQ-------QTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTF-----TGHESDINAICF 234 (340)
T ss_dssp EEETTTTE-------EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEE-----CCCSSCEEEEEE
T ss_pred EEECCCCc-------EEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEE-----cCCcCCEEEEEE
Confidence 99987532 456778999999999999975 68999999999999999998777665 578999999999
Q ss_pred eCCCCcEEEEecCCCcEEEEEccCCccceEEEe--cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeecc
Q 016974 215 SGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH--GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 292 (379)
Q Consensus 215 ~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 292 (379)
+| ++++|++|+.|+.|++||++.. ..+..+. .+...|.+++|+|+|++|++|+.|+.|++||+.+++.+..+..
T Consensus 235 ~p-~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-- 310 (340)
T 1got_B 235 FP-NGNAFATGSDDATCRLFDLRAD-QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG-- 310 (340)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--
T ss_pred cC-CCCEEEEEcCCCcEEEEECCCC-cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeec--
Confidence 97 6789999999999999999865 3444443 2334799999999999999999999999999998887766533
Q ss_pred CCCCCCCeEEEEEccCCCEEEEEEecCcEEEEe
Q 016974 293 GENEIPHVTSIAFSISGRLLFAGYSNGDCYVWD 325 (379)
Q Consensus 293 ~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd 325 (379)
+...|.+++|+|+|++|++|+.||.|++||
T Consensus 311 ---h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 311 ---HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ---CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ---CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 345799999999999999999999999996
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.8e-41 Score=301.26 Aligned_cols=255 Identities=17% Similarity=0.239 Sum_probs=203.5
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc--eeeEeecCCcceEEEEECC--CCCEEEEeeCCCcEEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSP--TGQSVACGGLDSVCSIF 136 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~--~g~~l~~~~~d~~i~iw 136 (379)
..+.+|.+.|++++|+|++++|+||+.|++|+|||+.++. ....+..|...|.+++|+| ++++|++++.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3578999999999999999999999999999999998765 4567889999999999986 48999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
|+... .......+.+|...|.+++|+|+. +.+|++|+.|++|++||+..+...... ....+|...+.++.|+
T Consensus 87 d~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~--~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 87 REENG-----TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK--KINNAHTIGCNAVSWA 159 (316)
T ss_dssp CCSSS-----CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC--CBTTSSSSCBCCCEEC
T ss_pred ECCCC-----cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee--eeeccccCCcceEEEc
Confidence 98742 222445678899999999999973 468999999999999999875322111 1225788889999998
Q ss_pred CCC----------------CcEEEEecCCCcEEEEEccCCc--cceEEEecccCCeeEEEEccCC----CEEEEeeCCCe
Q 016974 216 GSN----------------SRMFVSGSCDSTARLWDTRVAS--RAVRTFHGHEGDVNTVKFFPDG----NRFGTGSDDGT 273 (379)
Q Consensus 216 ~~~----------------~~~l~sg~~d~~i~vwd~~~~~--~~~~~~~~h~~~v~~v~~sp~g----~~l~s~s~D~~ 273 (379)
|.. +++|++|+.|+.|++||++... .....+.+|...|.+++|+|++ .+|++++.|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~ 239 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR 239 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe
Confidence 742 3689999999999999986432 3456778999999999999986 88999999999
Q ss_pred EEEEECCCCc----eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 274 CRLFDIRTGH----QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 274 i~iwd~~~~~----~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
|++||+.+.. ....+ .. +...|.+++|+|+|++|++|+.||+|++|+..
T Consensus 240 v~iw~~~~~~~~~~~~~~~-~~----~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLL-HK----FNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEECSSTTCCCCBCCEE-EE----CSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEEccCccccchhhhhh-hc----CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9999987621 11111 11 23469999999999999999999999999853
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-39 Score=306.09 Aligned_cols=290 Identities=20% Similarity=0.338 Sum_probs=242.3
Q ss_pred eEeeccccccccE-EEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 58 VCCRTLQGHAGKV-YSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 58 ~~~~~l~gH~~~v-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
....+|.+|.+.| .++.+ ++++|++|+.||+|++||+.+++....+..|...|.+++|+|++ ++++++.|++|++|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 3456899999885 66666 56799999999999999999999999999999999999999988 99999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecC-CCceEEEeeCCCeEEEeecCCCeeEEEec-----------------
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPD-EDTHLITSSGDQTCVLWDITTGLRTSVFG----------------- 198 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~----------------- 198 (379)
|+.+.. ....+.+|...|.+++|++. ++.++++|+.|++|++||+.++.......
T Consensus 189 d~~~~~-------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 189 DIKKGC-------CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp ETTTTE-------EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred ECCCCc-------EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 997532 45677899999999999963 34689999999999999998764321100
Q ss_pred -CccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEE
Q 016974 199 -GEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLF 277 (379)
Q Consensus 199 -~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iw 277 (379)
.....+|...+.++.. +++++++|+.|+.|++||++.. +.+..+.+|...|.+++|+|+++++++|+.|++|++|
T Consensus 262 ~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 262 FVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp EEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred EEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 0112578888888754 4568999999999999999865 6678889999999999999999999999999999999
Q ss_pred ECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCe
Q 016974 278 DIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSA 357 (379)
Q Consensus 278 d~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~ 357 (379)
|+++++.+..+.. +...|.+++|+ +++|++|+.||.|++||..+....... .|...+..++|+|++++
T Consensus 338 d~~~~~~~~~~~~-----h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 338 DLENGELMYTLQG-----HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-----HHTNLSAITTFYVSDNI 405 (464)
T ss_dssp ETTTTEEEEEECC-----CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-----ECTTCCCEEEEEECSSE
T ss_pred ECCCCcEEEEEeC-----CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-----cCCCCccEEEEEeCCCE
Confidence 9999987766532 34569999997 589999999999999999887655543 35667888899999999
Q ss_pred EEEeeCCCcEEEEecCc
Q 016974 358 LCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 358 l~s~s~D~~i~vw~~~~ 374 (379)
|++|+ |++|++|++..
T Consensus 406 l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 406 LVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp EEEEE-TTEEEEEETTT
T ss_pred EEEec-CCeEEEEECCC
Confidence 99998 99999999876
No 50
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.2e-40 Score=292.49 Aligned_cols=257 Identities=19% Similarity=0.257 Sum_probs=206.0
Q ss_pred EeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecC-CCceEEEeeCCCe
Q 016974 104 AIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPD-EDTHLITSSGDQT 182 (379)
Q Consensus 104 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~ 182 (379)
.+..|...|.+++|+|+|++|++++.|++|+||++.... ......+.+|.+.|.+++|+|+ .+.+|++|+.|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-----~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-----cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 356788899999999999999999999999999986421 1245678899999999999864 3568999999999
Q ss_pred EEEeecCCCe--eEEEecCccccCCccCeEEEEEeCCC-CcEEEEecCCCcEEEEEccCCcc-ceEEEecccCCeeEEEE
Q 016974 183 CVLWDITTGL--RTSVFGGEFQSGHTADVLSVSISGSN-SRMFVSGSCDSTARLWDTRVASR-AVRTFHGHEGDVNTVKF 258 (379)
Q Consensus 183 i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~~-~~~~~~~h~~~v~~v~~ 258 (379)
|++||+.++. ....+ .+|...|.+++|+|.. +.+|++|+.|+.|++||++.... ....+.+|...|.+++|
T Consensus 79 v~iWd~~~~~~~~~~~~-----~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~ 153 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (297)
T ss_dssp EEEEEBSSSCBCCCEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEE
T ss_pred EEEEEcCCCceEEEEEe-----ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEee
Confidence 9999998763 22222 5688999999999842 67999999999999999986532 24567899999999999
Q ss_pred ccC-------------CCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCC---CEEEEEEecCcEE
Q 016974 259 FPD-------------GNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISG---RLLFAGYSNGDCY 322 (379)
Q Consensus 259 sp~-------------g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g---~~l~sg~~dg~i~ 322 (379)
+|+ +++|++|+.|++|++||++++......... ...+...|.+++|+|++ ++|++|+.|++|+
T Consensus 154 ~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~-l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp CCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred cCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE-ecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 997 579999999999999999876521111100 12234579999999995 8999999999999
Q ss_pred EEeCCCce---EEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 323 VWDTLLAK---VVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 323 iwd~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
+||..... ....+. ...|...|.+++|+|+|++||+++.|++|+||+..
T Consensus 233 iWd~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLK--EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEESSTTSCCEEEESS--SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEeCCCCCccceeeee--cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99986532 111221 14578899999999999999999999999999875
No 51
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.6e-40 Score=328.97 Aligned_cols=294 Identities=21% Similarity=0.371 Sum_probs=252.7
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
..++|.+|.+.|.+++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCC-eeEEEecCccccCCccCeEEEEEeCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG-LRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
.+.. ....+.+|.+.|.+++|+|++ ..|++++.|++|++||+.++ .....+ .+|...+.++.|+|.
T Consensus 85 ~~~~-------~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~-----~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 85 NTGE-------KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTF-----EGHEHFVMCVAFNPK 151 (814)
T ss_dssp TTCC-------EEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEE-----ECCSSCEEEEEEETT
T ss_pred CCCc-------EEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEE-----cCCCCcEEEEEEEcC
Confidence 7532 445678899999999999986 57999999999999999886 444443 578889999999986
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEcc--CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP--DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
++.++++++.||.|++||+...........+|...+.+++|+| ++.+|++++.|+.|++||+++++.+..+..
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----- 226 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG----- 226 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-----
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-----
Confidence 7789999999999999999765443333334458899999999 999999999999999999999887666532
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCe-EEEeeCCCcEEEEecCc
Q 016974 296 EIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSA-LCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 296 ~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~-l~s~s~D~~i~vw~~~~ 374 (379)
+...|.+++|+|+|++|++|+.||.|++||..+++....+ ..|...|.+++|+|++.. +++++.|+.+.+|++..
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL----NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE----CCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe----ecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 2346999999999999999999999999999888877666 567889999999999873 24455577788888654
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=287.52 Aligned_cols=277 Identities=21% Similarity=0.393 Sum_probs=229.1
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEee--cCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIK--LPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
.++|+||+++ +||+| .|++|+|||+.+++..+.+. .|...|.+++|+|+|+++++|+.|++|++|++...
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~------ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ------ 99 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT------
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc------
Confidence 4679999875 66655 59999999999999888776 45677999999999999999999999999998753
Q ss_pred cceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeE-EEecCccccCCccCeEEEEEeCCCCcEEEEec
Q 016974 148 LPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRT-SVFGGEFQSGHTADVLSVSISGSNSRMFVSGS 226 (379)
Q Consensus 148 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 226 (379)
...+.+.+|...+.++.+.+ ..+++++.++.+++|+...+... ..+ .+|...+..+.+.+ +++++++++
T Consensus 100 -~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~l~s~~ 169 (318)
T 4ggc_A 100 -KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATL-----SGHSQEVCGLRWAP-DGRHLASGG 169 (318)
T ss_dssp -EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEE-----ECCSSCEEEEEECT-TSSEEEEEE
T ss_pred -eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEE-----cCccCceEEEEEcC-CCCEEEEEe
Confidence 24567789998888776653 57999999999999998775332 222 57888899998886 667899999
Q ss_pred CCCcEEEEEccCCcc---ceEEEecccCCeeEEEEccCCCEE---EEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCe
Q 016974 227 CDSTARLWDTRVASR---AVRTFHGHEGDVNTVKFFPDGNRF---GTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 227 ~d~~i~vwd~~~~~~---~~~~~~~h~~~v~~v~~sp~g~~l---~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v 300 (379)
.|+.|++||++.... .......|.+.|.+++++|++..+ ++++.|++|++||.+.......... ...+
T Consensus 170 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~------~~~v 243 (318)
T 4ggc_A 170 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA------HSQV 243 (318)
T ss_dssp TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC------SSCE
T ss_pred cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc------eeee
Confidence 999999999975432 345566788899999999976543 4677899999999988776544322 2358
Q ss_pred EEEEEccCCCEEEEEE--ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 301 TSIAFSISGRLLFAGY--SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..+.|+|+++.+++++ .|+.|++||+.+++.+.++ .+|.+.|++++|+|||++|||||.|++|+||++..
T Consensus 244 ~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l----~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 244 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEE----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 9999999999888765 7999999999999888877 68999999999999999999999999999999865
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.8e-41 Score=314.15 Aligned_cols=282 Identities=18% Similarity=0.275 Sum_probs=231.2
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
.+++++|+|++++|++|+.|++|++||..+++....+..+ ..+....|+|++++|++++.|+.+++||+...
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------- 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN------- 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-------
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-------
Confidence 3557999999999999999999999999877665555555 44555678999999999999999999998642
Q ss_pred ceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC
Q 016974 149 PVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD 228 (379)
Q Consensus 149 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 228 (379)
.....+.+|.+.|.+++|+|++ .+|++++.|++|++||+.++.....+ .+|...|.+++|+| ++++|++++.|
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~~l~s~~~d 202 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTL-----IGHRATVTDIAIID-RGRNVLSASLD 202 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEE-----ECCSSCEEEEEEET-TTTEEEEEETT
T ss_pred ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEE-----cCCCCcEEEEEEcC-CCCEEEEEcCC
Confidence 2345567999999999999975 58999999999999999988766555 57999999999997 67789999999
Q ss_pred CcEEEEEccCCccceEEEec---cc---------------------CCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce
Q 016974 229 STARLWDTRVASRAVRTFHG---HE---------------------GDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 284 (379)
Q Consensus 229 ~~i~vwd~~~~~~~~~~~~~---h~---------------------~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~ 284 (379)
+.|++||++.. +.+..+.. |. ..+.+++|+|++++|++++.||.|++||+++++.
T Consensus 203 ~~v~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 281 (420)
T 3vl1_A 203 GTIRLWECGTG-TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ 281 (420)
T ss_dssp SCEEEEETTTT-EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE
T ss_pred CcEEEeECCCC-ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce
Confidence 99999999865 55666654 33 3444555678999999999999999999999887
Q ss_pred eEEEeeccCCCCCCCeEEEEEccCCC-EEEEEEecCcEEEEeCCCceE-EEecccccCCccCceeEEEECCCCCeEEEee
Q 016974 285 LQVYYQQHGENEIPHVTSIAFSISGR-LLFAGYSNGDCYVWDTLLAKV-VLNLGSLQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
+..+... +...|.+++|+|+++ +|++|+.||.|++||+.+++. ...+ ...|...|.++.+ +++++|++++
T Consensus 282 ~~~~~~~----~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~---~~~~~~~v~~~~~-~~~~~l~s~~ 353 (420)
T 3vl1_A 282 TIQLPSK----FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF---LINEGTPINNVYF-AAGALFVSSG 353 (420)
T ss_dssp EEEECCT----TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE---EESTTSCEEEEEE-ETTEEEEEET
T ss_pred eEEcccc----cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhh---hccCCCCceEEEe-CCCCEEEEec
Confidence 6665332 345799999999999 999999999999999987642 2222 1347788998865 5789999999
Q ss_pred CCCcEEEEecCc
Q 016974 363 WDTNLKIWAFGG 374 (379)
Q Consensus 363 ~D~~i~vw~~~~ 374 (379)
.|++|++|++..
T Consensus 354 ~d~~v~iw~~~~ 365 (420)
T 3vl1_A 354 FDTSIKLDIISD 365 (420)
T ss_dssp TTEEEEEEEECC
T ss_pred CCccEEEEeccC
Confidence 999999999765
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.1e-39 Score=301.54 Aligned_cols=297 Identities=11% Similarity=0.166 Sum_probs=237.9
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 141 (379)
.+.+| ..+....|++++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++||+...
T Consensus 93 ~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 93 MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 34455 44555678999999999999999999999988888888889999999999999999999999999999999753
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC-----
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG----- 216 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----- 216 (379)
. ....+.+|...|.+++|+|++ ..|++++.|++|++||++++.....+... ..|...+.++.+.+
T Consensus 172 ~-------~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 172 S-------NPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRK--ENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp C-------CCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBT--TBTTCCEEEEEEEECCCSS
T ss_pred c-------CceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecC--CCCCCCccEEEEecCCcce
Confidence 2 345678999999999999975 68999999999999999998877666432 23555566655532
Q ss_pred ---------------CCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCC-EEEEeeCCCeEEEEECC
Q 016974 217 ---------------SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGN-RFGTGSDDGTCRLFDIR 280 (379)
Q Consensus 217 ---------------~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~l~s~s~D~~i~iwd~~ 280 (379)
++++++++|+.||.|++||++..........+|...|.+++|+|++. +|++|+.||.|++||++
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 26789999999999999999876544444456889999999999998 99999999999999999
Q ss_pred CCce-eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE---EEec--ccccCCccCceeEEEECCC
Q 016974 281 TGHQ-LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV---VLNL--GSLQNSHEGRITCLGLSAD 354 (379)
Q Consensus 281 ~~~~-~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~---~~~~--~~~~~~h~~~v~~~~~s~d 354 (379)
+++. +..+...+ ...|.++. .+++++|++|+.||.|++||+..... .... ......|.+.|.+++|+|+
T Consensus 322 ~~~~~~~~~~~~~----~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 396 (420)
T 3vl1_A 322 SPECPVGEFLINE----GTPINNVY-FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSD 396 (420)
T ss_dssp CTTSCSEEEEEST----TSCEEEEE-EETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECC
T ss_pred CCcCchhhhhccC----CCCceEEE-eCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccC
Confidence 8754 44443322 23577775 46889999999999999999765311 1111 1112468889999999999
Q ss_pred CC---eEEEeeCCCcEEEEecCc
Q 016974 355 GS---ALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 355 ~~---~l~s~s~D~~i~vw~~~~ 374 (379)
++ .|++++.+|.+++|++..
T Consensus 397 ~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 397 DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SSSSCEEEEEETTTEEEEEESCC
T ss_pred CCCcceEEEEcCCceEEEEeccC
Confidence 99 788888899999999753
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.3e-39 Score=291.63 Aligned_cols=285 Identities=21% Similarity=0.320 Sum_probs=239.8
Q ss_pred ccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCC
Q 016974 66 HAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~ 145 (379)
|.++|.+++|+|||++++++..++.+.+|+............|...|.+++|+|+++++++++ |+.+++|++......
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~- 85 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK- 85 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce-
Confidence 566899999999999999988888887776655555555557888999999999999999999 999999999764321
Q ss_pred CCcceeeee--cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCee--EEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 146 GNLPVSRML--SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLR--TSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 146 ~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
.....+ .+|...|.+++|+|++ ..|++++.|+.|++||+.++.. ...+ ..|...+.++.+++ ++++
T Consensus 86 ---~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~-~~~~ 155 (337)
T 1gxr_A 86 ---SPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTPRIKAEL-----TSSAPACYALAISP-DSKV 155 (337)
T ss_dssp ---SCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--EEEEEE-----ECSSSCEEEEEECT-TSSE
T ss_pred ---eeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCcceeeec-----ccCCCceEEEEECC-CCCE
Confidence 111222 3788999999999975 6899999999999999988752 2222 46888899999997 6778
Q ss_pred EEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeE
Q 016974 222 FVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVT 301 (379)
Q Consensus 222 l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 301 (379)
+++++.|+.|++||++.. +....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. ...+.
T Consensus 156 l~~~~~dg~v~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~------~~~v~ 228 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF------TSQIF 228 (337)
T ss_dssp EEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC------SSCEE
T ss_pred EEEEeCCCcEEEEeCCCC-ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC------CCceE
Confidence 999999999999999865 56778889999999999999999999999999999999999877665421 24589
Q ss_pred EEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 302 SIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 302 ~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+++|+|+|++|++++.||.|++||....+... + ..|..+|.+++|+|++++|++++.|+.|++|++..
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-L----HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCEEE-E----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-E----cCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 99999999999999999999999998776543 2 56889999999999999999999999999999876
No 56
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=294.81 Aligned_cols=248 Identities=21% Similarity=0.388 Sum_probs=212.7
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCC------ceeeEeecCCcceEEEEECCCCCEEEEeeCCCc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTS------QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV 132 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 132 (379)
....+..|...|.+++|+|+++.|++|+.|+++++|++... .....+..|...+.+++|+|++..|++++.|++
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~ 177 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT 177 (354)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc
Confidence 34566778899999999999999999999999999998643 234567788999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 211 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
|++||+.... ....+.+|...|.++.|+|+. +..|++|+.|++|++||++++.....+ .+|...|.+
T Consensus 178 v~lwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~-----~~h~~~v~~ 245 (354)
T 2pbi_B 178 CALWDVESGQ-------LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF-----ETHESDVNS 245 (354)
T ss_dssp EEEEETTTCC-------EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE-----CCCSSCEEE
T ss_pred EEEEeCCCCe-------EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe-----cCCCCCeEE
Confidence 9999997532 456788999999999998863 468999999999999999998877666 578999999
Q ss_pred EEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecc--cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEe
Q 016974 212 VSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGH--EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYY 289 (379)
Q Consensus 212 ~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h--~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~ 289 (379)
++|+| ++.+|++|+.|+.|++||++.. ..+..+..+ ...+.+++|+|+|.+|++|+.|++|++||+.+++.+..+.
T Consensus 246 v~~~p-~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~ 323 (354)
T 2pbi_B 246 VRYYP-SGDAFASGSDDATCRLYDLRAD-REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF 323 (354)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEeC-CCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE
Confidence 99997 6679999999999999999865 334444433 3478999999999999999999999999999988776553
Q ss_pred eccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEe
Q 016974 290 QQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWD 325 (379)
Q Consensus 290 ~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd 325 (379)
. +...|++++|+|+|++|++|+.||+|++|+
T Consensus 324 ~-----h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 324 G-----HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp C-----CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred C-----CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 2 345799999999999999999999999996
No 57
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2e-39 Score=293.11 Aligned_cols=286 Identities=16% Similarity=0.187 Sum_probs=237.5
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc---eeeEeecCCcceEEEEECCCCC-EEEEeeCCCcEEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ---KTHAIKLPCAWVMTCAFSPTGQ-SVACGGLDSVCSIF 136 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw 136 (379)
....+|.+.|++++|+|++++|++|+.|++|++||+.++. ....+..|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 4566899999999999999999999999999999998776 3455567888999999999999 99999999999999
Q ss_pred Ec-CCCCCCCCCcceeeeecc--cccceEEEEEecCCCceEEEeeCCCeEEEeecCC---------CeeEEEecCccccC
Q 016974 137 NL-NSPTDKDGNLPVSRMLSG--HKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT---------GLRTSVFGGEFQSG 204 (379)
Q Consensus 137 ~~-~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---------~~~~~~~~~~~~~~ 204 (379)
++ .... ...+.+ |...|.+++|+| +..|++++.|+.|++||+.+ +..... ..
T Consensus 85 d~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~ 148 (342)
T 1yfq_A 85 DLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN------TK 148 (342)
T ss_dssp CSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS------SS
T ss_pred EeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeE------Ee
Confidence 98 6431 245677 999999999999 46899999999999999876 332222 23
Q ss_pred CccCeEEEEEeCCCCcEEEEecCCCcEEEEEccC-Ccc-ceEEEecccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECCC
Q 016974 205 HTADVLSVSISGSNSRMFVSGSCDSTARLWDTRV-ASR-AVRTFHGHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIRT 281 (379)
Q Consensus 205 h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~-~~~-~~~~~~~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~~ 281 (379)
|...+.++++++. .+++++.|+.|++||++. ... .......|...|.+++|+| +++++++++.|+.|++|++..
T Consensus 149 ~~~~v~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 149 VKNKIFTMDTNSS---RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp SCCCEEEEEECSS---EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred eCCceEEEEecCC---cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 7788999999863 288999999999999986 433 3334557888999999999 999999999999999999987
Q ss_pred C------ceeEEEeeccC----CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCc-cCceeEEE
Q 016974 282 G------HQLQVYYQQHG----ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSH-EGRITCLG 350 (379)
Q Consensus 282 ~------~~~~~~~~~~~----~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h-~~~v~~~~ 350 (379)
. +....+..... ..+...|.+++|+|++++|++|+.||.|++||+.+++.+..+ ..| ..+|.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~~~h~~~v~~~~ 301 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF----AKFNEDSVVKIA 301 (342)
T ss_dssp TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC----CCCSSSEEEEEE
T ss_pred CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh----hcccCCCceEec
Confidence 6 44444432211 012347999999999999999999999999999988887776 566 99999999
Q ss_pred ECCCCCeEEEeeCCCc-EEEEe
Q 016974 351 LSADGSALCTGSWDTN-LKIWA 371 (379)
Q Consensus 351 ~s~d~~~l~s~s~D~~-i~vw~ 371 (379)
|++++|++++.||+ .+.|.
T Consensus 302 --~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 302 --CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp --ECSSEEEEEEECTHHHHCSS
T ss_pred --CCCCeEEEEecCCccccccc
Confidence 99999999999999 55554
No 58
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.6e-39 Score=338.48 Aligned_cols=291 Identities=25% Similarity=0.349 Sum_probs=255.0
Q ss_pred eeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcC
Q 016974 60 CRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 60 ~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~ 139 (379)
...+.+|.+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|+|+++++++.|+.|++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCC
Q 016974 140 SPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
+.. ....+.+|...|.++.|+|++ ...+++|+.|++|++||+.++.....+ .+|...|.+++++| +
T Consensus 688 ~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~sp-~ 754 (1249)
T 3sfz_A 688 TGK-------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-----FGHTNSVNHCRFSP-D 754 (1249)
T ss_dssp TCC-------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-----CCCSSCEEEEEECS-S
T ss_pred CCc-------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-----cCCCCCEEEEEEec-C
Confidence 532 456778999999999999963 357889999999999999998877665 57999999999997 6
Q ss_pred CcEEEEecCCCcEEEEEccCCccceEEEe-------------cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee
Q 016974 219 SRMFVSGSCDSTARLWDTRVASRAVRTFH-------------GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 285 (379)
Q Consensus 219 ~~~l~sg~~d~~i~vwd~~~~~~~~~~~~-------------~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~ 285 (379)
++++++++.||.|++||++... ....+. .+...+.+++|+|+|..+++++ ++.+.+||+.++..+
T Consensus 755 ~~~l~s~s~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 755 DELLASCSADGTLRLWDVRSAN-ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLL 832 (1249)
T ss_dssp TTEEEEEESSSEEEEEEGGGTE-EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred CCEEEEEECCCeEEEEeCCCCc-ccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCce
Confidence 7799999999999999997653 232222 1234788999999999999887 689999999998877
Q ss_pred EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC
Q 016974 286 QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
..+... +...|.+++|+|+++++++|+.||.|++||..++.....+ .+|.+.|.+++|+|+|+.|++++.|+
T Consensus 833 ~~~~~~----~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~----~~h~~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 833 AEIHTG----HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADC----RGHLSWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp EEEECS----SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEE----CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEcCC----CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeec----CCCccceEEEEECCCCCEEEEEeCCC
Confidence 665433 2456899999999999999999999999999988877766 67999999999999999999999999
Q ss_pred cEEEEecC
Q 016974 366 NLKIWAFG 373 (379)
Q Consensus 366 ~i~vw~~~ 373 (379)
+|++|++.
T Consensus 905 ~v~vw~~~ 912 (1249)
T 3sfz_A 905 TIRVWETK 912 (1249)
T ss_dssp CEEEEEHH
T ss_pred eEEEEEcc
Confidence 99999965
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=302.63 Aligned_cols=303 Identities=13% Similarity=0.195 Sum_probs=230.2
Q ss_pred cccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc-----------eeeEeecCC------------cceEEEEECCCC
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ-----------KTHAIKLPC------------AWVMTCAFSPTG 121 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~g 121 (379)
.|.+.|++++|+|++++||+|+.||.|+|||+.+++ ....+..|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378899999999999999999999999999998776 467788887 789999999998
Q ss_pred --CEEEEeeCCCcEEEEEcCCCCCC---------CC-----------Ccc-------------eeeeecccccceEEEEE
Q 016974 122 --QSVACGGLDSVCSIFNLNSPTDK---------DG-----------NLP-------------VSRMLSGHKGYVSCCQY 166 (379)
Q Consensus 122 --~~l~~~~~d~~i~iw~~~~~~~~---------~~-----------~~~-------------~~~~~~~h~~~v~~~~~ 166 (379)
.++++++.|+.|++|++...... .+ ..+ ......+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 89999999999999998642110 00 000 00123689999999999
Q ss_pred ecCCCceEEEeeCCCeEEEeecCCC-eeEEEec--CccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc--
Q 016974 167 VPDEDTHLITSSGDQTCVLWDITTG-LRTSVFG--GEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASR-- 241 (379)
Q Consensus 167 ~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~-- 241 (379)
+|++ ..|++| .|++|++||+.+. .....+. .....+|...|.+++|+|.+.++|++|+.||.|++||++....
T Consensus 186 ~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 9975 578888 8999999999843 3332211 0112578899999999985548999999999999999986532
Q ss_pred -ceEEEecccC------------CeeEEEEccCCCEEEEeeCCCeEEEEECCC-CceeEEEeeccCCC----------CC
Q 016974 242 -AVRTFHGHEG------------DVNTVKFFPDGNRFGTGSDDGTCRLFDIRT-GHQLQVYYQQHGEN----------EI 297 (379)
Q Consensus 242 -~~~~~~~h~~------------~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~~~----------~~ 297 (379)
....+.+|.. .|.+++|+|+|++|++++. +.|++||+++ ++.+..+....... ..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 1577888876 8999999999999999999 9999999987 66655543221100 00
Q ss_pred CCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccc----------------------------cCCccCceeEE
Q 016974 298 PHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSL----------------------------QNSHEGRITCL 349 (379)
Q Consensus 298 ~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~----------------------------~~~h~~~v~~~ 349 (379)
..+..++|+|+|++|++|+.||.|++||+.+++.+...... ...+...|.++
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 01345999999999999999999999999887654311100 01345678999
Q ss_pred EECCCCCeEEEeeCCCcEEEEe
Q 016974 350 GLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 350 ~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
+|+|++++||+++.|+ +++|.
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEE
T ss_pred EECCCCCEEEEEecce-eeeec
Confidence 9999999999998876 77775
No 60
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=291.32 Aligned_cols=259 Identities=19% Similarity=0.299 Sum_probs=209.7
Q ss_pred cccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc--eeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC
Q 016974 63 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~ 140 (379)
..+|.+.|.+++|+|++++|++|+.|++|++||..++. ....+..|...|.+++|+|+|++|++++.|+.|++||+..
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 47899999999999999999999999999999987764 4677888999999999999999999999999999999975
Q ss_pred CCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeE--EEecCccccCCccCeEEEEEeCCC
Q 016974 141 PTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRT--SVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 141 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
.. .......+.+|...|.+++|+|++ .+|++++.|++|++||+.++... ..+ .+|...|.+++|+| +
T Consensus 137 ~~----~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~-----~~h~~~v~~l~~sp-~ 205 (345)
T 3fm0_A 137 ED----EYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATL-----EGHESTVWSLAFDP-S 205 (345)
T ss_dssp TS----CEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECT-T
T ss_pred CC----CeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEe-----cCCCCceEEEEECC-C
Confidence 32 223456678999999999999975 58999999999999999876432 233 57999999999997 6
Q ss_pred CcEEEEecCCCcEEEEEccCCc--------------cceEEEec-ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc
Q 016974 219 SRMFVSGSCDSTARLWDTRVAS--------------RAVRTFHG-HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH 283 (379)
Q Consensus 219 ~~~l~sg~~d~~i~vwd~~~~~--------------~~~~~~~~-h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~ 283 (379)
+++|++|+.|+.|++||..... ..+..+.+ |...|++++|+|++..|++++.|+.|++|+...+.
T Consensus 206 g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 206 GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp SSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred CCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 7899999999999999964321 12334444 88899999999999999999999999999986543
Q ss_pred e----eEEEeeccCCCCCCCeEEEEEccCCC-EEEEEEecCcEEEEeCCCceEE
Q 016974 284 Q----LQVYYQQHGENEIPHVTSIAFSISGR-LLFAGYSNGDCYVWDTLLAKVV 332 (379)
Q Consensus 284 ~----~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~~~~~ 332 (379)
. ...+.......+...|++++|+|++. +|++|+.||+|++|+....+..
T Consensus 286 ~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred CcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 1 11111111123456799999999984 9999999999999998766543
No 61
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.7e-39 Score=300.02 Aligned_cols=277 Identities=25% Similarity=0.431 Sum_probs=234.3
Q ss_pred cccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCC
Q 016974 63 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPT 142 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~ 142 (379)
..+|...|++++| ++++|++|+.||+|++||..+++....+..|...|.+++| +++++++|+.|+.|++||+.+..
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 3467778999987 7889999999999999999999999999999999999988 78999999999999999997532
Q ss_pred CCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEE
Q 016974 143 DKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMF 222 (379)
Q Consensus 143 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 222 (379)
....+.+|...|.++.|++ ..+++|+.|++|++||+.++...... ....+|...|.++.+. ++++
T Consensus 205 -------~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~---~~~l 269 (435)
T 1p22_A 205 -------MLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLR--RVLVGHRAAVNVVDFD---DKYI 269 (435)
T ss_dssp -------EEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEE--EEECCCSSCEEEEEEE---TTEE
T ss_pred -------EEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceee--eEecCCCCcEEEEEeC---CCEE
Confidence 4566789999999999964 47999999999999999876543211 1125788999999984 4689
Q ss_pred EEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEE
Q 016974 223 VSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTS 302 (379)
Q Consensus 223 ~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 302 (379)
++|+.||.|++||++.. ..+..+.+|...|.+++| ++.++++|+.|++|++||+++++.+..+.. +...|.+
T Consensus 270 ~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~ 341 (435)
T 1p22_A 270 VSASGDRTIKVWNTSTC-EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-----HEELVRC 341 (435)
T ss_dssp EEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC-----CSSCEEE
T ss_pred EEEeCCCeEEEEECCcC-cEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC-----CcCcEEE
Confidence 99999999999999865 567888999999999998 468999999999999999999988776532 3456899
Q ss_pred EEEccCCCEEEEEEecCcEEEEeCCCce---------EEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 303 IAFSISGRLLFAGYSNGDCYVWDTLLAK---------VVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 303 ~~fs~~g~~l~sg~~dg~i~iwd~~~~~---------~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
++| ++++|++|+.||.|++||+..+. ....+ .+|.+.|++++| ++++|++|+.||+|++|++.
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL----VEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE----CCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeec----cCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 988 78999999999999999986554 44444 579999999999 78899999999999999987
Q ss_pred c
Q 016974 374 G 374 (379)
Q Consensus 374 ~ 374 (379)
.
T Consensus 414 ~ 414 (435)
T 1p22_A 414 N 414 (435)
T ss_dssp -
T ss_pred C
Confidence 6
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.8e-39 Score=310.96 Aligned_cols=296 Identities=17% Similarity=0.271 Sum_probs=233.3
Q ss_pred EeeccccccccEEEEEeeCCCC-eEEEEcCCCcEEEEECCCCceeeEeecCCc---ceEEEEECCC-CCEEEEeeCCCcE
Q 016974 59 CCRTLQGHAGKVYSLDWTSERN-RIVSASQDGRLIVWNALTSQKTHAIKLPCA---WVMTCAFSPT-GQSVACGGLDSVC 133 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~-g~~l~~~~~d~~i 133 (379)
....+.+|.+.|++++|+|+++ .|++++.|++|++||..+++....+..|.. .+.+++|+|+ ++++++++.|+.+
T Consensus 152 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 152 SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 4567889999999999999998 799999999999999999999999998888 9999999999 9999999999999
Q ss_pred EEEEcCCCCCCCCCcceeeee-c---ccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCc---------
Q 016974 134 SIFNLNSPTDKDGNLPVSRML-S---GHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE--------- 200 (379)
Q Consensus 134 ~iw~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--------- 200 (379)
++||+.... ....+ . +|...|.++.|+ + +..|++++.|+.|++||+.++.....+...
T Consensus 232 ~vwd~~~~~-------~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 232 SCFDGKSGE-------FLKYIEDDQEPVQGGIFALSWL-D-SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp EEEETTTCC-------EEEECCBTTBCCCSCEEEEEES-S-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred EEEECCCCC-------EeEEecccccccCCceEEEEEc-C-CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 999987532 33444 4 899999999999 4 568999999999999999876544333211
Q ss_pred -------------------------------cccCCc---------------------------------cCeEEEEEeC
Q 016974 201 -------------------------------FQSGHT---------------------------------ADVLSVSISG 216 (379)
Q Consensus 201 -------------------------------~~~~h~---------------------------------~~v~~~~~~~ 216 (379)
...+|. ..|.++.+.+
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~ 382 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK 382 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCS
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECC
Confidence 001233 3333333311
Q ss_pred CC-----------------------------------------------------------------------CcEEEEe
Q 016974 217 SN-----------------------------------------------------------------------SRMFVSG 225 (379)
Q Consensus 217 ~~-----------------------------------------------------------------------~~~l~sg 225 (379)
.. +++++++
T Consensus 383 ~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 462 (615)
T 1pgu_A 383 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVG 462 (615)
T ss_dssp TTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEE
T ss_pred CcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEe
Confidence 00 2233444
Q ss_pred cC-CCcEEEEEccCCccce-EEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEE
Q 016974 226 SC-DSTARLWDTRVASRAV-RTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSI 303 (379)
Q Consensus 226 ~~-d~~i~vwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 303 (379)
+. |+.|++||+... ... ..+.+|...|.+++|+|+|++|++++.|+.|++||+.+++.+..+... +...|+++
T Consensus 463 ~~~d~~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----h~~~v~~~ 537 (615)
T 1pgu_A 463 LEEGNTIQVFKLSDL-EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF----RTSKINAI 537 (615)
T ss_dssp ETTTSCEEEEETTEE-EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC----CSSCEEEE
T ss_pred ecCCCeEEEEECCCc-cccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC----CCCceeEE
Confidence 44 455555554422 111 445678899999999999999999999999999999998876554221 34579999
Q ss_pred EEcc----------CCCEEEEEEecCcEEEEeCCCc-eEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEec
Q 016974 304 AFSI----------SGRLLFAGYSNGDCYVWDTLLA-KVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 304 ~fs~----------~g~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
+|+| ++++|++|+.||.|++||+.++ +....+ .+|...|++++|+||++ |++++.|++|++|++
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL----NAHKDGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET----TSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhh----hcCccceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 9999 9999999999999999999886 555555 67999999999999999 999999999999998
Q ss_pred C
Q 016974 373 G 373 (379)
Q Consensus 373 ~ 373 (379)
.
T Consensus 613 ~ 613 (615)
T 1pgu_A 613 V 613 (615)
T ss_dssp C
T ss_pred e
Confidence 5
No 63
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.4e-38 Score=295.29 Aligned_cols=289 Identities=27% Similarity=0.442 Sum_probs=247.8
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
..+..++.+|.+.|++++|+ ++.|++|+.||+|++||+.+++....+..|...|.+++|+ ++.+++++.|+.+++|
T Consensus 149 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~w 224 (445)
T 2ovr_B 149 GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVW 224 (445)
T ss_dssp CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEE
T ss_pred CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEE
Confidence 34567889999999999997 5699999999999999999999999999999999999985 6789999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 216 (379)
|+.... ....+.+|...|.++.| + +..+++|+.|+.|++||+.++.....+ .+|...+.++.+
T Consensus 225 d~~~~~-------~~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~-- 287 (445)
T 2ovr_B 225 DIETGQ-------CLHVLMGHVAAVRCVQY--D-GRRVVSGAYDFMVKVWDPETETCLHTL-----QGHTNRVYSLQF-- 287 (445)
T ss_dssp ESSSCC-------EEEEEECCSSCEEEEEE--C-SSCEEEEETTSCEEEEEGGGTEEEEEE-----CCCSSCEEEEEE--
T ss_pred ECCCCc-------EEEEEcCCcccEEEEEE--C-CCEEEEEcCCCEEEEEECCCCcEeEEe-----cCCCCceEEEEE--
Confidence 987532 45567889999999998 3 467999999999999999998777666 578889999988
Q ss_pred CCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCC
Q 016974 217 SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENE 296 (379)
Q Consensus 217 ~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 296 (379)
++.++++|+.|+.|++||++.. +.+..+.+|...+.++.+ +++++++|+.||.|++||+++++.+..+... ..+
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~ 361 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGP--NKH 361 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECST--TSC
T ss_pred -CCCEEEEEeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccC--CCC
Confidence 4568999999999999999865 567788899999988877 4679999999999999999999887766432 224
Q ss_pred CCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccc-cCCccCceeEEEECCCCCeEEEeeCCCc----EEEEe
Q 016974 297 IPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSL-QNSHEGRITCLGLSADGSALCTGSWDTN----LKIWA 371 (379)
Q Consensus 297 ~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~~~s~d~~~l~s~s~D~~----i~vw~ 371 (379)
...|.+++|+ +++|++|+.||.|++||+.+++.+..+... ...|.+.|.+++|+|++.+||+|+.||+ |.||+
T Consensus 362 ~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 362 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred CCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 5579999985 689999999999999999988877665221 1368889999999999999999999998 99999
Q ss_pred cCc
Q 016974 372 FGG 374 (379)
Q Consensus 372 ~~~ 374 (379)
++.
T Consensus 440 f~~ 442 (445)
T 2ovr_B 440 FDV 442 (445)
T ss_dssp CCC
T ss_pred CCC
Confidence 975
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.9e-39 Score=291.64 Aligned_cols=305 Identities=13% Similarity=0.188 Sum_probs=221.5
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCC----ceeeEeecCCcceEEEEECC--CCCEEEEeeCCCcEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTS----QKTHAIKLPCAWVMTCAFSP--TGQSVACGGLDSVCS 134 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~s~--~g~~l~~~~~d~~i~ 134 (379)
..+.||.+.|++++|+|++++|++|+.||+|++||+.++ +....+..|...|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 457899999999999999999999999999999999876 35566788999999999999 699999999999999
Q ss_pred EEEcCCCCCCC--CCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCeeEEEec--------Ccccc
Q 016974 135 IFNLNSPTDKD--GNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLRTSVFG--------GEFQS 203 (379)
Q Consensus 135 iw~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~--------~~~~~ 203 (379)
+||+....... ........+.+|...|.+++|+|+. +.+|++++.|+.|++||+.++.....+. .....
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99998643211 1113456677899999999999972 4679999999999999998764321110 00113
Q ss_pred CCccCeEEEEEeCC--CCcEEEEecCCCcEEEEEccCCcc-ceEEEecccCCeeEEEEccCC----CEEEEeeCCCeEEE
Q 016974 204 GHTADVLSVSISGS--NSRMFVSGSCDSTARLWDTRVASR-AVRTFHGHEGDVNTVKFFPDG----NRFGTGSDDGTCRL 276 (379)
Q Consensus 204 ~h~~~v~~~~~~~~--~~~~l~sg~~d~~i~vwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g----~~l~s~s~D~~i~i 276 (379)
.|...+.++.++|. ++.++++++.|+.+.+|+...... .+..+.+|...|++++|+|++ ++|++++.|+.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 67788999999985 477999999999998887664421 356778899999999999998 89999999999999
Q ss_pred EECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE----ecCcEEEEeCCCceEEEecccccCCccCceeEEEEC
Q 016974 277 FDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY----SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLS 352 (379)
Q Consensus 277 wd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~----~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s 352 (379)
||++++........ .........+++...+++.+. ....+.+|+....+.+..+ .+|...|++++|+
T Consensus 245 wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~s 315 (351)
T 3f3f_A 245 FKITEKLSPLASEE-----SLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH----DDHNGEVWSVSWN 315 (351)
T ss_dssp EEEEECC--------------------------------------------CCSEEEEEEEEE----CTTSSCEEEEEEC
T ss_pred EeCCCCcCccccCC-----cccceeccCCCcccccccccccccccceeeeecccccccEEEEE----ecccccEEEEEEc
Confidence 99987644322211 111233344444444554443 3345556665555555554 6799999999999
Q ss_pred CCCCeEEEeeCCCcEEEEecCc
Q 016974 353 ADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 353 ~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
|++++|++|+.||+|+||++..
T Consensus 316 ~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 316 LTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp SSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCEEEEecCCCcEEEEecCc
Confidence 9999999999999999999874
No 65
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-39 Score=288.00 Aligned_cols=256 Identities=20% Similarity=0.242 Sum_probs=197.9
Q ss_pred eecc-cc-ccccEEEEEeeCCCCeEEEEcCCCcEEEEECCC-------CceeeEeecCCcceEEEEECCCCCEEEEeeCC
Q 016974 60 CRTL-QG-HAGKVYSLDWTSERNRIVSASQDGRLIVWNALT-------SQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD 130 (379)
Q Consensus 60 ~~~l-~g-H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 130 (379)
..++ .+ |.+.|++++|+|++++|++|+.|++|+|||... .+....+..|...|.+++|+|+|++|++++.|
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3444 44 999999999999999999999999999999853 34556778899999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCC--eeEEEecCccccCCccC
Q 016974 131 SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTAD 208 (379)
Q Consensus 131 ~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~~h~~~ 208 (379)
++|++||+.... ........+.+|...|.+++|+|++ .+|++|+.|++|++||+.++ .+...+ .+|...
T Consensus 129 ~~v~iwd~~~~~---~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~-----~~h~~~ 199 (330)
T 2hes_X 129 KSVWIWETDESG---EEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVL-----NGHEGT 199 (330)
T ss_dssp SCEEEEECCTTC---CCCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEE-----CCCSSC
T ss_pred CEEEEEeccCCC---CCeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEc-----cCCCCc
Confidence 999999985321 1123456778999999999999975 68999999999999998766 334444 589999
Q ss_pred eEEEEEeCCC-CcEEEEecCCCcEEEEEccCCc-------cceEEEec-ccCCeeEEEEccCCCEEEEeeCCCeEEEEEC
Q 016974 209 VLSVSISGSN-SRMFVSGSCDSTARLWDTRVAS-------RAVRTFHG-HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDI 279 (379)
Q Consensus 209 v~~~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~-------~~~~~~~~-h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~ 279 (379)
|.+++|++.. +.++++|+.|+.|++||++... .....+.+ |...|.+++|++++ +|++++.|++|++||.
T Consensus 200 v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp EEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred EEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 9999999853 5689999999999999986431 12333444 89999999999765 8999999999999998
Q ss_pred CCCceeEEEeeccCCCCCC-CeEEEEEcc--CCCEEEEEEecCcEEEEeCC
Q 016974 280 RTGHQLQVYYQQHGENEIP-HVTSIAFSI--SGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~-~v~~~~fs~--~g~~l~sg~~dg~i~iwd~~ 327 (379)
.++......... ..+.. .|.+++|+| ++++|++|+.||+|++||+.
T Consensus 279 ~~~~~~~~~~~~--~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 279 VDGEWKVFAKRA--LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp ETTEEEEEEEES--CTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred CCCceEEEeccc--cccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 876421111111 11223 699999999 78999999999999999964
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-38 Score=286.81 Aligned_cols=257 Identities=22% Similarity=0.338 Sum_probs=208.0
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
...++.+|...|++++|+|++.+|+||+.|++|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCC---------ceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCe
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDED---------THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADV 209 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---------~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 209 (379)
.... ........+|...|.+++|+|+.. .+|++++.|++|++||.. ......+ .+|...|
T Consensus 148 ~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~-----~~h~~~v 216 (343)
T 2xzm_R 148 LGEC-----KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTF-----KAHESNV 216 (343)
T ss_dssp SSCE-----EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEE-----ECCSSCE
T ss_pred cCCc-----eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEE-----cCccccc
Confidence 6311 001111237889999999999752 579999999999999954 3333333 5788999
Q ss_pred EEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeE--E
Q 016974 210 LSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQ--V 287 (379)
Q Consensus 210 ~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~--~ 287 (379)
.+++|+| ++++|++|+.|+.|++||++........+ .+...|.+++|+|++.++++ +.|+.|++||+.+++... .
T Consensus 217 ~~~~~s~-~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~ 293 (343)
T 2xzm_R 217 NHLSISP-NGKYIATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCT 293 (343)
T ss_dssp EEEEECT-TSSEEEEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEE
T ss_pred eEEEECC-CCCEEEEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEE
Confidence 9999997 67899999999999999996444444444 35567999999999987765 567889999998765433 2
Q ss_pred Eeec------cCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCc
Q 016974 288 YYQQ------HGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 288 ~~~~------~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~ 329 (379)
+... ....+...|.+++|+|+|++|++|+.||.|++|+..++
T Consensus 294 ~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 294 IEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred eecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 2100 00124457999999999999999999999999997543
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.9e-39 Score=335.15 Aligned_cols=303 Identities=23% Similarity=0.368 Sum_probs=254.6
Q ss_pred eEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECC--CCCEEEEeeCCCcEEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP--TGQSVACGGLDSVCSI 135 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~--~g~~l~~~~~d~~i~i 135 (379)
....++.+|.+.|.+++|+|++++|++|+.|++|++||+.+++....+..|...|.+++|+| ++.++++++.|+.+++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999 5568999999999999
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC----------------
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG---------------- 199 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---------------- 199 (379)
||+.+.. ....+.+|.+.|.+++|+|++ ..|++++.||+|++||+.++.....+..
T Consensus 728 wd~~~~~-------~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 728 WDLNQKE-------CRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp EETTSSS-------EEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred EECCCcc-------hhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 9997532 456678999999999999975 5899999999999999987654332210
Q ss_pred ----------------------------------ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEE
Q 016974 200 ----------------------------------EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRT 245 (379)
Q Consensus 200 ----------------------------------~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~ 245 (379)
....+|...+.+++++| ++.++++++.|+.|++||+... ..+..
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~-~~~~~ 877 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSR-LKVAD 877 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSSCEEEEETTTT-EEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-ceeee
Confidence 01126788899999997 6779999999999999999865 56778
Q ss_pred EecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce-----------------------------eEEEeeccC---
Q 016974 246 FHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ-----------------------------LQVYYQQHG--- 293 (379)
Q Consensus 246 ~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~-----------------------------~~~~~~~~~--- 293 (379)
+.+|...|.+++|+|+|.+|++++.|++|++||+.+... +.......+
T Consensus 878 ~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1249)
T 3sfz_A 878 CRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQID 957 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEE
T ss_pred cCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEE
Confidence 899999999999999999999999999999999753210 000000000
Q ss_pred CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 294 ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 294 ~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
......+.+++|+|+|+++++|+.||.|++||..+++....+ .+|...|.+++|+|+|++|++++.|++|++|++.
T Consensus 958 ~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~----~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG----VGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp EECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEEC----CCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred EcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeec----ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 001235899999999999999999999999999888776655 5799999999999999999999999999999987
Q ss_pred c
Q 016974 374 G 374 (379)
Q Consensus 374 ~ 374 (379)
.
T Consensus 1034 ~ 1034 (1249)
T 3sfz_A 1034 T 1034 (1249)
T ss_dssp T
T ss_pred C
Confidence 5
No 68
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-37 Score=291.23 Aligned_cols=280 Identities=27% Similarity=0.472 Sum_probs=239.1
Q ss_pred eeccccccccE-EEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 60 CRTLQGHAGKV-YSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 60 ~~~l~gH~~~v-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
...+.+|.+.| .++. +++++|++|+.||+|++||+.+++....+..|...|.+++|+ +.++++++.|+.|++||+
T Consensus 111 ~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~ 186 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 186 (445)
T ss_dssp CEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred eEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEEC
Confidence 45788999875 5554 468899999999999999999999999999999999999997 679999999999999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
.+. .....+.+|...|.++.|.+ ..+++|+.|++|++||+.++.....+ .+|...+.++.+ +
T Consensus 187 ~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~-----~~~~~~v~~~~~---~ 248 (445)
T 2ovr_B 187 ETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVL-----MGHVAAVRCVQY---D 248 (445)
T ss_dssp TTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEE-----ECCSSCEEEEEE---C
T ss_pred CcC-------cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEE-----cCCcccEEEEEE---C
Confidence 753 24567789999999999964 46999999999999999988776665 578889999988 4
Q ss_pred CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCC
Q 016974 219 SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIP 298 (379)
Q Consensus 219 ~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 298 (379)
+.++++|+.|+.|++||++.. ..+..+.+|...|.+++| ++.++++++.|+.|++||+++++.+..+.. +..
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~ 320 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-----HQS 320 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGGT-EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-----CCS
T ss_pred CCEEEEEcCCCEEEEEECCCC-cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC-----Ccc
Confidence 568999999999999999865 667788999999999999 889999999999999999999987766532 234
Q ss_pred CeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 299 HVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 299 ~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.+.++.+ +++++++|+.||.|++||..+++....+... ..|..+|++++|+ +++|++|+.||+|++|++..
T Consensus 321 ~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 321 LTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGP-NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp CEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECST-TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred cEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccC-CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCC
Confidence 5676665 5789999999999999999888877766322 3488999999995 58999999999999999875
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7e-40 Score=293.69 Aligned_cols=257 Identities=18% Similarity=0.228 Sum_probs=199.8
Q ss_pred eecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecC-CCceEEEeeCCCeE
Q 016974 105 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPD-EDTHLITSSGDQTC 183 (379)
Q Consensus 105 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i 183 (379)
+..|...|.+++|+|+|++|++++.|++|+|||+... .......+.+|.+.|.+++|+|+ .+..|++|+.|++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~-----~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG-----GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETT-----EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC-----CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 4578889999999999999999999999999998742 12234668899999999999753 35689999999999
Q ss_pred EEeecCCCe--eEEEecCccccCCccCeEEEEEeCCC-CcEEEEecCCCcEEEEEccCCcc--ceEEEecccCCeeEEEE
Q 016974 184 VLWDITTGL--RTSVFGGEFQSGHTADVLSVSISGSN-SRMFVSGSCDSTARLWDTRVASR--AVRTFHGHEGDVNTVKF 258 (379)
Q Consensus 184 ~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~v~~ 258 (379)
++||++++. ....+ .+|...|.+++|+|.. +.+|++|+.|+.|++||++.... ....+.+|...|.+++|
T Consensus 84 ~iWd~~~~~~~~~~~~-----~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 84 IIWREENGTWEKSHEH-----AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp EEECCSSSCCCEEEEE-----CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred EEEECCCCcceEEEEc-----cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence 999998763 33333 5789999999999853 67899999999999999875422 13345689999999999
Q ss_pred ccC-----------------CCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCC----CEEEEEEe
Q 016974 259 FPD-----------------GNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISG----RLLFAGYS 317 (379)
Q Consensus 259 sp~-----------------g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g----~~l~sg~~ 317 (379)
+|+ +.+|++|+.|++|++||++.......... ...+...|.+++|+|++ ++|++|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK--LEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC--CBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee--cccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 997 47899999999999999975532111111 12244579999999987 89999999
Q ss_pred cCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 318 NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 318 dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
||+|++||+...............|...|++++|+|++++||+++.|++|+||+..
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999765210000000113578899999999999999999999999999975
No 70
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=286.63 Aligned_cols=293 Identities=17% Similarity=0.212 Sum_probs=233.3
Q ss_pred eEeeccccccccEEEEEeeCC---CCeEEEEcCCCcEEEEECCC-Ccee-eEeecCCcceEEEEECCCCCEEEEeeCCCc
Q 016974 58 VCCRTLQGHAGKVYSLDWTSE---RNRIVSASQDGRLIVWNALT-SQKT-HAIKLPCAWVMTCAFSPTGQSVACGGLDSV 132 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~---~~~l~s~s~D~~v~iwd~~~-~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 132 (379)
.....+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +... ..+..|...|.+++|+|++++|++++.|+.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 345688999999999999999 59999999999999999987 5554 677889999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEE--ecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQY--VPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVL 210 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
+++||+.... ...+.+|...|.++.| +|+ +.+|++++.|++|++||++++.....+. .+ ..+.
T Consensus 110 v~iwd~~~~~--------~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----~~-~~~~ 174 (368)
T 3mmy_A 110 AKMWDLSSNQ--------AIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQ-----LP-ERCY 174 (368)
T ss_dssp EEEEETTTTE--------EEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEE-----CS-SCEE
T ss_pred EEEEEcCCCC--------ceeeccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEe-----cC-CCce
Confidence 9999987532 2235679999999999 565 3679999999999999999886655542 22 3566
Q ss_pred EEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEe-cccCCeeEEEEccCCCE----EEEeeCCCeEEEEECCCCc--
Q 016974 211 SVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH-GHEGDVNTVKFFPDGNR----FGTGSDDGTCRLFDIRTGH-- 283 (379)
Q Consensus 211 ~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~----l~s~s~D~~i~iwd~~~~~-- 283 (379)
++.+.+ ..+++++.++.+++|+++.......... .+...+.++++.+++.. +++++.|+.|++||++...
T Consensus 175 ~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 175 CADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp EEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred EEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 666664 3677888999999999986544333222 23455677777766655 9999999999999998763
Q ss_pred -eeEEEeeccC-------CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCC
Q 016974 284 -QLQVYYQQHG-------ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADG 355 (379)
Q Consensus 284 -~~~~~~~~~~-------~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~ 355 (379)
.+..+..... ..+...|++++|+|+|++|++|+.||.|++||+.+++.+..+ ..|..+|.+++|+|||
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 252 KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS----EQLDQPISACCFNHNG 327 (368)
T ss_dssp HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC----CCCSSCEEEEEECTTS
T ss_pred ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe----cCCCCCceEEEECCCC
Confidence 3333322110 001125999999999999999999999999999998887776 5789999999999999
Q ss_pred CeEEEeeCCCcEEEEec
Q 016974 356 SALCTGSWDTNLKIWAF 372 (379)
Q Consensus 356 ~~l~s~s~D~~i~vw~~ 372 (379)
++|+++|.|+..+.|++
T Consensus 328 ~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 328 NIFAYASSYDWSKGHEF 344 (368)
T ss_dssp SCEEEEECCCSTTCGGG
T ss_pred CeEEEEecccccccccc
Confidence 99999999987666654
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-39 Score=324.43 Aligned_cols=299 Identities=13% Similarity=0.169 Sum_probs=214.2
Q ss_pred eccccccccEEEEEeeCC-CCeEEEEcCCCcEEEEECCCCceeeEeecC------------------CcceEEEEECCCC
Q 016974 61 RTLQGHAGKVYSLDWTSE-RNRIVSASQDGRLIVWNALTSQKTHAIKLP------------------CAWVMTCAFSPTG 121 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~------------------~~~v~~~~~s~~g 121 (379)
..+.+|.+.|++++|+|+ +..|++|+.||+| +||+.+++....+..+ ...|.+++|+|+|
T Consensus 145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 356789999999999996 4789999999999 9999999888777655 3679999999999
Q ss_pred CEEEEeeCCCcEEEEEcCCCCCCCCCcceeeee---c-------------ccccceEEEEEecC----CCceEEEeeCC-
Q 016974 122 QSVACGGLDSVCSIFNLNSPTDKDGNLPVSRML---S-------------GHKGYVSCCQYVPD----EDTHLITSSGD- 180 (379)
Q Consensus 122 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---~-------------~h~~~v~~~~~~~~----~~~~l~s~~~d- 180 (379)
++|++++.|+.|++||+..... ...+.+ . .|...|.+++|++. +...|++|+.|
T Consensus 224 ~~lasgs~Dg~i~lWd~~~g~~-----~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 224 LHIITIHEDNSLVFWDANSGHM-----IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp SEEEEEETTCCEEEEETTTCCE-----EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred CEEEEEECCCeEEEEECCCCcE-----EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 9999999999999999875321 000111 0 13345666666532 12344454443
Q ss_pred ---------------------------------------------------------------------------CeEEE
Q 016974 181 ---------------------------------------------------------------------------QTCVL 185 (379)
Q Consensus 181 ---------------------------------------------------------------------------~~i~~ 185 (379)
++|++
T Consensus 299 ~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~ 378 (902)
T 2oaj_A 299 RGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIET 378 (902)
T ss_dssp TSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEE
T ss_pred CCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEE
Confidence 44444
Q ss_pred eecCCCeeEEEe-c-CccccCCccCeEEEE----------------------------------EeCCCCcEEEEecCCC
Q 016974 186 WDITTGLRTSVF-G-GEFQSGHTADVLSVS----------------------------------ISGSNSRMFVSGSCDS 229 (379)
Q Consensus 186 wd~~~~~~~~~~-~-~~~~~~h~~~v~~~~----------------------------------~~~~~~~~l~sg~~d~ 229 (379)
||+.++...... . ......|...|.+++ ++| ++++++||+.|+
T Consensus 379 ~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~sp-dg~~laSgs~Dg 457 (902)
T 2oaj_A 379 MLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAE-YGTAFITGHSNG 457 (902)
T ss_dssp EETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCS-EEEEEEEEETTS
T ss_pred EECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccc-cCcEEEEecCCC
Confidence 443332111000 0 000012223444443 344 678999999999
Q ss_pred cEEEEEccCCcc---ceEEE--e-----cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce---------------
Q 016974 230 TARLWDTRVASR---AVRTF--H-----GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ--------------- 284 (379)
Q Consensus 230 ~i~vwd~~~~~~---~~~~~--~-----~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~--------------- 284 (379)
+||+||+..... ..... . +|...|++|+|+|||++||+|+.|++|+|||+.+++.
T Consensus 458 tVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~ 537 (902)
T 2oaj_A 458 SVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMN 537 (902)
T ss_dssp EEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------
T ss_pred cEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCccccee
Confidence 999999875421 11111 1 7889999999999999999999999999999976631
Q ss_pred ------------------------------eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEE-
Q 016974 285 ------------------------------LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVL- 333 (379)
Q Consensus 285 ------------------------------~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~- 333 (379)
+..+ ..+...|++++|||+| +||+|+.|++|++||+.+...+.
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l-----~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~ 611 (902)
T 2oaj_A 538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV-----HANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYM 611 (902)
T ss_dssp CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE-----CCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred eeeccccCCccccccccccCCCCCCCccceeEEE-----EcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEE
Confidence 1111 1245679999999999 99999999999999988776653
Q ss_pred -ecccccCCccCceeEEEEC-----CCC---CeEEEeeCCCcEEEEec
Q 016974 334 -NLGSLQNSHEGRITCLGLS-----ADG---SALCTGSWDTNLKIWAF 372 (379)
Q Consensus 334 -~~~~~~~~h~~~v~~~~~s-----~d~---~~l~s~s~D~~i~vw~~ 372 (379)
.+..+..+|.+.|++++|+ ||| ++|++|+.|++|++|++
T Consensus 612 ~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 612 ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 2322212799999999999 886 89999999999999998
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.3e-37 Score=291.74 Aligned_cols=291 Identities=20% Similarity=0.262 Sum_probs=241.4
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEEC--CCCCEEEEeeCCCcEE
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFS--PTGQSVACGGLDSVCS 134 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~d~~i~ 134 (379)
.....++.+|.+.|++++|++++ .|++|+.||+|++||+.+++....+..|...|.+++|+ +++.++++++.|+.++
T Consensus 152 ~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 152 KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 34567888999999999999987 99999999999999999999999999999999999998 6789999999999999
Q ss_pred EEEcCCCCCCCC----------------CcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEec
Q 016974 135 IFNLNSPTDKDG----------------NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG 198 (379)
Q Consensus 135 iw~~~~~~~~~~----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 198 (379)
+||+........ .......+.+|...|.++. ++ +..+++|+.|++|++||+.++.....+
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~- 306 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GH-GNIVVSGSYDNTLIVWDVAQMKCLYIL- 306 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EE-TTEEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CC-CCEEEEEeCCCeEEEEECCCCcEEEEe-
Confidence 999986432110 0012456778999888774 43 358999999999999999998877666
Q ss_pred CccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEE
Q 016974 199 GEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFD 278 (379)
Q Consensus 199 ~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd 278 (379)
.+|...+.++.+++ +++++++|+.|+.|++||++.. +.+..+.+|...|.+++|+ +.+|++++.|++|++||
T Consensus 307 ----~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 307 ----SGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENG-ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp ----CCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred ----cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCC-cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEE
Confidence 57889999999997 6778999999999999999865 6788899999999999997 57999999999999999
Q ss_pred CCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeE
Q 016974 279 IRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSAL 358 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l 358 (379)
++++........ ...+..++|+|++++|++|+ ||.|++||+.+++.+.... ..|.+.|.+++|+ +...+
T Consensus 379 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~---~~~~~~v~~v~~~-~~~l~ 447 (464)
T 3v7d_B 379 ANDYSRKFSYHH------TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANI---LKDADQIWSVNFK-GKTLV 447 (464)
T ss_dssp TTTCCEEEEEEC------TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCT---TTTCSEEEEEEEE-TTEEE
T ss_pred CCCCceeeeecC------CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhh---ccCCCcEEEEEec-CCEEE
Confidence 998776544321 22467789999999999998 8999999999988776421 5688999999997 45566
Q ss_pred EEeeCCCcEEEEe
Q 016974 359 CTGSWDTNLKIWA 371 (379)
Q Consensus 359 ~s~s~D~~i~vw~ 371 (379)
++++.|+.+.+|-
T Consensus 448 ~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 448 AAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEeCCeEEEEE
Confidence 6677787766554
No 73
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-39 Score=297.81 Aligned_cols=270 Identities=19% Similarity=0.321 Sum_probs=218.2
Q ss_pred EEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC
Q 016974 91 LIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE 170 (379)
Q Consensus 91 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 170 (379)
+..|+..+.....++.+|...|.+++|+|++++|++|+.|++|+|||+.... ....+.+|...|.+++|+|++
T Consensus 48 ~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-------~~~~~~~h~~~v~~~~~s~~g 120 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-------KTHAIKLHCPWVMECAFAPNG 120 (380)
T ss_dssp CCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-------EEEEEECCCTTCCCCEECTTS
T ss_pred ccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------cceEEecCCCCEEEEEECCCC
Confidence 3445656666778889999999999999999999999999999999986432 456678899999999999985
Q ss_pred CceEEEeeCCCeEEEeecCCCeeEE--EecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEE--
Q 016974 171 DTHLITSSGDQTCVLWDITTGLRTS--VFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF-- 246 (379)
Q Consensus 171 ~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~-- 246 (379)
.+|++|+.|+++++||+.+..... ........+|...+.++.+.|.+...|++|+.|+.|++||++.. ..+..+
T Consensus 121 -~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~-~~~~~~~~ 198 (380)
T 3iz6_a 121 -QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG-QRISIFGS 198 (380)
T ss_dssp -SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC-CEEEEECC
T ss_pred -CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC-cEEEEeec
Confidence 689999999999999986532100 00011236899999999999877778999999999999999865 445555
Q ss_pred ---ecccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECCCC-ceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcE
Q 016974 247 ---HGHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIRTG-HQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDC 321 (379)
Q Consensus 247 ---~~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i 321 (379)
.+|...|.+++|+| ++++|++|+.|++|++||++.. ..+..+.. +...|.+++|+|+|++|++|+.||+|
T Consensus 199 ~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~l~s~s~D~~i 273 (380)
T 3iz6_a 199 EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG-----HEGDINSVKFFPDGQRFGTGSDDGTC 273 (380)
T ss_dssp CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC-----CSSCCCEEEECTTSSEEEEECSSSCE
T ss_pred ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC-----cCCCeEEEEEecCCCeEEEEcCCCeE
Confidence 67999999999987 8999999999999999999843 44444422 34569999999999999999999999
Q ss_pred EEEeCCCceEEEeccccc---CCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 322 YVWDTLLAKVVLNLGSLQ---NSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 322 ~iwd~~~~~~~~~~~~~~---~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++||+.+++....+.... ..+...|++++|+|+|++|++|+.||+|++|+...
T Consensus 274 ~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 274 RLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp EEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT
T ss_pred EEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC
Confidence 999999888776553211 12334589999999999999999999999999754
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-38 Score=290.57 Aligned_cols=261 Identities=18% Similarity=0.233 Sum_probs=216.5
Q ss_pred eeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECC--CCceeeEeecCCcceEEEEECCC--CCEEEEeeCCCcEEE
Q 016974 60 CRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNAL--TSQKTHAIKLPCAWVMTCAFSPT--GQSVACGGLDSVCSI 135 (379)
Q Consensus 60 ~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~d~~i~i 135 (379)
..++.+|.+.|++++|+|++++|++|+.||+|++||+. +++....+..|...|.+++|+|+ +++|++++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 45789999999999999999999999999999999997 55667778889999999999987 999999999999999
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI 214 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
||+... .......+.+|...|.+++|+|+. +..|++++.|+.|++||+.++...... ....|...+.++.+
T Consensus 84 wd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 84 WKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI---IIDAHAIGVNSASW 155 (379)
T ss_dssp EEEETT-----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE---EEECCTTCEEEEEE
T ss_pred EEcCCC-----ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE---EecCCCCceEEEEE
Confidence 999753 223455677899999999999973 468999999999999999876322111 11478889999999
Q ss_pred eCC------------CCcEEEEecCCCcEEEEEccCCcc---ceEEEecccCCeeEEEEccC---CCEEEEeeCCCeEEE
Q 016974 215 SGS------------NSRMFVSGSCDSTARLWDTRVASR---AVRTFHGHEGDVNTVKFFPD---GNRFGTGSDDGTCRL 276 (379)
Q Consensus 215 ~~~------------~~~~l~sg~~d~~i~vwd~~~~~~---~~~~~~~h~~~v~~v~~sp~---g~~l~s~s~D~~i~i 276 (379)
+|. ++.++++|+.|+.|++||++.... ....+.+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 985 578999999999999999976532 34577889999999999999 899999999999999
Q ss_pred EECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCC
Q 016974 277 FDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLL 328 (379)
Q Consensus 277 wd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~ 328 (379)
||++++.............+...|.+++|+|+|++|++++.||.|++||+..
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 9998864221111112223455799999999999999999999999999763
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.7e-38 Score=306.14 Aligned_cols=290 Identities=16% Similarity=0.262 Sum_probs=240.9
Q ss_pred eEeecccccccc-EEEEEeeC--CCCeEEEEcCCCcEEEEECCCC--------ceeeEeecCCcceEEEEECCCCCEEEE
Q 016974 58 VCCRTLQGHAGK-VYSLDWTS--ERNRIVSASQDGRLIVWNALTS--------QKTHAIKLPCAWVMTCAFSPTGQSVAC 126 (379)
Q Consensus 58 ~~~~~l~gH~~~-v~~~~~~~--~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~g~~l~~ 126 (379)
.....+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ +....+..+...+.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 345678999999 99999999 9999999999999999999754 566777888899999999999999999
Q ss_pred eeCC----CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccc
Q 016974 127 GGLD----SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQ 202 (379)
Q Consensus 127 ~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 202 (379)
++.+ +.+.+||... ....+.+|...|.++.|+|++...+++++.|+.|++||+.++.....+
T Consensus 134 ~~~~~~~~~~v~~~d~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~----- 199 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSGN---------SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD----- 199 (615)
T ss_dssp EECCSSCSEEEEETTTCC---------EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-----
T ss_pred eccCCCCccEEEEEECCC---------cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-----
Confidence 9988 6788887321 445678999999999999987668999999999999999988777665
Q ss_pred cCCcc---CeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEE-e---cccCCeeEEEEccCCCEEEEeeCCCeEE
Q 016974 203 SGHTA---DVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF-H---GHEGDVNTVKFFPDGNRFGTGSDDGTCR 275 (379)
Q Consensus 203 ~~h~~---~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~-~---~h~~~v~~v~~sp~g~~l~s~s~D~~i~ 275 (379)
.+|.. .|.+++|+|.+++++++++.|+.|++||++.. +.+..+ . +|...|.+++|+ ++.+|++++.|+.|+
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~ 277 (615)
T 1pgu_A 200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG-EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR 277 (615)
T ss_dssp CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC-CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence 56777 89999999853789999999999999999865 556666 5 899999999999 999999999999999
Q ss_pred EEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCC
Q 016974 276 LFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADG 355 (379)
Q Consensus 276 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~ 355 (379)
+||+++++.+..+.... ......+.++.|+ +++++++|+.||.|++||..+++....+ .+|...|.+++| |+
T Consensus 278 ~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~----~~~~~~v~~~~~-~~- 349 (615)
T 1pgu_A 278 VWDVTTSKCVQKWTLDK-QQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI----SGHNKGITALTV-NP- 349 (615)
T ss_dssp EEETTTTEEEEEEECCT-TCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE----CCCSSCEEEEET-TT-
T ss_pred EEECCCCcEEEEEcCCC-CcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE----eCCCCCEEEEEe-cC-
Confidence 99999988776664321 2223457888885 8999999999999999999887766665 467777777777 66
Q ss_pred CeEEEeeCCCcEEEEecC
Q 016974 356 SALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 356 ~~l~s~s~D~~i~vw~~~ 373 (379)
|++++.||.|++|++.
T Consensus 350 --l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 350 --LISGSYDGRIMEWSSS 365 (615)
T ss_dssp --TEEEETTSCEEETTTT
T ss_pred --cEEECCCCeEEEEEch
Confidence 5666666666666643
No 76
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-37 Score=275.43 Aligned_cols=252 Identities=25% Similarity=0.450 Sum_probs=214.9
Q ss_pred ceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC
Q 016974 100 QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG 179 (379)
Q Consensus 100 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 179 (379)
.....+..|...|.+++|+|+|++|++++.|+.+++|++.... ....+.+|...|.+++|+|++ .+|++++.
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-------~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~ 85 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-------FEKTISGHKLGISDVAWSSDS-NLLVSASD 85 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTS-SEEEEEET
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-------cchhhccCCCceEEEEEcCCC-CEEEEECC
Confidence 3445677888999999999999999999999999999986432 445678999999999999975 68999999
Q ss_pred CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEc
Q 016974 180 DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFF 259 (379)
Q Consensus 180 d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~s 259 (379)
|+.|++||+.++.....+ .+|...|.++.++| +++++++|+.|+.|++||++.. +.+..+.+|..+|.+++|+
T Consensus 86 d~~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTL-----KGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTG-KCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp TSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEEECCCCcEEEEE-----cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCC-EEEEEecCCCCcEEEEEEc
Confidence 999999999998776665 57889999999997 6779999999999999999865 5677888999999999999
Q ss_pred cCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccccc
Q 016974 260 PDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQ 339 (379)
Q Consensus 260 p~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 339 (379)
|++.+|++++.|+.|++||+++++.+..+... +...+..++|+|++++|++|+.||.|++||+.+++....+
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---- 230 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD----DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY---- 230 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCS----SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE----
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEecc----CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE----
Confidence 99999999999999999999998876655322 2346899999999999999999999999999988877666
Q ss_pred CCccCce---eEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 340 NSHEGRI---TCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 340 ~~h~~~v---~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.+|...+ ......+++.+|++|+.||+|++|++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 231 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp CSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred EecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 3454433 3333447889999999999999999876
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-38 Score=319.66 Aligned_cols=213 Identities=12% Similarity=0.133 Sum_probs=176.9
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 141 (379)
...||.+.|++++|+|++++||+|+.||+|+|||..+.+....+. +...|.+++|+| |++|++++.|++|++||+...
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 345899999999999999999999999999999988766555443 567899999999 889999999999999999753
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEec-C-----ccccCCccCeEEEEEe
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG-G-----EFQSGHTADVLSVSIS 215 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~-----~~~~~h~~~v~~~~~~ 215 (379)
. ....+. |.+.|++++|+|++ .+|++|+.||+|++||+.++....... . ....+|...|.+++|+
T Consensus 90 ~-------~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 90 K-------VLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp S-------EEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred c-------EEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 2 233343 66889999999975 689999999999999998876431110 0 1125788999999999
Q ss_pred CCCCcEEEEecCCCcEEEEEccCCccceEEEecc------------------cCCeeEEEEccCCCEEEEeeCCCeEEEE
Q 016974 216 GSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGH------------------EGDVNTVKFFPDGNRFGTGSDDGTCRLF 277 (379)
Q Consensus 216 ~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h------------------~~~v~~v~~sp~g~~l~s~s~D~~i~iw 277 (379)
|.+..++++|+.|+.| +||++.. +.+..+.+| ...|++++|+|+|++|++|+.|++|++|
T Consensus 161 p~~~~~l~~g~~dg~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp TTEEEEEEEECSSCEE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cCCCCEEEEEeCCCcE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 8767789999999999 9999865 556666655 4779999999999999999999999999
Q ss_pred ECCCCceeEE
Q 016974 278 DIRTGHQLQV 287 (379)
Q Consensus 278 d~~~~~~~~~ 287 (379)
|+++++.+..
T Consensus 239 d~~~g~~~~~ 248 (902)
T 2oaj_A 239 DANSGHMIMA 248 (902)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCcEEEE
Confidence 9998877643
No 78
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-37 Score=287.32 Aligned_cols=245 Identities=20% Similarity=0.329 Sum_probs=206.6
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
.|.+++|+|++++|++|+.|++|++||+.+++....+..|...|.+++|+|++++|++++.|+++++||+....
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~------ 198 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ------ 198 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE------
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe------
Confidence 49999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred ceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCc--cccCCccCeEEEEEeCCCCcEEEEec
Q 016974 149 PVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE--FQSGHTADVLSVSISGSNSRMFVSGS 226 (379)
Q Consensus 149 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~sg~ 226 (379)
....+ .+...+.+++|+|.++.+|++|+.|++|++||+.++.....+... ...+|...|.+++|++ +++++++|+
T Consensus 199 -~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s 275 (393)
T 1erj_A 199 -CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGS 275 (393)
T ss_dssp -EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEE
T ss_pred -eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEe
Confidence 22223 355678999999966678999999999999999988665544221 1247889999999997 678999999
Q ss_pred CCCcEEEEEccCCc-----------cceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCC
Q 016974 227 CDSTARLWDTRVAS-----------RAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 227 ~d~~i~vwd~~~~~-----------~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
.|+.|++||++... .....+.+|...|.+++|+|++.+|++|+.|++|++||+++++.+..+..
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~----- 350 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG----- 350 (393)
T ss_dssp TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-----
T ss_pred CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-----
Confidence 99999999987431 23456789999999999999999999999999999999999988766532
Q ss_pred CCCCeEEEEEcc------CCCEEEEEEecCcEEEEeCC
Q 016974 296 EIPHVTSIAFSI------SGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 296 ~~~~v~~~~fs~------~g~~l~sg~~dg~i~iwd~~ 327 (379)
+...|.+++|++ ++++|++|+.||+|++|+..
T Consensus 351 h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 351 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 234699999886 68899999999999999964
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.9e-36 Score=304.58 Aligned_cols=299 Identities=21% Similarity=0.292 Sum_probs=245.1
Q ss_pred eEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFN 137 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~ 137 (379)
....++.+|.++|.+++|+|++++|++|+.||+|++||+.+++....+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 45567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
+... ......+.+|...|.+++|+|.++..|++++.|++|++||+.++.....+. ..+...+..++++|.
T Consensus 126 ~~~~------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~ 195 (814)
T 3mkq_A 126 WENN------WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT----TGQERGVNYVDYYPL 195 (814)
T ss_dssp GGGT------SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE----CCCTTCCCEEEECCS
T ss_pred CCCC------ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe----cCCCCCEEEEEEEEC
Confidence 8753 124556788999999999999555789999999999999998765544432 344578889999872
Q ss_pred -CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCC
Q 016974 218 -NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENE 296 (379)
Q Consensus 218 -~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 296 (379)
++.++++|+.||.|++||++.. ..+..+.+|...|.+++|+|++.+|++++.||.|++||+.+++.+..+.. +
T Consensus 196 ~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-----~ 269 (814)
T 3mkq_A 196 PDKPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-----G 269 (814)
T ss_dssp TTCCEEEEECTTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC-----S
T ss_pred CCCCEEEEEeCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec-----C
Confidence 5679999999999999999865 56778889999999999999999999999999999999999887766533 2
Q ss_pred CCCeEEEEEccCCC--EEEEEEecCcEEEEeCCCc----------eEEEecc----------------------------
Q 016974 297 IPHVTSIAFSISGR--LLFAGYSNGDCYVWDTLLA----------KVVLNLG---------------------------- 336 (379)
Q Consensus 297 ~~~v~~~~fs~~g~--~l~sg~~dg~i~iwd~~~~----------~~~~~~~---------------------------- 336 (379)
...+.+++|+|+|+ ++++| .++.+.+|+.... +.+....
T Consensus 270 ~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (814)
T 3mkq_A 270 LERSWCIATHPTGRKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQ 348 (814)
T ss_dssp SSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCC
T ss_pred CCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceee
Confidence 34699999999997 45544 5667888885432 1111100
Q ss_pred -cccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 337 -SLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 337 -~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.....|...+.+++|+|+|++|++++ |+.+.+|++..
T Consensus 349 ~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 349 TKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp CEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred eecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcc
Confidence 00023455688999999999999888 89999998654
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.3e-37 Score=285.48 Aligned_cols=292 Identities=16% Similarity=0.199 Sum_probs=231.5
Q ss_pred EEEEEeeCCCCe-EEEEcCCCcEEEEECCCCc----eeeEeecCCcceEEEEECC-CCCEEEEeeCCCcEEEEEcCCCCC
Q 016974 70 VYSLDWTSERNR-IVSASQDGRLIVWNALTSQ----KTHAIKLPCAWVMTCAFSP-TGQSVACGGLDSVCSIFNLNSPTD 143 (379)
Q Consensus 70 v~~~~~~~~~~~-l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~ 143 (379)
...++++|+... +++++.||.|+||++.... ....+..|...|.+++|+| ++++|++++.|+.|++|++.....
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 445788887654 4468999999999986542 3445677889999999999 999999999999999999986432
Q ss_pred CCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEE
Q 016974 144 KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFV 223 (379)
Q Consensus 144 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 223 (379)
..........+.+|...|.+++|+|++..+|++++.|++|++||+.++.....+.. ..|...|.+++|++ ++++|+
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~-~~~~l~ 192 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP---DVHPDTIYSVDWSR-DGALIC 192 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT---TTCCSCEEEEEECT-TSSCEE
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec---CCCCCceEEEEECC-CCCEEE
Confidence 11111234567899999999999998767899999999999999999876655420 36888999999997 678899
Q ss_pred EecCCCcEEEEEccCCccceEEE-ecccCC-eeEEEEccCCCEEEEe---eCCCeEEEEECCCCce-eEEEeeccCCCCC
Q 016974 224 SGSCDSTARLWDTRVASRAVRTF-HGHEGD-VNTVKFFPDGNRFGTG---SDDGTCRLFDIRTGHQ-LQVYYQQHGENEI 297 (379)
Q Consensus 224 sg~~d~~i~vwd~~~~~~~~~~~-~~h~~~-v~~v~~sp~g~~l~s~---s~D~~i~iwd~~~~~~-~~~~~~~~~~~~~ 297 (379)
+++.|+.|++||++.. ..+..+ .+|.+. +.++.|+|++.+|++| +.|+.|++||+++++. +...... +.
T Consensus 193 ~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~ 267 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKG-TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD----TS 267 (402)
T ss_dssp EEETTSEEEEEETTTT-EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC----CC
T ss_pred EEecCCcEEEEeCCCC-ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc----CC
Confidence 9999999999999865 456666 688776 8999999999999999 7999999999988664 2222211 22
Q ss_pred CCeEEEEEccCCCEEEE-EEecCcEEEEeCCCceE-EEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 298 PHVTSIAFSISGRLLFA-GYSNGDCYVWDTLLAKV-VLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 298 ~~v~~~~fs~~g~~l~s-g~~dg~i~iwd~~~~~~-~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..+.+++|+|+|++|++ |+.||.|++||+.+++. ...+... .|..+|.+++|+|++.++++ .|+.+++|++..
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~--~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF--SSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE--CCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc--ccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 45899999999999975 55799999999887662 3333222 26689999999999998874 577999999865
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-36 Score=276.60 Aligned_cols=261 Identities=18% Similarity=0.259 Sum_probs=211.9
Q ss_pred ceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEee
Q 016974 100 QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSS 178 (379)
Q Consensus 100 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~ 178 (379)
+....+..|...|.+++|+|++++|++++.|+.|++|++... .......+.+|.+.|.+++|+|+. +.+|++++
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-----cceeeeEecCCCCcEEEEEeCCCCCCCEEEEec
Confidence 445677889999999999999999999999999999998632 223456788999999999998652 46899999
Q ss_pred CCCeEEEeecCCCe--eEEEecCccccCCccCeEEEEEeCCC-CcEEEEecCCCcEEEEEccCCc-cceEEEecccCCee
Q 016974 179 GDQTCVLWDITTGL--RTSVFGGEFQSGHTADVLSVSISGSN-SRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVN 254 (379)
Q Consensus 179 ~d~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~~h~~~v~ 254 (379)
.|+.|++||+.++. ....+ ..|...+.++++++.. +.++++++.|+.|++||++... .....+.+|...|.
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred cCCEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceE
Confidence 99999999999875 33333 5688999999999743 7799999999999999998653 23456778999999
Q ss_pred EEEEcc-------------CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccC---CCEEEEEEec
Q 016974 255 TVKFFP-------------DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSIS---GRLLFAGYSN 318 (379)
Q Consensus 255 ~v~~sp-------------~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~---g~~l~sg~~d 318 (379)
+++|+| ++.+|++++.|+.|++||++++......... ...+...|.+++|+|+ +++|++++.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE-EecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 999999 6999999999999999999876543222111 1123457999999999 8999999999
Q ss_pred CcEEEEeCCCce---EEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 319 GDCYVWDTLLAK---VVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 319 g~i~iwd~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
|.|++||+..+. ..... ....|...|++++|+|+|++|++++.||.|++|++.
T Consensus 231 g~i~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPWKKTLL--KEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCEEEEEESSTTSCCEEEES--SSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CEEEEEeCCCCCccceeeee--ccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 999999987752 11111 114588899999999999999999999999999986
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-38 Score=312.13 Aligned_cols=259 Identities=18% Similarity=0.225 Sum_probs=211.9
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECC--CCceeeEeecCCcceEEEEECCC--CCEEEEeeCCCcEEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNAL--TSQKTHAIKLPCAWVMTCAFSPT--GQSVACGGLDSVCSIF 136 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~d~~i~iw 136 (379)
.++.||.+.|++++|+|++++|++|+.||+|++||+. +++....+..|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4689999999999999999999999999999999987 45667788889999999999988 9999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
|+... .......+.+|...|.++.|+|+. +..+++|+.||+|++||+.++...... ...+|...|.++.++
T Consensus 83 d~~~~-----~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~---~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 83 KEENG-----RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI---IIDAHAIGVNSASWA 154 (753)
T ss_dssp EEETT-----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE---EEECCSSCEEEEEEC
T ss_pred ECCCC-----cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee---EeecCCCceEEEEec
Confidence 98752 223456678899999999999973 468999999999999999876321111 115788899999999
Q ss_pred CC------------CCcEEEEecCCCcEEEEEccCCc---cceEEEecccCCeeEEEEccC---CCEEEEeeCCCeEEEE
Q 016974 216 GS------------NSRMFVSGSCDSTARLWDTRVAS---RAVRTFHGHEGDVNTVKFFPD---GNRFGTGSDDGTCRLF 277 (379)
Q Consensus 216 ~~------------~~~~l~sg~~d~~i~vwd~~~~~---~~~~~~~~h~~~v~~v~~sp~---g~~l~s~s~D~~i~iw 277 (379)
|. ++.++++|+.||.|++||++... .....+.+|...|++++|+|+ +.+|++++.||+|++|
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 85 57789999999999999998653 345677899999999999999 8999999999999999
Q ss_pred ECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 278 DIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 278 d~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
|++++.............+...|++++|+|+|++|++|+.||.|++||..
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 99886422111111122344578999999999999999999999999976
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-36 Score=299.87 Aligned_cols=256 Identities=22% Similarity=0.394 Sum_probs=212.0
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
+.+.+.+|.+.|.+++|+|++++|+||+.|++|+|||+.+++....+..|...|.+++|+|++++|++++.|++|++||+
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCC-ceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDED-THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
.... .........+|...|.+++|+|++. ..|++++.|++|++||+.++.....+ .+|...|.+++++|
T Consensus 502 ~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~-----~~h~~~v~~v~~sp- 571 (694)
T 3dm0_A 502 LGEC----KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL-----AGHTGYVSTVAVSP- 571 (694)
T ss_dssp TSCE----EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECT-
T ss_pred CCCc----ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE-----cCCCCCEEEEEEeC-
Confidence 5321 1111122357999999999999753 47999999999999999988766655 57999999999997
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC----
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG---- 293 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~---- 293 (379)
+++++++|+.|+.|++||++.. +.+..+. +...|.+++|+|++.++++++ |+.|++||++++..+..+.....
T Consensus 572 dg~~l~sg~~Dg~i~iwd~~~~-~~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~ 648 (694)
T 3dm0_A 572 DGSLCASGGKDGVVLLWDLAEG-KKLYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAE 648 (694)
T ss_dssp TSSEEEEEETTSBCEEEETTTT-EEEECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----
T ss_pred CCCEEEEEeCCCeEEEEECCCC-ceEEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccc
Confidence 6789999999999999999865 4454444 456899999999998777765 56699999999877665432110
Q ss_pred ----------CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 294 ----------ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 294 ----------~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
......+++++|+|+|++|++|+.||.|++||+.
T Consensus 649 ~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 649 KADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 0112247899999999999999999999999964
No 84
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.3e-36 Score=271.91 Aligned_cols=285 Identities=11% Similarity=0.070 Sum_probs=208.5
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEE-EEeeCCCcEEEEEcC
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLN 139 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~ 139 (379)
.++.+|.+.|++++|+|||++|++|+.|+ ++|||..+++.......+ .+..+++.++++.+ ++++.|+++++||+.
T Consensus 13 ~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp ------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred cccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 35688999999999999999999998775 789999877665554433 46778889988877 567888999999987
Q ss_pred CCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCC-eeEEEecCccccCCccCeEEEEEeCCC
Q 016974 140 SPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG-LRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
... ....+. |...|.++.++++ .++.+ .|+.|++||+.++ .....+. . ....+++++
T Consensus 90 ~~~-------~~~~~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~-----~---~~~~~~~s~-- 147 (355)
T 3vu4_A 90 KKQ-------DVSRIK-VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDI-----R---FGGVCEFSN-- 147 (355)
T ss_dssp TTE-------EEEEEE-CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCE-----E---EEEEEEEET--
T ss_pred CCc-------EEEEEE-CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEec-----c---CCceEEEEc--
Confidence 532 223333 5678999999874 23333 5889999999876 3332221 1 223344454
Q ss_pred CcEEEE--ecCCCcEEEEEccCCc--------------cc-eEEEecccCCeeEEEEccCCCEEEEeeCCCe-EEEEECC
Q 016974 219 SRMFVS--GSCDSTARLWDTRVAS--------------RA-VRTFHGHEGDVNTVKFFPDGNRFGTGSDDGT-CRLFDIR 280 (379)
Q Consensus 219 ~~~l~s--g~~d~~i~vwd~~~~~--------------~~-~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~-i~iwd~~ 280 (379)
.+++. |+.||.|++||++... .+ +..+.+|.+.|++++|+|+|++|++|+.|++ |++||++
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 34444 7899999999998543 12 6788999999999999999999999999998 9999999
Q ss_pred CCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEE--Eeccc-----------------ccCC
Q 016974 281 TGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVV--LNLGS-----------------LQNS 341 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~--~~~~~-----------------~~~~ 341 (379)
+++.+..+... .+...|.+++|+|+|++|++|+.|++|++||+...... ..+.. +...
T Consensus 227 ~~~~~~~~~~g---~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 227 DGVLVREFRRG---LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp TCCEEEEEECT---TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred CCcEEEEEEcC---CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 99888776522 02357999999999999999999999999998654210 11100 0111
Q ss_pred ccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 342 HEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 342 h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+..+...++|++||+.|++++.||.+++|++..
T Consensus 304 ~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 304 KHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp TTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred CCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 223347789999999999999999999998754
No 85
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-37 Score=286.19 Aligned_cols=264 Identities=9% Similarity=0.063 Sum_probs=209.3
Q ss_pred cccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCC
Q 016974 67 AGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
...|.+|+|+|||+++||+|.|++|+ |...++ .+++|...|.+++|+|+| .++.+.+|+.+...
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~---- 78 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG---- 78 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC----
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC-------CcceEEEEeCCCce----
Confidence 35799999999999999999999999 755554 446888999999999999 56666666543111
Q ss_pred CcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCcc-----CeEEEEEeCCCCcE
Q 016974 147 NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA-----DVLSVSISGSNSRM 221 (379)
Q Consensus 147 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~ 221 (379)
... .+|...|.+++|+|++ ..|++++.||+|++||... .+..+ . |.. .+.+++|+| ++++
T Consensus 79 ----~~~-~~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l-----~-~~~~~~~~sv~svafSP-DG~~ 143 (588)
T 2j04_A 79 ----LLN-SQPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNL-----D-SKGNLSSRTYHCFEWNP-IESS 143 (588)
T ss_dssp ----SST-TSCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEEC-----C-CSSCSTTTCEEEEEECS-SSSC
T ss_pred ----Eee-cCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeec-----c-CCCccccccEEEEEEcC-CCCE
Confidence 111 1567889999999985 6799999999999999644 33333 2 333 599999998 7889
Q ss_pred EEEecCCCcEEEEEccCCcc------ceEEE----ecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee---EEE
Q 016974 222 FVSGSCDSTARLWDTRVASR------AVRTF----HGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL---QVY 288 (379)
Q Consensus 222 l~sg~~d~~i~vwd~~~~~~------~~~~~----~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~---~~~ 288 (379)
|++|+.||+|++||+..... .+..+ .+|..+|.+++|+||| +++++.|++|++||+.++... ..+
T Consensus 144 LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 144 IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeee
Confidence 99999999999999986531 25666 6778899999999999 888999999999999876632 222
Q ss_pred eeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEE--CCCCCeEEEeeCCCc
Q 016974 289 YQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGL--SADGSALCTGSWDTN 366 (379)
Q Consensus 289 ~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~--s~d~~~l~s~s~D~~ 366 (379)
... +...|.+++|+ |++||+++ +++|++||...++..... .+|.+.|+.++| +||++.|++++.||+
T Consensus 222 ~~~----h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~----~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 222 QNA----SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLK----TGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp ECC----CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEE----CSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred ccc----ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEE----cCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 211 23468999999 68999887 699999998877763322 369999999999 999999999999999
Q ss_pred EEEEecCce
Q 016974 367 LKIWAFGGY 375 (379)
Q Consensus 367 i~vw~~~~~ 375 (379)
++|.++.+
T Consensus 291 -klw~~d~~ 298 (588)
T 2j04_A 291 -KVLLEDEL 298 (588)
T ss_dssp -EEEESSSE
T ss_pred -EEEeeccE
Confidence 99998754
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=277.80 Aligned_cols=291 Identities=11% Similarity=0.085 Sum_probs=223.8
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc---eeeEeecC------------------------------------
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ---KTHAIKLP------------------------------------ 108 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~------------------------------------ 108 (379)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468899999999966554 68899999999988 55444422
Q ss_pred ------------------CcceEEEEECCCCCEE-EEeeCCCcEEEEEcCCCCCCCCCcceeeeec--ccccceEEEEEe
Q 016974 109 ------------------CAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPTDKDGNLPVSRMLS--GHKGYVSCCQYV 167 (379)
Q Consensus 109 ------------------~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~ 167 (379)
...|.+++|+|+|++| ++++.|+.|++|++.... +. ....+. .|...|.+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~---~~--~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS---KN--VLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS---SS--CEEEEEEEECSSCEEEEEEC
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC---Cc--eeeeeecccCCCCceEEEEc
Confidence 2269999999999996 899999999999997211 11 223333 567889999999
Q ss_pred cCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC--CCcEEEEecCCCcEEEEEccCCccceEE
Q 016974 168 PDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS--NSRMFVSGSCDSTARLWDTRVASRAVRT 245 (379)
Q Consensus 168 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~sg~~d~~i~vwd~~~~~~~~~~ 245 (379)
|++ .+|++|+.|+.|.+|++.++..... ......+|...|.+++|+|. .+++|++|+.|+.|++||++.. ..+..
T Consensus 159 p~~-~~l~~~~~~g~v~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-~~~~~ 235 (450)
T 2vdu_B 159 EDD-TTVIIADKFGDVYSIDINSIPEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-FIVDK 235 (450)
T ss_dssp TTS-SEEEEEETTSEEEEEETTSCCCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-TCEEE
T ss_pred CCC-CEEEEEeCCCcEEEEecCCcccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-ceeee
Confidence 975 6899999999999999987653320 00112568899999999984 1789999999999999999865 34444
Q ss_pred -EecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeecc--------------------CCCCCCCeEEEE
Q 016974 246 -FHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH--------------------GENEIPHVTSIA 304 (379)
Q Consensus 246 -~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~--------------------~~~~~~~v~~~~ 304 (379)
+.+|...|.+++|+ ++++|++++.|++|++||+++++.+..+.... .......|.+++
T Consensus 236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 56899999999999 99999999999999999999998877664211 001224589999
Q ss_pred EccCCCEEEEEE-ecCcEEEEeC--CCc---eEEEecccccCCccCceeEEEECCCCCeEEEeeC------CCcEEEEec
Q 016974 305 FSISGRLLFAGY-SNGDCYVWDT--LLA---KVVLNLGSLQNSHEGRITCLGLSADGSALCTGSW------DTNLKIWAF 372 (379)
Q Consensus 305 fs~~g~~l~sg~-~dg~i~iwd~--~~~---~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~------D~~i~vw~~ 372 (379)
|+|++++|++++ .|+.|++||+ ... +....+ ..| +.|.+++|+|++.++++++. +..|++|.+
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~----~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQII----TFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEE----ECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEe----ccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 999999999999 8999999998 444 444444 345 78999999996555555553 556899986
Q ss_pred C
Q 016974 373 G 373 (379)
Q Consensus 373 ~ 373 (379)
.
T Consensus 390 ~ 390 (450)
T 2vdu_B 390 N 390 (450)
T ss_dssp E
T ss_pred E
Confidence 5
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-36 Score=275.32 Aligned_cols=251 Identities=17% Similarity=0.257 Sum_probs=206.5
Q ss_pred ccccEEEEEeeCC----CCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECC-CCCEEEEeeCCCcEEEEEcCC
Q 016974 66 HAGKVYSLDWTSE----RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP-TGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 66 H~~~v~~~~~~~~----~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~ 140 (379)
|...|++++|+|+ +++|++|+.||+|++||+.+++....+..|...|.+++|+| ++.+|++++.|+.|++||+..
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6688999999999 66899999999999999999999999999999999999999 999999999999999999975
Q ss_pred CCCCCCCcceeeee---cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC------------------
Q 016974 141 PTDKDGNLPVSRML---SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG------------------ 199 (379)
Q Consensus 141 ~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~------------------ 199 (379)
.. ....+ .+|...|.++.|+|++ ..|++++.|+.|++||+.++.....+..
T Consensus 148 ~~-------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 148 DT-------LVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp TE-------EEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred Ce-------EEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 32 23334 6899999999999975 6899999999999999987533211110
Q ss_pred -----ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc-------------ceEEEecccCCeeEEEEccC
Q 016974 200 -----EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASR-------------AVRTFHGHEGDVNTVKFFPD 261 (379)
Q Consensus 200 -----~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~-------------~~~~~~~h~~~v~~v~~sp~ 261 (379)
....+|...|.++.++ ++++++++.|+.|++||++.... .+..+.+|...|++++|+|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD 296 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC
T ss_pred ccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC
Confidence 0112488899999998 45899999999999999875432 36678889999999999999
Q ss_pred --CCEEEEeeCCCeEEEEECCCCceeE-EEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 262 --GNRFGTGSDDGTCRLFDIRTGHQLQ-VYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 262 --g~~l~s~s~D~~i~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
+++|++|+.||.|++||+.+++... .........+...|++++|+|+|++|++|+.||.|++||+.
T Consensus 297 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 297 FWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999999999999876432 11111112224579999999999999999999999999964
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.6e-35 Score=263.54 Aligned_cols=255 Identities=26% Similarity=0.364 Sum_probs=209.9
Q ss_pred ceeeEeecCCcceEEEEECCC-CCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEee
Q 016974 100 QKTHAIKLPCAWVMTCAFSPT-GQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSS 178 (379)
Q Consensus 100 ~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 178 (379)
+...++++|.+.|.+++|+|+ +++|++||.|++|+|||+....... ....+.+.+|...|.++.|+|++ .+|++++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~--~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~ 105 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY--GIPQRALRGHSHFVSDVVISSDG-QFALSGS 105 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS--EEEEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc--ceeeEEEeCCCCCEEEEEECCCC-CEEEEEc
Confidence 345678999999999999998 6899999999999999998643221 22456788999999999999975 6899999
Q ss_pred CCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEE
Q 016974 179 GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKF 258 (379)
Q Consensus 179 ~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~ 258 (379)
.|+.|++|+.......... ..+...+....+.+ .+.++++|+.|+.+++||............+|...+..++|
T Consensus 106 ~d~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRF-----VGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp TTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred ccccceEEeecccceeeee-----cCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 9999999999887665544 34556677777775 56789999999999999987654555556789999999999
Q ss_pred ccCC--CEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecc
Q 016974 259 FPDG--NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLG 336 (379)
Q Consensus 259 sp~g--~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~ 336 (379)
++++ .++++++.|++|++||+++++.+..+.. +...|++++|+|+|++|++|+.||.|++||..+.+.+..+
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~- 253 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-----HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL- 253 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE-
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-----CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee-
Confidence 9864 5789999999999999999887665532 3457999999999999999999999999999988877665
Q ss_pred cccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 337 SLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 337 ~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
. +...|.+++|+|++.++ +++.|++|++|++..
T Consensus 254 ---~-~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 254 ---D-GGDIINALCFSPNRYWL-CAATGPSIKIWDLEG 286 (340)
T ss_dssp ---E-CSSCEEEEEECSSSSEE-EEEETTEEEEEETTT
T ss_pred ---c-CCceEEeeecCCCCcee-eccCCCEEEEEECCC
Confidence 2 44689999999987655 567899999999875
No 89
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.9e-36 Score=278.10 Aligned_cols=258 Identities=15% Similarity=0.278 Sum_probs=215.5
Q ss_pred eccccccccEEEEEeeCC-CCeEEEEcCCCcEEEEECCC----------CceeeEeecCCcceEEEEECCCCC-EEEEee
Q 016974 61 RTLQGHAGKVYSLDWTSE-RNRIVSASQDGRLIVWNALT----------SQKTHAIKLPCAWVMTCAFSPTGQ-SVACGG 128 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~-~~~l~s~s~D~~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~ 128 (379)
..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.+ .+....+..|...+.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 456689999999999997 67899999999999999976 567788889999999999999998 999999
Q ss_pred CCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCe---eEEEecCccccCC
Q 016974 129 LDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGL---RTSVFGGEFQSGH 205 (379)
Q Consensus 129 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~~~~~~h 205 (379)
.|+.|++|++...............+.+|...|.+++|+|++...|++++.|+.|++||++++. ....+ ..|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-----~~~ 276 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-----DAH 276 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-----ECC
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-----ecC
Confidence 9999999999863221111122455678999999999999777889999999999999998762 23222 478
Q ss_pred ccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCC-EEEEeeCCCeEEEEECCCC--
Q 016974 206 TADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGN-RFGTGSDDGTCRLFDIRTG-- 282 (379)
Q Consensus 206 ~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~l~s~s~D~~i~iwd~~~~-- 282 (379)
...|.+++|+|.+..++++|+.||.|++||++.....+..+.+|...|.+++|+|++. +|++++.|+.|++||+...
T Consensus 277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 8899999999876668999999999999999976677888999999999999999985 6999999999999999862
Q ss_pred ------------ceeEEEeeccCCCCCCCeEEEEEccCCC-EEEEEEecCcEEEEeCCC
Q 016974 283 ------------HQLQVYYQQHGENEIPHVTSIAFSISGR-LLFAGYSNGDCYVWDTLL 328 (379)
Q Consensus 283 ------------~~~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~ 328 (379)
..+..+ ..+...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 357 ~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIH-----GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCCHHHHHHCCTTEEEEC-----CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccCccccccCCcceEEEc-----CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 222221 22345699999999999 899999999999999754
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=275.91 Aligned_cols=280 Identities=13% Similarity=0.056 Sum_probs=213.2
Q ss_pred EEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCC----CCCCC
Q 016974 72 SLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPT----DKDGN 147 (379)
Q Consensus 72 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~----~~~~~ 147 (379)
...+.+++++|++|+.||+|++||+.+++.+..+. ...+.++.|+|+ +++++.|+++++|+.+... ...+.
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 33455678899999999999999999998887776 345677788888 9999999999999876421 00111
Q ss_pred cceeeeecccccceEEEEEec--CCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 148 LPVSRMLSGHKGYVSCCQYVP--DEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 148 ~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
.......+|.+.|.+++|+| ++ .++++++.|++|++||++++....... ..|...+.+++|+| ++.++++|
T Consensus 116 -~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~----~~~~~~i~~~~~~p-dg~~lasg 188 (343)
T 3lrv_A 116 -VLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHS----AKSDVEYSSGVLHK-DSLLLALY 188 (343)
T ss_dssp -EEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEEC----CCSSCCCCEEEECT-TSCEEEEE
T ss_pred -eeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEe----cCCCCceEEEEECC-CCCEEEEE
Confidence 12223346778999999999 65 689999999999999999887654432 24555799999997 77899999
Q ss_pred cCCCcEEEEEccCCccceEEEec-ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCe--EE
Q 016974 226 SCDSTARLWDTRVASRAVRTFHG-HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHV--TS 302 (379)
Q Consensus 226 ~~d~~i~vwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v--~~ 302 (379)
+.||.|++||++........+.+ |.++|++++|+|+|.+|+++++| +|++||+++++.+..+.... .+...+ .+
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~ 265 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYT--IPEFKTGTVT 265 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCB--C-----CCEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccc--cccccccceE
Confidence 99999999999977544367777 99999999999999999999954 99999999876543322100 011122 47
Q ss_pred EEEccCCCEEEEEEe-cCcEEEEeCCCceEEEecccccCCccCceeEEEECC---CCCeEEEeeCCCcEEEEecCc
Q 016974 303 IAFSISGRLLFAGYS-NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSA---DGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 303 ~~fs~~g~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~---d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++|+|+|++|++++. |+.|++|+.......... .++.+++|+| +++.|++++.|+.++++-..+
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccccceEe--------cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 999999999999998 999999997544321111 4677888988 899999999999999986554
No 91
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-37 Score=291.94 Aligned_cols=244 Identities=14% Similarity=0.029 Sum_probs=184.0
Q ss_pred CCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC-----CceEEEeeCCCeEEEeecCCCee
Q 016974 119 PTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-----DTHLITSSGDQTCVLWDITTGLR 193 (379)
Q Consensus 119 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----~~~l~s~~~d~~i~~wd~~~~~~ 193 (379)
|+++.+++++.|++|+||++..... .......+.+|.+.|.+++|+|+. ..+|++++.|++|++||+.++..
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~---~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~ 247 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTL---HCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNAT 247 (524)
T ss_dssp -----------CEEEEEEEEETTTC---CEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSS
T ss_pred hhhhhhccCCCCceEEEEEccCCCC---CceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcc
Confidence 3344455577889999999875321 111123456788999999999961 35899999999999999976532
Q ss_pred E----EEec--CccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEE--EEccCC-CE
Q 016974 194 T----SVFG--GEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTV--KFFPDG-NR 264 (379)
Q Consensus 194 ~----~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v--~~sp~g-~~ 264 (379)
. .... .....+|...|.+++|++. ..|++|+.||+|++||++....+...+.+|...|.+| +|+|+| ++
T Consensus 248 ~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 248 DVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp SSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCE
T ss_pred ccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeE
Confidence 1 0000 0012578899999999863 4799999999999999986655666788999999999 578888 89
Q ss_pred EEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccC
Q 016974 265 FGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEG 344 (379)
Q Consensus 265 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~ 344 (379)
|||||.|++|+|||+++++.+..+.... . ...|.+++|+|+++.+++++.|++|++||+..+....++ .+|.+
T Consensus 326 laS~S~D~tvklWD~~~~~~~~~~~~~~-~--~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l----~gH~~ 398 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTKTTVSRF-R--GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL----VSRET 398 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHCEEEEEC-S--CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE----EECSS
T ss_pred EEEeccCCeEEEEECCCCCccccccccc-c--cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee----ecCCC
Confidence 9999999999999999876554443211 1 124788999999999999999999999998877654444 46999
Q ss_pred ceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 345 RITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 345 ~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.|++++|+|+|++|++||.|++|++|++..
T Consensus 399 ~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 399 TITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred ceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 999999999999999999999999999654
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-36 Score=285.16 Aligned_cols=285 Identities=13% Similarity=0.187 Sum_probs=219.8
Q ss_pred EeeCCCCeEEEEcCCCcEEEEECCCCceeeEe-ecCCcceEEEEECC-CCCEEEEeeCCCcEEEEEcCCCCCCCCCccee
Q 016974 74 DWTSERNRIVSASQDGRLIVWNALTSQKTHAI-KLPCAWVMTCAFSP-TGQSVACGGLDSVCSIFNLNSPTDKDGNLPVS 151 (379)
Q Consensus 74 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 151 (379)
.|+|+++.+++++ .|+ .+++.+..+ ..|...|.+++|+| ++++|++|+.|++|++||+....... .....
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~ 105 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE-VYSSS 105 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-CCSCS
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-cccee
Confidence 3678888887765 387 557888888 78889999999999 99999999999999999986411000 01111
Q ss_pred eeecccccceEEEEEecCCCceEEEeeCCCeEEEeecC---CCeeEEEecCc------ccc-CCccCeEEEEEe-CCCCc
Q 016974 152 RMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDIT---TGLRTSVFGGE------FQS-GHTADVLSVSIS-GSNSR 220 (379)
Q Consensus 152 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~---~~~~~~~~~~~------~~~-~h~~~v~~~~~~-~~~~~ 220 (379)
. ..+|.+.|.+++|+|++ ..|++++.|++|++||+. ++......... +.. ++...+.++.+. ..++.
T Consensus 106 ~-~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 106 L-TYDCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp E-EEECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred e-eccCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 1 22689999999999964 689999999999999994 44332222110 001 145566666633 13678
Q ss_pred EEEEecCCCcEEEEEccCCccceEEEec--ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCC
Q 016974 221 MFVSGSCDSTARLWDTRVASRAVRTFHG--HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIP 298 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~~~~~~~~--h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 298 (379)
++++|+.|+.|++||++.. +.+..+.+ |...|++++|+|++++|++|+.|++|++||+++++.+..+...+ ..
T Consensus 184 ~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~ 258 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTL-ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD----HA 258 (437)
T ss_dssp EEEEEETTSEEEEEETTTC-CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT----CE
T ss_pred EEEEEeCCCeEEEEeCCCC-eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC----CC
Confidence 9999999999999999865 56777877 89999999999999999999999999999999988776653222 23
Q ss_pred CeEEEEE----ccCCCEEEEEEecCcEEEEeCCCceEEEeccccc--------------------C--CccCceeEEEEC
Q 016974 299 HVTSIAF----SISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQ--------------------N--SHEGRITCLGLS 352 (379)
Q Consensus 299 ~v~~~~f----s~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--------------------~--~h~~~v~~~~~s 352 (379)
.|.+++| +|++++|++|+.||.|++||+.+++....+.... . .|...|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 6899955 4568899999999999999998887665553110 1 277889999999
Q ss_pred CCCCeEEEeeCCCcEEEEecCc
Q 016974 353 ADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 353 ~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++++|++|+.|++|++|++..
T Consensus 339 -~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 339 -NDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp -TTEEEEEEGGGTEEEEEETTC
T ss_pred -CceEEEecCCCCeEEEEECCC
Confidence 889999999999999999875
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.5e-35 Score=273.62 Aligned_cols=263 Identities=22% Similarity=0.332 Sum_probs=210.9
Q ss_pred eEeecCCcceEEEEECCC-CCEEEEeeCCCcEEEEEcCCCCCC---CCCcceeeeecccccceEEEEEecCCCceEEEee
Q 016974 103 HAIKLPCAWVMTCAFSPT-GQSVACGGLDSVCSIFNLNSPTDK---DGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSS 178 (379)
Q Consensus 103 ~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 178 (379)
.....|.+.|.+++|+|+ +.++++++.|+.|++|++...... .+.......+.+|...|.+++|+|++...|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344567788999999997 689999999999999999752111 1123345667899999999999998766899999
Q ss_pred CCCeEEEeecCCCeeE--EEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCc--cceEEEecccCCee
Q 016974 179 GDQTCVLWDITTGLRT--SVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVAS--RAVRTFHGHEGDVN 254 (379)
Q Consensus 179 ~d~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~--~~~~~~~~h~~~v~ 254 (379)
.||+|++||+.++... .........+|...|.+++|+|.++.+|++++.|+.|++||++... ..+..+.+|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 9999999999873210 0000111247889999999998788899999999999999998653 46667789999999
Q ss_pred EEEEccCCC-EEEEeeCCCeEEEEECCCC-ceeEEEeeccCCCCCCCeEEEEEccCCC-EEEEEEecCcEEEEeCCCc--
Q 016974 255 TVKFFPDGN-RFGTGSDDGTCRLFDIRTG-HQLQVYYQQHGENEIPHVTSIAFSISGR-LLFAGYSNGDCYVWDTLLA-- 329 (379)
Q Consensus 255 ~v~~sp~g~-~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~~-- 329 (379)
+++|+|++. +|++|+.|++|++||+++. ..+..+.. +...|.+++|+|+++ +|++++.||.|++||+...
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-----h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-----CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-----CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 999999887 6899999999999999984 44444432 234699999999995 7999999999999998762
Q ss_pred ------------eEEEecccccCCccCceeEEEECCCCC-eEEEeeCCCcEEEEecCc
Q 016974 330 ------------KVVLNLGSLQNSHEGRITCLGLSADGS-ALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 330 ------------~~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~s~s~D~~i~vw~~~~ 374 (379)
...... .+|...|++++|+|+++ +|++++.||+|+||++..
T Consensus 357 ~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIH----GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCCHHHHHHCCTTEEEEC----CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccCccccccCCcceEEEc----CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 333333 57889999999999999 899999999999999875
No 94
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-35 Score=270.28 Aligned_cols=251 Identities=16% Similarity=0.242 Sum_probs=210.9
Q ss_pred ccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCC
Q 016974 66 HAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~ 145 (379)
|...|++++|+|++++|++|+.||.|++||+.+++....+..|...|.+++| ++.++++++.|+.+++||+....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--- 207 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN--- 207 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS---
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc---
Confidence 8899999999999999999999999999999999999999999999999999 56899999999999999997422
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
.....+.+|.+.|.++.|+|++ ..|++|+.|+.|++||+.++.....+ ..|...|.+++++|.+..++++|
T Consensus 208 ---~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 208 ---HQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTK-----TNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp ---CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEE-----CCCSSCCCEEEECTTSTTEEEEE
T ss_pred ---ceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEe-----cCCcceEEEEEECCCCCCEEEEe
Confidence 2345678899999999999964 68999999999999999988766655 56888999999999777888887
Q ss_pred c--CCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEE--eeCCCeEEEEECCCCceeEEEeeccCCCCCCCeE
Q 016974 226 S--CDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGT--GSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVT 301 (379)
Q Consensus 226 ~--~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s--~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 301 (379)
+ .|+.|++||++.. ..+..+. |...|.+++|+|++.++++ |+.|+.|++||+.++........ ..+...|.
T Consensus 279 ~gs~d~~i~i~d~~~~-~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~---~~h~~~v~ 353 (401)
T 4aez_A 279 GGTMDKQIHFWNAATG-ARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI---PAHDTRVL 353 (401)
T ss_dssp CCTTTCEEEEEETTTC-CEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE---ECCSSCCC
T ss_pred cCCCCCEEEEEECCCC-CEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe---cCCCCCEE
Confidence 6 8999999999865 4555664 6678999999999999999 44899999999998765544321 12345699
Q ss_pred EEEEccCCCEEEEEEecCcEEEEeCCCceEEEec
Q 016974 302 SIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNL 335 (379)
Q Consensus 302 ~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~ 335 (379)
+++|+|+|++|++|+.||.|++||+.+++.+...
T Consensus 354 ~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 354 YSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 9999999999999999999999999887765443
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-36 Score=279.25 Aligned_cols=254 Identities=12% Similarity=0.131 Sum_probs=195.2
Q ss_pred eecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEE
Q 016974 105 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCV 184 (379)
Q Consensus 105 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 184 (379)
...+...|.+++|+|+|++|++++.|+.|++|++... .......+.+|.+.|.+++|+|++ .+|++++.|++|+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN-----GWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAY 80 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT-----EEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC-----ceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEE
Confidence 3455678999999999999999999999999999753 112445678999999999999985 6899999999999
Q ss_pred EeecCCCe---eEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc--ceEEEec-ccCCeeEEEE
Q 016974 185 LWDITTGL---RTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASR--AVRTFHG-HEGDVNTVKF 258 (379)
Q Consensus 185 ~wd~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~--~~~~~~~-h~~~v~~v~~ 258 (379)
+||+.++. ....+ .+|...|.++.|++ ++++|++|+.|+.|++||++.... ....+.+ |...|.+++|
T Consensus 81 vwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVL-----LRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp EC------CCCCEEEC-----CCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred EEEcCCCCceeeeeEe-----cccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 99998865 23222 57889999999997 677899999999999999986532 4567777 9999999999
Q ss_pred ccCCCEEEEeeCCCeEEEEECCCCc--------------eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEE
Q 016974 259 FPDGNRFGTGSDDGTCRLFDIRTGH--------------QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVW 324 (379)
Q Consensus 259 sp~g~~l~s~s~D~~i~iwd~~~~~--------------~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iw 324 (379)
+|++++|++++.|++|++||++... ......... .+...|.+++|+|+|++|++|+.||.|++|
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999999999999999986322 011111111 345679999999999999999999999999
Q ss_pred eCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 325 DTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 325 d~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
|+.+++...........|..+|.+++|+|++++|++|+.|+.+ +|+..
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9887764211111125789999999999999999999877777 66554
No 96
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-34 Score=270.00 Aligned_cols=251 Identities=16% Similarity=0.270 Sum_probs=209.9
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 141 (379)
.+.+|.+.|++|+|+|+|++|++|+.||+|+|||+.+++.+..+..|...+.++++ ++.++++++.|+.+++||....
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeeccc
Confidence 45678889999999999999999999999999999999999999999988887766 5789999999999999998653
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
. .....+.+|...+..+.|.|++ ..+++++.|+.+++||..++...... ......|...|.+++++|.+..+
T Consensus 220 ~------~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~-~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 220 E------HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVP-LQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp S------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCC-SEEECCCSSCEEEEEECTTCTTE
T ss_pred c------eeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeecccccccee-eeeecccCCceeeeeeCCCcccE
Confidence 2 2445678999999999999975 68999999999999999875421110 11125788899999999988888
Q ss_pred EEE--ecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee--CCCeEEEEECCCCceeEEEeeccCCCCC
Q 016974 222 FVS--GSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS--DDGTCRLFDIRTGHQLQVYYQQHGENEI 297 (379)
Q Consensus 222 l~s--g~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 297 (379)
+++ |+.|+.|++||+... .....+..| ..+.++.|+|+++.+++++ .|+.|+|||+.+++.+..+.. |.
T Consensus 292 la~~~gs~D~~I~iwd~~t~-~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g-----H~ 364 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSG-ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-----HT 364 (420)
T ss_dssp EEEEECTTTCEEEEEETTTT-EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-----CS
T ss_pred EEEEeecCCCEEEEEeCCcc-ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC-----CC
Confidence 775 568999999999865 455556544 5789999999999988765 799999999999998877632 34
Q ss_pred CCeEEEEEccCCCEEEEEEecCcEEEEeCCCc
Q 016974 298 PHVTSIAFSISGRLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 298 ~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~ 329 (379)
..|++++|+|+|++|++|+.||+|+|||+...
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 57999999999999999999999999998654
No 97
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.2e-35 Score=272.19 Aligned_cols=263 Identities=12% Similarity=0.129 Sum_probs=215.1
Q ss_pred EeeccccccccEEEEEeeCC----C---CeEEEEcCCCcEEEEECCCCce-----eeEeecC-----CcceEEEEEC---
Q 016974 59 CCRTLQGHAGKVYSLDWTSE----R---NRIVSASQDGRLIVWNALTSQK-----THAIKLP-----CAWVMTCAFS--- 118 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~----~---~~l~s~s~D~~v~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~s--- 118 (379)
....+.+|...|++++|+|+ + ++|++++.|++|++||+.+++. ...+..+ ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 34577899999999999999 9 9999999999999999988886 7778777 4889999999
Q ss_pred -CCCCE-EEEeeCCCcEEEEEcCC------CCCCCCCcceeeee-------cccccceEEEEEecCCCceEEEeeCCCeE
Q 016974 119 -PTGQS-VACGGLDSVCSIFNLNS------PTDKDGNLPVSRML-------SGHKGYVSCCQYVPDEDTHLITSSGDQTC 183 (379)
Q Consensus 119 -~~g~~-l~~~~~d~~i~iw~~~~------~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 183 (379)
|++++ |++++.|+.+++||+.. ..... ......+ ..|...|.+++|+|++ .|++++.|+.|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i 209 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN--WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTV 209 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceee--ccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcE
Confidence 99999 99999999999999986 22110 1111134 4488899999999976 89999999999
Q ss_pred EEeecCCCeeEEEecCccccCC---ccCeEEEEEeCCCCcEEEEecCC---CcEEEEEccCCccceEEEec---------
Q 016974 184 VLWDITTGLRTSVFGGEFQSGH---TADVLSVSISGSNSRMFVSGSCD---STARLWDTRVASRAVRTFHG--------- 248 (379)
Q Consensus 184 ~~wd~~~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~sg~~d---~~i~vwd~~~~~~~~~~~~~--------- 248 (379)
++||++++.....+... .+| ...+.+++|++ ++++|++++.| +.|++||++.. +.+..+.+
T Consensus 210 ~i~d~~~~~~~~~~~~~--~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~ 285 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQ--HSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASL 285 (397)
T ss_dssp EEEETTTTEEEEEEECC--C---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------
T ss_pred EEEECCCCceeEEEecc--ccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCC-cccceeccCcccccccc
Confidence 99999988776665210 127 88999999997 67899999999 99999999865 56778888
Q ss_pred ----ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEee-----cc------C-----CCCCCCeEEEEEccC
Q 016974 249 ----HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQ-----QH------G-----ENEIPHVTSIAFSIS 308 (379)
Q Consensus 249 ----h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~-----~~------~-----~~~~~~v~~~~fs~~ 308 (379)
|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. .+ + ..+...|.+++|+|+
T Consensus 286 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 286 GEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred cccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence 999999999999999999999999999999999988777651 11 0 001567999999999
Q ss_pred C----------CEEEEEEecCcEEEEeCCCc
Q 016974 309 G----------RLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 309 g----------~~l~sg~~dg~i~iwd~~~~ 329 (379)
| ++|++|+.||.|++||+.++
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9 79999999999999997654
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=276.97 Aligned_cols=259 Identities=21% Similarity=0.364 Sum_probs=200.1
Q ss_pred CcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCC----CCCCcceeeeecccc------------cceEEEEEecCCC-
Q 016974 109 CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTD----KDGNLPVSRMLSGHK------------GYVSCCQYVPDED- 171 (379)
Q Consensus 109 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~~~~h~------------~~v~~~~~~~~~~- 171 (379)
...|.+++|+|+|++|++|+.|+.|+||++..... ..........+.+|. +.|.+++|+|+++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 46799999999999999999999999999986431 122333566788998 8899999999853
Q ss_pred ceEEEeeCCCeEEEeecCCCeeEEE-----------------------------------ecCccccCCccCeEEEEEeC
Q 016974 172 THLITSSGDQTCVLWDITTGLRTSV-----------------------------------FGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 172 ~~l~s~~~d~~i~~wd~~~~~~~~~-----------------------------------~~~~~~~~h~~~v~~~~~~~ 216 (379)
..|++++.|++|++||+.++..... ....+..+|...|.+++|++
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 5799999999999999876432110 00011357999999999998
Q ss_pred CCCcEEEEecCCCcEEEEEccCCccceEE-------EecccCCeeEEEEccCC-CEEEEeeCCCeEEEEECCCCce----
Q 016974 217 SNSRMFVSGSCDSTARLWDTRVASRAVRT-------FHGHEGDVNTVKFFPDG-NRFGTGSDDGTCRLFDIRTGHQ---- 284 (379)
Q Consensus 217 ~~~~~l~sg~~d~~i~vwd~~~~~~~~~~-------~~~h~~~v~~v~~sp~g-~~l~s~s~D~~i~iwd~~~~~~---- 284 (379)
++++|++| .|+.|++||++........ +.+|...|.+++|+|++ .+|++|+.|++|++||+++++.
T Consensus 188 -~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 188 -DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp -TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred -CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 67789998 7999999999844344432 45899999999999998 9999999999999999998875
Q ss_pred eEEEeeccCCC-------CCCCeEEEEEccCCCEEEEEEecCcEEEEeCCC-ceEEEecccccCCccCc-----------
Q 016974 285 LQVYYQQHGEN-------EIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLL-AKVVLNLGSLQNSHEGR----------- 345 (379)
Q Consensus 285 ~~~~~~~~~~~-------~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~h~~~----------- 345 (379)
+..+....... +...|.+++|+|+|++|++|+. +.|++||+.. ++.+..+ .+|...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~----~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY----QVHEYLRSKLCSLYEND 340 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE----ESCGGGTTTHHHHHHTS
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee----ecccccccccccccccc
Confidence 44443211100 0126999999999999999998 9999999876 5544333 344321
Q ss_pred ----eeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 346 ----ITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 346 ----v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+..++|+|++++|++|+.||+|++|++..
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 33489999999999999999999999875
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.9e-34 Score=263.29 Aligned_cols=250 Identities=15% Similarity=0.188 Sum_probs=208.4
Q ss_pred eecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEE
Q 016974 105 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCV 184 (379)
Q Consensus 105 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 184 (379)
+..|...|.+++|+|++++|++++.|+.+++||+... +......+.+|...|.+++|+|++ .+|++++.|+.|+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-----KWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAY 77 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-----EEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-----cEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEE
Confidence 4457788999999999999999999999999998752 222456678999999999999975 6899999999999
Q ss_pred EeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc---ceEEEecccCCeeEEEEccC
Q 016974 185 LWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASR---AVRTFHGHEGDVNTVKFFPD 261 (379)
Q Consensus 185 ~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~---~~~~~~~h~~~v~~v~~sp~ 261 (379)
+||+.++....... ...|...+.++.|++ +++++++++.|+.|++||++.... ......+|...|.+++|+|+
T Consensus 78 vwd~~~~~~~~~~~---~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 78 VWTLKGRTWKPTLV---ILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp EEEEETTEEEEEEE---CCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred EEECCCCeeeeeEE---eecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 99998876433321 146888999999997 678999999999999999986532 22233678899999999999
Q ss_pred CCEEEEeeCCCeEEEEECC------------------CCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEE
Q 016974 262 GNRFGTGSDDGTCRLFDIR------------------TGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYV 323 (379)
Q Consensus 262 g~~l~s~s~D~~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~i 323 (379)
+++|++++.|+.|++||++ .++.+..+. .+...|.+++|+|++++|++|+.||.|++
T Consensus 154 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 228 (372)
T 1k8k_C 154 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-----SSCGWVHGVCFSANGSRVAWVSHDSTVCL 228 (372)
T ss_dssp SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-----CCSSCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-----CCCCeEEEEEECCCCCEEEEEeCCCEEEE
Confidence 9999999999999999964 445444432 23457999999999999999999999999
Q ss_pred EeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 324 WDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 324 wd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
||..+++.+..+ ..|..+|.+++|+|++++|++| .|+.|++|++..
T Consensus 229 ~d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 229 ADADKKMAVATL----ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEGGGTTEEEEE----ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EECCCCceeEEE----ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999888877666 5688899999999999998887 999999999864
No 100
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-34 Score=266.64 Aligned_cols=262 Identities=15% Similarity=0.122 Sum_probs=206.0
Q ss_pred EECCCCceeeEeecCCcceEEEEECCCC-CEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCc
Q 016974 94 WNALTSQKTHAIKLPCAWVMTCAFSPTG-QSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDT 172 (379)
Q Consensus 94 wd~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 172 (379)
|+....+....+..|...|.+++|+|++ ++|++++.|+.|++||+.... ........+|.+.|.+++|+|+++.
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~ 132 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN-----KTSFIQGMGPGDAITGMKFNQFNTN 132 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT-----CEEEECCCSTTCBEEEEEEETTEEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc-----cceeeecCCcCCceeEEEeCCCCCC
Confidence 3334455556777888999999999999 999999999999999997532 1122223479999999999996567
Q ss_pred eEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCC
Q 016974 173 HLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGD 252 (379)
Q Consensus 173 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~ 252 (379)
.|++++.|++|++||+.+.. ...+.. ...|...+.++++++ +++++++|+.|+.|++||++ ...+..+.+|...
T Consensus 133 ~l~s~~~d~~i~iwd~~~~~-~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~ 206 (383)
T 3ei3_B 133 QLFVSSIRGATTLRDFSGSV-IQVFAK--TDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAK 206 (383)
T ss_dssp EEEEEETTTEEEEEETTSCE-EEEEEC--CCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT--SCEEEEEECSSSC
T ss_pred EEEEEeCCCEEEEEECCCCc-eEEEec--cCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC--CCEEEEeccCCCc
Confidence 89999999999999998643 333321 134567899999997 67799999999999999985 3577888999999
Q ss_pred eeEEEEccCCC-EEEEeeCCCeEEEEECCC----CceeEEEeeccCCCCCCCeEEEEEcc-CCCEEEEEEecCcEEEEeC
Q 016974 253 VNTVKFFPDGN-RFGTGSDDGTCRLFDIRT----GHQLQVYYQQHGENEIPHVTSIAFSI-SGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 253 v~~v~~sp~g~-~l~s~s~D~~i~iwd~~~----~~~~~~~~~~~~~~~~~~v~~~~fs~-~g~~l~sg~~dg~i~iwd~ 326 (379)
|.+++|+|++. +|++++.|++|++||+++ +..+..+ . +...|.+++|+| +|++|++++.||.|++||+
T Consensus 207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~-----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-P-----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-E-----CSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-c-----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 99999999999 999999999999999987 4444433 1 234799999999 9999999999999999998
Q ss_pred CCceEEEecccc---cCCcc----------CceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 327 LLAKVVLNLGSL---QNSHE----------GRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 327 ~~~~~~~~~~~~---~~~h~----------~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.+++....+... ...|. +.+..++|+|||++ +|+.|++|++|++..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~ 339 (383)
T 3ei3_B 281 YDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS 339 (383)
T ss_dssp TBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTT
T ss_pred CCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCC
Confidence 765443222110 01122 34556788888887 889999999999865
No 101
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-35 Score=276.64 Aligned_cols=256 Identities=18% Similarity=0.212 Sum_probs=196.9
Q ss_pred EeeccccccccEEEEEeeC-CCCeEEEEcCCCcEEEEECCCCceeeEee--cCCcceEEEEECCCCCEEEEeeCCCcEEE
Q 016974 59 CCRTLQGHAGKVYSLDWTS-ERNRIVSASQDGRLIVWNALTSQKTHAIK--LPCAWVMTCAFSPTGQSVACGGLDSVCSI 135 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~d~~i~i 135 (379)
....+.||.+.|++|+|+| ++++|+|||.||+|++||+.++....... .+...+.+++|+|++++|++|+.|+.|++
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL 235 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee
Confidence 3456779999999999998 68899999999999999997654332222 23345788999999999999999999999
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
||++.. ....+.+|...|.+++|+|++..+|++|+.|++|++||+++......+ ....+|...|.+++|+
T Consensus 236 wd~~~~--------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~--~~~~~h~~~v~~~~~s 305 (435)
T 4e54_B 236 LNMDGK--------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF--LYSLPHRHPVNAACFS 305 (435)
T ss_dssp EESSSC--------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC--SBCCBCSSCEEECCBC
T ss_pred eccCcc--------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE--EEeeeccccccceeEC
Confidence 998642 234567899999999999988778999999999999999875432222 1125788999999999
Q ss_pred CCCCcEEEEecCCCcEEEEEccCCccceEEEecccC------CeeEEEEccCCCEEEEee------------CCCeEEEE
Q 016974 216 GSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEG------DVNTVKFFPDGNRFGTGS------------DDGTCRLF 277 (379)
Q Consensus 216 ~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~------~v~~v~~sp~g~~l~s~s------------~D~~i~iw 277 (379)
| ++.+|++|+.|+.|++||++... ....+.+|.. .+..+.|+|++.++++++ .++.|++|
T Consensus 306 p-dg~~l~s~~~D~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iw 383 (435)
T 4e54_B 306 P-DGARLLTTDQKSEIRVYSASQWD-CPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVF 383 (435)
T ss_dssp T-TSSEEEEEESSSCEEEEESSSSS-SEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEE
T ss_pred C-CCCeeEEEcCCCEEEEEECCCCc-cceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEE
Confidence 7 67899999999999999998653 4444555542 234556777777776654 34679999
Q ss_pred ECCCCceeEEEeeccCCCCCCCeEEE-EEccCCCEEEEEEecCcEEEEeCCCceE
Q 016974 278 DIRTGHQLQVYYQQHGENEIPHVTSI-AFSISGRLLFAGYSNGDCYVWDTLLAKV 331 (379)
Q Consensus 278 d~~~~~~~~~~~~~~~~~~~~~v~~~-~fs~~g~~l~sg~~dg~i~iwd~~~~~~ 331 (379)
|..+++.+..+...+ ...|.++ +|+|+|++|++|+ |+.|+|||+..++.
T Consensus 384 d~~~g~~~~~l~~~~----~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 384 DGNSGKMMCQLYDPE----SSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CSSSCCEEEEECCSS----CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred ECCCCcEEEEEeCCC----CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 999998877664433 3346666 6999999999876 78999999877653
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.6e-36 Score=277.73 Aligned_cols=248 Identities=15% Similarity=0.110 Sum_probs=175.3
Q ss_pred EEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecC-------CCceEEEeeCCCeEEEee
Q 016974 115 CAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPD-------EDTHLITSSGDQTCVLWD 187 (379)
Q Consensus 115 ~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-------~~~~l~s~~~d~~i~~wd 187 (379)
..+++++.+|++++.|++|+|||+...... .......+.||.+.|.+++|+|. ++.+|++|+.|++|++||
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~--~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETII--TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEE--EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccc--eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 344556778999999999999998753211 11233457899999999999972 346899999999999999
Q ss_pred cCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccce------------------------
Q 016974 188 ITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAV------------------------ 243 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~------------------------ 243 (379)
+.++...... ..|...+.+++|+|.+..+|++|+.|+.|++||++......
T Consensus 173 ~~~~~~~~~~-----~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 173 LTDEGPILAG-----YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EETTEEEEEE-----EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred CCCCceeeee-----cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9887655444 46888999999999777799999999999999987542211
Q ss_pred EEEecccCCeeEEEEc-cCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCC-------------CCCCCeEEEEEcc--
Q 016974 244 RTFHGHEGDVNTVKFF-PDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE-------------NEIPHVTSIAFSI-- 307 (379)
Q Consensus 244 ~~~~~h~~~v~~v~~s-p~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~-------------~~~~~v~~~~fs~-- 307 (379)
....+|...|.++.|+ |+|..|++++.|+++++||+..++....+...... ..........|+|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 1224678889999997 79999999999999999999876654333211100 0001112234444
Q ss_pred CCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 308 SGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 308 ~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++.++++|+.||.|++||..++.....+ ..|..+|.+++|+|||++||+++.|| +.+|++-+
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~----~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSNSIP----IQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCCEEE----EECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEe----cCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 4447778889999999999877655444 45778999999999999999999877 44444433
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=7.2e-34 Score=249.84 Aligned_cols=303 Identities=16% Similarity=0.182 Sum_probs=198.9
Q ss_pred cCCcceeEeecccccccc----EEEEEeeCCCC---eEEEEcCCCcEEEEECCCC---ceeeEeecCCcceEEEEECCCC
Q 016974 52 FGPTDLVCCRTLQGHAGK----VYSLDWTSERN---RIVSASQDGRLIVWNALTS---QKTHAIKLPCAWVMTCAFSPTG 121 (379)
Q Consensus 52 ~~~~~~~~~~~l~gH~~~----v~~~~~~~~~~---~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~g 121 (379)
..|..+....+|+.-.+. +.++-|-..+- -+++++. .+|++|+..++ +++++..++..+|..++|.|+-
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (356)
T 2w18_A 20 INPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDV 98 (356)
T ss_dssp ----CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTC
T ss_pred cCcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcc
Confidence 344555666666655443 56677755443 4677665 47999999998 7889999999899999999976
Q ss_pred CEEEEeeC--CCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEee--CCCeEEEeecCC-CeeEEE
Q 016974 122 QSVACGGL--DSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSS--GDQTCVLWDITT-GLRTSV 196 (379)
Q Consensus 122 ~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~d~~i~~wd~~~-~~~~~~ 196 (379)
..|+|..- =..-.++.+--... +..........+|...|..+ + +++.+.+++ .|+.|++|++.. +.....
T Consensus 99 ~~~~~~~~~~~~~~~v~sla~spd-~~~~~~~l~s~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s 173 (356)
T 2w18_A 99 YNLVCVALGNLEIREIRALFCSSD-DESEKQVLLKSGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKEN 173 (356)
T ss_dssp CSCEEEEECSSSEEEEEEECC-------CCEEEEEEEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEE
T ss_pred cceeeeeeccccccceEEEEECCC-ccccccEEEeCCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeee
Confidence 54444321 11112222221000 00001111123455445443 3 344444423 599999999944 654444
Q ss_pred ecCccccCCccCeEEEEEeC--CCCcEEEEecCCCcEEEEEccCCccceEEEecccC---CeeEEEEccCCCEE------
Q 016974 197 FGGEFQSGHTADVLSVSISG--SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEG---DVNTVKFFPDGNRF------ 265 (379)
Q Consensus 197 ~~~~~~~~h~~~v~~~~~~~--~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~---~v~~v~~sp~g~~l------ 265 (379)
+ .+|...+..++|++ .++.+|++|+.|++|+|||+.+. +.++++.+|.. .+.+++|+|+|.++
T Consensus 174 ~-----~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~ 247 (356)
T 2w18_A 174 Q-----FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP 247 (356)
T ss_dssp E-----EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC-CEEEEEECCC---CCCEEEEEEETTEEEEEEC--
T ss_pred e-----ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC-cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccC
Confidence 3 46777777766665 46789999999999999999865 56778876543 57788999999886
Q ss_pred ------EEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccccc
Q 016974 266 ------GTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQ 339 (379)
Q Consensus 266 ------~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 339 (379)
++|+.|++|++||+.+++.+..+.-.....+...+.+.. .++.++++|+.|++|+|||+.+++...++
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~--~sg~~lASgS~DgTIkIWDl~tGk~l~tL---- 321 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD--VKDHCAAAILTSGTIAIWDLLLGQCTALL---- 321 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE--EETTEEEEEETTSCEEEEETTTCSEEEEE----
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc--cCCCEEEEEcCCCcEEEEECCCCcEEEEe----
Confidence 668899999999999998776543111112222333444 44889999999999999999999988887
Q ss_pred CCccCcee-EEEECCCCCeEEEeeCCCcEEEEec
Q 016974 340 NSHEGRIT-CLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 340 ~~h~~~v~-~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
.+|...+. +++|+|||++|+|||.|++||||++
T Consensus 322 ~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 322 PPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 56776555 6899999999999999999999986
No 104
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-34 Score=263.97 Aligned_cols=247 Identities=21% Similarity=0.357 Sum_probs=209.5
Q ss_pred ccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCC-
Q 016974 66 HAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDK- 144 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~- 144 (379)
|.+.|++++|+|++++|++|+.||.|++|| .+++....+..|...|.+++|+|++++|++++.|+.+++||+......
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 688999999999999999999999999999 678888889999999999999999999999999999999998753210
Q ss_pred ------CC------------------------------------------CcceeeeecccccceEEEEEecCCCceEEE
Q 016974 145 ------DG------------------------------------------NLPVSRMLSGHKGYVSCCQYVPDEDTHLIT 176 (379)
Q Consensus 145 ------~~------------------------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 176 (379)
.. .......+.+|...|.+++|+|++ .+|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~ 264 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN-KLLLS 264 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT-TEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC-CEEEE
Confidence 00 001123456788999999999975 58999
Q ss_pred eeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEE
Q 016974 177 SSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTV 256 (379)
Q Consensus 177 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v 256 (379)
++.|+.|++||+.++.....+ .+|...+.++.+++. + ++++++.|+.|++||++.. ..+..+..|...|.++
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~ 336 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCF-----YGHSQSIVSASWVGD-D-KVISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAG 336 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEE-----CCCSSCEEEEEEETT-T-EEEEEETTSEEEEEETTTT-EEEEEEECTTCCEEEE
T ss_pred EcCCCEEEEEECCCCccceEe-----cCCCccEEEEEECCC-C-EEEEEeCCCcEEEEECCCC-cEeEecccCCccEEEE
Confidence 999999999999987665555 468889999999984 4 8999999999999999865 5677888899999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEECCCCc--------------------eeEEEeeccCCCCCC--CeEEEEEccCCCEEEE
Q 016974 257 KFFPDGNRFGTGSDDGTCRLFDIRTGH--------------------QLQVYYQQHGENEIP--HVTSIAFSISGRLLFA 314 (379)
Q Consensus 257 ~~sp~g~~l~s~s~D~~i~iwd~~~~~--------------------~~~~~~~~~~~~~~~--~v~~~~fs~~g~~l~s 314 (379)
+|+|++++|++++.|+.|++||++++. .+..+.. +.. .|++++|+|+|++|++
T Consensus 337 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~ 411 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS-----SQDNDYIFDLSWNCAGNKISV 411 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC-----TTCCCCEEEEEECTTSSEEEE
T ss_pred EEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC-----cccCCceEEEEccCCCceEEE
Confidence 999999999999999999999998776 4444422 222 6999999999999999
Q ss_pred EEecCcEEEEeCC
Q 016974 315 GYSNGDCYVWDTL 327 (379)
Q Consensus 315 g~~dg~i~iwd~~ 327 (379)
|+.||.|++||+.
T Consensus 412 ~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 412 AYSLQEGSVVAIP 424 (425)
T ss_dssp EESSSCCEEEECC
T ss_pred EecCceEEEEeec
Confidence 9999999999964
No 105
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=254.91 Aligned_cols=259 Identities=16% Similarity=0.191 Sum_probs=217.8
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC-----C
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD-----S 131 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-----~ 131 (379)
.....++.+|.+.|++++|+|++++|++++.||+|++||+.+++....+. +...+.+++|+|+++++++++.+ +
T Consensus 64 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g 142 (369)
T 3zwl_B 64 GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPG 142 (369)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCC
T ss_pred chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCC
Confidence 34566888999999999999999999999999999999999999888887 67789999999999999999999 9
Q ss_pred cEEEEEcCCCCCCCC----Ccceeeeeccccc--ceEEEEEecCCCceEEEeeCCCeEEEeecCC-CeeEEEecCccccC
Q 016974 132 VCSIFNLNSPTDKDG----NLPVSRMLSGHKG--YVSCCQYVPDEDTHLITSSGDQTCVLWDITT-GLRTSVFGGEFQSG 204 (379)
Q Consensus 132 ~i~iw~~~~~~~~~~----~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~ 204 (379)
.+++|++........ .......+..|.+ .+.+++|+|++ ..|++++.|+.|++||+.+ +.....+ ..
T Consensus 143 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~ 216 (369)
T 3zwl_B 143 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSI-----DL 216 (369)
T ss_dssp EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEE-----EC
T ss_pred EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEE-----ec
Confidence 999999976432110 0012234456666 89999999975 5799999999999999998 5555544 56
Q ss_pred CccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCC------------
Q 016974 205 HTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDG------------ 272 (379)
Q Consensus 205 h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~------------ 272 (379)
|...+.++++++ ++++|++++.|+.|++||++.. ..+..+. +...+.+++|+|++.++++++.++
T Consensus 217 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 293 (369)
T 3zwl_B 217 HEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTL-QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEG 293 (369)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTC-CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC------------
T ss_pred CCCceeEEEECC-CCCEEEEecCCceEEEEECCCC-ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCC
Confidence 888999999997 6788999999999999999865 4555555 778999999999999999999988
Q ss_pred --eEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCce
Q 016974 273 --TCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAK 330 (379)
Q Consensus 273 --~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~ 330 (379)
.+++||+.+++.+..+.. +...|++++|+|+|++|++|+.||.|++|++..+.
T Consensus 294 ~~~i~~~d~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 294 KFEARFYHKIFEEEIGRVQG-----HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp -CEEEEEETTTCCEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred cceeEEEecCCCcchhheec-----ccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 899999999988776643 23469999999999999999999999999976543
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-34 Score=264.12 Aligned_cols=247 Identities=9% Similarity=0.077 Sum_probs=188.6
Q ss_pred eccccccccEEEEEeeCCCCeEEEE-----------cCCCcEEEEECCCCceee-E---e-----ecCCcceEEEEECCC
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSA-----------SQDGRLIVWNALTSQKTH-A---I-----KLPCAWVMTCAFSPT 120 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~-----------s~D~~v~iwd~~~~~~~~-~---~-----~~~~~~v~~~~~s~~ 120 (379)
.+|.+|.+.|.+++++. +.+++| +.|+++|+|++.+..... . . ..+...+.+++|+||
T Consensus 67 ~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 46889999999998764 455554 568899999976543221 1 1 123356889999999
Q ss_pred CCEEEE--eeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEec
Q 016974 121 GQSVAC--GGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG 198 (379)
Q Consensus 121 g~~l~~--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 198 (379)
|+++++ ++.|++|+|||+.+.. ....+ .|.+.|.+++|+|++ .++++++. +.+.+|+..++.......
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~-------~~~~~-~~~~~V~~v~fspdg-~~l~s~s~-~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLT-------EKFEI-ETRGEVKDLHFSTDG-KVVAYITG-SSLEVISTVTGSCIARKT 214 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTE-------EEEEE-ECSSCCCEEEECTTS-SEEEEECS-SCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCCEEEEeECCCCc-------EEEEe-CCCCceEEEEEccCC-ceEEeccc-eeEEEEEeccCcceeeee
Confidence 998764 5579999999987532 22333 477889999999986 57778775 456666666655443221
Q ss_pred CccccCCccCeEEEEEeCCCCcEEEEecCCC----cEEEEEccCCcc---ceEEEecccCCeeEEEEccCCCEEEEeeCC
Q 016974 199 GEFQSGHTADVLSVSISGSNSRMFVSGSCDS----TARLWDTRVASR---AVRTFHGHEGDVNTVKFFPDGNRFGTGSDD 271 (379)
Q Consensus 199 ~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~----~i~vwd~~~~~~---~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D 271 (379)
...|...+.+++|+| ++.++++++.|+ .+++|++..... ....+.+|...|++++|+|||++||+|+.|
T Consensus 215 ---~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 215 ---DFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp ---CCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred ---cCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence 246888899999997 677888888877 688898765432 234577899999999999999999999999
Q ss_pred CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 272 GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 272 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
++|+|||+++++.+..+... |...|++++|||||++||+|+.|++|+|||+.
T Consensus 291 ~~V~iwd~~~~~~~~~~~~g----H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQA----HSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCEEEEETTTTEEEEEETTS----SSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CEEEEEECCCCcEEEEecCc----ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999887765433 34579999999999999999999999999974
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.1e-33 Score=258.99 Aligned_cols=286 Identities=14% Similarity=0.143 Sum_probs=227.8
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeE-----eecCCcceEEEEECCCCCEEEEeeCCCcEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHA-----IKLPCAWVMTCAFSPTGQSVACGGLDSVCSI 135 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-----~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~i 135 (379)
..+..|. .+.+++|+|++.++++++.|++|++||..+++.... +..|...+.+++|+|+++++++++.|+.+++
T Consensus 117 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~ 195 (433)
T 3bws_A 117 SRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHV 195 (433)
T ss_dssp EEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEE
T ss_pred EEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEE
Confidence 3444443 456899999777888899999999999999887763 3467778999999999999999999999999
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
||+.... ....+..|...+.+++|+|++...+++++.|+.|++||+.++.....+. +...+.+++++
T Consensus 196 ~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~~~~~~~~ 262 (433)
T 3bws_A 196 FDLKTLA-------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD------KIGLPRGLLLS 262 (433)
T ss_dssp EETTTCC-------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC------CCSEEEEEEEC
T ss_pred EECCCce-------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec------CCCCceEEEEc
Confidence 9987432 3445667888999999999876555677789999999999887665542 23458889999
Q ss_pred CCCCcEEEEec--------CCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEE-EEeeCCCeEEEEECCCCceeE
Q 016974 216 GSNSRMFVSGS--------CDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRF-GTGSDDGTCRLFDIRTGHQLQ 286 (379)
Q Consensus 216 ~~~~~~l~sg~--------~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-~s~s~D~~i~iwd~~~~~~~~ 286 (379)
| +++++++++ .|+.|++||++.. +.... ..|...+.+++|+|+++++ ++++.|+.|++||+.+++.+.
T Consensus 263 ~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~-~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 263 K-DGKELYIAQFSASNQESGGGRLGIYSMDKE-KLIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp T-TSSEEEEEEEESCTTCSCCEEEEEEETTTT-EEEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred C-CCCEEEEEECCCCccccCCCeEEEEECCCC-cEEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 7 555666666 5889999999855 33433 3566789999999999755 666899999999999887765
Q ss_pred EEeeccCCCCCCCeEEEEEccCCCEEEEEEe---------------cCcEEEEeCCCceEEEecccccCCccCceeEEEE
Q 016974 287 VYYQQHGENEIPHVTSIAFSISGRLLFAGYS---------------NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGL 351 (379)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~---------------dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 351 (379)
.+.. ...+.+++|+|+|++|++++. ||.|++||..+++....+. . ...+.+++|
T Consensus 340 ~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----~-~~~~~~~~~ 408 (433)
T 3bws_A 340 SIPV------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----A-GNQPTGLDV 408 (433)
T ss_dssp EEEC------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----C-SSSEEEEEE
T ss_pred EecC------CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----C-CCCCceEEE
Confidence 5431 235889999999999998876 5799999998888776652 2 347899999
Q ss_pred CCCCCeEEEeeC-CCcEEEEecCc
Q 016974 352 SADGSALCTGSW-DTNLKIWAFGG 374 (379)
Q Consensus 352 s~d~~~l~s~s~-D~~i~vw~~~~ 374 (379)
+|||++|++++. |++|++|++.+
T Consensus 409 s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 409 SPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCEEEEEETTTTEEEEEEETT
T ss_pred cCCCCEEEEEECCCCeEEEEEecC
Confidence 999999998775 99999999875
No 108
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.8e-34 Score=257.01 Aligned_cols=255 Identities=19% Similarity=0.259 Sum_probs=202.2
Q ss_pred eEeecCCcceEEEEECCCCCEE-EEeeC---CCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC--CceEEE
Q 016974 103 HAIKLPCAWVMTCAFSPTGQSV-ACGGL---DSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE--DTHLIT 176 (379)
Q Consensus 103 ~~~~~~~~~v~~~~~s~~g~~l-~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s 176 (379)
+..+.|...|.+++|+|++..+ ++++. |+.+++|++.... . ......+|...|.+++|+|+. +.+|++
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~-----~-~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD-----L-KLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS-----E-EEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc-----c-cceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 3446788999999999999654 56665 9999999997532 1 122234789999999999974 478999
Q ss_pred eeCCCeEEEeecCCCe-eEEEecCccccCCccCeEEEEEeC-----CCCcEEEEecCCCcEEEEEccCCccceEEEeccc
Q 016974 177 SSGDQTCVLWDITTGL-RTSVFGGEFQSGHTADVLSVSISG-----SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHE 250 (379)
Q Consensus 177 ~~~d~~i~~wd~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~ 250 (379)
|+.|+.|++||+.++. ....+ .+|...|.++.+.+ +++++|++++.|+.|++||++.....+..+..|.
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSV-----KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEE-----CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred ecCCCeEEEEeCCCCCccEEEE-----EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 9999999999998875 44444 57899999997643 4677999999999999999987655677777665
Q ss_pred C----CeeEEE----EccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEcc---CCCEEEEEEecC
Q 016974 251 G----DVNTVK----FFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSI---SGRLLFAGYSNG 319 (379)
Q Consensus 251 ~----~v~~v~----~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~---~g~~l~sg~~dg 319 (379)
+ .|.+++ |+|++.+|++++.|+.|++||+++++..... . +...|.+++|+| ++++|++|+.||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~----~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--N----IKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--E----CSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--C----CCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 5 789998 7889999999999999999999988764332 1 234699999999 999999999999
Q ss_pred cEEEEeCCCceEEEecc-cccCCccCceeEEEECCCCC-eEEEeeCCCcEEEEecCc
Q 016974 320 DCYVWDTLLAKVVLNLG-SLQNSHEGRITCLGLSADGS-ALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 320 ~i~iwd~~~~~~~~~~~-~~~~~h~~~v~~~~~s~d~~-~l~s~s~D~~i~vw~~~~ 374 (379)
.|++||...++....+. .....|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 99999986654322110 01137899999999999998 899999999999999863
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-33 Score=245.80 Aligned_cols=248 Identities=19% Similarity=0.257 Sum_probs=207.7
Q ss_pred eEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCC---ceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTS---QKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCS 134 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~ 134 (379)
.....+.+|...|.+++|+|++++|++|+.|+.|++|++... +....+..|...+.+++| +++++++++.|+.++
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEE
Confidence 345677889999999999999999999999999999998654 456777888899999999 688999999999999
Q ss_pred EEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE
Q 016974 135 IFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI 214 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
+||.. .....+.+|...+.++.|.|.++..+++++.|+.|++||.. .....+. ..|...+.++.+
T Consensus 128 ~~d~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~----~~~~~~i~~~~~ 192 (313)
T 3odt_A 128 VWKEG---------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFS----GIHNDVVRHLAV 192 (313)
T ss_dssp EEETT---------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEEC----SSCSSCEEEEEE
T ss_pred EEcCC---------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEe----ccCcccEEEEEE
Confidence 99922 24456778999999999999556789999999999999943 3333331 348889999999
Q ss_pred eCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCC
Q 016974 215 SGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE 294 (379)
Q Consensus 215 ~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 294 (379)
++. +. +++++.|+.|++||++.. +.+..+.+|...|.+++|+|++ .|++++.|+.|++||+++++.+..+...
T Consensus 193 ~~~-~~-~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~--- 265 (313)
T 3odt_A 193 VDD-GH-FISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP--- 265 (313)
T ss_dssp EET-TE-EEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS---
T ss_pred cCC-Ce-EEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc---
Confidence 974 44 889999999999999865 6778889999999999999999 6999999999999999999887766432
Q ss_pred CCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEE
Q 016974 295 NEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVV 332 (379)
Q Consensus 295 ~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~ 332 (379)
...|.+++|+|+|+ +++++.||.|++||+..++..
T Consensus 266 --~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 266 --AISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp --SSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred --CceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 34699999999999 556999999999998776543
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.3e-34 Score=262.30 Aligned_cols=253 Identities=17% Similarity=0.256 Sum_probs=208.0
Q ss_pred eccccccccEEEEEeeC-CCCeEEEEcCCCcEEEEECCCC-------ceeeEeecCCcceEEEEECCCC-CEEEEeeCCC
Q 016974 61 RTLQGHAGKVYSLDWTS-ERNRIVSASQDGRLIVWNALTS-------QKTHAIKLPCAWVMTCAFSPTG-QSVACGGLDS 131 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~ 131 (379)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +....+..|...|.+++|+|++ .+|++++.|+
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 46789999999999999 8999999999999999999887 5677888999999999999998 6999999999
Q ss_pred cEEEEEcCCCCCCCCCcceeeee--cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccC-
Q 016974 132 VCSIFNLNSPTDKDGNLPVSRML--SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTAD- 208 (379)
Q Consensus 132 ~i~iw~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~- 208 (379)
.|++||+.... ....+ .+|.+.|.+++|+|++ ..|++++.|+.|++||++++.....+. .+|...
T Consensus 155 ~i~iwd~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~ 222 (402)
T 2aq5_A 155 VILVWDVGTGA-------AVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKD----RPHEGTR 222 (402)
T ss_dssp CEEEEETTTTE-------EEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEE----CSSCSSS
T ss_pred EEEEEECCCCC-------ccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeec----cCCCCCc
Confidence 99999997532 34456 7899999999999975 689999999999999999987665541 345554
Q ss_pred eEEEEEeCCCCcEEEEe---cCCCcEEEEEccCCccceEEEe-cccCCeeEEEEccCCCEEE-EeeCCCeEEEEECCCCc
Q 016974 209 VLSVSISGSNSRMFVSG---SCDSTARLWDTRVASRAVRTFH-GHEGDVNTVKFFPDGNRFG-TGSDDGTCRLFDIRTGH 283 (379)
Q Consensus 209 v~~~~~~~~~~~~l~sg---~~d~~i~vwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~l~-s~s~D~~i~iwd~~~~~ 283 (379)
+..+.|++ ++.++++| +.|+.|++||++.......... .|...|.+++|+|++++|+ +++.|+.|++||+.+++
T Consensus 223 ~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 223 PVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 78899997 67889998 8999999999987654343333 5778899999999999986 45579999999999887
Q ss_pred e-eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE
Q 016974 284 Q-LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV 331 (379)
Q Consensus 284 ~-~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~ 331 (379)
. +..+.. +. +...|.+++|+|++.++++ .++.+++|++.++..
T Consensus 302 ~~~~~l~~-~~--~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 302 PFLHYLSM-FS--SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TCEEEEEE-EC--CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred cceEeecc-cc--cCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 4 333322 21 2356899999999999875 466899999876543
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-34 Score=285.68 Aligned_cols=261 Identities=18% Similarity=0.244 Sum_probs=208.8
Q ss_pred eEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC-CceEEEeeCCC
Q 016974 103 HAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE-DTHLITSSGDQ 181 (379)
Q Consensus 103 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~ 181 (379)
..+.+|.+.|.+++|+|+|+++++++.|+.|++|++... .......+.+|.+.|.+++|+|+. +..|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-----~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-----CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 345788899999999999999999999999999998742 223556788999999999998863 46899999999
Q ss_pred eEEEeecCCCe--eEEEecCccccCCccCeEEEEEeCCC-CcEEEEecCCCcEEEEEccCCc-cceEEEecccCCeeEEE
Q 016974 182 TCVLWDITTGL--RTSVFGGEFQSGHTADVLSVSISGSN-SRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVNTVK 257 (379)
Q Consensus 182 ~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~~h~~~v~~v~ 257 (379)
+|++||+.++. ....+ .+|...|.++.++|.. +.++++|+.||.|++||++... .....+.+|...|.+++
T Consensus 78 ~I~vwd~~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~ 152 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 152 (753)
T ss_dssp CEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEE
T ss_pred eEEEEECCCCcccccccc-----cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEE
Confidence 99999999875 33333 5788999999999842 7899999999999999998652 23456778999999999
Q ss_pred Ecc-------------CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccC---CCEEEEEEecCcE
Q 016974 258 FFP-------------DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSIS---GRLLFAGYSNGDC 321 (379)
Q Consensus 258 ~sp-------------~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~---g~~l~sg~~dg~i 321 (379)
|+| ++.+|++|+.||+|++||++++......... ...+...|++++|+|+ |++|++|+.||.|
T Consensus 153 ~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp ECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred ecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee-ecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 999 5899999999999999999887532211111 1223457999999999 8999999999999
Q ss_pred EEEeCCCceEEEe-cccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 322 YVWDTLLAKVVLN-LGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 322 ~iwd~~~~~~~~~-~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++||...+..... .......|...|++++|+|+|++|++|+.||.|++|++..
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999876531111 1111245888999999999999999999999999999873
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=272.05 Aligned_cols=254 Identities=10% Similarity=0.112 Sum_probs=200.5
Q ss_pred cccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCc-----ceEEEEECCCCCEEEEeeCCCcEEEEEcC
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCA-----WVMTCAFSPTGQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l~~~~~d~~i~iw~~~ 139 (379)
+|...|.+++|+|+|++||+++.||+|++||... .+..+. |.. .+.+++|||+|++|++|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5788899999999999999999999999999543 555556 554 49999999999999999999999999997
Q ss_pred CCCCCCCCcceeeee----cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeE---EEecCccccCCccCeEEE
Q 016974 140 SPTDKDGNLPVSRML----SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRT---SVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~---~~~~~~~~~~h~~~v~~~ 212 (379)
.........-...++ .+|.+.|.+++|+|++ +++++.|++|++||+..+... ..+ ..+|...|.++
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL----~~~h~~~V~sv 232 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMI----QNASRRKITDL 232 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEE----ECCCSSCCCCE
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeee----cccccCcEEEE
Confidence 632100000123444 6788999999999975 889999999999999876521 122 13678899999
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEE--ccCCCEEEEeeCCCeEEEEECCCCceeEEEee
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKF--FPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQ 290 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~--sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 290 (379)
+|+ ++.+++++ ++.|++||+... .......+|...|..++| +|++..|++++.||+ ++|...
T Consensus 233 aFs---g~~LASa~-~~tIkLWd~~~~-~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------- 296 (588)
T 2j04_A 233 KIV---DYKVVLTC-PGYVHKIDLKNY-SISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------- 296 (588)
T ss_dssp EEE---TTEEEEEC-SSEEEEEETTTT-EEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS----------
T ss_pred EEE---CCEEEEEe-CCeEEEEECCCC-eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------
Confidence 998 36788887 699999998854 332223389999999999 999999999999999 999965
Q ss_pred ccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeC
Q 016974 291 QHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSW 363 (379)
Q Consensus 291 ~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~ 363 (379)
.++|+|+++.+++. |+++++|+..... ...+ .+...|++++|||||+.+|+++.
T Consensus 297 -----------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~-----~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 -----------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNY-----ETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp -----------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSS-----CCEEEEEEEEECTTSSEEEEEEE
T ss_pred -----------cEEECCCceEEEEc--CCEEEEEECCCCc-eeee-----ccceEEEEEEECCCCCEEEEEEe
Confidence 14589999988774 9999999864433 1111 23667999999999999998864
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.2e-33 Score=246.66 Aligned_cols=250 Identities=16% Similarity=0.245 Sum_probs=204.9
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 141 (379)
.+.+|...|++++|+|++++|+||+.||+|++||+.+++.+..+..|...+.++ ++++..+++++.++.+++|+....
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCC
Confidence 456788999999999999999999999999999999999999999988776654 556789999999999999997643
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
. .....+.+|...+..+.+.+++ ..|++++.|++|++||+.++...... ......|...+.++.+.+....+
T Consensus 140 ~------~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 140 E------HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVP-LQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp S------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCC-SEEECCCCSCEEEEEECTTSTTE
T ss_pred c------eeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccc-eeeecccCCceEEEEecCCCCcE
Confidence 2 2445678999999999999875 68999999999999999876422111 01124577789999998876665
Q ss_pred E--EEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee--CCCeEEEEECCCCceeEEEeeccCCCCC
Q 016974 222 F--VSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS--DDGTCRLFDIRTGHQLQVYYQQHGENEI 297 (379)
Q Consensus 222 l--~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 297 (379)
+ ++++.++.|++||.+... .. ....+...+..+.|+|++..+++++ .|+.|++||+++++.+..+.. |.
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g-----H~ 284 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGA-CL-SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-----HT 284 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCC-EE-EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-----CS
T ss_pred EEEEecCCCCEEEEEeccccc-cc-ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC-----CC
Confidence 5 467889999999987553 23 3345778899999999999887664 799999999999998877642 34
Q ss_pred CCeEEEEEccCCCEEEEEEecCcEEEEeCCC
Q 016974 298 PHVTSIAFSISGRLLFAGYSNGDCYVWDTLL 328 (379)
Q Consensus 298 ~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~ 328 (379)
..|++++|+|+|++|++|+.||+|+|||+..
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 5799999999999999999999999999754
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.5e-33 Score=262.18 Aligned_cols=246 Identities=26% Similarity=0.522 Sum_probs=205.4
Q ss_pred eeEeeccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 57 LVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 57 ~~~~~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
..+..++.+|.+.|.+++| ++++|++|+.||+|++||+.+++....+..|...|.+++|+ +.++++++.|+.+++|
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vw 238 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 238 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEE
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEE
Confidence 3456678899999999999 78899999999999999999999999999999999999997 4599999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 216 (379)
|+.... .......+.+|...|.++.|. +..+++|+.|++|++||+.++.....+ .+|...+.++.++
T Consensus 239 d~~~~~----~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~- 305 (435)
T 1p22_A 239 DMASPT----DITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTL-----NGHKRGIACLQYR- 305 (435)
T ss_dssp ECSSSS----CCEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEEE-
T ss_pred eCCCCC----CceeeeEecCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEE-----cCCCCcEEEEEeC-
Confidence 997533 122335678999999999993 368999999999999999998777666 5788899999885
Q ss_pred CCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc---------eeEE
Q 016974 217 SNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH---------QLQV 287 (379)
Q Consensus 217 ~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~---------~~~~ 287 (379)
+.++++|+.||.|++||++.. ..+..+.+|...|.+++| ++.+|++|+.||.|++||++++. .+..
T Consensus 306 --~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 380 (435)
T 1p22_A 306 --DRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 380 (435)
T ss_dssp --TTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEE
T ss_pred --CCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheee
Confidence 368999999999999999865 567889999999999998 78899999999999999987654 4444
Q ss_pred EeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE
Q 016974 288 YYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV 331 (379)
Q Consensus 288 ~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~ 331 (379)
+. .+...|.+++| ++++|++|+.||.|++||+.....
T Consensus 381 ~~-----~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 381 LV-----EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp EC-----CCSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred cc-----CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 32 23446889998 788999999999999999876543
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3e-33 Score=252.57 Aligned_cols=250 Identities=9% Similarity=0.092 Sum_probs=198.7
Q ss_pred ecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCc-eEEEeeCCCeEE
Q 016974 106 KLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDT-HLITSSGDQTCV 184 (379)
Q Consensus 106 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~d~~i~ 184 (379)
..|...|.+++|+|++++|++++.|+.+++|++..... ......+.+|...|.+++|+|++ . .|++|+.|+.|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc----cccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEE
Confidence 46778899999999999999999999999999975321 11234456899999999999974 6 799999999999
Q ss_pred Eeec-CCCeeEEEecCccccC--CccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCC--------ccceEEEecccCCe
Q 016974 185 LWDI-TTGLRTSVFGGEFQSG--HTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVA--------SRAVRTFHGHEGDV 253 (379)
Q Consensus 185 ~wd~-~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v 253 (379)
+||+ .++.. ..+ .+ |...|.++.+++ +.++++++.|+.|++||++.. .+.+..+. |...|
T Consensus 83 ~wd~~~~~~~-~~~-----~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v 153 (342)
T 1yfq_A 83 KVDLIGSPSF-QAL-----TNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKI 153 (342)
T ss_dssp EECSSSSSSE-EEC-----BSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCE
T ss_pred EEEeccCCce-Eec-----cccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCce
Confidence 9999 87754 222 45 889999999998 678999999999999998751 23333444 88899
Q ss_pred eEEEEccCCCEEEEeeCCCeEEEEECCC-CceeEEEeeccCCCCCCCeEEEEEcc-CCCEEEEEEecCcEEEEeCCCc--
Q 016974 254 NTVKFFPDGNRFGTGSDDGTCRLFDIRT-GHQLQVYYQQHGENEIPHVTSIAFSI-SGRLLFAGYSNGDCYVWDTLLA-- 329 (379)
Q Consensus 254 ~~v~~sp~g~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~fs~-~g~~l~sg~~dg~i~iwd~~~~-- 329 (379)
.+++|+|++ +++++.|+.|++||+++ +........ ..+...+.+++|+| +++++++|+.||.|++|+....
T Consensus 154 ~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 154 FTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEE---SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp EEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEE---CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred EEEEecCCc--EEEEeCCCeEEEEECCccccccceeee---cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 999999987 99999999999999987 543211111 11234699999999 9999999999999999998665
Q ss_pred ----eEEEecccccC-----CccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 330 ----KVVLNLGSLQN-----SHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 330 ----~~~~~~~~~~~-----~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+....+..... .|...|.+++|+|++++|++++.||+|++|++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 33333311100 2345999999999999999999999999999875
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.1e-31 Score=245.26 Aligned_cols=267 Identities=15% Similarity=0.176 Sum_probs=213.6
Q ss_pred CeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEE-EEeeCCCcEEEEEcCCCCCCCCCcceeeeecccc
Q 016974 80 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHK 158 (379)
Q Consensus 80 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~ 158 (379)
..+++++.|++|++||+.+++....+..+. .+.+++|+|+|+++ ++++.|+.+++||+.+.. ....+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-------~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-------VIATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-------EEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe-------EEEEEECCC
Confidence 367899999999999999999888887765 48999999999977 677799999999986432 333444443
Q ss_pred cceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccC
Q 016974 159 GYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRV 238 (379)
Q Consensus 159 ~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~ 238 (379)
.+.+++|+|++...+++++.++.|++||+.++.....+. +...+.++++++.+..++++++.|+.|++||+..
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred -CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe------CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 899999999876555677788999999999987665542 3346889999985554558899999999999975
Q ss_pred CccceEEEecccCCeeEEEEccCCCEE-EEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-
Q 016974 239 ASRAVRTFHGHEGDVNTVKFFPDGNRF-GTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY- 316 (379)
Q Consensus 239 ~~~~~~~~~~h~~~v~~v~~sp~g~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~- 316 (379)
. +.+..+..| ..+.+++|+|+|+++ ++++.|+.|++||+++++.+..+.. ...+.+++|+|+|++|++++
T Consensus 148 ~-~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 148 K-AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV------EAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp T-EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------SSEEEEEEECTTSSEEEEEEE
T ss_pred C-cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec------CCCccceEECCCCCEEEEEec
Confidence 5 455666654 467999999999887 6778899999999998876655432 23588999999999999988
Q ss_pred --ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeE-EEeeCCCcEEEEecCc
Q 016974 317 --SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSAL-CTGSWDTNLKIWAFGG 374 (379)
Q Consensus 317 --~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-~s~s~D~~i~vw~~~~ 374 (379)
.++.|++||..+++.+..+ ..|. .+.+++|+|||++| ++++.|++|++|++..
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~----~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARI----PVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEE----ECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CcCCCcEEEEECCCCeEEEEE----ecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 6899999999888776655 2343 47899999999987 6778999999999875
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=251.35 Aligned_cols=290 Identities=19% Similarity=0.262 Sum_probs=197.1
Q ss_pred ccccccEEEEEeeC-CCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCC---CCEEEEeeCCCcEEEEEcC
Q 016974 64 QGHAGKVYSLDWTS-ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPT---GQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 64 ~gH~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~d~~i~iw~~~ 139 (379)
.+|...|.+++|+| ++++|++++.||.|++||+.+++....+. +...+.+++|+|. +.++++++.|+.+++||+.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 36999999999999 77899999999999999999988877776 4566889999885 4599999999999999997
Q ss_pred CCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCe-eEEEecC----------ccccCCccC
Q 016974 140 SPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGL-RTSVFGG----------EFQSGHTAD 208 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~----------~~~~~h~~~ 208 (379)
... ....+.+|.+.|.+++|+|++...|++++.|+.|++||++++. ....+.. ....+|...
T Consensus 175 ~~~-------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 175 SGS-------CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp SSC-------CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred Ccc-------eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 532 3456778999999999999876679999999999999998653 2222110 111468889
Q ss_pred eEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecc-----cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc
Q 016974 209 VLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGH-----EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH 283 (379)
Q Consensus 209 v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h-----~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~ 283 (379)
|.+++++| +++++++++.|+.|++||++.... ...+.++ ...+........+..+++++.|+.|++||+.+++
T Consensus 248 v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 325 (408)
T 4a11_B 248 VNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGEN-TLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE 325 (408)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTCCB-CCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC
T ss_pred eeEEEEcC-CCCEEEEecCCCeEEEEECCCCcc-ceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc
Confidence 99999997 678999999999999999986533 2111111 1112222223345567778889999999999998
Q ss_pred eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECC-CCCeEEEee
Q 016974 284 QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSA-DGSALCTGS 362 (379)
Q Consensus 284 ~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~-d~~~l~s~s 362 (379)
.+..+.. +...|++++|+|+|++|++|+.||.|++||+.+.+.+.... .+. ....+++ +...+.+.+
T Consensus 326 ~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~ 393 (408)
T 4a11_B 326 QITMLKG-----HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD----ETT---TKSQLNPAFEDAWSSSD 393 (408)
T ss_dssp EEEEECC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------------
T ss_pred ceeeecc-----CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC----ceE---eccccccccceeecccC
Confidence 8776632 34569999999999999999999999999998876554321 111 1122333 344556788
Q ss_pred CCCcEEEEecCce
Q 016974 363 WDTNLKIWAFGGY 375 (379)
Q Consensus 363 ~D~~i~vw~~~~~ 375 (379)
.|+.+++|+.-.+
T Consensus 394 ~~~~~~~W~~~~~ 406 (408)
T 4a11_B 394 EEGGTSAWSHPQF 406 (408)
T ss_dssp -------------
T ss_pred ccCceeecCCccc
Confidence 8999999986553
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-33 Score=260.29 Aligned_cols=247 Identities=13% Similarity=0.049 Sum_probs=173.2
Q ss_pred ccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceee-----EeecCCcceEEEEECC--------CCCEEEEeeCCCc
Q 016974 66 HAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTH-----AIKLPCAWVMTCAFSP--------TGQSVACGGLDSV 132 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~-----~~~~~~~~v~~~~~s~--------~g~~l~~~~~d~~ 132 (379)
|...+....+.+++.+|++|+.|++|+|||..+++... .+.+|...|.+++|+| +|++||++|.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 44444444555667789999999999999998876543 3567899999999998 8899999999999
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC-------------
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG------------- 199 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~------------- 199 (379)
|+|||+.... ....+.+|...|.+++|+|++..+|++++.|++|++||++++........
T Consensus 168 v~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 168 LIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp EEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred EEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 9999986432 33456678899999999998767899999999999999987643322110
Q ss_pred -------ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEE----------------
Q 016974 200 -------EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTV---------------- 256 (379)
Q Consensus 200 -------~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v---------------- 256 (379)
....+|...+.++.+.+.+++.+++++.|+.+++||+... +....+..|...+..+
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN-NDYNEISDSTMKLGPKNLLPNVQGISLFPSLL 319 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSS
T ss_pred cccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC-CCCceEeeecCccccEEEccccccccccCcce
Confidence 0124677889999998778899999999999999998754 2333344444433333
Q ss_pred --EEcc--CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeC
Q 016974 257 --KFFP--DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 257 --~~sp--~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~ 326 (379)
.|+| ++.++++|+.|++|++||+.+++.+...... ..+|.+++|+|||++||+++.+| +.+|.+
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~-----~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL-----GMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC-----SSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC-----CCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 3333 3446788899999999999998877655432 23699999999999999998766 666653
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.2e-31 Score=244.05 Aligned_cols=249 Identities=12% Similarity=0.096 Sum_probs=177.3
Q ss_pred EEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCc
Q 016974 93 VWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDT 172 (379)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 172 (379)
||++.+.+.+.....|...|.+++|+|+|++|++|+.|+ ++||++.+.. . ....+...+..+.+.++.+.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~ 72 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA-------H--IMSQEMRHLSKVRMLHRTNY 72 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE-------E--EEEEECSCCCEEEECTTSSE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc-------e--eeeeecCCeEEEEEcCCCCE
Confidence 456666666777788889999999999999999998775 7899986421 1 11122224667788887655
Q ss_pred eEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCC
Q 016974 173 HLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGD 252 (379)
Q Consensus 173 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~ 252 (379)
.+++++.|++|++||+.++.....+ .+...|.++.+++. .++.+ .|+.|++||+....+.+..+.. +
T Consensus 73 ~~~~~~~d~~v~iWd~~~~~~~~~~------~~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~ 139 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDDVKKQDVSRI------KVDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR---F 139 (355)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEE------ECSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE---E
T ss_pred EEEEECCccEEEEEECCCCcEEEEE------ECCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc---C
Confidence 5578899999999999998877655 25568999998752 33333 4789999999865233333333 3
Q ss_pred eeEEEEccCCCEEEE--eeCCCeEEEEECCCCce----------------eEEEeeccCCCCCCCeEEEEEccCCCEEEE
Q 016974 253 VNTVKFFPDGNRFGT--GSDDGTCRLFDIRTGHQ----------------LQVYYQQHGENEIPHVTSIAFSISGRLLFA 314 (379)
Q Consensus 253 v~~v~~sp~g~~l~s--~s~D~~i~iwd~~~~~~----------------~~~~~~~~~~~~~~~v~~~~fs~~g~~l~s 314 (379)
...++++| .+++. |+.||.|++||++++.. +..+ ..+...|++++|+|+|++|++
T Consensus 140 ~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 140 GGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-----KAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp EEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE-----CCCSSCEEEEEECTTSSEEEE
T ss_pred CceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE-----EccCCceEEEEECCCCCEEEE
Confidence 44566777 56665 68999999999987651 2222 224557999999999999999
Q ss_pred EEecCc-EEEEeCCCceEEEecccccCC-ccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 315 GYSNGD-CYVWDTLLAKVVLNLGSLQNS-HEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 315 g~~dg~-i~iwd~~~~~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
|+.||+ |++||+.+++.+..+. .+ |...|++++|+|||++|++++.|++|+||++..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~---~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFR---RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEE---CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EeCCCCEEEEEECCCCcEEEEEE---cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 999999 9999999888777662 24 899999999999999999999999999999864
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.7e-30 Score=236.22 Aligned_cols=289 Identities=15% Similarity=0.162 Sum_probs=218.4
Q ss_pred eEeeccccccccEEEEEeeCCCCeE-EEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEE-eeCCCcEEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTSERNRI-VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVAC-GGLDSVCSI 135 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~d~~i~i 135 (379)
.+...+.+|.. +.+++|+|++++| ++++.|++|++||..+++....+..+. .+.+++|+|+|++|+. ++.|+.|++
T Consensus 23 ~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 23 KVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 44556676754 8999999999976 788899999999999999888887765 7999999999998754 556799999
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
||+.... ....+..| ..+.+++|+|++..++++++.|+.|++||+.++.....+. . ...+..+.++
T Consensus 101 ~d~~~~~-------~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-----~-~~~~~~~~~~ 166 (391)
T 1l0q_A 101 IDTTSNT-------VAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-----V-GRSPKGIAVT 166 (391)
T ss_dssp EETTTTE-------EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----C-CSSEEEEEEC
T ss_pred EECCCCe-------EEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe-----c-CCCcceEEEC
Confidence 9987532 23333333 4678999999875555889999999999999887666552 2 2456889999
Q ss_pred CCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee---CCCeEEEEECCCCceeEEEeecc
Q 016974 216 GSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS---DDGTCRLFDIRTGHQLQVYYQQH 292 (379)
Q Consensus 216 ~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s---~D~~i~iwd~~~~~~~~~~~~~~ 292 (379)
+.+..++++++.|+.|++||++.. +....+. +...+.+++|+|+|++|++++ .|+.|++||+++++.+..+.. +
T Consensus 167 ~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~ 243 (391)
T 1l0q_A 167 PDGTKVYVANFDSMSISVIDTVTN-SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-G 243 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTT-EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-C
T ss_pred CCCCEEEEEeCCCCEEEEEECCCC-eEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec-C
Confidence 855555578899999999999865 4444444 566899999999999998888 689999999998877665533 1
Q ss_pred CCCCCCCeEEEEEccCCCEE-EEEEecCcEEEEeCCCceEEEecccccCCccCce---eEEE------------ECCCC-
Q 016974 293 GENEIPHVTSIAFSISGRLL-FAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRI---TCLG------------LSADG- 355 (379)
Q Consensus 293 ~~~~~~~v~~~~fs~~g~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v---~~~~------------~s~d~- 355 (379)
..+.+++|+|+|++| ++++.|+.|++||+.+++....+.. |..+. ..+. |+.+.
T Consensus 244 -----~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~ 314 (391)
T 1l0q_A 244 -----PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV----GKNPYASGQFIGSIPVQPVYPSADFKSNIT 314 (391)
T ss_dssp -----SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----SSSEECCSSCEEECSSCCCCCBCCEEESCC
T ss_pred -----CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC----CcCCCccceeeecccccccccccccccccc
Confidence 137899999999988 5667899999999998887665521 22111 0112 22111
Q ss_pred ---------CeEEEeeCCCcEEEEecCc
Q 016974 356 ---------SALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 356 ---------~~l~s~s~D~~i~vw~~~~ 374 (379)
-.+.+.+.|.++++|+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 342 (391)
T 1l0q_A 315 SGYIFLSEPVQFTDLSKDATEWKWDFGD 342 (391)
T ss_dssp SSEEETTCCEEEEECCBSCSEEEEECSS
T ss_pred cccccccceEEEEeCCCCceEEEEECCC
Confidence 2366778899999999865
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=237.66 Aligned_cols=257 Identities=15% Similarity=0.198 Sum_probs=202.3
Q ss_pred EECCCCceeeEeecCCcceEEEEECCC---CCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCC
Q 016974 94 WNALTSQKTHAIKLPCAWVMTCAFSPT---GQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDE 170 (379)
Q Consensus 94 wd~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 170 (379)
|+....+....+..|...|.+++|+|+ |++|++++.|+.|++||+.... ......+.+|.+.|.+++|+|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-----QTIPKAQQMHTGPVLDVCWSDDG 98 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-----CEEEEEEEECSSCEEEEEECTTS
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-----ceeEEEeccccCCEEEEEECcCC
Confidence 345556667778889999999999999 6999999999999999997521 22346678899999999999965
Q ss_pred CceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE--eCCCCcEEEEecCCCcEEEEEccCCccceEEEec
Q 016974 171 DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI--SGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG 248 (379)
Q Consensus 171 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~ 248 (379)
.+|++++.|++|++||+.++..... ..|...|.++.| ++ ++.+|++++.|+.|++||++.. +.+..+..
T Consensus 99 -~~l~s~~~dg~v~iwd~~~~~~~~~------~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 169 (368)
T 3mmy_A 99 -SKVFTASCDKTAKMWDLSSNQAIQI------AQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSS-NPMMVLQL 169 (368)
T ss_dssp -SEEEEEETTSEEEEEETTTTEEEEE------EECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCS-SCSEEEEC
T ss_pred -CEEEEEcCCCcEEEEEcCCCCceee------ccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCC-cEEEEEec
Confidence 6899999999999999998876553 358899999999 54 6788999999999999999865 45666766
Q ss_pred ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCE----EEEEEecCcEEEE
Q 016974 249 HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRL----LFAGYSNGDCYVW 324 (379)
Q Consensus 249 h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~----l~sg~~dg~i~iw 324 (379)
|. .+.++.+. +..+++++.|+.+++||++.......... ......+.++++.+++.. +++|+.||.|++|
T Consensus 170 ~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 170 PE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIE---SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp SS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECC---CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred CC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhcc---ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 54 56666665 45888999999999999987654332221 112234667777766655 9999999999999
Q ss_pred eCCCce---EEEecccccCCccC------------ceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 325 DTLLAK---VVLNLGSLQNSHEG------------RITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 325 d~~~~~---~~~~~~~~~~~h~~------------~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
|..... ....+ ..|.. +|++++|+|++++|++|+.||+|++|++..
T Consensus 244 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 244 YINPPNPAKDNFTF----KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp ESSCSCHHHHSEEE----ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ecCCCCccccceee----eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 987652 22222 23433 799999999999999999999999999876
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-31 Score=243.28 Aligned_cols=234 Identities=11% Similarity=0.098 Sum_probs=176.3
Q ss_pred ECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCC-----
Q 016974 117 FSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG----- 191 (379)
Q Consensus 117 ~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~----- 191 (379)
+.+++.++++|+.|+.|++||+.... ....+. ...|.++.|+|. +++++.|++|++|+....
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~-------~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSK-------TITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSS-------CEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCc-------EEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEee
Confidence 45678899999999999999997532 112222 355666777774 999999999999987642
Q ss_pred ----eeEEEecCccccCCccCeEEEEEeCC-CCcEEEEecCCCcEEEEEccCCccceEEE-ecccCCeeEEEEccCCCEE
Q 016974 192 ----LRTSVFGGEFQSGHTADVLSVSISGS-NSRMFVSGSCDSTARLWDTRVASRAVRTF-HGHEGDVNTVKFFPDGNRF 265 (379)
Q Consensus 192 ----~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~i~vwd~~~~~~~~~~~-~~h~~~v~~v~~sp~g~~l 265 (379)
.....+ ..+|...|.+++++|. +++++++|+.|+.|++||++... ..... ..|...|.+++|+|+|.+|
T Consensus 111 ~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~~i~~~~~~pdg~~l 185 (343)
T 3lrv_A 111 SKTNKVLREI----EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-QYIVHSAKSDVEYSSGVLHKDSLLL 185 (343)
T ss_dssp TTTCCEEEEE----ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-EEEEECCCSSCCCCEEEECTTSCEE
T ss_pred cCCcceeEEe----ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-EEEEEecCCCCceEEEEECCCCCEE
Confidence 212221 2356788999999971 56789999999999999998664 34444 3455689999999999999
Q ss_pred EEeeCCCeEEEEECCCCcee-EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccC
Q 016974 266 GTGSDDGTCRLFDIRTGHQL-QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEG 344 (379)
Q Consensus 266 ~s~s~D~~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~ 344 (379)
++|+.|+.|++||+++++.+ ..+.. .+...|++++|+|+|++|++|+ |+.|++||+...+....+..+ ..|..
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~----~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~-~~~~~ 259 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPV----DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTY-TIPEF 259 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCC----CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCC-BC---
T ss_pred EEEcCCCEEEEEECCCCCCCccEEec----cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccc-ccccc
Confidence 99999999999999998876 44422 1345799999999999999999 559999999877654433221 12334
Q ss_pred cee--EEEECCCCCeEEEeeC-CCcEEEEecCc
Q 016974 345 RIT--CLGLSADGSALCTGSW-DTNLKIWAFGG 374 (379)
Q Consensus 345 ~v~--~~~~s~d~~~l~s~s~-D~~i~vw~~~~ 374 (379)
.+. +++|+|+|++|++++. |+.|+||++..
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 444 6999999999999999 99999999854
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-30 Score=241.62 Aligned_cols=250 Identities=14% Similarity=0.089 Sum_probs=196.7
Q ss_pred ccccccccEEEEEeeCCCCeE-EEEcCCCcEEEEECC--CCceeeEee--cCCcceEEEEECCCCCEEEEeeCCCcEEEE
Q 016974 62 TLQGHAGKVYSLDWTSERNRI-VSASQDGRLIVWNAL--TSQKTHAIK--LPCAWVMTCAFSPTGQSVACGGLDSVCSIF 136 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~--~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw 136 (379)
.+.+|.+.|++++|+|++++| ++|+.||+|++||+. +++....+. .+...+.+++|+|+|++|++++.|+.+.+|
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 356789999999999999996 999999999999998 888887776 556789999999999999999999999999
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecC--CCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPD--EDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI 214 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
++....... .....+.+|...|.+++|+|+ ++.+|++|+.|++|++||+.++.....+ ..+|...|.+++|
T Consensus 177 ~~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~h~~~v~~~~~ 249 (450)
T 2vdu_B 177 DINSIPEEK---FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW----LFGHKHFVSSICC 249 (450)
T ss_dssp ETTSCCCSS---CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE----CCCCSSCEEEEEE
T ss_pred ecCCccccc---ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee----ecCCCCceEEEEE
Confidence 987543110 022356789999999999997 2468999999999999999987665443 2578999999999
Q ss_pred eCCCCcEEEEecCCCcEEEEEccCCccceEEEec-------------------------ccCCeeEEEEccCCCEEEEee
Q 016974 215 SGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG-------------------------HEGDVNTVKFFPDGNRFGTGS 269 (379)
Q Consensus 215 ~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~-------------------------h~~~v~~v~~sp~g~~l~s~s 269 (379)
+ ++++|++|+.|+.|++||++.. +.+..+.. +...|.+++|+|++++|++++
T Consensus 250 s--d~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 250 G--KDYLLLSAGGDDKIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp C--STTEEEEEESSSEEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred C--CCCEEEEEeCCCeEEEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 8 7789999999999999999865 44555542 235689999999999999999
Q ss_pred -CCCeEEEEEC--CCC---ceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEe------cCcEEEEeCC
Q 016974 270 -DDGTCRLFDI--RTG---HQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYS------NGDCYVWDTL 327 (379)
Q Consensus 270 -~D~~i~iwd~--~~~---~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~------dg~i~iwd~~ 327 (379)
.|+.|++||+ .++ ..+..+.. + ..|.+++|+|++.++++++. +..|.+|...
T Consensus 327 ~~d~~i~iw~~~~~~~~~l~~~~~~~~-----~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 327 EATKCIIILEMSEKQKGDLALKQIITF-----P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp TTCSEEEEEEECSSSTTCEEEEEEEEC-----S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCCCeEEEEEeccCCCCceeeccEecc-----C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8999999999 555 33333321 1 46999999996544444443 4457888643
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=8.8e-30 Score=223.90 Aligned_cols=192 Identities=15% Similarity=0.158 Sum_probs=138.3
Q ss_pred CCCCEEEEee--CCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEec--CCCceEEEeeCCCeEEEeecCCCeeE
Q 016974 119 PTGQSVACGG--LDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVP--DEDTHLITSSGDQTCVLWDITTGLRT 194 (379)
Q Consensus 119 ~~g~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~~wd~~~~~~~ 194 (379)
++|+.+.+++ .|+.|++|++.+. ++ ....+.+|...++.++|+| .+...|++++.|++|++||+.++..+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~d----G~--~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l 216 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAED----GG--GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL 216 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTT----SC--EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCcEEEecccCCCCcEEEEEECCC----Cc--eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE
Confidence 4566666633 5888888888542 22 3345667888888888887 23468999999999999999999888
Q ss_pred EEecCccccCCccCeEEEEEeCCCCcEE------------EEecCCCcEEEEEccCCccceEEE-----ecccCCeeEEE
Q 016974 195 SVFGGEFQSGHTADVLSVSISGSNSRMF------------VSGSCDSTARLWDTRVASRAVRTF-----HGHEGDVNTVK 257 (379)
Q Consensus 195 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l------------~sg~~d~~i~vwd~~~~~~~~~~~-----~~h~~~v~~v~ 257 (379)
..+... ..+...+.+++|+| ++.++ ++|+.|++|++||..+. +.+..+ .+|...+.+..
T Consensus 217 ~tL~g~--~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg-k~l~v~~~~~p~Gh~~~~lsg~ 292 (356)
T 2w18_A 217 KKMHID--DSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT-LSVGVMLYCLPPGQAGRFLEGD 292 (356)
T ss_dssp EEEECC--C---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTT-EEEEEEEECCCTTCCCCEEEEE
T ss_pred EEEcCC--CcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCC-EEEEEEEeeccCCCcceeEccc
Confidence 777321 11234677778887 55554 67889999999998755 444443 36766654444
Q ss_pred EccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeC
Q 016974 258 FFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 258 ~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~ 326 (379)
+ ++.++|+++.|++|+|||+.+++.+..+..+. ...+.+++|||||++|++|+.|++|+|||.
T Consensus 293 ~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~----~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 293 V--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVS----DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp E--ETTEEEEEETTSCEEEEETTTCSEEEEECCC------CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred c--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCC----CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4 48899999999999999999999888764211 123456899999999999999999999984
No 125
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.6e-29 Score=227.67 Aligned_cols=226 Identities=20% Similarity=0.337 Sum_probs=184.2
Q ss_pred eEeeccccccccEEEEEeeC--CCCeEEEEcCCCcEEEEECCCC---------ceeeEeecCCcceEEEEECCC--CCEE
Q 016974 58 VCCRTLQGHAGKVYSLDWTS--ERNRIVSASQDGRLIVWNALTS---------QKTHAIKLPCAWVMTCAFSPT--GQSV 124 (379)
Q Consensus 58 ~~~~~l~gH~~~v~~~~~~~--~~~~l~s~s~D~~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~s~~--g~~l 124 (379)
....++.+|...|++++|+| ++++|++|+.||+|++||+.++ +....+..|...+.+++|+|+ +.++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 45567889999999999999 5899999999999999999877 446777788899999999999 9999
Q ss_pred EEeeCCCcEEEEEcCCCCCCCCCcce-------eeeecccccceEEEEEecC--CCceEEEeeCCCeEEEeecCCCeeEE
Q 016974 125 ACGGLDSVCSIFNLNSPTDKDGNLPV-------SRMLSGHKGYVSCCQYVPD--EDTHLITSSGDQTCVLWDITTGLRTS 195 (379)
Q Consensus 125 ~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~ 195 (379)
++++.|+.+++||+....... .... .....+|...+.++.|+|+ .+..+++++.|+.+.+|+...+....
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 206 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLR-SWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV 206 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTT-CCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE
T ss_pred EEecCCCcEEEecCCChHHhc-cccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee
Confidence 999999999999998643221 1110 0112367889999999997 35689999999999888877765422
Q ss_pred EecCccccCCccCeEEEEEeCCCC---cEEEEecCCCcEEEEEccCCc--------------------------------
Q 016974 196 VFGGEFQSGHTADVLSVSISGSNS---RMFVSGSCDSTARLWDTRVAS-------------------------------- 240 (379)
Q Consensus 196 ~~~~~~~~~h~~~v~~~~~~~~~~---~~l~sg~~d~~i~vwd~~~~~-------------------------------- 240 (379)
... ..+|...|.+++++|... ++|++|+.||.|++||++...
T Consensus 207 ~~~---~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (351)
T 3f3f_A 207 AAK---LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSN 283 (351)
T ss_dssp EEE---CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------
T ss_pred eee---cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccc
Confidence 211 257899999999998542 799999999999999987531
Q ss_pred -------------cceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEE
Q 016974 241 -------------RAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQV 287 (379)
Q Consensus 241 -------------~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~ 287 (379)
..+..+.+|...|++++|+|++++|++++.||.|++||+.+++.+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 284 TEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp -------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred cceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 45667788999999999999999999999999999999998765543
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=5.6e-28 Score=225.38 Aligned_cols=287 Identities=10% Similarity=0.048 Sum_probs=214.6
Q ss_pred ccccEEEEE---eeCCCCeEEE--------------EcCCCcEEEE--ECCCC--ceeeEeecCCcceEEEEECCCCCEE
Q 016974 66 HAGKVYSLD---WTSERNRIVS--------------ASQDGRLIVW--NALTS--QKTHAIKLPCAWVMTCAFSPTGQSV 124 (379)
Q Consensus 66 H~~~v~~~~---~~~~~~~l~s--------------~s~D~~v~iw--d~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l 124 (379)
+...+..++ |+|+++.++. ++.|+.++|| |..++ +....+..+ ..+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 344577788 8887766553 3344433444 44334 344445444 345689999988888
Q ss_pred EEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccC
Q 016974 125 ACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSG 204 (379)
Q Consensus 125 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 204 (379)
++++.|+.+++||+.+.... .......+.+|.+.|.+++|.|+ +..+++++.|+.|++||+.++.....+ ..
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~v~~~d~~~~~~~~~~-----~~ 209 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPEH-NELWVSQMQANAVHVFDLKTLAYKATV-----DL 209 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGTEEEEEETTTCCEEEEE-----EC
T ss_pred EEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcCC-CEEEEEECCCCEEEEEECCCceEEEEE-----cC
Confidence 88999999999998753210 00000134588899999999876 468899999999999999987766655 36
Q ss_pred CccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee--------CCCeEEE
Q 016974 205 HTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS--------DDGTCRL 276 (379)
Q Consensus 205 h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s--------~D~~i~i 276 (379)
|...+.++++++.+..++++++.|+.|++||++.. +.+..+.. ...+.+++|+|+|+++++++ .|+.|++
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~ 287 (433)
T 3bws_A 210 TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK-LEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGI 287 (433)
T ss_dssp SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEE
T ss_pred CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-cEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEE
Confidence 77889999999866556677778999999999854 44555554 35699999999999999888 5899999
Q ss_pred EECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEE-EEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCC
Q 016974 277 FDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLL-FAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADG 355 (379)
Q Consensus 277 wd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~ 355 (379)
||+++++.+...... ..+.+++|+|+|+++ ++++.|+.|++||..+++....+ .+...+.+++|+|+|
T Consensus 288 ~d~~~~~~~~~~~~~------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~s~dg 356 (433)
T 3bws_A 288 YSMDKEKLIDTIGPP------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI-----PVFDKPNTIALSPDG 356 (433)
T ss_dssp EETTTTEEEEEEEEE------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE-----ECSSSEEEEEECTTS
T ss_pred EECCCCcEEeeccCC------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe-----cCCCCCCeEEEcCCC
Confidence 999988766554221 247899999999855 55688999999999888776655 255678999999999
Q ss_pred CeEEEeeC---------------CCcEEEEecCc
Q 016974 356 SALCTGSW---------------DTNLKIWAFGG 374 (379)
Q Consensus 356 ~~l~s~s~---------------D~~i~vw~~~~ 374 (379)
++|++++. ||.|++|+...
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 99998877 57999999865
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.7e-28 Score=224.90 Aligned_cols=279 Identities=15% Similarity=0.143 Sum_probs=210.4
Q ss_pred cccEEEEEeeCCCC-eEEEEc----CCC----cEEEEEC--CCCcee--eEeecCCcceEEEEECC--------------
Q 016974 67 AGKVYSLDWTSERN-RIVSAS----QDG----RLIVWNA--LTSQKT--HAIKLPCAWVMTCAFSP-------------- 119 (379)
Q Consensus 67 ~~~v~~~~~~~~~~-~l~s~s----~D~----~v~iwd~--~~~~~~--~~~~~~~~~v~~~~~s~-------------- 119 (379)
...+...+|.+.+. .+++|+ .|| ++++||+ .+++.+ ..+..+...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34677788988875 566776 567 9999999 888877 44677766666665553
Q ss_pred CCCEEEEeeCC------CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC---eEEEeecCC
Q 016974 120 TGQSVACGGLD------SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ---TCVLWDITT 190 (379)
Q Consensus 120 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~---~i~~wd~~~ 190 (379)
.+..++.++.+ +.+++||++.. ..+.+.+|...+.+++|+|++ ..|++++.++ .|++||+.+
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~--------~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~t 212 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGY--------NQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLAN 212 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSC--------SCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTT
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCC--------CCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCC
Confidence 25666666554 79999998632 234567888999999999986 5788888775 999999998
Q ss_pred CeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCc--EEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEe
Q 016974 191 GLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDST--ARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTG 268 (379)
Q Consensus 191 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~--i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~ 268 (379)
+..... ..|...+.+++|+|.+..++++++.|+. |++||+... ....+..|...+.+++|+|||++|+++
T Consensus 213 g~~~~l------~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 213 GAVRQV------ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG--QIRQVTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp CCEEEE------ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--CEEECCCCSSCEEEEEECTTSSEEEEE
T ss_pred CcEEEe------ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC--CEEeCcCCCCcccceEECCCCCEEEEE
Confidence 866433 3466789999999854444447777665 899998754 235677888899999999999999988
Q ss_pred eC-CC--eEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec---CcEEEEeCCCceEEEecccccCCc
Q 016974 269 SD-DG--TCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN---GDCYVWDTLLAKVVLNLGSLQNSH 342 (379)
Q Consensus 269 s~-D~--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~~h 342 (379)
+. ++ .|.+||+.+++... +.. +...+.+++|+|+|++|++++.+ ..|++||..+++.. .+ ..|
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~-l~~-----~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l----~~~ 353 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQR-ITW-----EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VL----SST 353 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEE-CCC-----SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-EC----CCS
T ss_pred ECCCCCcEEEEEECCCCCEEE-Eec-----CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-Ee----cCC
Confidence 86 44 68888988776432 111 12357899999999999988764 58999999887653 33 234
Q ss_pred cCceeEEEECCCCCeEEEeeCCC---cEEEEecCc
Q 016974 343 EGRITCLGLSADGSALCTGSWDT---NLKIWAFGG 374 (379)
Q Consensus 343 ~~~v~~~~~s~d~~~l~s~s~D~---~i~vw~~~~ 374 (379)
. .+.+++|+|||+.|++++.|+ .|++|++.+
T Consensus 354 ~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 354 F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 3 789999999999999999887 799999876
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=2.9e-27 Score=226.35 Aligned_cols=287 Identities=11% Similarity=0.054 Sum_probs=216.1
Q ss_pred EeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeee
Q 016974 74 DWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRM 153 (379)
Q Consensus 74 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~ 153 (379)
.|+|++..+++++.|++|.+||..+++.+.++..+.. +..++|+|+|++|++++.|+.|.+||+.... ......
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-----~~~~~~ 217 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKE-----PTKVAE 217 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSS-----CEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCC-----CcEEEE
Confidence 3788898999999999999999999999988885444 8899999999999999999999999993111 123344
Q ss_pred ecccccceEEEEEec----CCCceEEEee-CCCeEEEeecCCCeeEEEecCccc-----cCC-ccCeEEEEEeCCCCcEE
Q 016974 154 LSGHKGYVSCCQYVP----DEDTHLITSS-GDQTCVLWDITTGLRTSVFGGEFQ-----SGH-TADVLSVSISGSNSRMF 222 (379)
Q Consensus 154 ~~~h~~~v~~~~~~~----~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~~-----~~h-~~~v~~~~~~~~~~~~l 222 (379)
+.. ...+..++|+| ++. ++++++ .+++|.+||..++..+..+..... .-| ...+..+.+++.+..++
T Consensus 218 i~~-g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 218 IKI-GIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEC-CSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred Eec-CCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 443 34578899999 764 566665 689999999998877666532110 002 23688899998778888
Q ss_pred EEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee-CCCeEEEEECCCCceeEEEeeccCCCCCCCeE
Q 016974 223 VSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS-DDGTCRLFDIRTGHQLQVYYQQHGENEIPHVT 301 (379)
Q Consensus 223 ~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 301 (379)
++...++.|.+||+............+...+..++|+|+|++|++++ .+++|.+||+.+++.+..+.... ..+.....
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~-~ph~g~g~ 374 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK-TPHPGRGA 374 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SBCCTTCE
T ss_pred EEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC-CCCCCCCc
Confidence 89999999999998765332212224566788999999999876554 68899999999998776654321 11222222
Q ss_pred EEEEccC-CCEEEEEE-ecCcEEEEeCCC-------ceEEEecccccCCccCceeEEEECCCCCeEEEee-------CCC
Q 016974 302 SIAFSIS-GRLLFAGY-SNGDCYVWDTLL-------AKVVLNLGSLQNSHEGRITCLGLSADGSALCTGS-------WDT 365 (379)
Q Consensus 302 ~~~fs~~-g~~l~sg~-~dg~i~iwd~~~-------~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s-------~D~ 365 (379)
.+ ++|+ |++++++. .|++|.+||..+ .+.+.++ ..|.+.+..++|+|||++|++++ .|+
T Consensus 375 ~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l----~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~ 449 (543)
T 1nir_A 375 NF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL----QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQ 449 (543)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE----ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHT
T ss_pred cc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE----EcCCCCceEEEcCCCCCcEEEecCCCCCcccCc
Confidence 23 4777 66666665 689999999887 6777766 45777788899999999999987 378
Q ss_pred cEEEEecCc
Q 016974 366 NLKIWAFGG 374 (379)
Q Consensus 366 ~i~vw~~~~ 374 (379)
+|+|||+..
T Consensus 450 ~v~v~d~~~ 458 (543)
T 1nir_A 450 SVAVFDLKN 458 (543)
T ss_dssp CEEEEETTC
T ss_pred eEEEEECCC
Confidence 999999875
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=5e-27 Score=224.73 Aligned_cols=295 Identities=13% Similarity=0.125 Sum_probs=217.5
Q ss_pred Eeeccc-cccccEEEEEeeCCCCeEEEEcCCCcEEEEEC--CCCceeeEeecCCcceEEEEECC----CCCEEEEeeC-C
Q 016974 59 CCRTLQ-GHAGKVYSLDWTSERNRIVSASQDGRLIVWNA--LTSQKTHAIKLPCAWVMTCAFSP----TGQSVACGGL-D 130 (379)
Q Consensus 59 ~~~~l~-gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~----~g~~l~~~~~-d 130 (379)
+..++. +|. +++++|+|||++|++++.|++|++||+ .+++.+.++.. ...+..++|+| +|+++++++. +
T Consensus 171 ~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 171 IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 445555 443 889999999999999999999999999 88888888874 45679999999 9999999885 8
Q ss_pred CcEEEEEcCCCCCCCCCcceeeeecc----------cc-cceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC
Q 016974 131 SVCSIFNLNSPTDKDGNLPVSRMLSG----------HK-GYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 199 (379)
Q Consensus 131 ~~i~iw~~~~~~~~~~~~~~~~~~~~----------h~-~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 199 (379)
+++.+||..+.. +...+.. |. ..+..+.++|++..++++...+++|.+||..+........
T Consensus 248 ~~v~v~D~~t~~-------~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~- 319 (543)
T 1nir_A 248 PQFAIMDGETLE-------PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS- 319 (543)
T ss_dssp SEEEEEETTTCC-------EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEE-
T ss_pred CeEEEEeccccc-------cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEE-
Confidence 999999976422 2222222 22 2688899999888888999999999999998754322110
Q ss_pred ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEec----ccCCeeEEEEccC-CCEEEEee-CCCe
Q 016974 200 EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG----HEGDVNTVKFFPD-GNRFGTGS-DDGT 273 (379)
Q Consensus 200 ~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~----h~~~v~~v~~sp~-g~~l~s~s-~D~~ 273 (379)
..+...+..+.|+|.+..+++++..++.|.+||..+. +.+..+.. |.+....+ ++|+ |..++++. .|++
T Consensus 320 ---i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~ 394 (543)
T 1nir_A 320 ---IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS 394 (543)
T ss_dssp ---EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred ---eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce
Confidence 1234456678888744334556667899999999865 55655553 65444333 4677 66677775 6899
Q ss_pred EEEEECCC-------CceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-------ecCcEEEEeCCCceEE-Eec--c
Q 016974 274 CRLFDIRT-------GHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-------SNGDCYVWDTLLAKVV-LNL--G 336 (379)
Q Consensus 274 i~iwd~~~-------~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-------~dg~i~iwd~~~~~~~-~~~--~ 336 (379)
|.+||+.+ ++.++.+... + ..+..++|+|+|++|+++. .+++|.+||+.+.+.. ..+ +
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~-g----~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~ 469 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQ-G----GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA 469 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECS-C----SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcC-C----CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeech
Confidence 99999988 6777766432 1 2356799999999999987 3789999999877644 221 1
Q ss_pred cc--cCCccCceeEEEECCCCCeEEEeeC-----CCcEEEEecCc
Q 016974 337 SL--QNSHEGRITCLGLSADGSALCTGSW-----DTNLKIWAFGG 374 (379)
Q Consensus 337 ~~--~~~h~~~v~~~~~s~d~~~l~s~s~-----D~~i~vw~~~~ 374 (379)
.. ...+...+..++|+|||+.|+.+.+ |++|.|||...
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 470 EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp HHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred hhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 00 1345678999999999999997743 79999999765
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.8e-26 Score=214.21 Aligned_cols=266 Identities=14% Similarity=0.057 Sum_probs=199.7
Q ss_pred eccccccccEEEEEeeC--------------CCCeEEEEcCC------CcEEEEECCCCceeeEeecCCcceEEEEECCC
Q 016974 61 RTLQGHAGKVYSLDWTS--------------ERNRIVSASQD------GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPT 120 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~--------------~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 120 (379)
.++.+|...+..+++++ .+..++.++.+ ++|++||.. +.....+..+...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCC
Confidence 45777877777776664 15667766654 799999986 5556777778888999999999
Q ss_pred CCEEEEeeCCC---cEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCe--EEEeecCCCeeEE
Q 016974 121 GQSVACGGLDS---VCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQT--CVLWDITTGLRTS 195 (379)
Q Consensus 121 g~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~--i~~wd~~~~~~~~ 195 (379)
|++|++++.|+ .+++||+.+.. ...+..|.+.+.+++|+|++..++++++.|+. |.+||+.++...
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~- 260 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR- 260 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-
T ss_pred CCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-
Confidence 99999999885 99999997532 12456788889999999987544447776655 999999887643
Q ss_pred EecCccccCCccCeEEEEEeCCCCcEEEEecC-CC--cEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCC-
Q 016974 196 VFGGEFQSGHTADVLSVSISGSNSRMFVSGSC-DS--TARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDD- 271 (379)
Q Consensus 196 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-d~--~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D- 271 (379)
.+ ..|...+.++.|+| +++.++.++. ++ .|.+||+... ....+..|...+.+++|+|+|++|++++.+
T Consensus 261 ~l-----~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 261 QV-----TDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGG--APQRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp EC-----CCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSS--CCEECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred eC-----cCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCC--CEEEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 22 45677899999997 5566665554 55 5666687644 234455677789999999999999988864
Q ss_pred --CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC---cEEEEeCCCceEEEecccccCCccCce
Q 016974 272 --GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG---DCYVWDTLLAKVVLNLGSLQNSHEGRI 346 (379)
Q Consensus 272 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~~h~~~v 346 (379)
..|++||+.+++... +.. + ..+.+++|+|+|++|++++.++ .|++||+.... ...+ ..|.+.|
T Consensus 333 g~~~i~~~d~~~~~~~~-l~~-~-----~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-~~~l----~~~~~~v 400 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQV-LSS-T-----FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARL----PATDGQV 400 (415)
T ss_dssp SCEEEEEEETTTCCEEE-CCC-S-----SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-EEEC----CCSSSEE
T ss_pred CceEEEEEECCCCCEEE-ecC-C-----CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-EEEe----eCCCCCC
Confidence 589999999876532 211 1 1588999999999999988877 79999986443 3444 5688999
Q ss_pred eEEEECCCCC
Q 016974 347 TCLGLSADGS 356 (379)
Q Consensus 347 ~~~~~s~d~~ 356 (379)
.+++|+|...
T Consensus 401 ~~~~~~~~~~ 410 (415)
T 2hqs_A 401 KFPAWSPYLH 410 (415)
T ss_dssp EEEEECCCCC
T ss_pred cCCccccccc
Confidence 9999999643
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4.1e-25 Score=198.48 Aligned_cols=281 Identities=14% Similarity=0.148 Sum_probs=197.1
Q ss_pred EeeCCCCe-EEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeC-CCcEEEEEcCCCCCCCCCccee
Q 016974 74 DWTSERNR-IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL-DSVCSIFNLNSPTDKDGNLPVS 151 (379)
Q Consensus 74 ~~~~~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~ 151 (379)
.|.++++. +++++.+++|++||..+++....+..+.... .++|+|+|+++++++. ++.+.+||+.+.. . ..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~-~~ 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-----P-KV 76 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-----C-EE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-----e-eE
Confidence 35555555 7888999999999999999888888776667 9999999997766655 8899999987532 1 13
Q ss_pred eeecccccceEEEEEecCCCceEEEeeCC-C--eEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC
Q 016974 152 RMLSGHKGYVSCCQYVPDEDTHLITSSGD-Q--TCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD 228 (379)
Q Consensus 152 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~--~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 228 (379)
..+..+.....+++|+|++. +++++..+ + .|.+||+.++.....+. +......++++|.+..+++++..+
T Consensus 77 ~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~~------~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTIP------IPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEEE------CCTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEEE------CCCCccceEECCCCCEEEEEecCC
Confidence 34455555555589999864 56655555 3 99999999887665542 223457899998555567777777
Q ss_pred Cc-EEEEEccCCccce---EEEecccCCeeEEEEccCCCEEE-EeeCCCeEEEEECCCCce---eEEEeeccCCCCCCCe
Q 016974 229 ST-ARLWDTRVASRAV---RTFHGHEGDVNTVKFFPDGNRFG-TGSDDGTCRLFDIRTGHQ---LQVYYQQHGENEIPHV 300 (379)
Q Consensus 229 ~~-i~vwd~~~~~~~~---~~~~~h~~~v~~v~~sp~g~~l~-s~s~D~~i~iwd~~~~~~---~~~~~~~~~~~~~~~v 300 (379)
+. |.+|++....... .........+..++|+|+|++++ ++..++.|.+||+.+++. +..+.. ...+
T Consensus 150 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~------~~~~ 223 (331)
T 3u4y_A 150 ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT------NNLP 223 (331)
T ss_dssp TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC------SSCC
T ss_pred CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC------CCCC
Confidence 88 9999987433221 11123345689999999999664 445789999999998887 544432 1245
Q ss_pred EEEEEccCCCEEEEEE-ecCcEEEEeCCCceE--EEecccccCCccC---ceeEEEECCCCCeEEEeeC-CCcEEEEecC
Q 016974 301 TSIAFSISGRLLFAGY-SNGDCYVWDTLLAKV--VLNLGSLQNSHEG---RITCLGLSADGSALCTGSW-DTNLKIWAFG 373 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~-~dg~i~iwd~~~~~~--~~~~~~~~~~h~~---~v~~~~~s~d~~~l~s~s~-D~~i~vw~~~ 373 (379)
..++|+|+|++|+++. .++.|.+||..+++. +..+......+.. ....++|+|||++|+.++. +++|++|++.
T Consensus 224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 224 GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp CCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 7899999999877665 577899999988776 2222111011122 2256899999998876554 6699999987
Q ss_pred c
Q 016974 374 G 374 (379)
Q Consensus 374 ~ 374 (379)
.
T Consensus 304 ~ 304 (331)
T 3u4y_A 304 G 304 (331)
T ss_dssp S
T ss_pred C
Confidence 6
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=5.8e-26 Score=226.15 Aligned_cols=285 Identities=11% Similarity=0.107 Sum_probs=205.9
Q ss_pred cccEEEEEeeCCCCeEEEEcC-CC-----cEEEEECCCCceeeEeecCC------------------------cceEEEE
Q 016974 67 AGKVYSLDWTSERNRIVSASQ-DG-----RLIVWNALTSQKTHAIKLPC------------------------AWVMTCA 116 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~-D~-----~v~iwd~~~~~~~~~~~~~~------------------------~~v~~~~ 116 (379)
...|.+++|+|||++|++++. |+ +|++||+.+++....+..+. ..+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346899999999999999998 88 99999999988766554432 2367889
Q ss_pred ECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEE
Q 016974 117 FSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV 196 (379)
Q Consensus 117 ~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 196 (379)
|+|||++|++++. +.+.+||+..... +....+..|...+..++|+|++ +.|+.++ ++.|.+||+.++.....
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCc-----ceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCCCEEEe
Confidence 9999999999887 8999999875310 0112355677789999999986 4677666 56999999988765443
Q ss_pred ecCccccCCcc----------------CeEEEEEeCCCCcEEEEecCCC-------------------------------
Q 016974 197 FGGEFQSGHTA----------------DVLSVSISGSNSRMFVSGSCDS------------------------------- 229 (379)
Q Consensus 197 ~~~~~~~~h~~----------------~v~~~~~~~~~~~~l~sg~~d~------------------------------- 229 (379)
.. .+.. .+.++.|+| +++.|++++.|+
T Consensus 188 ~~-----~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 188 TA-----DGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp CC-----CCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred cc-----CCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 21 1211 146788997 666677776654
Q ss_pred --cEEEEEccC-CccceEEEe--cccCCeeEEEEccCCCEEEEeeC-----CCeEEEEECCCCceeEEEeeccCCCCCCC
Q 016974 230 --TARLWDTRV-ASRAVRTFH--GHEGDVNTVKFFPDGNRFGTGSD-----DGTCRLFDIRTGHQLQVYYQQHGENEIPH 299 (379)
Q Consensus 230 --~i~vwd~~~-~~~~~~~~~--~h~~~v~~v~~sp~g~~l~s~s~-----D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 299 (379)
.|.+||+.. . +...... .|...+..++| |||++|+.++. +..|++||+.+++....+... .......
T Consensus 262 ~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~ 338 (741)
T 2ecf_A 262 QVKLGVISPAEQA-QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET-SPTWVPL 338 (741)
T ss_dssp EEEEEEECSSTTC-CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE-CSSCCCC
T ss_pred eeEEEEEECCCCC-ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC-CCCcCCc
Confidence 788889875 4 3332222 47778999999 99999987654 678999999998766554332 1111113
Q ss_pred eEEEEEccCCCEEEEEEecCcEEEEeCC-CceEEEecccccCCccCceeEE-EECCCCCeEE-EeeCCC--cEEEEecC
Q 016974 300 VTSIAFSISGRLLFAGYSNGDCYVWDTL-LAKVVLNLGSLQNSHEGRITCL-GLSADGSALC-TGSWDT--NLKIWAFG 373 (379)
Q Consensus 300 v~~~~fs~~g~~l~sg~~dg~i~iwd~~-~~~~~~~~~~~~~~h~~~v~~~-~~s~d~~~l~-s~s~D~--~i~vw~~~ 373 (379)
+..++|+|||++++++..||.++||... .++ ...+ ..|...|..+ +|+|||+.|+ +++.|+ +++||++.
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l----~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL----THGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES----CCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee----eecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 4578999999999999999977777653 333 4444 4566778777 5999999775 455555 89999864
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=8.3e-25 Score=196.95 Aligned_cols=278 Identities=11% Similarity=0.092 Sum_probs=183.7
Q ss_pred eEEEEcCCCcEEEEECCC-Cce-eeEeecCCcceEEEEECCCCCEEEEeeCC-CcEEEEEcCCCCCCCCCcceeeeeccc
Q 016974 81 RIVSASQDGRLIVWNALT-SQK-THAIKLPCAWVMTCAFSPTGQSVACGGLD-SVCSIFNLNSPTDKDGNLPVSRMLSGH 157 (379)
Q Consensus 81 ~l~s~s~D~~v~iwd~~~-~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~~h 157 (379)
.+++++.|+.|++||+.. ++. ......+...+..++|+|+|++|++++.+ +.+.+|+++... +.......+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD---GALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT---CCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC---CceeeccccccC
Confidence 345558899999999853 322 12222345668889999999998888886 999999997321 222223333333
Q ss_pred ccceEEEEEecCCCceEEEeeCCCeEEEeecCCC---eeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEE
Q 016974 158 KGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLW 234 (379)
Q Consensus 158 ~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vw 234 (379)
. .+..++|+|++..+++++..++.|.+||+..+ .....+ .....+.++.+++.+..+++++..++.|++|
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV------EGLDGCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE------CCCTTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc------cCCCCceEEEECCCCCEEEEecCCCCEEEEE
Confidence 3 67889999987544455556899999999433 222222 1223477788887444444444489999999
Q ss_pred EccCCccceE----EEec-ccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCC--Cce--eEEEee-ccCCCCCCCeEEE
Q 016974 235 DTRVASRAVR----TFHG-HEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRT--GHQ--LQVYYQ-QHGENEIPHVTSI 303 (379)
Q Consensus 235 d~~~~~~~~~----~~~~-h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~--~~~--~~~~~~-~~~~~~~~~v~~~ 303 (379)
|+........ .+.. ....+..++|+|+|++++.+ ..++.|.+||+.. +.. ...... .........+..+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 9975233221 2222 33478899999999977555 4889999999953 332 112111 1111112357789
Q ss_pred EEccCCCEEEEEE-ecCcEEEEeCC--C--ceEEEecccccCCccCceeEEEECCCCCeEEEee-CCCcEEEEecC
Q 016974 304 AFSISGRLLFAGY-SNGDCYVWDTL--L--AKVVLNLGSLQNSHEGRITCLGLSADGSALCTGS-WDTNLKIWAFG 373 (379)
Q Consensus 304 ~fs~~g~~l~sg~-~dg~i~iwd~~--~--~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s-~D~~i~vw~~~ 373 (379)
+|+|+|++|+++. .++.|++||.. . .+.+..+ ..+. .+.+++|+|||++|++++ .|+.|++|+++
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~----~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ----PTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE----ECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee----cCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9999999887554 78999999987 2 2333322 2233 378899999999888877 68999999764
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.4e-23 Score=189.94 Aligned_cols=271 Identities=14% Similarity=0.098 Sum_probs=199.5
Q ss_pred cccEEEEEeeCCCCeEEEEcC-------CCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEE-EeeCCCcEEEEEc
Q 016974 67 AGKVYSLDWTSERNRIVSASQ-------DGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVA-CGGLDSVCSIFNL 138 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~-------D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~d~~i~iw~~ 138 (379)
...+..++|+|+++.|++++. ++.|.+||..+++....+.... .+..++|+|+|++++ +...++.+.+||+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 346789999999998887774 5689999999999888776543 367889999999554 5556799999998
Q ss_pred CCCCCCCCCcceeeeeccccc---------ceEEEEEecCCCceEEEe-eCCCeEEEeecCCCeeEEEecCccccCCccC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKG---------YVSCCQYVPDEDTHLITS-SGDQTCVLWDITTGLRTSVFGGEFQSGHTAD 208 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~ 208 (379)
.+.. ....+..+.. .+..+.|+|++...+++. +.++.|.+||+.++.....+. .+...
T Consensus 119 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~ 186 (353)
T 3vgz_A 119 KTGE-------VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-----NTGKM 186 (353)
T ss_dssp TTCC-------EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-----CCCTT
T ss_pred CCCe-------eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-----CCCCc
Confidence 7532 2222222221 267899999876544444 358899999999887766552 23334
Q ss_pred eEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEec----ccCCeeEEEEccCCCEEEEee-CCCeEEEEECCCCc
Q 016974 209 VLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG----HEGDVNTVKFFPDGNRFGTGS-DDGTCRLFDIRTGH 283 (379)
Q Consensus 209 v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~----h~~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~~~~ 283 (379)
+..+.+++ +++.+++++.++.|.+||.... +....+.. +...+..++|+|+|++++.++ .++.|.+||+.+++
T Consensus 187 ~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 187 STGLALDS-EGKRLYTTNADGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CCCCEEET-TTTEEEEECTTSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEECC-CCCEEEEEcCCCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 66778887 5567777788999999998765 44444442 455688899999999776665 45899999999988
Q ss_pred eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEee
Q 016974 284 QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 284 ~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
.+..+.... ...++|+|+|++++++. .++.|.+||..+++....+. ....+.+++|+|||++|+.+.
T Consensus 265 ~~~~~~~~~-------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 265 ILAKVAAPE-------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD-----TPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEEEEECSS-------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE-----CCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEEcCC-------CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe-----cCCCCCeEEEcCCCCEEEEEE
Confidence 776654321 24689999999776665 68999999998888776552 223678999999999877766
Q ss_pred CC
Q 016974 363 WD 364 (379)
Q Consensus 363 ~D 364 (379)
.+
T Consensus 333 ~~ 334 (353)
T 3vgz_A 333 KQ 334 (353)
T ss_dssp EC
T ss_pred cc
Confidence 65
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=2.6e-25 Score=195.56 Aligned_cols=258 Identities=14% Similarity=0.124 Sum_probs=185.7
Q ss_pred EEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC-CCCCCCCcceeeeeccc-ccce
Q 016974 84 SASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS-PTDKDGNLPVSRMLSGH-KGYV 161 (379)
Q Consensus 84 s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~h-~~~v 161 (379)
+++.|++|++||+.+++.. .+..+...+.+++|+|+|++|++++ ++.+.+||+.. .. ......+| ...+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-------~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-------PEKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-------CEECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-------ceEeccccccccc
Confidence 4578999999999887755 4445677899999999999999987 78999999875 32 12233344 3677
Q ss_pred EEEEEecCCCceEEEee--CCCeEEEeec--CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEcc
Q 016974 162 SCCQYVPDEDTHLITSS--GDQTCVLWDI--TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTR 237 (379)
Q Consensus 162 ~~~~~~~~~~~~l~s~~--~d~~i~~wd~--~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~ 237 (379)
.+++|+|++ ..|++++ .++...+|.+ .++.. ..+ .+...+..+.|+|.+..++++++.++.+++|++.
T Consensus 88 ~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~------~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 88 NDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGTP-RLM------TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp SCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCCC-EEC------CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred cceEECCCC-CEEEEEEeCCCCcceEEEEECCCCce-EEe------ecCCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 889999986 5677777 4455666654 44432 222 1223478889998554455588899999999976
Q ss_pred CCccceEEEecccCCeeEEEEccCCCEEEEee-CCCeEEEEECC-CCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEE
Q 016974 238 VASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS-DDGTCRLFDIR-TGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAG 315 (379)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg 315 (379)
........+..|...+.+++|+|+|++|+.++ .|+.+++|++. .+..+..+.. +...+.+++|+|+|++|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-----SAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-----CSEEEEEEEECTTSSEEEEE
T ss_pred CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-----CCcccCCeEECCCCCEEEEE
Confidence 44344556677888999999999999888766 58999999876 3444333321 12358899999999999988
Q ss_pred Eec-----------CcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC
Q 016974 316 YSN-----------GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 316 ~~d-----------g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
+.+ +.|++||+.+++...... . .+|...+.+++|+|||+.|++++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFD-L-FGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEE-E-EESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeec-c-CCCCcccccceECCCCCEEEEEEecc
Confidence 876 569999987765322210 0 35677899999999999999887764
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=7.2e-26 Score=224.82 Aligned_cols=285 Identities=13% Similarity=0.070 Sum_probs=196.6
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCc---ceEEEEECCCCCEEEEeeCC---------CcEEEE
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCA---WVMTCAFSPTGQSVACGGLD---------SVCSIF 136 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~g~~l~~~~~d---------~~i~iw 136 (379)
.+.+++|+|||+++++ +.||+|++||..+++....+..+.. .+.+++|||||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3567899999998776 7899999999999988777766553 48899999999999999875 678899
Q ss_pred EcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCcc---------
Q 016974 137 NLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA--------- 207 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~--------- 207 (379)
|+.+... .......+|...+..++|+|++ +.|+.++. +.|.+||+.++....... .+..
T Consensus 97 d~~~~~~-----~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~~~~~~-----~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 97 KIPHGDP-----QSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQAIRVVS-----TGKEGVIYNGLSD 164 (723)
T ss_dssp ESSSCCC-----EECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCCEEEEC-----CCBTTTEEEEECC
T ss_pred ECCCCce-----EeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCceEEEec-----CCCCCceECcccc
Confidence 9875321 1111223455557888999986 46777665 799999998876554432 1222
Q ss_pred ---------CeEEEEEeCCCCcEEEEecCCC----------------------------------cEEEEEccCCccceE
Q 016974 208 ---------DVLSVSISGSNSRMFVSGSCDS----------------------------------TARLWDTRVASRAVR 244 (379)
Q Consensus 208 ---------~v~~~~~~~~~~~~l~sg~~d~----------------------------------~i~vwd~~~~~~~~~ 244 (379)
.+.++.|+| +++.|++++.|+ .|++||+.... ...
T Consensus 165 ~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~-~~~ 242 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT-HDL 242 (723)
T ss_dssp HHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC-CCE
T ss_pred eeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc-eeE
Confidence 237899997 667777766442 78999987543 234
Q ss_pred EEecc------cCCeeEEEEccCCCEEEEeeC----CCeEEEEECCCCceeEEEeeccCCCCCCC-eEEEEEccCCCEEE
Q 016974 245 TFHGH------EGDVNTVKFFPDGNRFGTGSD----DGTCRLFDIRTGHQLQVYYQQHGENEIPH-VTSIAFSISGRLLF 313 (379)
Q Consensus 245 ~~~~h------~~~v~~v~~sp~g~~l~s~s~----D~~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~fs~~g~~l~ 313 (379)
.+..+ ...+..++|+|||++|++.+. +..|++||+.+++....+...+. ..... ...++|||||+.|+
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-AWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-SCCCCCCCCCEECTTSCSEE
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC-CEEeccCCCceEcCCCCeEE
Confidence 44443 567899999999998877653 36799999998876554432211 11100 13679999999776
Q ss_pred E--EEecC------cEEEEeC-CCceE--EEecccccCCccCcee-EEEECCCCCeEEEeeCC---CcEEEEecC
Q 016974 314 A--GYSNG------DCYVWDT-LLAKV--VLNLGSLQNSHEGRIT-CLGLSADGSALCTGSWD---TNLKIWAFG 373 (379)
Q Consensus 314 s--g~~dg------~i~iwd~-~~~~~--~~~~~~~~~~h~~~v~-~~~~s~d~~~l~s~s~D---~~i~vw~~~ 373 (379)
. +..++ .|++||. ..+.. ...+ ..+...+. .++|+|||+.|+..+.+ ++++||++.
T Consensus 322 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 322 FIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSI----TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp EEEEECCSSSSCEEEEEEECSSCCSSSCCCCBS----CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EEEecccCCCcceeEEEEEeccCCCCccceeEe----ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 5 44566 5777873 33320 2222 22223344 46999999999876665 789999875
No 137
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=9.7e-25 Score=211.45 Aligned_cols=273 Identities=13% Similarity=0.113 Sum_probs=197.0
Q ss_pred cccEEEEEeeCCCCeEEEEcC-CCcEEEEECCCCceeeEeecCC-cceEEEEECCCCCEEEEeeC---CCcEEEEEcCCC
Q 016974 67 AGKVYSLDWTSERNRIVSASQ-DGRLIVWNALTSQKTHAIKLPC-AWVMTCAFSPTGQSVACGGL---DSVCSIFNLNSP 141 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~---d~~i~iw~~~~~ 141 (379)
..+|++++|+|||+.||+++. ||+++||++.+++ ...+..+. ..+..++|+|+ +.+++++. +....+|.++..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999999887 9999999985544 44454444 57899999999 77777765 566778776541
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
. .+... .+..+. .+...+|+|+++..+++.+.++.+.+||+.++....... +.. .++.++| ++++
T Consensus 99 ~--~g~~~---~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~------~~~--~~~~~sp-DG~~ 163 (582)
T 3o4h_A 99 R--PGEEQ---RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR------LPG--FGFVSDI-RGDL 163 (582)
T ss_dssp S--TTCCE---ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE------ESS--CEEEEEE-ETTE
T ss_pred C--CCccc---cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec------CCC--ceEEECC-CCCE
Confidence 1 01111 122121 233568888876655555555555599999886544431 111 6778887 6778
Q ss_pred EEEecCC----CcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCC--eEEEEECCCCceeEEEeeccCCC
Q 016974 222 FVSGSCD----STARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDG--TCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 222 l~sg~~d----~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
+++++.+ +.|++||+.... ...+.+|...+..++|||||++|+++..|+ .|++||+.+++.. .+ ..+
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~-~~~--- 236 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL-ELP--- 236 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-CCS---
T ss_pred EEEEEEcCCCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-cCC---
Confidence 8877766 789999987542 346778888999999999999999888888 8999999988765 32 211
Q ss_pred CCCCeEEEE--------EccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCc-
Q 016974 296 EIPHVTSIA--------FSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTN- 366 (379)
Q Consensus 296 ~~~~v~~~~--------fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~- 366 (379)
...+..++ |+|||+++++++.||++++|++ ++... .+.+.|.+++|+ |++++++++.+.+
T Consensus 237 -~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-------~~~~~v~~~~~s-dg~~l~~~s~~~~p 305 (582)
T 3o4h_A 237 -SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE-------APQGNHGRVVLW-RGKLVTSHTSLSTP 305 (582)
T ss_dssp -CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-------CCSSEEEEEEEE-TTEEEEEEEETTEE
T ss_pred -CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-------cCCCceEEEEec-CCEEEEEEcCCCCC
Confidence 12233444 9999999999999999999998 55432 234678999999 9999999888865
Q ss_pred --EEEEecCc
Q 016974 367 --LKIWAFGG 374 (379)
Q Consensus 367 --i~vw~~~~ 374 (379)
+++|+..+
T Consensus 306 ~~l~~~d~~~ 315 (582)
T 3o4h_A 306 PRIVSLPSGE 315 (582)
T ss_dssp EEEEEETTCC
T ss_pred CeEEEEcCCC
Confidence 67777654
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=4.5e-24 Score=220.08 Aligned_cols=297 Identities=13% Similarity=0.094 Sum_probs=214.9
Q ss_pred eeccccccccEEEEEeeCCCCeEEEEcCC------CcEEEEECCCCceeeEeecCCcce-------EEEEECCCCCEEEE
Q 016974 60 CRTLQGHAGKVYSLDWTSERNRIVSASQD------GRLIVWNALTSQKTHAIKLPCAWV-------MTCAFSPTGQSVAC 126 (379)
Q Consensus 60 ~~~l~gH~~~v~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~v-------~~~~~s~~g~~l~~ 126 (379)
.+.+.+|...|.+++|||||++||+++.+ ..|++||+.+++ ...+..|...+ ..++|+|||+++++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~ 123 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 123 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEE
Confidence 35677899999999999999999988654 479999988765 56677777777 89999999997777
Q ss_pred eeCC------CcEEEEEcCCCCCC---CCC---------------------------------c------ceeeeecccc
Q 016974 127 GGLD------SVCSIFNLNSPTDK---DGN---------------------------------L------PVSRMLSGHK 158 (379)
Q Consensus 127 ~~~d------~~i~iw~~~~~~~~---~~~---------------------------------~------~~~~~~~~h~ 158 (379)
++.+ ..+.+|++...... ... + .....+.+|.
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~ 203 (1045)
T 1k32_A 124 TDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMS 203 (1045)
T ss_dssp ECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCS
T ss_pred ECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCC
Confidence 7754 34666766432100 000 0 0112345788
Q ss_pred cceEEEEEecCCCceEEEeeCCCeEEEeecCC-CeeEEEec-------------Cc-c--------------------cc
Q 016974 159 GYVSCCQYVPDEDTHLITSSGDQTCVLWDITT-GLRTSVFG-------------GE-F--------------------QS 203 (379)
Q Consensus 159 ~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~-------------~~-~--------------------~~ 203 (379)
+.+.++.|+++ ..+++++.|+++.+|.+.. +.....+. +. . ..
T Consensus 204 ~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~ 281 (1045)
T 1k32_A 204 THVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIE 281 (1045)
T ss_dssp SCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECC
T ss_pred CcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeec
Confidence 88899999875 5667778889999997642 11111100 00 0 00
Q ss_pred C-----------CccCeEEEEEe-CCCCcEEEEecCCCcEEEEEccCCccceEEEecccC-CeeEEEEccCCCEEEEeeC
Q 016974 204 G-----------HTADVLSVSIS-GSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEG-DVNTVKFFPDGNRFGTGSD 270 (379)
Q Consensus 204 ~-----------h~~~v~~~~~~-~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~-~v~~v~~sp~g~~l~s~s~ 270 (379)
. |...+.++.|+ | +++.+++++ ++.|.+|+.... ....+..|.. .+..++|+ ||+.|+.++.
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGT--YVLKVPEPLRIRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSS--BEEECSCCSCEEEEEECSS-SEEEEEEEET
T ss_pred cCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCC--ceEEccCCCcceEEeeeEc-CCCeEEEEEC
Confidence 0 22246778888 6 566666666 778999987643 2334566777 89999999 9999999999
Q ss_pred CCeEE-EEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEE
Q 016974 271 DGTCR-LFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCL 349 (379)
Q Consensus 271 D~~i~-iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 349 (379)
+..+. +||+.+++..... .+...+..++|||||++|++++.++.|++||+.+++....+ ..|.+.+.++
T Consensus 357 ~~~l~~~~d~~~~~~~~l~------~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~----~~~~~~v~~~ 426 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAEKFE------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE----RSREAMITDF 426 (1045)
T ss_dssp TEEEEEEEETTTCCEEECC------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE----ECSSSCCCCE
T ss_pred CCceEEEEECCCCCceEec------CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec----cCCCCCccce
Confidence 88899 9999876543221 12346899999999999999999999999999887765544 3578889999
Q ss_pred EECCCCCeEEEeeCCC----------cEEEEecCc
Q 016974 350 GLSADGSALCTGSWDT----------NLKIWAFGG 374 (379)
Q Consensus 350 ~~s~d~~~l~s~s~D~----------~i~vw~~~~ 374 (379)
+|+|||++|++++.++ .|++|++..
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 9999999999888755 899999865
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=7.1e-24 Score=218.63 Aligned_cols=280 Identities=12% Similarity=0.072 Sum_probs=213.9
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCC-CceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcC
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALT-SQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~ 139 (379)
..+.+|.+.+.++.|+++ .++++++.|++++||.+.. +.....+..+. .+...+|+|+|+.|+.+ .++.+.+|++.
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC
Confidence 456889999999999988 6777888999999998643 33444454443 35567999999999887 48899999873
Q ss_pred CCCCCCCCcceeeeec-----------ccccceEEEEEe-cCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCcc
Q 016974 140 SPTDKDGNLPVSRMLS-----------GHKGYVSCCQYV-PDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA 207 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~-----------~h~~~v~~~~~~-~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~ 207 (379)
... +. .+. .|...+..++|+ |++ ..|++++ ++.+.+|++.++.... + ..|..
T Consensus 274 ~~~-------l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~~~~-~-----~~~~~ 337 (1045)
T 1k32_A 274 TEK-------IE-KIEIGDLESPEDRIISIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTYVLK-V-----PEPLR 337 (1045)
T ss_dssp TCC-------EE-ECCCCCCCBCCSEEEECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSBEEE-C-----SCCSC
T ss_pred ceE-------ee-eeccCcccccccccccccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCceEE-c-----cCCCc
Confidence 211 11 222 245578899999 976 5577666 8899999998775433 2 34555
Q ss_pred -CeEEEEEeCCCCcEEEEecCCCcEE-EEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee
Q 016974 208 -DVLSVSISGSNSRMFVSGSCDSTAR-LWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 285 (379)
Q Consensus 208 -~v~~~~~~~~~~~~l~sg~~d~~i~-vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~ 285 (379)
.+..+.|+ +++.++.++.+..+. +||.... ....+.+|...+..++|+|||++|++++.|+.|++||+.+++..
T Consensus 338 ~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~--~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~ 413 (1045)
T 1k32_A 338 IRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTG--KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT 413 (1045)
T ss_dssp EEEEEECSS--SEEEEEEEETTEEEEEEEETTTC--CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ceEEeeeEc--CCCeEEEEECCCceEEEEECCCC--CceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceE
Confidence 78888888 667777777788888 8888643 23344578889999999999999999999999999999988765
Q ss_pred EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC----------cEEEEeCCCceEEEecccccCCccCceeEEEECCCC
Q 016974 286 QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG----------DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADG 355 (379)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg----------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~ 355 (379)
..... +...+.+++|||||++|++++.++ .|++||+.+++ ...+ ..|...+.+++|+|||
T Consensus 414 ~~~~~-----~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l----~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 414 VIERS-----REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAA----TTENSHDYAPAFDADS 483 (1045)
T ss_dssp EEEEC-----SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEEC----SCSSSBEEEEEECTTS
T ss_pred EeccC-----CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEe----eCCCcccCCceEcCCC
Confidence 54422 233578899999999999887754 89999998876 4444 4577788999999999
Q ss_pred CeEEEeeCCCcEEEEecC
Q 016974 356 SALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 356 ~~l~s~s~D~~i~vw~~~ 373 (379)
+.|++++.++..++|+..
T Consensus 484 ~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 484 KNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEEEEESCCCCCEECSS
T ss_pred CEEEEEecccCCcCcchh
Confidence 999999999988888743
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2.4e-23 Score=206.22 Aligned_cols=280 Identities=16% Similarity=0.146 Sum_probs=194.8
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC-----CC
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS-----PT 142 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~-----~~ 142 (379)
..|.+++|+|| +.++.+ .|++|++||+.+++.. .+..+...+..++|+|+|+.|+++ .|+.|.+|++.+ ..
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 46999999999 555544 4599999999877554 344445667888999999999985 679999999975 32
Q ss_pred CCCCCcceeeeeccccc--------------ceEEEEEecCCCceEEEee------------------------------
Q 016974 143 DKDGNLPVSRMLSGHKG--------------YVSCCQYVPDEDTHLITSS------------------------------ 178 (379)
Q Consensus 143 ~~~~~~~~~~~~~~h~~--------------~v~~~~~~~~~~~~l~s~~------------------------------ 178 (379)
. ......+.. .+.++.|+|++ ..|++++
T Consensus 158 ~-------~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 158 A-------IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp C-------EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred c-------EEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 1 111122222 24788999986 5677766
Q ss_pred ---CCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCC-----cEEEEEccCCccceEEEe-cc
Q 016974 179 ---GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDS-----TARLWDTRVASRAVRTFH-GH 249 (379)
Q Consensus 179 ---~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~-----~i~vwd~~~~~~~~~~~~-~h 249 (379)
.+..|.+||+.++....... ...|...+.++.|+| +++.+++++.++ .|.+||+........... .+
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCC---CSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred CCCCeeEEEEEECCCCceEeecc---CCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 45789999998876543321 124666789999997 667777766665 899999876522222222 22
Q ss_pred cC---CeeEEEEcc--CCCEEEEeeCCCeEEEEECC-CCceeEEEeeccCCCCCCCeEE-EEEccCCCEEEEEEe-cC--
Q 016974 250 EG---DVNTVKFFP--DGNRFGTGSDDGTCRLFDIR-TGHQLQVYYQQHGENEIPHVTS-IAFSISGRLLFAGYS-NG-- 319 (379)
Q Consensus 250 ~~---~v~~v~~sp--~g~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~-~~fs~~g~~l~sg~~-dg-- 319 (379)
.. .+.+++|+| ||+++++++.|+.++||++. ++..+..+.. +...+.. ++|+|+|+.|+.++. ++
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-----~~~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK-----GEWEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC-----SSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC-----CCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 22 246789999 99999999999999999876 4554443322 1234665 799999998876654 43
Q ss_pred --cEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCC----CcEEEEecCc
Q 016974 320 --DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD----TNLKIWAFGG 374 (379)
Q Consensus 320 --~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D----~~i~vw~~~~ 374 (379)
.|+.||..+++. ..+ .|...+.+++|+|||++|+.+..+ +.|++|+...
T Consensus 381 ~~~l~~~d~~~~~~-~~l-----~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 381 ERHFYCIDIKGGKT-KDL-----TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp CBEEEEEETTCCCC-EES-----CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred eEEEEEEEcCCCCc-eec-----cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 677777666542 222 256678999999999998876444 4599999765
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=4.5e-23 Score=185.12 Aligned_cols=265 Identities=14% Similarity=0.076 Sum_probs=189.3
Q ss_pred CeEEEEcCCCcEEEEECCCCceeeEeecCCc--ceEEEEECCCCCEE-EEeeCCCcEEEEEcCCCCCCCCCcceeeeec-
Q 016974 80 NRIVSASQDGRLIVWNALTSQKTHAIKLPCA--WVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPTDKDGNLPVSRMLS- 155 (379)
Q Consensus 80 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~- 155 (379)
++|++++.|++|++||..+++....+..... .+..++|+|+|+.+ ++++.++.+.+||+.+.. ....+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-------~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE-------TLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-------EEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC-------eEeeEEc
Confidence 4789999999999999999988887775442 47889999999865 556668899999986532 112122
Q ss_pred cc----ccceEEEEEecCCCceEEEee------------CCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCC
Q 016974 156 GH----KGYVSCCQYVPDEDTHLITSS------------GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNS 219 (379)
Q Consensus 156 ~h----~~~v~~~~~~~~~~~~l~s~~------------~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 219 (379)
++ ...+..++|+|++. .++++. .++.|.+||+.++.....+.. ...+..+.++| ++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~s~-dg 146 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------PRQITMLAWAR-DG 146 (337)
T ss_dssp CBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC------CSSCCCEEECT-TS
T ss_pred CCcccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEeC------CCCcceeEECC-CC
Confidence 21 22466789999864 566654 579999999988766554421 23456777887 45
Q ss_pred cEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeC-CC-----------------------eEE
Q 016974 220 RMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSD-DG-----------------------TCR 275 (379)
Q Consensus 220 ~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~-D~-----------------------~i~ 275 (379)
++++++ ++.|.+||+... +....+..+.. ...+.|+|+|.+++..+. ++ .|.
T Consensus 147 ~~l~~~--~~~i~~~d~~~~-~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 222 (337)
T 1pby_B 147 SKLYGL--GRDLHVMDPEAG-TLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL 222 (337)
T ss_dssp SCEEEE--SSSEEEEETTTT-EEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEE
T ss_pred CEEEEe--CCeEEEEECCCC-cEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceE
Confidence 555555 688999999755 44444543331 123378999987755543 33 468
Q ss_pred EEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCC
Q 016974 276 LFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADG 355 (379)
Q Consensus 276 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~ 355 (379)
+||+.+++........ ....+.+++|+|+|++++++ ++.|++||..+++....+. ....+.+++|+|||
T Consensus 223 ~~d~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~s~dg 291 (337)
T 1pby_B 223 TMDLETGEMAMREVRI----MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-----LPHSYYSVNVSTDG 291 (337)
T ss_dssp EEETTTCCEEEEEEEE----CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-----CSSCCCEEEECTTS
T ss_pred EEeCCCCCceEeecCC----CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-----CCCceeeEEECCCC
Confidence 9999988765221211 12347889999999999988 7999999998887765542 12357899999999
Q ss_pred CeEEEeeCCCcEEEEecCc
Q 016974 356 SALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 356 ~~l~s~s~D~~i~vw~~~~ 374 (379)
++|++++.|+.|++|++..
T Consensus 292 ~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 292 STVWLGGALGDLAAYDAET 310 (337)
T ss_dssp CEEEEESBSSEEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECcC
Confidence 9999999999999999865
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.4e-23 Score=184.45 Aligned_cols=241 Identities=14% Similarity=0.120 Sum_probs=177.2
Q ss_pred ccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCC-CceeeEeecC-CcceEEEEECCCCCEEEEee--CCCcEEEEE
Q 016974 62 TLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALT-SQKTHAIKLP-CAWVMTCAFSPTGQSVACGG--LDSVCSIFN 137 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~--~d~~i~iw~ 137 (379)
.+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|+|++|++++ .++...||.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 5667889999999999999999886 88999999998 7766555444 35678899999999999998 446677777
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecC--CCeeEEEecCccccCCccCeEEEEEe
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDIT--TGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~--~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
++.... . ...+..+. .+..++|+|++..++++++.++.+++|++. ++.. ..+ ..+...+.++.|+
T Consensus 115 ~~~~~~---~---~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~-----~~~~~~~~~~~~s 181 (297)
T 2ojh_A 115 LPSTGG---T---PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRL-----THGEGRNDGPDYS 181 (297)
T ss_dssp EETTCC---C---CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EEC-----CCSSSCEEEEEEC
T ss_pred EECCCC---c---eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEc-----ccCCCccccceEC
Confidence 653221 1 12233332 478889999876555588899999999864 3332 222 3566778999999
Q ss_pred CCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCC-----------CeEEEEECCCCce
Q 016974 216 GSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDD-----------GTCRLFDIRTGHQ 284 (379)
Q Consensus 216 ~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D-----------~~i~iwd~~~~~~ 284 (379)
|.+..+++++..++.+++|++.........+..|...+.+++|+|+|++|++++.+ +.|.+||+.+++.
T Consensus 182 ~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 182 PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 84443444555699999999874445566777788889999999999999988876 5699999988765
Q ss_pred eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC
Q 016974 285 LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG 319 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg 319 (379)
........ +...+.+++|+|+|++|++++.+.
T Consensus 262 ~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 262 ETLFDLFG---GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEE---STTTSCSCCBCTTSSEEEEEEECC
T ss_pred eeeeccCC---CCcccccceECCCCCEEEEEEecc
Confidence 43332111 123477899999999998887654
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=3.2e-23 Score=206.34 Aligned_cols=279 Identities=11% Similarity=0.123 Sum_probs=194.3
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc--eeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCC
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
.|.+++|+|||++|++++. ++|++||+.++. ....+..+...+..++|+|||++|+.++. +.|.+||+....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~---- 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGR---- 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTE----
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCC----
Confidence 3789999999999999886 999999998873 44456666677999999999999999875 589999987532
Q ss_pred Ccceeeeeccccc----------------ceEEEEEecCCCceEEEeeCCC-----------------------------
Q 016974 147 NLPVSRMLSGHKG----------------YVSCCQYVPDEDTHLITSSGDQ----------------------------- 181 (379)
Q Consensus 147 ~~~~~~~~~~h~~----------------~v~~~~~~~~~~~~l~s~~~d~----------------------------- 181 (379)
.......+.. .+..+.|+|++ ..|++++.|+
T Consensus 184 ---~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 259 (741)
T 2ecf_A 184 ---QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA 259 (741)
T ss_dssp ---EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC
T ss_pred ---EEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC
Confidence 1111112221 14678999986 4677776655
Q ss_pred ----eEEEeecCC-CeeEEEecCccccCCccCeEEEEEeCCCCcEEEEec-----CCCcEEEEEccCCccceEEEecccC
Q 016974 182 ----TCVLWDITT-GLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS-----CDSTARLWDTRVASRAVRTFHGHEG 251 (379)
Q Consensus 182 ----~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-----~d~~i~vwd~~~~~~~~~~~~~h~~ 251 (379)
.|.+||+.+ +........ ..|...+..+.| | +++.++.++ .+..|++||+... .....+..+..
T Consensus 260 ~~~~~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~ 333 (741)
T 2ecf_A 260 NVQVKLGVISPAEQAQTQWIDLG---KEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASN-QQRVLAHETSP 333 (741)
T ss_dssp CCEEEEEEECSSTTCCCEEECCC---SCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTC-CEEEEEEEECS
T ss_pred CCeeEEEEEECCCCCceEEecCC---CCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCC-ceEEEEEcCCC
Confidence 788899987 754433211 246778899999 7 556666543 3568999998765 34444444443
Q ss_pred ----CeeEEEEccCCCEEEEeeCCCeEEEEECC-CCceeEEEeeccCCCCCCCeEEE-EEccCCCEEEEE-EecC--cEE
Q 016974 252 ----DVNTVKFFPDGNRFGTGSDDGTCRLFDIR-TGHQLQVYYQQHGENEIPHVTSI-AFSISGRLLFAG-YSNG--DCY 322 (379)
Q Consensus 252 ----~v~~v~~sp~g~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~-~fs~~g~~l~sg-~~dg--~i~ 322 (379)
.+..++|+|||+++++++.|+.++||.+. ++. ...+.. +...+..+ .|+|+|+.|+.. +.++ .++
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~-----~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH-----GNWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC-----SSSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee-----cceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 45689999999999999999988887664 233 333221 12346676 599999977654 4555 899
Q ss_pred EEeCCC-ceEEEecccccCCccCceeEEEECCCCCeEEEeeCC----CcEEEEecCc
Q 016974 323 VWDTLL-AKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD----TNLKIWAFGG 374 (379)
Q Consensus 323 iwd~~~-~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D----~~i~vw~~~~ 374 (379)
+|++.. ++....+ .. ...+..++|+|||+.|+....+ ..+++|+..+
T Consensus 408 l~~~~~~g~~~~~l----~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 408 IYAVPLQGGQPQRL----SK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp EEEEETTCCCCEEC----CC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEEcCCCCeeec----cc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 998753 3323333 22 4567899999999998875444 4688887654
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1.1e-21 Score=178.53 Aligned_cols=278 Identities=10% Similarity=0.011 Sum_probs=178.0
Q ss_pred cCCCcEEEEEC--CCCceeeEeecCCcceEEEEECCCCCEEEEeeCC----CcEEEEEcCCCCCCCCCcceeeeeccccc
Q 016974 86 SQDGRLIVWNA--LTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD----SVCSIFNLNSPTDKDGNLPVSRMLSGHKG 159 (379)
Q Consensus 86 s~D~~v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 159 (379)
+.++.|.+|++ .+++.......+......++|+|+|++|++++.+ +.+.+|+++... +..........+..
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~---g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK---GTLHLLNTQKTMGA 100 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT---TEEEEEEEEECSSS
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC---CcEEEeeEeccCCC
Confidence 45678999865 4555433222245566778999999999999886 799999987531 22222233333444
Q ss_pred ceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEe------cCcc---ccCCccCeEEEEEeCCCCcEEEEecCCCc
Q 016974 160 YVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVF------GGEF---QSGHTADVLSVSISGSNSRMFVSGSCDST 230 (379)
Q Consensus 160 ~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~------~~~~---~~~h~~~v~~~~~~~~~~~~l~sg~~d~~ 230 (379)
....+++ ++..++++...+++|.+|++......... .... ...+...+.+++++|....+++++..++.
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 4555666 44434444457899999999753221111 0000 01123345778999844446666667899
Q ss_pred EEEEEccCCcc------c------eEEEecccCCeeEEEEccCCCEEEEee-CCCeEEEEECCCCceeEEEeeccCCCCC
Q 016974 231 ARLWDTRVASR------A------VRTFHGHEGDVNTVKFFPDGNRFGTGS-DDGTCRLFDIRTGHQLQVYYQQHGENEI 297 (379)
Q Consensus 231 i~vwd~~~~~~------~------~~~~~~h~~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 297 (379)
|++|++..... . ......+...+..++|+|||+++++++ .++.|.+||+.++...............
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 99999875432 1 111223445678999999999887776 6899999999876432221111111122
Q ss_pred CCeEEEEEccCCCEEEEEEec--CcEEEEeCC--Cce--EEEecccccCCccCceeEEEECCCCCeEEEee-CCCcEEEE
Q 016974 298 PHVTSIAFSISGRLLFAGYSN--GDCYVWDTL--LAK--VVLNLGSLQNSHEGRITCLGLSADGSALCTGS-WDTNLKIW 370 (379)
Q Consensus 298 ~~v~~~~fs~~g~~l~sg~~d--g~i~iwd~~--~~~--~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s-~D~~i~vw 370 (379)
.....++|+|+|++|+++..+ +.|.+|++. +++ .+..+ .. ...+.+++|+|||++|++++ .++.|.+|
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~----~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ----LT-GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE----EC-SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe----cC-CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 346899999999999777654 889999975 333 22222 11 34578899999999998887 67999998
Q ss_pred ecC
Q 016974 371 AFG 373 (379)
Q Consensus 371 ~~~ 373 (379)
.++
T Consensus 334 ~~d 336 (361)
T 3scy_A 334 ERD 336 (361)
T ss_dssp EEC
T ss_pred EEE
Confidence 775
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=7.8e-22 Score=177.00 Aligned_cols=258 Identities=10% Similarity=0.032 Sum_probs=177.2
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcC-CCcEEEEECCCCce-eeEeecCCcceEEEEECCCCCEEEEeeCCC---cEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQ-DGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPTGQSVACGGLDS---VCSI 135 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~-D~~v~iwd~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~---~i~i 135 (379)
..+..+...+ +++|+|++++|++++. ++.|.+||..+++. ...+..+.....+++|+|+|++++++..++ .+.+
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v 112 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQS 112 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEE
Confidence 3444455566 9999999997666554 89999999998887 666666655555589999999999655553 8999
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCe-EEEeecCCCeeEEEecCccccCCccCeEEEEE
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQT-CVLWDITTGLRTSVFGGEFQSGHTADVLSVSI 214 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~-i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
||+.... ....+.. ......++|+|++..++++...++. |.+|++............ ..........+.+
T Consensus 113 ~d~~~~~-------~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 113 YSFLKNK-------FISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE-FISGGTRPFNITF 183 (331)
T ss_dssp EETTTTE-------EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE-EECSSSSEEEEEE
T ss_pred EECCCCC-------eEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc-cccCCCCccceEE
Confidence 9987532 2223332 2345789999987656666677788 999998753222111100 1123345788899
Q ss_pred eCCCCcEEEEecCCCcEEEEEccCCccc---eEEEecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCce--eEEE
Q 016974 215 SGSNSRMFVSGSCDSTARLWDTRVASRA---VRTFHGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGHQ--LQVY 288 (379)
Q Consensus 215 ~~~~~~~l~sg~~d~~i~vwd~~~~~~~---~~~~~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~~--~~~~ 288 (379)
+|....+++++..++.|++||+... +. +..+.. ...+..++|+|+|++++.+ ..++.|.+||+.+++. +..+
T Consensus 184 spdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 184 TPDGNFAFVANLIGNSIGILETQNP-ENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSST-TSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCC-cccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 9854446677778999999998755 34 555553 4667899999999977555 4678899999998876 3322
Q ss_pred eec--cCCCCCCCeEEEEEccCCCEEEEEEe-cCcEEEEeCCCce
Q 016974 289 YQQ--HGENEIPHVTSIAFSISGRLLFAGYS-NGDCYVWDTLLAK 330 (379)
Q Consensus 289 ~~~--~~~~~~~~v~~~~fs~~g~~l~sg~~-dg~i~iwd~~~~~ 330 (379)
... ...........++|+|+|++|++++. ++.|.+||+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred ccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 211 00111112356899999999877665 5699999987644
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=9.5e-22 Score=177.82 Aligned_cols=275 Identities=9% Similarity=0.049 Sum_probs=175.8
Q ss_pred CCCcEEEEEC--CCCceee-EeecCCcceEEEEECCCCCEEEEeeC---CCcEEEEEcCCCCCCCCCcceeeeecccccc
Q 016974 87 QDGRLIVWNA--LTSQKTH-AIKLPCAWVMTCAFSPTGQSVACGGL---DSVCSIFNLNSPTDKDGNLPVSRMLSGHKGY 160 (379)
Q Consensus 87 ~D~~v~iwd~--~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~ 160 (379)
.++.+.+|++ .+++... ....+......++|+|+|+ |++++. ++.+.+|++... .......+..+...
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-----~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-----TAHKLNTVVAPGTP 87 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT-----EEEEEEEEEEESCC
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC-----cEEEeeeeecCCCC
Confidence 4566777765 4454332 2223345567799999999 555544 689999998542 22233333446667
Q ss_pred eEEEEEecCCCceEEEee-CCCeEEEeecCC-Cee--EEEecCccc----cCCccCeEEEEEeCCCCcEEEEecCCCcEE
Q 016974 161 VSCCQYVPDEDTHLITSS-GDQTCVLWDITT-GLR--TSVFGGEFQ----SGHTADVLSVSISGSNSRMFVSGSCDSTAR 232 (379)
Q Consensus 161 v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~-~~~--~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 232 (379)
+..++|+|++. .|++++ .+++|.+||+.. +.. ...+..... ..+...+..++++|. +++++++..++.|+
T Consensus 88 p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~ 165 (347)
T 3hfq_A 88 PAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVY 165 (347)
T ss_dssp CSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEE
T ss_pred CEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEE
Confidence 78899999875 455555 789999999953 321 111110000 012234778999985 45888888899999
Q ss_pred EEEccCCccce--EEEecc-cCCeeEEEEccCCCEEEE-eeCCCeEEEEECCC--CceeE--EEeecc-CCCCCCCeEEE
Q 016974 233 LWDTRVASRAV--RTFHGH-EGDVNTVKFFPDGNRFGT-GSDDGTCRLFDIRT--GHQLQ--VYYQQH-GENEIPHVTSI 303 (379)
Q Consensus 233 vwd~~~~~~~~--~~~~~h-~~~v~~v~~sp~g~~l~s-~s~D~~i~iwd~~~--~~~~~--~~~~~~-~~~~~~~v~~~ 303 (379)
+||+....... ..+..+ ...+..++|+|||+++++ ...++.|.+|++.. ++... ...... .......+..+
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 245 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI 245 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence 99997332222 122222 235788999999996655 46788999999874 43211 111100 00011347899
Q ss_pred EEccCCCEEEE-EEecCcEEEEeCCCc---eEEEecccccCCccCceeEEEECCCCCeEEEeeCC-CcEEEEecC
Q 016974 304 AFSISGRLLFA-GYSNGDCYVWDTLLA---KVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD-TNLKIWAFG 373 (379)
Q Consensus 304 ~fs~~g~~l~s-g~~dg~i~iwd~~~~---~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D-~~i~vw~~~ 373 (379)
+|+|+|++|++ ...++.|.+||+... +.+..+ ..+...+.+++|+|||++|++++.+ +.|.+|+++
T Consensus 246 ~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 246 RLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI----STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE----ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE----ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 99999998855 456889999997622 233222 2344567899999999999888765 899999664
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=1.3e-23 Score=208.06 Aligned_cols=282 Identities=11% Similarity=0.090 Sum_probs=187.0
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCcee-eEeecCC-----------------cceEEEEECCCCCEEEEeeCCC
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKT-HAIKLPC-----------------AWVMTCAFSPTGQSVACGGLDS 131 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~-----------------~~v~~~~~s~~g~~l~~~~~d~ 131 (379)
+..+.|. ++.+++++.|+ | +||+.+++.. ..+..+. ..+.+++|+|+ +.++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4557888 66777888888 8 9999998873 3332221 45899999999 655555 359
Q ss_pred cEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCC-----CeeEEEecCccc----
Q 016974 132 VCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT-----GLRTSVFGGEFQ---- 202 (379)
Q Consensus 132 ~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-----~~~~~~~~~~~~---- 202 (379)
.+.+||+.+.. ...+..+...+.+++|+|++. .|++ +.|+.|.+||+.+ +...........
T Consensus 102 ~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG~-~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 102 GLVGFDMLARK--------VTYLFDTNEETASLDFSPVGD-RVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp EEEEEETTTTE--------EEEEECCTTCCTTCEECTTSS-EEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred EEEEEECCCCc--------eEEccCCcccccCCcCCCCCC-EEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 99999986521 123345566678889999864 5666 4789999999987 654432211000
Q ss_pred -----cCCccCeEEEEEeCCCCcEEEEec---------------------------------CCCcEEEEEccCCccceE
Q 016974 203 -----SGHTADVLSVSISGSNSRMFVSGS---------------------------------CDSTARLWDTRVASRAVR 244 (379)
Q Consensus 203 -----~~h~~~v~~~~~~~~~~~~l~sg~---------------------------------~d~~i~vwd~~~~~~~~~ 244 (379)
..+...+.++.|+| ++++|++++ .+..|++||+.... ...
T Consensus 172 g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~-~~~ 249 (706)
T 2z3z_A 172 GQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK-TVY 249 (706)
T ss_dssp SSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE-EEE
T ss_pred ccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc-eEe
Confidence 00011247888997 667777776 44679999987542 222
Q ss_pred EE--ecccCCeeEEEEccCCCEEEEeeCCC-----eEEEEECCCCceeEEEeeccCCCCCCCeEEEEEcc--CCCEEEEE
Q 016974 245 TF--HGHEGDVNTVKFFPDGNRFGTGSDDG-----TCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSI--SGRLLFAG 315 (379)
Q Consensus 245 ~~--~~h~~~v~~v~~sp~g~~l~s~s~D~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~--~g~~l~sg 315 (379)
.. ..|...+.+++|+|||++|++++.|+ .|++||+.+++................+..++|+| +|++++++
T Consensus 250 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 250 LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEE
T ss_pred eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEE
Confidence 22 24667799999999999999988776 89999999884444333222221122346789999 99999999
Q ss_pred EecCcEEEEeCC-CceEEEecccccCCccCceeE-EEECCCCCeEEEeeCC-C----cEEEEecC
Q 016974 316 YSNGDCYVWDTL-LAKVVLNLGSLQNSHEGRITC-LGLSADGSALCTGSWD-T----NLKIWAFG 373 (379)
Q Consensus 316 ~~dg~i~iwd~~-~~~~~~~~~~~~~~h~~~v~~-~~~s~d~~~l~s~s~D-~----~i~vw~~~ 373 (379)
..||.+++|+.. .++....+ ..|...+.. ++|+|||+.|+.++.+ + .|+.|++.
T Consensus 330 ~~~g~~~l~~~~~~~~~~~~l----~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 330 RRDGWNHLYLYDTTGRLIRQV----TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp CTTSSCEEEEEETTSCEEEEC----CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred ccCCccEEEEEECCCCEEEec----CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 999999998765 44545444 346667776 7999999988765554 4 45555553
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=4.4e-22 Score=179.09 Aligned_cols=277 Identities=13% Similarity=0.156 Sum_probs=179.0
Q ss_pred cccccEEEEEeeCCCCeEEEEcCC-CcEEEEECC--CCce--eeEeecCCcceEEEEECCCCCEEEEeeC-CCcEEEEEc
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQD-GRLIVWNAL--TSQK--THAIKLPCAWVMTCAFSPTGQSVACGGL-DSVCSIFNL 138 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D-~~v~iwd~~--~~~~--~~~~~~~~~~v~~~~~s~~g~~l~~~~~-d~~i~iw~~ 138 (379)
.|...+.+++|+|++++|++++.+ +.|++|++. +++. +..+..+. .+..++|+|+|+++++++. ++.+.+|++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 467788999999999988888876 999999987 4543 33444433 6788999999998877665 888999998
Q ss_pred CCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCC-CeeEEEecCccccCCccCeEEEEEeCC
Q 016974 139 NSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT-GLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
.... .......+..+ ..+.+++|+|++...++++..++.|.+||+.+ +.................+..+.++|.
T Consensus 114 ~~~~----~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 114 EDGL----PVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp ETTE----EEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred CCCc----cccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 5211 11122333333 34778899998654444444899999999987 533221100011123346778999985
Q ss_pred CCcEEEEecCCCcEEEEEccCCc-cc--eEEEe----cc--cCCeeEEEEccCCCEEE-EeeCCCeEEEEECC--CCc--
Q 016974 218 NSRMFVSGSCDSTARLWDTRVAS-RA--VRTFH----GH--EGDVNTVKFFPDGNRFG-TGSDDGTCRLFDIR--TGH-- 283 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~-~~--~~~~~----~h--~~~v~~v~~sp~g~~l~-s~s~D~~i~iwd~~--~~~-- 283 (379)
+..+++++..++.|++||+.... .. ..... ++ ...+..++|+|+|++|+ ++..|+.|.+||+. ++.
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 44455667789999999985321 11 22222 11 23466899999998876 45579999999998 322
Q ss_pred eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEEe--CCCceEEEecccccCCccCceeEEEECCCCC
Q 016974 284 QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVWD--TLLAKVVLNLGSLQNSHEGRITCLGLSADGS 356 (379)
Q Consensus 284 ~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd--~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~ 356 (379)
.+..+.. . ..+..++|+|+|++|++++ .++.|.+|+ ..+++... +... ... ....+++|.|+.+
T Consensus 269 ~~~~~~~---~---~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~-~~~~-~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 269 KEGFQPT---E---TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHE-KGRY-AVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEEC---S---SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEE-EEEE-ECS-SSCCEEEEEEEC-
T ss_pred EeeeecC---C---CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeE-cccc-ccC-CCCeeEEEEcccC
Confidence 2222211 1 1267899999999988887 689999995 44544321 1111 111 2346777876544
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=9.6e-22 Score=183.17 Aligned_cols=250 Identities=12% Similarity=0.110 Sum_probs=171.6
Q ss_pred cccEEEEEeeCCCCeEEEEcCCCcEEEEECCCC----------ceeeE-----eecCCcceEEEEECCCCCEEE----Ee
Q 016974 67 AGKVYSLDWTSERNRIVSASQDGRLIVWNALTS----------QKTHA-----IKLPCAWVMTCAFSPTGQSVA----CG 127 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~----------~~~~~-----~~~~~~~v~~~~~s~~g~~l~----~~ 127 (379)
...++.+++++++.+|++++.|+ +++|+.... ..... ...+...|.+++|+|+|++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999999998 999875211 01100 011335699999999999999 89
Q ss_pred eCCCcEEEEEcCCCCC----CCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCcccc
Q 016974 128 GLDSVCSIFNLNSPTD----KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQS 203 (379)
Q Consensus 128 ~~d~~i~iw~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 203 (379)
+.|+.|+|||+..... ..........+.+|...|.+++|+|+.+.+|++++.|++|++||++++...... .
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-----~ 189 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-----L 189 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-----E
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-----c
Confidence 9999999999864310 001111245567899999999999986678999999999999999987544332 4
Q ss_pred CCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecc-------cCCeeEEEEccCCCEEEEee-CCC---
Q 016974 204 GHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGH-------EGDVNTVKFFPDGNRFGTGS-DDG--- 272 (379)
Q Consensus 204 ~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h-------~~~v~~v~~sp~g~~l~s~s-~D~--- 272 (379)
+|...+.+++|++ ++++|++|+.||.|++||.+ . .....+..| ...|.+++|++++.++++.+ .||
T Consensus 190 ~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~-~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 190 PSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-L-QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp CGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-C-CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred CCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-C-cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 5788999999997 57889999999999999987 2 334444433 33799999999988775543 443
Q ss_pred ---eEEEEECCCCce--eEEEeeccCC-----CCCCCeEEEEEccCCCEEEEEEe-cCcEEEEe
Q 016974 273 ---TCRLFDIRTGHQ--LQVYYQQHGE-----NEIPHVTSIAFSISGRLLFAGYS-NGDCYVWD 325 (379)
Q Consensus 273 ---~i~iwd~~~~~~--~~~~~~~~~~-----~~~~~v~~~~fs~~g~~l~sg~~-dg~i~iwd 325 (379)
.+++|++++.+. ...+...... ....+-..+.+-++.+++++++. .+.|.+..
T Consensus 267 ~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 267 TSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILA 330 (434)
T ss_dssp SCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEE
T ss_pred CCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEE
Confidence 389999986521 1111111110 11112223344477777776654 33455554
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2.1e-22 Score=199.84 Aligned_cols=284 Identities=11% Similarity=0.036 Sum_probs=184.4
Q ss_pred eeccccccc---cEEEEEeeCCCCeEEEEcCC---------CcEEEEECCCCceeeEee---cCCcceEEEEECCCCCEE
Q 016974 60 CRTLQGHAG---KVYSLDWTSERNRIVSASQD---------GRLIVWNALTSQKTHAIK---LPCAWVMTCAFSPTGQSV 124 (379)
Q Consensus 60 ~~~l~gH~~---~v~~~~~~~~~~~l~s~s~D---------~~v~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l 124 (379)
...+.+|.. .|.+++|||||++|++++.+ +.+++||+.+++. ..+. .+...+..++|||||+.|
T Consensus 50 ~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 50 TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEE
Confidence 345556654 49999999999999999775 7888999988875 3332 223347788999999999
Q ss_pred EEeeCCCcEEEEEcCCCCCCCCCcceeeeeccccc------------------ceEEEEEecCCCceEEEeeCCC-----
Q 016974 125 ACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKG------------------YVSCCQYVPDEDTHLITSSGDQ----- 181 (379)
Q Consensus 125 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~~l~s~~~d~----- 181 (379)
+.++. +.+.+|++.... ..+....+.. .+.++.|+|++ +.|++++.|+
T Consensus 129 a~~~~-~~i~~~~~~~g~-------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~ 199 (723)
T 1xfd_A 129 IFIFE-NNIYYCAHVGKQ-------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPI 199 (723)
T ss_dssp EEEET-TEEEEESSSSSC-------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCE
T ss_pred EEEEC-CeEEEEECCCCc-------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccce
Confidence 99886 789999987532 1122222222 23789999986 4677665442
Q ss_pred -----------------------------eEEEeecCCCeeEEEecCc-cccCCccCeEEEEEeCCCCcEEEEec----C
Q 016974 182 -----------------------------TCVLWDITTGLRTSVFGGE-FQSGHTADVLSVSISGSNSRMFVSGS----C 227 (379)
Q Consensus 182 -----------------------------~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sg~----~ 227 (379)
.|.+||+.++.....+... ....+...+..+.|+| +++++++.+ .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~ 278 (723)
T 1xfd_A 200 MELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQN 278 (723)
T ss_dssp EEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSC
T ss_pred EEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCC
Confidence 7899999887643333210 0112356788999998 666776553 2
Q ss_pred CCcEEEEEccCCccceEEEec-ccCCee----EEEEccCCCEEEEe--eCCC------eEEEEE-CCCCce--eEEEeec
Q 016974 228 DSTARLWDTRVASRAVRTFHG-HEGDVN----TVKFFPDGNRFGTG--SDDG------TCRLFD-IRTGHQ--LQVYYQQ 291 (379)
Q Consensus 228 d~~i~vwd~~~~~~~~~~~~~-h~~~v~----~v~~sp~g~~l~s~--s~D~------~i~iwd-~~~~~~--~~~~~~~ 291 (379)
+..|++||+... +....+.. +...+. .++|+|||+.|+.. ..|+ .|.+|| ..++.. ...+..
T Consensus 279 ~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~- 356 (723)
T 1xfd_A 279 VSILTLCDATTG-VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS- 356 (723)
T ss_dssp EEEEEEEETTTC-CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC-
T ss_pred eEEEEEEeCCCC-cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec-
Confidence 357999998755 33333333 344443 78999999987754 4666 577788 344330 222211
Q ss_pred cCCCCCCCeEE-EEEccCCCEEEEEEec---CcEEEEeCCCce--EEEecccccCCccCceeEEEECCCCCeEEEe
Q 016974 292 HGENEIPHVTS-IAFSISGRLLFAGYSN---GDCYVWDTLLAK--VVLNLGSLQNSHEGRITCLGLSADGSALCTG 361 (379)
Q Consensus 292 ~~~~~~~~v~~-~~fs~~g~~l~sg~~d---g~i~iwd~~~~~--~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~ 361 (379)
....+.. ++|||+|++|+..+.+ +.+++|++.... ....+... ..|...+..++|+|||++|+..
T Consensus 357 ----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 357 ----GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCD-LVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp ----SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTT-SSSSCCCCEEEECTTSSEEEEE
T ss_pred ----CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceeccc-ccCCCCeEEEEECCCCCEEEEE
Confidence 1122444 6999999999776655 789999875321 12222100 0156678899999999988864
No 151
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=4.5e-22 Score=182.57 Aligned_cols=293 Identities=11% Similarity=0.007 Sum_probs=188.6
Q ss_pred EeeccccccccEEE-----EEeeCCCCeEEEEcC-CCc--EEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC
Q 016974 59 CCRTLQGHAGKVYS-----LDWTSERNRIVSASQ-DGR--LIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD 130 (379)
Q Consensus 59 ~~~~l~gH~~~v~~-----~~~~~~~~~l~s~s~-D~~--v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 130 (379)
....|..|...+.. .+|+|||++|+.++. ++. |.+||+.+++.......+...+...+|+|+|+.|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 44567777766665 889999999998887 674 8888988887665555555444467899999999999999
Q ss_pred CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEE--ecCCCceEEE----------------------eeCCCeEEEe
Q 016974 131 SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQY--VPDEDTHLIT----------------------SSGDQTCVLW 186 (379)
Q Consensus 131 ~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s----------------------~~~d~~i~~w 186 (379)
+.+.+||+.... .......+...+....| +|++ ..++. ...+..|.+|
T Consensus 102 ~~l~~~d~~~g~-------~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 102 RNLMRVDLATLE-------ENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp TEEEEEETTTCC-------EEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred CeEEEEECCCCc-------ceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 999999987532 12223334444433333 5654 34442 2355789999
Q ss_pred ecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC------CcEEEEEccCCccceEEEeccc--CCeeEEEE
Q 016974 187 DITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD------STARLWDTRVASRAVRTFHGHE--GDVNTVKF 258 (379)
Q Consensus 187 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d------~~i~vwd~~~~~~~~~~~~~h~--~~v~~v~~ 258 (379)
|+.++...... .+...+..+.++|.+++.++..+.+ ..|.++|.... ....+..+. ..+..++|
T Consensus 174 d~~~g~~~~l~------~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 174 DLKTGESTVIL------QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp ETTTCCEEEEE------EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEE
T ss_pred ECCCCceEEee------cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccccceE
Confidence 99988654433 2345678888997345555554432 36777776532 233343343 25778899
Q ss_pred ccCCCEEEEeeCC-----CeEEEEECCCCceeEEEeeccCCCCC-CCeEEEEEccCCCEEEEE---------EecCcEEE
Q 016974 259 FPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQQHGENEI-PHVTSIAFSISGRLLFAG---------YSNGDCYV 323 (379)
Q Consensus 259 sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~fs~~g~~l~sg---------~~dg~i~i 323 (379)
+|||+.|+..+.+ ..|.+||+.+++........ ...+. .....++|+|||+.|+.. ..+..|++
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 9999988665532 24999999988753322111 10000 001123799999988754 34568999
Q ss_pred EeCCCceEEEecccccCCccC-----------ceeEEEECCCCCeEEEee-CCCcEEEEecC
Q 016974 324 WDTLLAKVVLNLGSLQNSHEG-----------RITCLGLSADGSALCTGS-WDTNLKIWAFG 373 (379)
Q Consensus 324 wd~~~~~~~~~~~~~~~~h~~-----------~v~~~~~s~d~~~l~s~s-~D~~i~vw~~~ 373 (379)
||..+++..... .|.. .+.+++|+|||+.|+.++ .++...||.++
T Consensus 325 ~d~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 325 FNMKNGTQHRVA-----RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp EETTTTEEEEEE-----ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EeccCCceEEec-----cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 998877653322 2222 477889999999888655 57888888654
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=4.9e-21 Score=173.13 Aligned_cols=259 Identities=11% Similarity=0.155 Sum_probs=171.1
Q ss_pred ccccccEEEEEeeCCCCeEEEEcC---CCcEEEEECCCCc--eeeEeecCCcceEEEEECCCCCEEEEee-CCCcEEEEE
Q 016974 64 QGHAGKVYSLDWTSERNRIVSASQ---DGRLIVWNALTSQ--KTHAIKLPCAWVMTCAFSPTGQSVACGG-LDSVCSIFN 137 (379)
Q Consensus 64 ~gH~~~v~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~i~iw~ 137 (379)
..+...+..++|+|+|+ |++++. ++.|++||+.+++ .+..+..+...+..++|+|+|++|++++ .++.+.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34556678899999998 655554 6899999997665 3333344556678899999999888888 678999999
Q ss_pred cCCCCCCCCCcceeeeecc---------cccceEEEEEecCCCceEEEeeCCCeEEEeecC-CCeeEEEecCccccCCcc
Q 016974 138 LNSPTDKDGNLPVSRMLSG---------HKGYVSCCQYVPDEDTHLITSSGDQTCVLWDIT-TGLRTSVFGGEFQSGHTA 207 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~h~~ 207 (379)
+... +.......+.. +...+.+++|+|++. ++++...++.|.+||+. ++....... .......
T Consensus 115 ~~~~----g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~--~~~~~g~ 187 (347)
T 3hfq_A 115 IAAD----GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSV--LTMEAGF 187 (347)
T ss_dssp ECTT----SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEE--EECCTTC
T ss_pred eCCC----CCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeee--EEcCCCC
Confidence 9642 12212221111 123478899999876 77777889999999998 443222111 0111223
Q ss_pred CeEEEEEeCCCCcEEEEecCCCcEEEEEccCC-cc--ceEEEeccc------CCeeEEEEccCCCEE-EEeeCCCeEEEE
Q 016974 208 DVLSVSISGSNSRMFVSGSCDSTARLWDTRVA-SR--AVRTFHGHE------GDVNTVKFFPDGNRF-GTGSDDGTCRLF 277 (379)
Q Consensus 208 ~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~-~~--~~~~~~~h~------~~v~~v~~sp~g~~l-~s~s~D~~i~iw 277 (379)
....++|+|....+++++..++.|.+|++... .. ....+.... ..+..++|+|||++| ++...++.|.+|
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~ 267 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF 267 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE
Confidence 56778999844446666778899999998742 11 122222222 347889999999987 555678999999
Q ss_pred ECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec-CcEEEE--eCCCceEE
Q 016974 278 DIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN-GDCYVW--DTLLAKVV 332 (379)
Q Consensus 278 d~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d-g~i~iw--d~~~~~~~ 332 (379)
++.....+........ +...+..++|+|+|++|++++.+ +.|.+| |..+++..
T Consensus 268 ~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 268 AVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9863222221111111 12236789999999999888754 899999 54555543
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=9.1e-22 Score=183.35 Aligned_cols=228 Identities=14% Similarity=0.075 Sum_probs=161.6
Q ss_pred CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCC---CCCC-cce----eeeecccccc
Q 016974 89 GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTD---KDGN-LPV----SRMLSGHKGY 160 (379)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~---~~~~-~~~----~~~~~~h~~~ 160 (379)
+++++|+... . .+...+..+++++++.++++++.|+ +++|+...-.. .... ... ......|.+.
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 5688887431 1 2233467889999999999999988 88988642110 0000 000 0111235678
Q ss_pred eEEEEEecCCCceEE----EeeCCCeEEEeecCCC--------eeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC
Q 016974 161 VSCCQYVPDEDTHLI----TSSGDQTCVLWDITTG--------LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD 228 (379)
Q Consensus 161 v~~~~~~~~~~~~l~----s~~~d~~i~~wd~~~~--------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 228 (379)
|.+++|+|++ .+|+ +|+.|++|++||+.++ .....+ ....+|...|.+++|+|.++.+|++++.|
T Consensus 95 v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 95 IHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYH--KLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp EEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEE--ECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred ccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeee--eccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 9999999986 5666 8999999999998754 111111 11257899999999998768899999999
Q ss_pred CcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC--CCCCCCeEEEEEc
Q 016974 229 STARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG--ENEIPHVTSIAFS 306 (379)
Q Consensus 229 ~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~fs 306 (379)
|.|++||++.. .......+|...|.+++|+|+|++|++|+.|++|++||++ ++....+..... ..+...|.+++|+
T Consensus 172 g~v~iwD~~~~-~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 172 GSIAVLQVTET-VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp SCEEEEEESSS-EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred CeEEEEEcCCC-cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 99999999866 3444566789999999999999999999999999999998 544443322111 1122368999999
Q ss_pred cCCCEEEEEE-ecC------cEEEEeCCCc
Q 016974 307 ISGRLLFAGY-SNG------DCYVWDTLLA 329 (379)
Q Consensus 307 ~~g~~l~sg~-~dg------~i~iwd~~~~ 329 (379)
+++.++++.+ .|| .+++|++...
T Consensus 250 ~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 250 GTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9998876543 443 3899997643
No 154
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=4.2e-20 Score=166.93 Aligned_cols=249 Identities=10% Similarity=0.054 Sum_probs=178.4
Q ss_pred cceEEEEECCCCCEEEEeeC-------CCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCe
Q 016974 110 AWVMTCAFSPTGQSVACGGL-------DSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQT 182 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 182 (379)
..+..++|+|+|+++++++. ++.+.+||..+.. ....+.. ...+..+.|+|++...+++...++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~-------~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE-------VTQAIHN-DLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC-------EEEEEEE-SSCCCSEEEETTTTEEEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe-------EEEEEec-CCCcceEEECCCCCEEEEEecCCCE
Confidence 34678999999998888774 5679999876432 2222222 2335678899987666777778899
Q ss_pred EEEeecCCCeeEEEecCcccc----CCccCeEEEEEeCCCCcEEEEe-cCCCcEEEEEccCCccceEEEecccCCeeEEE
Q 016974 183 CVLWDITTGLRTSVFGGEFQS----GHTADVLSVSISGSNSRMFVSG-SCDSTARLWDTRVASRAVRTFHGHEGDVNTVK 257 (379)
Q Consensus 183 i~~wd~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~l~sg-~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~ 257 (379)
|.+||+.++.....+...... .....+..+.+++.+..+++++ +.++.|.+||.... +....+..+...+.+++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI-KLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT-EEEEEECCCCTTCCCCE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC-ceEEEecCCCCccceEE
Confidence 999999988765554321000 0011267789998555455554 45889999999755 45566654566689999
Q ss_pred EccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEe-cCcEEEEeCCCceEEEecc
Q 016974 258 FFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYS-NGDCYVWDTLLAKVVLNLG 336 (379)
Q Consensus 258 ~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~-dg~i~iwd~~~~~~~~~~~ 336 (379)
|+|+|+++++++.++.|.+||+.+++.+..+... .......+..++|+|+|+++++++. ++.|++||..+++....+.
T Consensus 192 ~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 192 LDSEGKRLYTTNADGELITIDTADNKILSRKKLL-DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EETTTTEEEEECTTSEEEEEETTTTEEEEEEECC-CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC-CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9999999999999999999999998876655331 1122345788999999998877765 4899999998887766553
Q ss_pred cccCCccCceeEEEECCCCCeEEEee-CCCcEEEEecCc
Q 016974 337 SLQNSHEGRITCLGLSADGSALCTGS-WDTNLKIWAFGG 374 (379)
Q Consensus 337 ~~~~~h~~~v~~~~~s~d~~~l~s~s-~D~~i~vw~~~~ 374 (379)
. +. ..+++|+|||++|+.++ .+++|.+|+...
T Consensus 271 ~----~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 271 A----PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp C----SS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred c----CC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 1 11 25689999999666555 699999999865
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.4e-20 Score=169.76 Aligned_cols=276 Identities=10% Similarity=0.073 Sum_probs=178.3
Q ss_pred EEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCC-cceEEEEECCCCCEEE-EeeCCCcEEEEEcCCCCCCCCCcc
Q 016974 72 SLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPC-AWVMTCAFSPTGQSVA-CGGLDSVCSIFNLNSPTDKDGNLP 149 (379)
Q Consensus 72 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~-~~~~d~~i~iw~~~~~~~~~~~~~ 149 (379)
.+++++++.++++++.|++|++||..+++....+..+. ..+..++|+|+|++++ +...++.+.+||+.+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~------- 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK------- 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE-------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc-------
Confidence 35678888899999999999999999998888777654 1467899999998654 55678999999986532
Q ss_pred eeeeec-cc-----ccceEEEEEecCCCceEEEeeCC------------CeEEEeecCCCeeEEEecCccccCCccCeEE
Q 016974 150 VSRMLS-GH-----KGYVSCCQYVPDEDTHLITSSGD------------QTCVLWDITTGLRTSVFGGEFQSGHTADVLS 211 (379)
Q Consensus 150 ~~~~~~-~h-----~~~v~~~~~~~~~~~~l~s~~~d------------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
....+. ++ ...+..++|+|++ ..|++++.+ +.|.+||+.++....... . ..+...+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~--~~~~~~~~~ 152 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR-T--FPMPRQVYL 152 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE-E--EECCSSCCC
T ss_pred EEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCccccceee-e--ccCCCcccc
Confidence 112222 22 2236778999986 456666654 899999998743211110 0 112235777
Q ss_pred EEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEeccc-C-----------------------CeeEEEEccCCCEEEE
Q 016974 212 VSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHE-G-----------------------DVNTVKFFPDGNRFGT 267 (379)
Q Consensus 212 ~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~-~-----------------------~v~~v~~sp~g~~l~s 267 (379)
+++++ ++++++ ++. .|.+||.... +....+..+. . ....+++++++.....
T Consensus 153 ~~~s~-dg~l~~-~~~--~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 227 (349)
T 1jmx_B 153 MRAAD-DGSLYV-AGP--DIYKMDVKTG-KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPA 227 (349)
T ss_dssp EEECT-TSCEEE-ESS--SEEEECTTTC-CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------C
T ss_pred eeECC-CCcEEE-ccC--cEEEEeCCCC-ceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcc
Confidence 88887 445554 433 4999998755 3444443221 0 2345666665422111
Q ss_pred eeCC-CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEcc-CCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCc
Q 016974 268 GSDD-GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSI-SGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGR 345 (379)
Q Consensus 268 ~s~D-~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~-~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~ 345 (379)
.... ..+..+|..+++....-... ....+..++|+| +|++++++ ++.|++||+.+++....+. ....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-----~~~~ 296 (349)
T 1jmx_B 228 TADLLYGYLSVDLKTGKTHTQEFAD----LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-----LDHT 296 (349)
T ss_dssp CCEEEEEEEEEETTTCCEEEEEEEE----CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-----CSSC
T ss_pred ccccceeEEEEeccCCcEEeccccc----CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-----CCCC
Confidence 1111 11222555544322111111 123478999999 99999988 8899999998888765542 1234
Q ss_pred eeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 346 ITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 346 v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+.+++|+|||+.|++++.|+.|++|+...
T Consensus 297 ~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 297 YYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp CCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 67899999999999999999999999875
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=1.4e-20 Score=168.86 Aligned_cols=242 Identities=12% Similarity=0.079 Sum_probs=172.6
Q ss_pred cEEEEEeeCCCCeE-EEEcCCCcEEEEECCCCceeeEeecCC-----cceEEEEECCCCCEEEEee------------CC
Q 016974 69 KVYSLDWTSERNRI-VSASQDGRLIVWNALTSQKTHAIKLPC-----AWVMTCAFSPTGQSVACGG------------LD 130 (379)
Q Consensus 69 ~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~s~~g~~l~~~~------------~d 130 (379)
.+.+++|+|+++.+ ++++.++.|.+||+.+++....+.... ..+..++|+|+|+++++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 37789999999765 566778999999999998877766432 1456789999999998886 57
Q ss_pred CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeE
Q 016974 131 SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVL 210 (379)
Q Consensus 131 ~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
+.+.+||+.... ....+.. ...+..+.|+|++. .|+++ ++.|.+||+.++.....+... .+...+
T Consensus 115 ~~i~v~d~~~~~-------~~~~~~~-~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~---~~~~~~- 179 (337)
T 1pby_B 115 TRVALYDAETLS-------RRKAFEA-PRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQ---SWEAET- 179 (337)
T ss_dssp CEEEEEETTTTE-------EEEEEEC-CSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECST---TTTTTT-
T ss_pred ceEEEEECCCCc-------EEEEEeC-CCCcceeEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeecc---ccCCCc-
Confidence 999999986421 2222222 23466788999864 45555 689999999988766554321 101111
Q ss_pred EEEEeCCCCcEEEEecCCC-----------------------cEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEE
Q 016974 211 SVSISGSNSRMFVSGSCDS-----------------------TARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGT 267 (379)
Q Consensus 211 ~~~~~~~~~~~l~sg~~d~-----------------------~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s 267 (379)
.+++.+..+++++..++ .|.+||..........+..+...+.+++|+|+|+++++
T Consensus 180 --~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 180 --YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp --BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred --eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEE
Confidence 34443333333333333 46899988654333345566677889999999999988
Q ss_pred eeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEec
Q 016974 268 GSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNL 335 (379)
Q Consensus 268 ~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~ 335 (379)
+ ++.|.+||+.+++.+..+... ..+.+++|+|+|++|++++.++.|++||..+++.+..+
T Consensus 258 ~--~~~v~~~d~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 258 A--YNVLESFDLEKNASIKRVPLP------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp E--ESEEEEEETTTTEEEEEEECS------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred e--CCeEEEEECCCCcCcceecCC------CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 8 789999999988776655321 23678999999999999989999999999888776655
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=2.1e-21 Score=188.09 Aligned_cols=230 Identities=10% Similarity=0.008 Sum_probs=164.0
Q ss_pred cceEEEEECCCCCEEEEeeC-CCcEEEEEcCCCCCCCCCcceeeeecccc-cceEEEEEecCCCceEEEeeC---CCeEE
Q 016974 110 AWVMTCAFSPTGQSVACGGL-DSVCSIFNLNSPTDKDGNLPVSRMLSGHK-GYVSCCQYVPDEDTHLITSSG---DQTCV 184 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~---d~~i~ 184 (379)
.++.+++|+|||+.||.++. |++++||+++.. ....+..|. ..+..+.|+|+ ..+++++. +....
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--------~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~ 91 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--------ETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHA 91 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETT--------EEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEE
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCC--------CcEeeecccccccccccCCCC--eEEEEeccCCCCcceE
Confidence 46899999999999999887 999999998532 123344454 57889999986 56666664 55566
Q ss_pred EeecCC---CeeEEEecCccccCCccCeEEEEEeCCCCc-EEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEcc
Q 016974 185 LWDITT---GLRTSVFGGEFQSGHTADVLSVSISGSNSR-MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP 260 (379)
Q Consensus 185 ~wd~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp 260 (379)
+|.+.. +... .+. ..+ .....++++.... ++++++.++ +.+||+... +.. .+..+.. .+++|||
T Consensus 92 l~~~~~~~~g~~~-~l~----~~~--~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g-~~~-~l~~~~~--~~~~~sp 159 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ-RLE----AVK--PMRILSGVDTGEAVVFTGATEDR-VALYALDGG-GLR-ELARLPG--FGFVSDI 159 (582)
T ss_dssp EEEEETTSTTCCE-ECT----TSC--SBEEEEEEECSSCEEEEEECSSC-EEEEEEETT-EEE-EEEEESS--CEEEEEE
T ss_pred EEEEeccCCCccc-ccc----CCC--CceeeeeCCCCCeEEEEecCCCC-ceEEEccCC-cEE-EeecCCC--ceEEECC
Confidence 765533 2211 111 111 2224455554433 455555554 559998754 333 3333333 8899999
Q ss_pred CCCEEEEeeCC----CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC--cEEEEeCCCceEEEe
Q 016974 261 DGNRFGTGSDD----GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG--DCYVWDTLLAKVVLN 334 (379)
Q Consensus 261 ~g~~l~s~s~D----~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg--~i~iwd~~~~~~~~~ 334 (379)
||++|++++.| +.|++||+.+++... +.. +...+..++|||||++|+++..++ .|++||..+++.. .
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~-----~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~ 232 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLRV-FDS-----GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D 232 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCEE-ECC-----SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCceE-eec-----CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E
Confidence 99999988877 789999998877543 211 234578999999999999888888 8999999887765 4
Q ss_pred cccccCCccCceeEEE--------ECCCCCeEEEeeCCCcEEEEec
Q 016974 335 LGSLQNSHEGRITCLG--------LSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 335 ~~~~~~~h~~~v~~~~--------~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
+ ..|...+..++ |+|||.++++++.|++++||++
T Consensus 233 ~----~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 233 L----ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp C----CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred c----cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 3 45666777777 9999999999999999999998
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=2.8e-19 Score=162.50 Aligned_cols=277 Identities=10% Similarity=0.094 Sum_probs=174.4
Q ss_pred ccccEEEEEeeCCCCeEEEEcCC----CcEEEEECCC--Cce--eeEeecCCcceEEEEECCCCCEEEEee-CCCcEEEE
Q 016974 66 HAGKVYSLDWTSERNRIVSASQD----GRLIVWNALT--SQK--THAIKLPCAWVMTCAFSPTGQSVACGG-LDSVCSIF 136 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D----~~v~iwd~~~--~~~--~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~i~iw 136 (379)
|...+..++|+|++++|++++.+ +.|.+|++.. ++. +.....+......+++ +|++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66677889999999999998886 7999998765 332 2333334445666777 888777776 57899999
Q ss_pred EcCCCCCCCCCcceeeeec--------ccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCee------EEEe--cCc
Q 016974 137 NLNSPTDKDGNLPVSRMLS--------GHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLR------TSVF--GGE 200 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------~~~~--~~~ 200 (379)
++....... ......... .+...+.+++|+|++...+++...++.|.+|++..... +... ...
T Consensus 126 ~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 126 PIGQDGALL-PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EBCTTSCBC-SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EeCCCCcCc-ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 997532110 000000011 12234578999998755566666789999998875331 1000 000
Q ss_pred cccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc-ceEEEe---cccCCeeEEEEccCCCEEEEeeC--CCeE
Q 016974 201 FQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASR-AVRTFH---GHEGDVNTVKFFPDGNRFGTGSD--DGTC 274 (379)
Q Consensus 201 ~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~-~~~~~~---~h~~~v~~v~~sp~g~~l~s~s~--D~~i 274 (379)
....+......++|+|....+++++..++.|.+||+..... .+..+. .+......++|+|||++|+++.. ++.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 11233455678999974433445555789999999874311 122222 22344679999999999866655 4899
Q ss_pred EEEECC--CCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEE--eCCCceEEEecccccCCccCceeEE
Q 016974 275 RLFDIR--TGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVW--DTLLAKVVLNLGSLQNSHEGRITCL 349 (379)
Q Consensus 275 ~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iw--d~~~~~~~~~~~~~~~~h~~~v~~~ 349 (379)
.+|++. +++......... ...+..++|+|+|++|+++. .++.|.+| |..+++...... ..+...+.|+
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~----g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~---~~~~~~p~~v 357 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT----GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK---DIKVDKPVCL 357 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC----SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC---CEECSSEEEE
T ss_pred EEEEEcCCCCcEEEeeEecC----CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce---eeeCCCCeEE
Confidence 999985 344221111111 12467899999999998887 66889996 445665543321 2244568899
Q ss_pred EEC
Q 016974 350 GLS 352 (379)
Q Consensus 350 ~~s 352 (379)
.|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 885
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=5.7e-22 Score=196.77 Aligned_cols=280 Identities=11% Similarity=0.061 Sum_probs=184.5
Q ss_pred EEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCc---ceEEEEECCCCCEEEEeeC---------CCcEEEEEcC
Q 016974 72 SLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCA---WVMTCAFSPTGQSVACGGL---------DSVCSIFNLN 139 (379)
Q Consensus 72 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~s~~g~~l~~~~~---------d~~i~iw~~~ 139 (379)
+++|+|+++++++ +.|++|++||+.+++....+..+.. .+.+++|||||++|++++. ++.+++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965555 4699999999999887666554432 3789999999999999876 7899999987
Q ss_pred CCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCc----cccCCcc--------
Q 016974 140 SPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE----FQSGHTA-------- 207 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~----~~~~h~~-------- 207 (379)
..... ....+ ...+..++|+|++ +.|+.+. ++.|++||+.++......... ...++..
T Consensus 99 ~g~~~-----~~~~l---~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 99 NGEFV-----RGNEL---PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML 168 (719)
T ss_dssp TTEEC-----CSSCC---CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred CCccc-----cceec---CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence 53210 00111 2357788999987 4577664 789999999887654322110 0011111
Q ss_pred -CeEEEEEeCCCCcEEEEecCCC----------------------------------cEEEEEccCCccc--eE-----E
Q 016974 208 -DVLSVSISGSNSRMFVSGSCDS----------------------------------TARLWDTRVASRA--VR-----T 245 (379)
Q Consensus 208 -~v~~~~~~~~~~~~l~sg~~d~----------------------------------~i~vwd~~~~~~~--~~-----~ 245 (379)
...++.|+| +++.|++++.|. .|++||+...... +. .
T Consensus 169 ~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 169 ATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp CSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred cCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 114788997 677787776542 7889998754221 11 1
Q ss_pred EecccCCeeEEEEccCCCEEEEeeCC----CeEEEEE----CCCCceeEEEe---eccCCCCCCCeE-----EEEEccCC
Q 016974 246 FHGHEGDVNTVKFFPDGNRFGTGSDD----GTCRLFD----IRTGHQLQVYY---QQHGENEIPHVT-----SIAFSISG 309 (379)
Q Consensus 246 ~~~h~~~v~~v~~sp~g~~l~s~s~D----~~i~iwd----~~~~~~~~~~~---~~~~~~~~~~v~-----~~~fs~~g 309 (379)
+.+|...+.+++|+||++++++.... ..|.+|| +.+++...... .. +...+. .+.|+|||
T Consensus 248 ~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES----RTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp HHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC----SSSCSSSSSCCCCEECTTS
T ss_pred CCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc----CCceEccccCCccEECCCC
Confidence 23577789999999998777764432 2488899 77665432221 11 122333 67899999
Q ss_pred CEEEE--EEecC--cEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCC-----CcEEEEecC
Q 016974 310 RLLFA--GYSNG--DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD-----TNLKIWAFG 373 (379)
Q Consensus 310 ~~l~s--g~~dg--~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D-----~~i~vw~~~ 373 (379)
+.|+. +..+| .|++||...++. ..+ ..+...|..+.++ +++.|+..+.+ +.+++|.+.
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~~-~~l----t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVENA-IQI----TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTTC-EEC----SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CeEEEEEEccCCceEEEEEECCCCce-Eec----ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 96554 44455 577778766552 233 2345567777777 88877766665 889999864
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=5.7e-19 Score=160.89 Aligned_cols=277 Identities=10% Similarity=0.052 Sum_probs=170.3
Q ss_pred CcEEEEEC--CCCceeeE--ee-cCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEE
Q 016974 89 GRLIVWNA--LTSQKTHA--IK-LPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSC 163 (379)
Q Consensus 89 ~~v~iwd~--~~~~~~~~--~~-~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~ 163 (379)
+.|.+|++ .+++.... .. .....+..++|+|+|++|++++.+ .+.+|++.. .++.........+ +.+..
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~----~g~~~~~~~~~~~-g~~~~ 87 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKS----PTEIVHEASHPIG-GHPRA 87 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEE----TTEEEEEEEEECC-SSGGG
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECC----CCCEEEeeEeecC-CCCcc
Confidence 45766654 44543221 11 122356789999999999999988 999999862 1121111111111 22344
Q ss_pred EEEecCCCc-eEEEee-------------CCCeEEEeecCC-CeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe-cC
Q 016974 164 CQYVPDEDT-HLITSS-------------GDQTCVLWDITT-GLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG-SC 227 (379)
Q Consensus 164 ~~~~~~~~~-~l~s~~-------------~d~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg-~~ 227 (379)
++|+|++.. +++++. .++++.+|++.. +.....+.. ....+...+..+.++| ++++++++ ..
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~sp-dG~~l~~~~~~ 165 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN-YEYQENTGIHGMVFDP-TETYLYSADLT 165 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE-EECCTTCCEEEEEECT-TSSEEEEEETT
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee-EEeCCCCcceEEEECC-CCCEEEEEcCC
Confidence 678887643 344553 689999999973 443322210 0012445688899997 55555554 44
Q ss_pred CCcEEEEEcc-CCcc-ceEEEe--cccCCeeEEEEccCCCEEEEeeC-CCeEEEEECC--CCceeE---EEeec-cC-CC
Q 016974 228 DSTARLWDTR-VASR-AVRTFH--GHEGDVNTVKFFPDGNRFGTGSD-DGTCRLFDIR--TGHQLQ---VYYQQ-HG-EN 295 (379)
Q Consensus 228 d~~i~vwd~~-~~~~-~~~~~~--~h~~~v~~v~~sp~g~~l~s~s~-D~~i~iwd~~--~~~~~~---~~~~~-~~-~~ 295 (379)
++.|++||+. .... .+..+. .|...+..++|+|||+++++++. ++.|.+|++. +++... .+... .+ ..
T Consensus 166 ~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g 245 (365)
T 1jof_A 166 ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPD 245 (365)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCC
T ss_pred CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCC
Confidence 6799999987 3321 122333 23566899999999999887774 7899999764 454321 11111 00 01
Q ss_pred CCC------CeEEEE-EccCCCEEEEEEecC------cEEEEeCC-CceEEEecccccCCccCceeEEEECC---CCCeE
Q 016974 296 EIP------HVTSIA-FSISGRLLFAGYSNG------DCYVWDTL-LAKVVLNLGSLQNSHEGRITCLGLSA---DGSAL 358 (379)
Q Consensus 296 ~~~------~v~~~~-fs~~g~~l~sg~~dg------~i~iwd~~-~~~~~~~~~~~~~~h~~~v~~~~~s~---d~~~l 358 (379)
+.. .+..++ |+|||++|+++..+. .|.+|++. +++...... ....+...+..++|+| ||++|
T Consensus 246 ~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~-~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 246 RDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF-LSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp BCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE-EEECSSCCTTCCCEEECTTCTTEE
T ss_pred cccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeee-eeecCCCCcccceecCCCcCCCEE
Confidence 111 478999 999999988776433 79999985 454332110 0012333456788999 89999
Q ss_pred EEeeCC-CcEEEEecCc
Q 016974 359 CTGSWD-TNLKIWAFGG 374 (379)
Q Consensus 359 ~s~s~D-~~i~vw~~~~ 374 (379)
++++.+ ++|++|+++.
T Consensus 325 ~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 325 AITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EEECSSSCEEEEEEEET
T ss_pred EEEEcCCCeEEEEEEch
Confidence 998875 8999998764
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=3.4e-20 Score=183.99 Aligned_cols=300 Identities=10% Similarity=0.011 Sum_probs=189.2
Q ss_pred ccccccc---cEEEEEeeCCCCeEEEEcC---------CCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeC
Q 016974 62 TLQGHAG---KVYSLDWTSERNRIVSASQ---------DGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 129 (379)
Q Consensus 62 ~l~gH~~---~v~~~~~~~~~~~l~s~s~---------D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 129 (379)
.+.+|.. .|.+++|||||++|++++. |++|++||+.+++....... ...+..++|||||+.|+.+.
T Consensus 51 ~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~- 128 (719)
T 1z68_A 51 ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY- 128 (719)
T ss_dssp EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE-
T ss_pred EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE-
Confidence 3444443 3899999999999998876 79999999998876311122 24578899999999999986
Q ss_pred CCcEEEEEcCCCCCCCCC--cceeeeecccccce---------EEEEEecCCCceEEEeeCCC-----------------
Q 016974 130 DSVCSIFNLNSPTDKDGN--LPVSRMLSGHKGYV---------SCCQYVPDEDTHLITSSGDQ----------------- 181 (379)
Q Consensus 130 d~~i~iw~~~~~~~~~~~--~~~~~~~~~h~~~v---------~~~~~~~~~~~~l~s~~~d~----------------- 181 (379)
|+.|++|++.......-. -.....+.||...| .++.|+|++ ..|++++.|.
T Consensus 129 ~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~ 207 (719)
T 1z68_A 129 QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYP 207 (719)
T ss_dssp TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSC
T ss_pred CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCc
Confidence 779999998753211000 00000122332222 478999986 5677776542
Q ss_pred -----------------eEEEeecCCCeeE---EEecCccccCCccCeEEEEEeCCCCcEEEEecCC----CcEEEEE--
Q 016974 182 -----------------TCVLWDITTGLRT---SVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD----STARLWD-- 235 (379)
Q Consensus 182 -----------------~i~~wd~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d----~~i~vwd-- 235 (379)
.|.+||+.++... .........+|...+.+++|+|. ++++++.... ..|.+||
T Consensus 208 ~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~ 286 (719)
T 1z68_A 208 RTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFR 286 (719)
T ss_dssp EEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEEC
T ss_pred cceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEccc
Confidence 7889999876531 11100111357778899999985 7777764322 2488888
Q ss_pred --ccCCccceEEE----ecccCCee-----EEEEccCCCEEEE--eeCCC--eEEEEECCCCceeEEEeeccCCCCCCCe
Q 016974 236 --TRVASRAVRTF----HGHEGDVN-----TVKFFPDGNRFGT--GSDDG--TCRLFDIRTGHQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 236 --~~~~~~~~~~~----~~h~~~v~-----~v~~sp~g~~l~s--~s~D~--~i~iwd~~~~~~~~~~~~~~~~~~~~~v 300 (379)
.... +....+ .+|...+. .+.|+|||+.|+. ...++ .|.+||+.+++.. .+.. ....+
T Consensus 287 ~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~-~lt~-----~~~~v 359 (719)
T 1z68_A 287 EDWQTW-DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI-QITS-----GKWEA 359 (719)
T ss_dssp SSSSSE-ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCE-ECSC-----SSSCE
T ss_pred CCCCCC-ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceE-eccc-----CceEE
Confidence 5533 222222 46777777 8999999996554 44555 5777888766532 2211 12246
Q ss_pred EEEEEccCCCEEEEEEec-----CcEEEEeCCC--ce-EEEecccccCCccCceeEEEECCCCCeEEE-eeCC--CcEEE
Q 016974 301 TSIAFSISGRLLFAGYSN-----GDCYVWDTLL--AK-VVLNLGSLQNSHEGRITCLGLSADGSALCT-GSWD--TNLKI 369 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~~d-----g~i~iwd~~~--~~-~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s-~s~D--~~i~v 369 (379)
..+.++ +|+.|+..+.+ +..++|.+.. +. ....+.....+|...+..+.|+||++.++. ++.+ ..+++
T Consensus 360 ~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l 438 (719)
T 1z68_A 360 INIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTL 438 (719)
T ss_dssp EEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEE
T ss_pred EEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEE
Confidence 777777 88877776654 7888997643 31 112221111235667888999999988774 4443 46788
Q ss_pred EecC
Q 016974 370 WAFG 373 (379)
Q Consensus 370 w~~~ 373 (379)
|++.
T Consensus 439 ~d~~ 442 (719)
T 1z68_A 439 HDGR 442 (719)
T ss_dssp ECSS
T ss_pred EECC
Confidence 8764
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=6.1e-20 Score=168.55 Aligned_cols=275 Identities=13% Similarity=0.023 Sum_probs=173.9
Q ss_pred EEEEEeeCCCCeEEEEcCC---CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCC
Q 016974 70 VYSLDWTSERNRIVSASQD---GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
+.+++|+|||++|+.++.+ ..|.+||..+++..............+.|+|+|+.|+.++.++.+.+|++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~---- 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE---- 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC----
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC----
Confidence 6788999999998776443 368888988776433322222222236799999999999999999999987532
Q ss_pred CcceeeeecccccceEE-------------------EEEecCCCceEEEe-----eCCCeEEEeecCCCeeEEEecCccc
Q 016974 147 NLPVSRMLSGHKGYVSC-------------------CQYVPDEDTHLITS-----SGDQTCVLWDITTGLRTSVFGGEFQ 202 (379)
Q Consensus 147 ~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~l~s~-----~~d~~i~~wd~~~~~~~~~~~~~~~ 202 (379)
.......+.+.... +.|+|++. .++.. ..+..|.+||+.++......
T Consensus 114 ---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~----- 184 (396)
T 3c5m_A 114 ---EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDIETGELEVIH----- 184 (396)
T ss_dssp ---EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEETTTCCEEEEE-----
T ss_pred ---cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcceEEEEECCCCcEEeec-----
Confidence 11112222222211 23556543 33322 46778999999887654433
Q ss_pred cCCccCeEEEEEeCCCCcEEEEecCC------CcEEEEEccCCccceEEEecc--cCCeeEEEEccCCCEEEEeeCC---
Q 016974 203 SGHTADVLSVSISGSNSRMFVSGSCD------STARLWDTRVASRAVRTFHGH--EGDVNTVKFFPDGNRFGTGSDD--- 271 (379)
Q Consensus 203 ~~h~~~v~~~~~~~~~~~~l~sg~~d------~~i~vwd~~~~~~~~~~~~~h--~~~v~~v~~sp~g~~l~s~s~D--- 271 (379)
.+...+..+.|+|.++..++..+.+ ..|.+||+... . ...+..+ ...+..++|+|||++|+.++.+
T Consensus 185 -~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 185 -QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-N-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp -EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-C-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred -cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-c-eeEeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 2345678888987344444443333 46888887533 2 2223222 2257889999999988877654
Q ss_pred --CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEcc-CCCEEEEEE----------------ecCcEEEEeCCCceEE
Q 016974 272 --GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSI-SGRLLFAGY----------------SNGDCYVWDTLLAKVV 332 (379)
Q Consensus 272 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~-~g~~l~sg~----------------~dg~i~iwd~~~~~~~ 332 (379)
+.|.+||+.+++....... . ... +.|+| +|++++.+. .++.|++||..+++..
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~---~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVMVM---P----PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp CCEEEEEECTTTCCEEEEEEC---C----SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred ccceEEEEECCCCCeEEeeeC---C----CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 5599999988765433211 1 133 88999 999888764 2468999998766532
Q ss_pred EecccccCCccC-----------ceeEEEECCCCCeEEEeeC-CCcEEEEecC
Q 016974 333 LNLGSLQNSHEG-----------RITCLGLSADGSALCTGSW-DTNLKIWAFG 373 (379)
Q Consensus 333 ~~~~~~~~~h~~-----------~v~~~~~s~d~~~l~s~s~-D~~i~vw~~~ 373 (379)
. + ..+.. .+..++|+|||+.|+.++. ++...||.++
T Consensus 334 ~-l----~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 334 K-L----CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp E-E----EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred E-c----cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 2 2 11222 2456789999998887665 5666676543
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=6.9e-19 Score=172.90 Aligned_cols=292 Identities=13% Similarity=0.086 Sum_probs=190.6
Q ss_pred eccccccccEEEEEeeCCCCeEEEE--cCCCcEEEEECCCCceeeEeecCCcceE---------EEEEC--CCCCE-EEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSA--SQDGRLIVWNALTSQKTHAIKLPCAWVM---------TCAFS--PTGQS-VAC 126 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~--s~D~~v~iwd~~~~~~~~~~~~~~~~v~---------~~~~s--~~g~~-l~~ 126 (379)
..+.+|...|..++|++++-.+++. +.++...||....+.....+..+...+. ...|+ |||+. |+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 4678899999999999886667777 6689999999655555556655544444 45454 99998 776
Q ss_pred eeC-CCcEEEEEcCCCCCCCCCcceeeeecc-----cccceEEEEEecCCCceEEEeeCC----------CeEEEeecCC
Q 016974 127 GGL-DSVCSIFNLNSPTDKDGNLPVSRMLSG-----HKGYVSCCQYVPDEDTHLITSSGD----------QTCVLWDITT 190 (379)
Q Consensus 127 ~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~~~d----------~~i~~wd~~~ 190 (379)
++. +..|.++++.... .+. ...+.. |...+..++|+|++ +.|++++.+ ..|.+||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g--~~~---~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPG--GAV---PRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EBTTTCCEEEECTTSTT--CCC---CEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EECCCCeEEEEcCCCCC--CCC---CEeccCCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 654 4445555443000 011 122333 66778899999986 467777766 5899999987
Q ss_pred ------CeeEEEecCcccc-CCccCeEEEEEeCCCCcEEEEecCC--------CcEEEEEccCCc---cceEEEecccCC
Q 016974 191 ------GLRTSVFGGEFQS-GHTADVLSVSISGSNSRMFVSGSCD--------STARLWDTRVAS---RAVRTFHGHEGD 252 (379)
Q Consensus 191 ------~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sg~~d--------~~i~vwd~~~~~---~~~~~~~~h~~~ 252 (379)
+... .+ . .+...+..+.++| +++.++.++.+ ..|.+||+.... .......+|...
T Consensus 171 ~~~~~~~~~~-~l-----~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 171 SAAADRSAVR-EL-----SDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp TTTTCGGGSE-ES-----SCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred CccccCCcee-EE-----EecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 5432 22 2 3345667788897 66667666544 379999987322 333344456788
Q ss_pred eeEEEEccCCCEEEEeeCCC--eEEEEECCCCceeEEEeeccCCCC----CCCeEEEEEccCCCEEEEEEecCcEEEE--
Q 016974 253 VNTVKFFPDGNRFGTGSDDG--TCRLFDIRTGHQLQVYYQQHGENE----IPHVTSIAFSISGRLLFAGYSNGDCYVW-- 324 (379)
Q Consensus 253 v~~v~~sp~g~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~~~~----~~~v~~~~fs~~g~~l~sg~~dg~i~iw-- 324 (379)
+..++|+|||++++++..|+ .|.+||+.+++..... ..+.... ...+..++|+|++++++++.. +.++||
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLC-RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESS-CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecc-cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 99999999999888888888 6777777666543322 1111100 011467899999999999988 999999
Q ss_pred eCCCceEEEecccccCCccCceeEE-EECCCCCeEEEeeCCCcEEEEec
Q 016974 325 DTLLAKVVLNLGSLQNSHEGRITCL-GLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 325 d~~~~~~~~~~~~~~~~h~~~v~~~-~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
|...++ ...+ ..|...+..+ +++++.-.+++++.+....||.+
T Consensus 322 d~~~~~-~~~l----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 322 DPESGE-LVDA----AGPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp ETTTTE-EEEC----CSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred ECCCCc-EEEe----cCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 555454 3444 4466677777 55444444556677766666654
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=8.1e-20 Score=181.81 Aligned_cols=285 Identities=12% Similarity=0.086 Sum_probs=182.6
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcc-----eEEEEECCCCCEEEEeeCC---------CcEE
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW-----VMTCAFSPTGQSVACGGLD---------SVCS 134 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~~~d---------~~i~ 134 (379)
...++.|+||+++|+++ |++|++||+.+++....+..+... ....+|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35678999999999886 999999999999887766665432 2347889999999998876 4566
Q ss_pred EEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEec-Cc---cccCCc----
Q 016974 135 IFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG-GE---FQSGHT---- 206 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~~---~~~~h~---- 206 (379)
+||+.+.. ...+..|.+.+...+|+|++. .|+.+ .|+.|.+||+.++....... +. ...++.
T Consensus 96 ~~d~~~~~--------~~~l~~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 96 IYDLNKRQ--------LITEERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEETTTTE--------ECCSSCCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred EEECCCCc--------EEEcccCCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 99987532 123556777899999999874 56666 57899999998775433211 00 001111
Q ss_pred -----cCeEEEEEeCCCCcEEEEecCCC-cEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECC
Q 016974 207 -----ADVLSVSISGSNSRMFVSGSCDS-TARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIR 280 (379)
Q Consensus 207 -----~~v~~~~~~~~~~~~l~sg~~d~-~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~ 280 (379)
.....+.|+| +++.|+.++.|. .+++|++....... ++...+..+.+.+.|.. ..+.+|++||+.
T Consensus 166 ~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~----~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~ 236 (740)
T 4a5s_A 166 EEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDES----LQYPKTVRVPYPKAGAV----NPTVKFFVVNTD 236 (740)
T ss_dssp HHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTT----CSSCEEEEEECCBTTSC----CCEEEEEEEETT
T ss_pred cchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCC----CCCCcceeecCCCCcCc----CCeeEEEEEECC
Confidence 1123478887 667777766554 48888864321110 23445677788777753 223379999999
Q ss_pred C---C---ceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec----CcEEEEeCCCce----EEEecccccCCccCce
Q 016974 281 T---G---HQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN----GDCYVWDTLLAK----VVLNLGSLQNSHEGRI 346 (379)
Q Consensus 281 ~---~---~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d----g~i~iwd~~~~~----~~~~~~~~~~~h~~~v 346 (379)
+ + +............+...+..++|||||+.++..... ..|++||+.+++ ...........|...|
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v 316 (740)
T 4a5s_A 237 SLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWV 316 (740)
T ss_dssp SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCS
T ss_pred CCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceE
Confidence 8 7 332221100000123458899999999977665433 369999987765 1111100012344444
Q ss_pred e-----EEEECCCCCeEE-EeeC-CC--cEEEEecCc
Q 016974 347 T-----CLGLSADGSALC-TGSW-DT--NLKIWAFGG 374 (379)
Q Consensus 347 ~-----~~~~s~d~~~l~-s~s~-D~--~i~vw~~~~ 374 (379)
. .++|+|||+.|+ ..|. || .|++|+..+
T Consensus 317 ~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 317 GRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp SSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred ccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 3 678999999887 6654 44 577777665
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=2.8e-18 Score=154.57 Aligned_cols=240 Identities=14% Similarity=0.062 Sum_probs=161.6
Q ss_pred cEEEEEeeCCCCeE-EEEcCCCcEEEEECCCCceeeEeecCC------cceEEEEECCCCCEEEEeeCC-----------
Q 016974 69 KVYSLDWTSERNRI-VSASQDGRLIVWNALTSQKTHAIKLPC------AWVMTCAFSPTGQSVACGGLD----------- 130 (379)
Q Consensus 69 ~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~------~~v~~~~~s~~g~~l~~~~~d----------- 130 (379)
.+..++|+|+++.+ ++++.++.|.+||+.+++....+..+. ..+..++|+|+|+++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 47789999999865 566788999999999988877776543 226788999999999998865
Q ss_pred -CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCcccc------
Q 016974 131 -SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQS------ 203 (379)
Q Consensus 131 -~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~------ 203 (379)
+.+.+||+.+.... ....... +...+.+++|+|++. ++.++. .|.+||+.++.....+......
T Consensus 124 ~~~i~~~d~~~~~~~----~~~~~~~-~~~~~~~~~~s~dg~--l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 194 (349)
T 1jmx_B 124 PPRLEVFSTADGLEA----KPVRTFP-MPRQVYLMRAADDGS--LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSA 194 (349)
T ss_dssp CCEEEEEEGGGGGGB----CCSEEEE-CCSSCCCEEECTTSC--EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCC
T ss_pred CCeEEEEECCCcccc----ceeeecc-CCCcccceeECCCCc--EEEccC--cEEEEeCCCCceeccccccccCCccccC
Confidence 89999998752210 1112222 233577889999875 444433 4999999888765554321100
Q ss_pred ---------CCcc----CeEEEEEeCCC----------CcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEcc
Q 016974 204 ---------GHTA----DVLSVSISGSN----------SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP 260 (379)
Q Consensus 204 ---------~h~~----~v~~~~~~~~~----------~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp 260 (379)
.... ....+.+.+.. ..++.....++.+++|+. ..+...+..++|+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~sp 264 (349)
T 1jmx_B 195 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF----------ADLTELYFTGLRSP 264 (349)
T ss_dssp CBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE----------EECSSCEEEEEECS
T ss_pred ccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc----------ccCCCcceeeEecC
Confidence 0000 11223333211 011112333444555443 23556788999999
Q ss_pred -CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEec
Q 016974 261 -DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNL 335 (379)
Q Consensus 261 -~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~ 335 (379)
+|++++++ ++.|.+||+.+++.+..+... ..+.+++|+|+|++|++++.++.|++||..+++.+..+
T Consensus 265 ~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 265 KDPNQIYGV--LNRLAKYDLKQRKLIKAANLD------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp SCTTEEEEE--ESEEEEEETTTTEEEEEEECS------SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEE--cCeEEEEECccCeEEEEEcCC------CCccceEECCCCCEEEEecCCCeEEEEeccccceeeee
Confidence 99999888 889999999998776655321 13568999999999988888999999999888776554
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=4.4e-18 Score=155.01 Aligned_cols=252 Identities=12% Similarity=0.049 Sum_probs=162.6
Q ss_pred ccccEEEEEeeCCCCeEEEEcCCCcEEEEECC-CCceeeEeecC-CcceEEEEECCCCCE--EEEee-------------
Q 016974 66 HAGKVYSLDWTSERNRIVSASQDGRLIVWNAL-TSQKTHAIKLP-CAWVMTCAFSPTGQS--VACGG------------- 128 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~-~~~~~~~~~~~-~~~v~~~~~s~~g~~--l~~~~------------- 128 (379)
+...+..++|+|++++|++++.+ +|.+|++. +++........ .+....++|+|+|++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 33457789999999999999888 99999987 67654332211 122445789999994 55654
Q ss_pred CCCcEEEEEcCCCCCCCCCcc-eeeeec-ccccceEEEEEecCCCceEEEe-eCCCeEEEeecC-CCeeEEEecCccccC
Q 016974 129 LDSVCSIFNLNSPTDKDGNLP-VSRMLS-GHKGYVSCCQYVPDEDTHLITS-SGDQTCVLWDIT-TGLRTSVFGGEFQSG 204 (379)
Q Consensus 129 ~d~~i~iw~~~~~~~~~~~~~-~~~~~~-~h~~~v~~~~~~~~~~~~l~s~-~~d~~i~~wd~~-~~~~~~~~~~~~~~~ 204 (379)
.++.+.+|+++.. +... ....+. .+...+.+++|+|++. +|+++ ..++.|.+||+. ++......... ...
T Consensus 117 ~~g~v~v~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~ 190 (365)
T 1jof_A 117 FAGYGNVFSVSET----GKLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTANKLWTHRKLASGEVELVGSVD-APD 190 (365)
T ss_dssp SCCEEEEEEECTT----CCEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTSCEEEEEEEE-CSS
T ss_pred CCceEEEEccCCC----CcCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCCEEEEEEECCCCCEEEeeeEe-cCC
Confidence 6899999999742 1111 111111 2445788999999875 45544 457899999998 66432211100 012
Q ss_pred CccCeEEEEEeCCCCcEEEEec-CCCcEEEEEccCC-ccce---EEEe-------cccC------CeeEEE-EccCCCEE
Q 016974 205 HTADVLSVSISGSNSRMFVSGS-CDSTARLWDTRVA-SRAV---RTFH-------GHEG------DVNTVK-FFPDGNRF 265 (379)
Q Consensus 205 h~~~v~~~~~~~~~~~~l~sg~-~d~~i~vwd~~~~-~~~~---~~~~-------~h~~------~v~~v~-~sp~g~~l 265 (379)
|...+..++|+| +++++++++ .++.|.+|++... .+.. ..+. +|.. .+..++ |+|||++|
T Consensus 191 ~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 191 PGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred CCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 345688899997 555555544 5789999987531 1221 1121 2222 478999 99999988
Q ss_pred EEeeCC-C-----eEEEEECC-CCceeEEE--eeccCCCCCCCeEEEEEcc---CCCEEEEEEec-CcEEEEeCCCc
Q 016974 266 GTGSDD-G-----TCRLFDIR-TGHQLQVY--YQQHGENEIPHVTSIAFSI---SGRLLFAGYSN-GDCYVWDTLLA 329 (379)
Q Consensus 266 ~s~s~D-~-----~i~iwd~~-~~~~~~~~--~~~~~~~~~~~v~~~~fs~---~g~~l~sg~~d-g~i~iwd~~~~ 329 (379)
+++..+ + +|.+|++. +++..... .... ...+..++|+| +|++|+++..+ +.|.+|+....
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~----~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP----TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS----SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC----CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 776543 2 89999986 55533211 1111 11245689999 89999998864 89999987554
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=2.6e-17 Score=147.74 Aligned_cols=250 Identities=12% Similarity=0.144 Sum_probs=181.1
Q ss_pred ccEEEEEeeCCCCeEEEEcCC------------------------CcEEEEECCCCceeeEee-cCCcceEEEEECCCCC
Q 016974 68 GKVYSLDWTSERNRIVSASQD------------------------GRLIVWNALTSQKTHAIK-LPCAWVMTCAFSPTGQ 122 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D------------------------~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~g~ 122 (379)
+.+.+|+++++|+++++.+.+ ++|.+||..+++...... .+......++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 468999999999999988877 479999998888766554 2335678999999999
Q ss_pred EEEEeeCCCcEEEEEcCCCCCCCCCcceeeee---------cccccceEEEEEecCCCceEEEee-CCCeEEEeecCCCe
Q 016974 123 SVACGGLDSVCSIFNLNSPTDKDGNLPVSRML---------SGHKGYVSCCQYVPDEDTHLITSS-GDQTCVLWDITTGL 192 (379)
Q Consensus 123 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~ 192 (379)
++++...++.|++|+.+.... ....+ .++......+++.|+++.++++.+ .++.|++||. ++.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~ 176 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEG------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGK 176 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSC------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSC
T ss_pred EEEEECCCCEEEEEeCCCCeE------EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCC
Confidence 999988899999999754210 11111 234446788999995556677776 6999999994 555
Q ss_pred eEEEecCccc-----cCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEe--cccCCeeEEEEcc-----
Q 016974 193 RTSVFGGEFQ-----SGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH--GHEGDVNTVKFFP----- 260 (379)
Q Consensus 193 ~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~v~~sp----- 260 (379)
....+..... .++......+++++..+.++++...++.|++||.... +.+..+. .+...+..++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEETTEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-cEEEEEeccccCCCcceeeecCCEEEE
Confidence 4444432110 1233447889999865889999999999999998743 4555553 4556788999999
Q ss_pred -CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 261 -DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 261 -~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
+|..+++.+.+.+|++||+.+++.+..+.. .......+..++|+|+|.++++...++.|++|+..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~--~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP--VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECC--SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcC--CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 444333444456899999999987766531 12233457899999999888888889999999853
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=8.5e-18 Score=152.77 Aligned_cols=264 Identities=11% Similarity=0.089 Sum_probs=177.0
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEee----------CCCcEEEEEcCCCCCCCCCcceeeeecc
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGG----------LDSVCSIFNLNSPTDKDGNLPVSRMLSG 156 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 156 (379)
.|++|.+||..+++.+..+..+... .++|+|+|+++++++ .++.|.+||..+.. ....+..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-------~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT-------FEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-------EEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-------EEEEEEc
Confidence 5789999999999988877765444 899999999998886 36789999976422 2222211
Q ss_pred ------cccceEEEEEecCCCceEEEee-C-CCeEEEeecCCCeeEEE-ecCccccCCccCeEEEEEeCCCCcEEEEecC
Q 016974 157 ------HKGYVSCCQYVPDEDTHLITSS-G-DQTCVLWDITTGLRTSV-FGGEFQSGHTADVLSVSISGSNSRMFVSGSC 227 (379)
Q Consensus 157 ------h~~~v~~~~~~~~~~~~l~s~~-~-d~~i~~wd~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~ 227 (379)
+......++++|++. +|+++. . +++|.+||+.++..... +.. .....+.+.|.+...+++.+.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-------~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTAA-------AGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGGG-------TTEEEEEECTTSSSEEEEEET
T ss_pred CccccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEecC-------CCcceeEEcCCCCeeEEEECC
Confidence 122345678999864 566554 3 68999999999876554 421 112224456655567888899
Q ss_pred CCcEEEEEccCCccceEE------EecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee--EEEeecc----CCC
Q 016974 228 DSTARLWDTRVASRAVRT------FHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL--QVYYQQH----GEN 295 (379)
Q Consensus 228 d~~i~vwd~~~~~~~~~~------~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~--~~~~~~~----~~~ 295 (379)
||.+.+|+.....+.... +..+..++ .+.++|++..++..+.++.+.++|+...... ..+.... ...
T Consensus 172 dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 172 DGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp TSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 999999998653333311 11122222 3345678888888888999999998754321 1111000 000
Q ss_pred -CCCCeEEEEEccCCCEEEEEEe-----------cCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeC
Q 016974 296 -EIPHVTSIAFSISGRLLFAGYS-----------NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSW 363 (379)
Q Consensus 296 -~~~~v~~~~fs~~g~~l~sg~~-----------dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~ 363 (379)
.......++|+|+++.++++.. .+.|.+||..+.+.+..+ ..+. +.+++|+|||++|++++.
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i----~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI----PGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE----ECTT--CCEEEEETTTTEEEEECS
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE----ecCC--eeEEEECCCCCEEEEeCC
Confidence 0001123789999998887654 347999999999888776 3344 889999999999998887
Q ss_pred CCcEEEEecCce
Q 016974 364 DTNLKIWAFGGY 375 (379)
Q Consensus 364 D~~i~vw~~~~~ 375 (379)
++|.+||....
T Consensus 325 -~~v~v~D~~t~ 335 (361)
T 2oiz_A 325 -GNVNVYDISQP 335 (361)
T ss_dssp -SCEEEEECSSS
T ss_pred -CeEEEEECCCC
Confidence 99999997653
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=7e-17 Score=141.71 Aligned_cols=252 Identities=15% Similarity=0.201 Sum_probs=168.6
Q ss_pred ccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCC
Q 016974 64 QGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTD 143 (379)
Q Consensus 64 ~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~ 143 (379)
.+|-....+++++++++++++.+.++.|++||.. ++....+... +
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~------------~---------------------- 70 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGEC------------G---------------------- 70 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCB------------S----------------------
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEeccc------------C----------------------
Confidence 3455678899999999888888888999999865 4332222100 0
Q ss_pred CCCCcceeeeecccccceEEEEEecCCCceEEEeeC-CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEE
Q 016974 144 KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG-DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMF 222 (379)
Q Consensus 144 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 222 (379)
...+|...+..+++.+.++.++++... ++.|.+|| .++.....+. ..+...+..+++.+ +++++
T Consensus 71 ---------~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~----~~~~~~~~~i~~~~-~g~l~ 135 (286)
T 1q7f_A 71 ---------KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFG----ATILQHPRGVTVDN-KGRII 135 (286)
T ss_dssp ---------SSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEEC----TTTCSCEEEEEECT-TSCEE
T ss_pred ---------CCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEec----CccCCCceEEEEeC-CCCEE
Confidence 001222345566674333444444432 78888888 4444443332 23345678888887 56788
Q ss_pred EEecCCCcEEEEEccCCccceEEEe--cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCe
Q 016974 223 VSGSCDSTARLWDTRVASRAVRTFH--GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 223 ~sg~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v 300 (379)
++...++.|.+||.. ...+..+. ++...+..++++|+|+++++.+.++.|++||.. ++.+..+.. ......+
T Consensus 136 v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~g~~~~p 209 (286)
T 1q7f_A 136 VVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGG---EGITNYP 209 (286)
T ss_dssp EEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESC---TTTSCSE
T ss_pred EEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEcc---CCccCCC
Confidence 888888999999964 23444443 344568999999999988888889999999974 444444321 1122457
Q ss_pred EEEEEccCCCEEEEEEecC-cEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCce
Q 016974 301 TSIAFSISGRLLFAGYSNG-DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGGY 375 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~~dg-~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~~ 375 (379)
..++++++|+++++...++ .|.+||.. ++.+..+.. ......+.+++++|+|+++++ +.|++|++|++...
T Consensus 210 ~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~--~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 210 IGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALES--KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEE--SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred cEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcc--cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 8999999999888887776 99999954 444444421 112234778999999987777 67999999998653
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=4.6e-17 Score=147.91 Aligned_cols=272 Identities=12% Similarity=0.090 Sum_probs=178.7
Q ss_pred eeccccccccEEEEEeeCCCCeEEEEc----------CCCcEEEEECCCCceeeEeecC------CcceEEEEECCCCCE
Q 016974 60 CRTLQGHAGKVYSLDWTSERNRIVSAS----------QDGRLIVWNALTSQKTHAIKLP------CAWVMTCAFSPTGQS 123 (379)
Q Consensus 60 ~~~l~gH~~~v~~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~s~~g~~ 123 (379)
..++..+..+ .++|+||+++|++++ .|++|.+||..+.+....+... ......++|+|+|++
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 3455556555 899999999998876 3678999999998888887653 234556899999999
Q ss_pred EEEeeC--CCcEEEEEcCCCCCCCCCcceeee-ecccccceEEEEEecCCCceEEEeeCCCeEEEeecCC-CeeEEEecC
Q 016974 124 VACGGL--DSVCSIFNLNSPTDKDGNLPVSRM-LSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT-GLRTSVFGG 199 (379)
Q Consensus 124 l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~ 199 (379)
|++++. ++.|.+||+.... .... +. +.+ ...+.+.|++...+++.+.||.+.+|++.. +........
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~-------~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~ 192 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGD-------YVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS 192 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTE-------EEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC
T ss_pred EEEECCCCCCeEEEEECCCCc-------EEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc
Confidence 998874 5789999987531 2222 22 111 122456777666788899999999999865 332211100
Q ss_pred -ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccc-eEEEec------cc----CCeeEEEEccCCCEEEE
Q 016974 200 -EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRA-VRTFHG------HE----GDVNTVKFFPDGNRFGT 267 (379)
Q Consensus 200 -~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~-~~~~~~------h~----~~v~~v~~sp~g~~l~s 267 (379)
.....+...+ .+.+.+ ++..++..+.++.|.++|+...... ...+.- +. ....-++|+|+++.+..
T Consensus 193 ~~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 193 KQMFSVKDDPI-FIAPAL-DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp CCCSCTTTSCB-CSCCEE-CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred cceEcCCCCce-EEEecc-cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 0001111111 111222 2334445567889999998643211 111110 11 11123789999887766
Q ss_pred eeC-----------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCc--eEEEe
Q 016974 268 GSD-----------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLA--KVVLN 334 (379)
Q Consensus 268 ~s~-----------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~--~~~~~ 334 (379)
+.. +++|.+||+.+++.+..+... . +.+++|+|+|++|+++.. +.|.+||..++ +.+..
T Consensus 271 ~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~------~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 271 FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR------D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT------T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred EEccCCCcccccCCCceEEEEECCCCcEEEEEecC------C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 543 358999999999887766432 1 679999999999998876 99999999998 87766
Q ss_pred cccccCCccCceeEEEECCCCC
Q 016974 335 LGSLQNSHEGRITCLGLSADGS 356 (379)
Q Consensus 335 ~~~~~~~h~~~v~~~~~s~d~~ 356 (379)
+ ..+......++++|||.
T Consensus 343 i----~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 343 I----EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp E----TTSCSSEEEEEECCCSC
T ss_pred e----ccCCCCcEEEEecCCCC
Confidence 5 23344557789999986
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=6.4e-17 Score=145.14 Aligned_cols=278 Identities=13% Similarity=0.060 Sum_probs=185.2
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
.|.++.|++++..+++.+.++.++.| .++....+..+...+.+++|+|+|++++++..++.|.+||.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~------ 77 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE------ 77 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC------
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc------
Confidence 46778899988888888889999999 355666666666778899999999988888889999999876421
Q ss_pred ceeeeecccccceEEEEEecCCCceEEEeeCC----CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE
Q 016974 149 PVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD----QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS 224 (379)
Q Consensus 149 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 224 (379)
.......+...+.++++.|++ .++++...+ +.|.+||..++.....+.. ..+...+..+.+++ +++++++
T Consensus 78 -~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~i~~d~-~g~l~v~ 151 (333)
T 2dg1_A 78 -IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIED---LSTAYCIDDMVFDS-KGGFYFT 151 (333)
T ss_dssp -EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECS---SSSCCCEEEEEECT-TSCEEEE
T ss_pred -EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc---CccCCcccceEECC-CCCEEEE
Confidence 112222455678999999875 455665555 6899999887654323211 12345688888887 5677776
Q ss_pred ecC------CCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEE-EEeeCCCeEEEEECCC-CceeEEEe---eccC
Q 016974 225 GSC------DSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRF-GTGSDDGTCRLFDIRT-GHQLQVYY---QQHG 293 (379)
Q Consensus 225 g~~------d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-~s~s~D~~i~iwd~~~-~~~~~~~~---~~~~ 293 (379)
... .+.|..+|... .....+..+...+..++|+|+|++| ++.+.++.|.+||+.+ +..+..+. ....
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~ 229 (333)
T 2dg1_A 152 DFRGYSTNPLGGVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF 229 (333)
T ss_dssp ECCCBTTBCCEEEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC
T ss_pred eccccccCCCceEEEEeCCC--CEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec
Confidence 553 23454454432 2233333344568899999999865 4555688999999864 33322111 0000
Q ss_pred CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccccc--CCccCceeEEEECCCCCeEEEeeCCC
Q 016974 294 ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQ--NSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 294 ~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
.. ...+..++++++|++.++...++.|.+||.. ++....+.... .+|...+.+++|+||++.|+.++.++
T Consensus 230 ~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 230 TG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CS-SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CC-CCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 11 1246789999999988877778899999974 44444432110 12333688999999987777666553
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=1e-16 Score=143.79 Aligned_cols=251 Identities=13% Similarity=0.111 Sum_probs=178.7
Q ss_pred CcceEEEEECCCCCEEEEeeCC------------------------CcEEEEEcCCCCCCCCCcceeeee-cccccceEE
Q 016974 109 CAWVMTCAFSPTGQSVACGGLD------------------------SVCSIFNLNSPTDKDGNLPVSRML-SGHKGYVSC 163 (379)
Q Consensus 109 ~~~v~~~~~s~~g~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~~~~~-~~h~~~v~~ 163 (379)
...+.+++++|+|+++++.+.+ +.|.+||..+.. +.... .++-.....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~-------~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE-------ILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC-------EEEEECTTTCSSEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe-------EEeccCCCccCCceE
Confidence 3568899999999999888877 468888865321 12222 234456788
Q ss_pred EEEecCCCceEEEeeCCCeEEEeecCCCe-eEEEecCccc----cCCccCeEEEEEeCCCCcEEEEec-CCCcEEEEEcc
Q 016974 164 CQYVPDEDTHLITSSGDQTCVLWDITTGL-RTSVFGGEFQ----SGHTADVLSVSISGSNSRMFVSGS-CDSTARLWDTR 237 (379)
Q Consensus 164 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~sg~-~d~~i~vwd~~ 237 (379)
+++.|++ .++++...++.|++||..... ....+..... ..+......+++++.++.++++.+ .++.|++||..
T Consensus 96 ia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~ 174 (329)
T 3fvz_A 96 LSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS 174 (329)
T ss_dssp EEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT
T ss_pred EEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC
Confidence 9999876 477888889999999986542 2333321111 234456789999976778888887 68999999943
Q ss_pred CCccceEEEec----------ccCCeeEEEEccC-CCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEc
Q 016974 238 VASRAVRTFHG----------HEGDVNTVKFFPD-GNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFS 306 (379)
Q Consensus 238 ~~~~~~~~~~~----------h~~~v~~v~~sp~-g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs 306 (379)
...+..+.. +......++++|+ +.++++...++.|++||..+++.+..+... .....+..++|+
T Consensus 175 --g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~---~~~~~~~~~~~~ 249 (329)
T 3fvz_A 175 --GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA---SFGRNVFAISYI 249 (329)
T ss_dssp --SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT---TTTTCEEEEEEE
T ss_pred --CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc---ccCCCcceeeec
Confidence 244444432 2234889999998 777888888999999999878877665322 123457889999
Q ss_pred cCCCEEEE-------EEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 307 ISGRLLFA-------GYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 307 ~~g~~l~s-------g~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
| |..+.+ ...+..|++||..+++.+..+... ..+...+..++++|||+.+++...+++|++|++.+
T Consensus 250 p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 250 P-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV-RKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp T-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS-SSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred C-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC-CCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 9 433333 234458999998888877766422 34566789999999999899999999999999876
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=7.4e-16 Score=138.88 Aligned_cols=257 Identities=11% Similarity=0.094 Sum_probs=167.7
Q ss_pred cEEEEEeeCCCCeEEEEc---------CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC---Cc--EE
Q 016974 69 KVYSLDWTSERNRIVSAS---------QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD---SV--CS 134 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s---------~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d---~~--i~ 134 (379)
.+....+ ||+.|+... .++.|.+||+.+++.. .+ ..+...+|+|+|+.|+.++.+ +. +.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 3666777 888876542 3678999999877643 33 457889999999999988764 34 55
Q ss_pred EEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC---------------------------CCeEEEee
Q 016974 135 IFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG---------------------------DQTCVLWD 187 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------------------------d~~i~~wd 187 (379)
+|++... + . ..+..+.. +..+.|+|++. .|+.++. ...|.+||
T Consensus 89 ~~~~~~g-----~--~-~~l~~~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 89 VADLETL-----S--S-KKILEAKN-IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEETTTT-----E--E-EEEEEESE-EEEEEECTTSS-EEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred EEECCCC-----c--e-EEEEcCCC-ccceeECCCCC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 6665432 1 1 12222333 88999999875 4555542 35789999
Q ss_pred cCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCC-------cEEEEEccCCccceEEEecccCCeeEEEEcc
Q 016974 188 ITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDS-------TARLWDTRVASRAVRTFHGHEGDVNTVKFFP 260 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~-------~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp 260 (379)
+.++.....+. . . .+..+.++| ++ +++++..+. ...+|.+. ..+ ...+..+ ..+..+ +|
T Consensus 159 ~~~~~~~~~l~-----~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 159 TESEEVIEEFE-----K-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK-VSFYAV--DS 224 (347)
T ss_dssp TTTTEEEEEEE-----E-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE-ESEEEE--EE
T ss_pred CCCCeEEeeec-----C-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC-CCc-eEEeccC-cceeeE--CC
Confidence 98876523331 1 2 567788887 45 777765542 44566554 323 3344444 555544 99
Q ss_pred CCCEEEEeeCC--------CeEEEEECCCCceeEEEeeccCCCCCCCeEE-EEEccCCCEEEEEEecCcEEEEeCCCceE
Q 016974 261 DGNRFGTGSDD--------GTCRLFDIRTGHQLQVYYQQHGENEIPHVTS-IAFSISGRLLFAGYSNGDCYVWDTLLAKV 331 (379)
Q Consensus 261 ~g~~l~s~s~D--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~fs~~g~~l~sg~~dg~i~iwd~~~~~~ 331 (379)
||++|+.++.+ ..|.+|| +++..... . .+...+.. +.|+ +| +++++..++.+++| +..++.
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~-~----~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL-D----EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS-T----TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEecc-c----cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 99999887754 3688888 44432221 1 11234665 8999 88 99999999999999 765544
Q ss_pred EEecccccCCccCceeEEEECCCCCeEEEeeCCCcE-EEEecC
Q 016974 332 VLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNL-KIWAFG 373 (379)
Q Consensus 332 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i-~vw~~~ 373 (379)
...+ .+.+.|.+++|+| .++++++.+++. .||.++
T Consensus 295 ~~~~-----~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 295 KPIA-----KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-----CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EEEe-----cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 3222 3467899999999 777887777765 777664
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=2.4e-17 Score=151.00 Aligned_cols=260 Identities=14% Similarity=0.069 Sum_probs=165.0
Q ss_pred EEECCCCceeeEeecCCcceEE-----EEECCCCCEEEEeeC-CCc--EEEEEcCCCCCCCCCcceeeeecccccceEEE
Q 016974 93 VWNALTSQKTHAIKLPCAWVMT-----CAFSPTGQSVACGGL-DSV--CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCC 164 (379)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~v~~-----~~~s~~g~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 164 (379)
.+|..++.....+..+...... .+|+|||++|+.++. ++. +.+||+.... ......++...+..+
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-------~~~lt~~~~~~~~~~ 86 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-------ATQLTEGRGDNTFGG 86 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-------EEECCCSSCBCSSSC
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-------eEEeeeCCCCCccce
Confidence 4566777777777666554554 789999999999887 664 6666765421 223334455455456
Q ss_pred EEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE--EEeCCCCcEEEE------------------
Q 016974 165 QYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV--SISGSNSRMFVS------------------ 224 (379)
Q Consensus 165 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~l~s------------------ 224 (379)
.|+|++ ..|+.++.++.|.+||+.++....... .+...+... .+++ ++.+++.
T Consensus 87 ~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~-----~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 87 FLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQ-----VPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp EECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE-----CCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred EEcCCC-CEEEEEeCCCeEEEEECCCCcceeeee-----chhhcccccceeECC-CCCeeccccccCcccccccccchhh
Confidence 899986 578888889999999999886554432 222223222 2344 5556552
Q ss_pred ----ecCCCcEEEEEccCCccceEEEecccCCeeEEEEcc-CCCEEEEeeCC------CeEEEEECCCCceeEEEeeccC
Q 016974 225 ----GSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP-DGNRFGTGSDD------GTCRLFDIRTGHQLQVYYQQHG 293 (379)
Q Consensus 225 ----g~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~~ 293 (379)
...+..|.+||+... + ...+..+...+..++|+| ||+.|+.++.+ ..|.++|+..+.... +..
T Consensus 160 ~~~~~~~~~~l~~~d~~~g-~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~--- 233 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLKTG-E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKT--- 233 (388)
T ss_dssp HHGGGCCCEEEEEEETTTC-C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCC---
T ss_pred hhhccCCcceEEEEECCCC-c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eee---
Confidence 234567999998754 2 344556777899999999 99999887753 378888876554322 211
Q ss_pred CCCCCCeEEEEEccCCCEEEEEEe-cC----cEEEEeCCCceEEEecccccCCccCc---eeEEEECCCCCeEEEe----
Q 016974 294 ENEIPHVTSIAFSISGRLLFAGYS-NG----DCYVWDTLLAKVVLNLGSLQNSHEGR---ITCLGLSADGSALCTG---- 361 (379)
Q Consensus 294 ~~~~~~v~~~~fs~~g~~l~sg~~-dg----~i~iwd~~~~~~~~~~~~~~~~h~~~---v~~~~~s~d~~~l~s~---- 361 (379)
......+...+|||||+.|+..+. ++ .|++||+.+++..... .. .++... ...++|+|||+.|+..
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT-SM-PACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE-EE-CCEEEEEECTTSSEEEEEECCC-------
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE-cC-CCceeeeecCCCCeEccCCCcceeEeeec
Confidence 111124778899999997765443 33 3999999877643211 11 111000 1223689999988854
Q ss_pred -----eCCCcEEEEecCc
Q 016974 362 -----SWDTNLKIWAFGG 374 (379)
Q Consensus 362 -----s~D~~i~vw~~~~ 374 (379)
..+..|++|++..
T Consensus 312 ~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp -----CCCCEEEEEETTT
T ss_pred cccccCCCCEEEEEeccC
Confidence 4567899999875
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=5.2e-16 Score=154.36 Aligned_cols=303 Identities=13% Similarity=0.049 Sum_probs=178.6
Q ss_pred eecccccccc-----EEEEEeeCCCCeEEEEcCC---------CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEE
Q 016974 60 CRTLQGHAGK-----VYSLDWTSERNRIVSASQD---------GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVA 125 (379)
Q Consensus 60 ~~~l~gH~~~-----v~~~~~~~~~~~l~s~s~D---------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 125 (379)
...+.+|... ...++|||||++|+.++.+ +.+.+||+.+++.. .+..+...+...+|||||+.||
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la 127 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLA 127 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEE
T ss_pred EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEE
Confidence 3445666543 2447889999999998887 55679999988754 4555567799999999999999
Q ss_pred EeeCCCcEEEEEcCCCCCCCCC--cceeeeecccccce---------EEEEEecCCCceEEEeeCCC-------------
Q 016974 126 CGGLDSVCSIFNLNSPTDKDGN--LPVSRMLSGHKGYV---------SCCQYVPDEDTHLITSSGDQ------------- 181 (379)
Q Consensus 126 ~~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~~h~~~v---------~~~~~~~~~~~~l~s~~~d~------------- 181 (379)
.+. |+.|.+|++.......-. -.....+.++.+.| ..+.|+|++ +.|+.++.|.
T Consensus 128 ~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~ 205 (740)
T 4a5s_A 128 YVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSD 205 (740)
T ss_dssp EEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCS
T ss_pred EEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecC
Confidence 884 678999998653211000 00000122222211 347899986 4566654221
Q ss_pred -----------------------eEEEeecCC---C---eeEEEecCccccCCccCeEEEEEeCCCCcEEEEe----cCC
Q 016974 182 -----------------------TCVLWDITT---G---LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG----SCD 228 (379)
Q Consensus 182 -----------------------~i~~wd~~~---~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg----~~d 228 (379)
+|.+||+.+ + ............+|...+..++|+| ++++++.. ..+
T Consensus 206 ~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~ 284 (740)
T 4a5s_A 206 ESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNY 284 (740)
T ss_dssp TTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTE
T ss_pred CCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCE
Confidence 477788877 6 2222211000013667788999998 56655443 223
Q ss_pred CcEEEEEccCCc----c-ceEEE--ecccCCee-----EEEEccCCCEEE-EeeC-C--CeEEEEECCCCceeEEEeecc
Q 016974 229 STARLWDTRVAS----R-AVRTF--HGHEGDVN-----TVKFFPDGNRFG-TGSD-D--GTCRLFDIRTGHQLQVYYQQH 292 (379)
Q Consensus 229 ~~i~vwd~~~~~----~-~~~~~--~~h~~~v~-----~v~~sp~g~~l~-s~s~-D--~~i~iwd~~~~~~~~~~~~~~ 292 (379)
..|.+||+.... . .+..+ .+|...|. .++|+|||+.|+ ..+. + ..|.+||+.++...... .
T Consensus 285 ~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT-~-- 361 (740)
T 4a5s_A 285 SVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT-K-- 361 (740)
T ss_dssp EEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC-C--
T ss_pred EEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc-c--
Confidence 479999987653 0 11112 45666665 789999999887 6664 3 46889998876544322 1
Q ss_pred CCCCCCCeEEEEEccCCCEEEEEEec-----CcEEEE--eCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCC-
Q 016974 293 GENEIPHVTSIAFSISGRLLFAGYSN-----GDCYVW--DTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD- 364 (379)
Q Consensus 293 ~~~~~~~v~~~~fs~~g~~l~sg~~d-----g~i~iw--d~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D- 364 (379)
+ ...+..+. .++++.|+..+.. +..+|| ++..+.....+.....+....+..+.||||+++++.....
T Consensus 362 g---~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~ 437 (740)
T 4a5s_A 362 G---TWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGP 437 (740)
T ss_dssp S---SSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSB
T ss_pred C---CEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCC
Confidence 1 12344443 2446655544332 334444 5444333222311101223467889999999987654333
Q ss_pred --CcEEEEecC
Q 016974 365 --TNLKIWAFG 373 (379)
Q Consensus 365 --~~i~vw~~~ 373 (379)
..+.+++..
T Consensus 438 ~~p~~~l~~~~ 448 (740)
T 4a5s_A 438 GLPLYTLHSSV 448 (740)
T ss_dssp SSCEEEEEETT
T ss_pred CCCEEEEEECC
Confidence 356676654
No 176
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=7.3e-14 Score=122.73 Aligned_cols=283 Identities=7% Similarity=-0.036 Sum_probs=191.2
Q ss_pred cccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeE-eecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Q 016974 63 LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHA-IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 141 (379)
+..+...+.++++.++|+.+++...++.|.+||.. ++.... .......+..++++++|.+.++...++.+..|+...
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g- 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG- 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-
Confidence 44555679999999999988877778999999987 543321 122346688999999999888877788888887642
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
.... ..+......+..+.+.+++ .++++...++.|..||. ++....... ..+...+..+.+.+ ++++
T Consensus 88 -----~~~~-~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~----~~~~~~~~~i~~~~-~g~l 154 (299)
T 2z2n_A 88 -----IIKE-YTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYEL----PNKGSYPSFITLGS-DNAL 154 (299)
T ss_dssp -----CEEE-EECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECT-TSCE
T ss_pred -----cEEE-EeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecC----CCCCCCCceEEEcC-CCCE
Confidence 1111 1112234467788888764 55666667889999998 543332211 12334577888876 5678
Q ss_pred EEEecCCCcEEEEEccCCccceEE-EecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCe
Q 016974 222 FVSGSCDSTARLWDTRVASRAVRT-FHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 222 l~sg~~d~~i~vwd~~~~~~~~~~-~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v 300 (379)
+++...++.|..||. .. +.... ...+...+..++++++|.++++...++.|.+||. ++... .+.. ......+
T Consensus 155 ~v~~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~---~~~~~~~ 227 (299)
T 2z2n_A 155 WFTENQNNAIGRITE-SG-DITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKI---PTPNARP 227 (299)
T ss_dssp EEEETTTTEEEEECT-TC-CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEEC---SSTTCCE
T ss_pred EEEeCCCCEEEEEcC-CC-cEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEEC---CCCCCCc
Confidence 887777889999997 33 22221 2233456889999999998877777889999998 66533 2211 1123458
Q ss_pred EEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 301 TSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
.+++++++|++.++...++.|..||. .+... .+.. ..+...+.++++ ++|+++++.+ .+.|..++..
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~--~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTS-NNIIE-EYPI--QIKSAEPHGICF-DGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEET-TTEEE-EEEC--SSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC
T ss_pred eeEEECCCCCEEEeccCCceEEEECC-CCceE-EEeC--CCCCCccceEEe-cCCCEEEEec-CCcEEEEEcC
Confidence 89999999997666657789999997 34432 2211 234457899999 9998888765 4555555543
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=4.2e-14 Score=126.69 Aligned_cols=243 Identities=10% Similarity=0.060 Sum_probs=162.6
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC----CcEEEE
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD----SVCSIF 136 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----~~i~iw 136 (379)
..+.+|...+.+++|++++++++++..++.|.+||..+++.......+...+.+++++|+|+++++...+ +.+.+|
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 3566677778999999999988889999999999998877655443455679999999999988887766 678888
Q ss_pred EcCCCCCCCCCcceeeeec--ccccceEEEEEecCCCceEEEeeC------CCeEEEeecCCCeeEEEecCccccCCccC
Q 016974 137 NLNSPTDKDGNLPVSRMLS--GHKGYVSCCQYVPDEDTHLITSSG------DQTCVLWDITTGLRTSVFGGEFQSGHTAD 208 (379)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~~~~h~~~ 208 (379)
|..... ....+. .+...+..+.+.|++ .++++... .+.|..+|..++...... .+...
T Consensus 118 d~~~~~-------~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~ 183 (333)
T 2dg1_A 118 TENGDN-------LQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII------QNISV 183 (333)
T ss_dssp CTTSCS-------CEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEE------EEESS
T ss_pred eCCCCE-------EEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEEee------cCCCc
Confidence 876432 111111 234568889999875 44554443 355666666554332221 11234
Q ss_pred eEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEE--------EecccCCeeEEEEccCCCEEEEeeCCCeEEEEECC
Q 016974 209 VLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRT--------FHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIR 280 (379)
Q Consensus 209 v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~--------~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~ 280 (379)
...+++++.+..++++.+.++.|.+||.......... +.++ ..+..++++++|+++++...++.|.+||.
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~- 261 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK- 261 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-
Confidence 6778888744446667777889999998632222211 1122 36788999999998888888899999998
Q ss_pred CCceeEEEeeccC-CCCCCCeEEEEEccCCCEEEEEEecC
Q 016974 281 TGHQLQVYYQQHG-ENEIPHVTSIAFSISGRLLFAGYSNG 319 (379)
Q Consensus 281 ~~~~~~~~~~~~~-~~~~~~v~~~~fs~~g~~l~sg~~dg 319 (379)
+++.+..+..... ..+...+.+++|+|+|+.|+.++.++
T Consensus 262 ~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 262 RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 4555555432111 01112478899999998887776654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=7.3e-15 Score=129.50 Aligned_cols=242 Identities=10% Similarity=0.069 Sum_probs=162.3
Q ss_pred eeeEeecCCcceEEEEECCCCC-EEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC
Q 016974 101 KTHAIKLPCAWVMTCAFSPTGQ-SVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG 179 (379)
Q Consensus 101 ~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 179 (379)
.+..+........+++|+|+|+ +++++..++.|..|+.... ...+..+...+.++++.|++ .++++...
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~l~~~~dg-~l~v~~~~ 88 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---------LSPEMHPSHHQNGHCLNKQG-HLIACSHG 88 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---------EEEEESSCSSEEEEEECTTC-CEEEEETT
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---------eEEEECCCCCcceeeECCCC-cEEEEecC
Confidence 3344445556678899999998 7788888999999997642 12344456678899999875 46666666
Q ss_pred CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE----ecCC-----------CcEEEEEccCCccceE
Q 016974 180 DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS----GSCD-----------STARLWDTRVASRAVR 244 (379)
Q Consensus 180 d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s----g~~d-----------~~i~vwd~~~~~~~~~ 244 (379)
++.|.+||..++........ ........+..+++++ +++++++ |+.+ +.-.||.+... ....
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADS-FEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS 165 (296)
T ss_dssp TTEEEEECSTTCCEEEEECE-ETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE
T ss_pred CCeEEEEcCCCCcEEEEeec-cCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE
Confidence 78999999977754433211 0011123456678886 6778887 3310 11244444332 2344
Q ss_pred EEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECC-CCce---eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCc
Q 016974 245 TFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIR-TGHQ---LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGD 320 (379)
Q Consensus 245 ~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~-~~~~---~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~ 320 (379)
.+..+....+.++|+|+|+.+++.+.++.|.+||+. ++.. ...+ . . ....+..++++++|++.++. ++.
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~-~---~~~~p~~i~~d~~G~l~v~~--~~~ 238 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T-V---EPGKTDGLRVDAGGLIWASA--GDG 238 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C-C---SSSCCCSEEEBTTSCEEEEE--TTE
T ss_pred EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e-C---CCCCCCeEEECCCCCEEEEc--CCe
Confidence 455666778999999999999777888999999986 4443 2222 1 1 12345679999999976665 889
Q ss_pred EEEEeCCCceEEEecccccCCccCceeEEEE-CCCCCeEEEeeCCCcEE
Q 016974 321 CYVWDTLLAKVVLNLGSLQNSHEGRITCLGL-SADGSALCTGSWDTNLK 368 (379)
Q Consensus 321 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~-s~d~~~l~s~s~D~~i~ 368 (379)
|.+||.. ++....+ ..+.. +++++| +|+++.|++++.++..+
T Consensus 239 v~~~~~~-g~~~~~~----~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 239 VHVLTPD-GDELGRV----LTPQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp EEEECTT-SCEEEEE----ECSSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred EEEECCC-CCEEEEE----ECCCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 9999975 5555444 23445 889999 68999999888874333
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=6.4e-16 Score=151.73 Aligned_cols=254 Identities=14% Similarity=0.090 Sum_probs=155.6
Q ss_pred eccccccccEE---------EEEee--CCCCe-EEEEcC-CCcEEEEECC--CCceeeEeec-----CCcceEEEEECCC
Q 016974 61 RTLQGHAGKVY---------SLDWT--SERNR-IVSASQ-DGRLIVWNAL--TSQKTHAIKL-----PCAWVMTCAFSPT 120 (379)
Q Consensus 61 ~~l~gH~~~v~---------~~~~~--~~~~~-l~s~s~-D~~v~iwd~~--~~~~~~~~~~-----~~~~v~~~~~s~~ 120 (379)
..+.+|...+. ...|+ |||+. |+.++. +..|.+|+.. .......+.. +...+..++|+||
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC
Confidence 34566665555 56666 99998 765543 5566666654 2033444444 4567889999999
Q ss_pred CCEEEEeeCC----------CcEEEEEcCCCCCCC-CCcceeeeec-ccccceEEEEEecCCCceEEEeeCC--------
Q 016974 121 GQSVACGGLD----------SVCSIFNLNSPTDKD-GNLPVSRMLS-GHKGYVSCCQYVPDEDTHLITSSGD-------- 180 (379)
Q Consensus 121 g~~l~~~~~d----------~~i~iw~~~~~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d-------- 180 (379)
|+.|++++.| ..|.+|++....... +. ...+. .+...+..++|+|++ +.|+.++.+
T Consensus 141 g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 141 RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---VRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---SEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTC
T ss_pred CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---eeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCC
Confidence 9999998877 578899986510000 11 12334 455677788999986 467666544
Q ss_pred CeEEEeecC-CC---eeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccC-CccceEEEecccCC---
Q 016974 181 QTCVLWDIT-TG---LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRV-ASRAVRTFHGHEGD--- 252 (379)
Q Consensus 181 ~~i~~wd~~-~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~-~~~~~~~~~~h~~~--- 252 (379)
..|.+||+. ++ ...... ..|...+..+.|+| ++++++++..++..+||.+.. .........++...
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~-----~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p 290 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLL-----GGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGP 290 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEE-----EETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCC
T ss_pred cEEEEEEECCCCcccccEEeC-----CCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCc
Confidence 479999998 56 332222 23456788999997 455888888888555554432 12222222222222
Q ss_pred -----eeEEEEccCCCEEEEeeCCCeEEEE--ECCCCceeEEEeeccCCCCCCCeEEEEEccCCCE--EEEEEecC--cE
Q 016974 253 -----VNTVKFFPDGNRFGTGSDDGTCRLF--DIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRL--LFAGYSNG--DC 321 (379)
Q Consensus 253 -----v~~v~~sp~g~~l~s~s~D~~i~iw--d~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~--l~sg~~dg--~i 321 (379)
+..++|+|++.++++++. +.++|| |+.+++ +..+.. +...+..+ ++++++. +++++.+. .|
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~-----~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i 362 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG-----PWTEWAAT-LTVSGTRAVGVAASPRTAYEV 362 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS-----SCCEEEEE-EEEETTEEEEEEEETTEEEEE
T ss_pred cccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC-----CCCeEEEE-EecCCCEEEEEEcCCCCCCEE
Confidence 567899999999999998 999999 655554 333321 12345555 1445543 33344443 56
Q ss_pred EEEeCCCceEE
Q 016974 322 YVWDTLLAKVV 332 (379)
Q Consensus 322 ~iwd~~~~~~~ 332 (379)
++||..+++..
T Consensus 363 ~~~d~~~g~~~ 373 (662)
T 3azo_A 363 VELDTVTGRAR 373 (662)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCceE
Confidence 66776666543
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=9.6e-14 Score=132.72 Aligned_cols=287 Identities=10% Similarity=0.005 Sum_probs=191.7
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecc
Q 016974 77 SERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSG 156 (379)
Q Consensus 77 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 156 (379)
+.+..+++...+++|.++|..+++.+..+.... .+..++|+|+|+++++++.|+.+.+||+.... . .....+..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t---~--~~v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKE---P--TTVAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSS---C--CEEEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCC---C--cEeEEEec
Confidence 344567788899999999999999888887543 45689999999999999999999999985111 1 12223332
Q ss_pred cccceEEEEEe----cCCCceEEEeeCCCeEEEeecCCCeeEEEecCccc-----cCC-ccCeEEEEEeCCCCcEEEEec
Q 016974 157 HKGYVSCCQYV----PDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQ-----SGH-TADVLSVSISGSNSRMFVSGS 226 (379)
Q Consensus 157 h~~~v~~~~~~----~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-----~~h-~~~v~~~~~~~~~~~~l~sg~ 226 (379)
.. ....++|+ |++...+++...+++|.++|..+...+..+..... ..| ...+..+..++....++++-.
T Consensus 239 G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 239 GS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 22 24678899 57655556666779999999988776655432110 012 225677777776667777778
Q ss_pred CCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee-CCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEE
Q 016974 227 CDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS-DDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAF 305 (379)
Q Consensus 227 ~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~f 305 (379)
.+|.|.++|....................+.|+|+|+++++++ .+++|.++|+.+++.+..........+.+....+ +
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~ 396 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-V 396 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-E
T ss_pred CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-E
Confidence 8899999998754322111112334577899999999987665 6789999999998876655330112222111112 5
Q ss_pred ccCCCEE-EEEE-ecCcEEEEeCCC-------ceEEEecccccCCccCceeEEEECCCCCeEEEeeC-------CCcEEE
Q 016974 306 SISGRLL-FAGY-SNGDCYVWDTLL-------AKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSW-------DTNLKI 369 (379)
Q Consensus 306 s~~g~~l-~sg~-~dg~i~iwd~~~-------~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~-------D~~i~v 369 (379)
+|++..+ +++. .+++|.++|... .+.+.++... ..++ ..+.++|++++|..... .++|.|
T Consensus 397 ~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~---g~g~-~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 397 HPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL---GGGS-LFIKTHPNSQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS---CSCC-CCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred CCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC---CCCC-EEEEeCCCCCeEEEecCCCCCcccCceEEE
Confidence 7875544 4443 568999999876 4555555321 1222 34678999999887653 469999
Q ss_pred EecCce
Q 016974 370 WAFGGY 375 (379)
Q Consensus 370 w~~~~~ 375 (379)
+|+..+
T Consensus 473 ~d~~~~ 478 (567)
T 1qks_A 473 FDIKAM 478 (567)
T ss_dssp EEGGGC
T ss_pred EECCcc
Confidence 998754
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=7.2e-15 Score=145.47 Aligned_cols=250 Identities=9% Similarity=0.047 Sum_probs=164.3
Q ss_pred cccccEEEEEeeCCCCeEEEEcCCC-----cEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCc-------
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQDG-----RLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV------- 132 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~------- 132 (379)
+|...+..++|||||++||.++.++ +|++||+.+++..... .....+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4555688999999999998765543 8999999988765432 22223567899999999999988766
Q ss_pred ---------EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC-----CCeEEEeecCC------Ce
Q 016974 133 ---------CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG-----DQTCVLWDITT------GL 192 (379)
Q Consensus 133 ---------i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----d~~i~~wd~~~------~~ 192 (379)
|.+|++.++... .........|...+..+.|+|++. +|+.++. +..|.+||+.+ +.
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~---~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSE---DILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGG---CEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccCCCCEEEEEECCCCccc---ceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 999998753211 011112223555678899999875 4554443 67899999976 42
Q ss_pred -eEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC---CcEEEEEccCCcc-ceEEEecccC--CeeEEEEccCCCEE
Q 016974 193 -RTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD---STARLWDTRVASR-AVRTFHGHEG--DVNTVKFFPDGNRF 265 (379)
Q Consensus 193 -~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d---~~i~vwd~~~~~~-~~~~~~~h~~--~v~~v~~sp~g~~l 265 (379)
....+ ..+...+.. .+++.+..+++.+..+ +.|.+||+..... ....+..|.. .+..++|++++.++
T Consensus 277 ~~~~~l-----~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 277 LKWVKL-----IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLV 350 (710)
T ss_dssp CCCEEE-----ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEE
T ss_pred cceEEe-----eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEE
Confidence 12222 223333433 3555445555555433 3689999875431 2344555544 68889999888888
Q ss_pred EEeeCCCe--EEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE----ecCcEEEEeCCCce
Q 016974 266 GTGSDDGT--CRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY----SNGDCYVWDTLLAK 330 (379)
Q Consensus 266 ~s~s~D~~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~----~dg~i~iwd~~~~~ 330 (379)
++...|+. |.+||+.+++.+..+.. ....+..++++|+++.++... ..++|++||+.+++
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~-----~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPL-----EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECC-----CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCC-----CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88888885 66678767765544422 134578899999998666443 34689999987655
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=6.5e-14 Score=138.64 Aligned_cols=243 Identities=11% Similarity=0.023 Sum_probs=160.6
Q ss_pred ceEEEEECCCCCEEEEeeCCC-----cEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCe---
Q 016974 111 WVMTCAFSPTGQSVACGGLDS-----VCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQT--- 182 (379)
Q Consensus 111 ~v~~~~~s~~g~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~--- 182 (379)
.+..++|||||++|+.++.++ .|++||+.+.. . ....+.. ..+..++|+|++. .|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-----~-~~~~~~~--~~~~~~~wspDg~-~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-----E-LPDVLER--VKFSCMAWTHDGK-GMFYNAYPQQDGK 196 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-----E-EEEEEEE--ECSCCEEECTTSS-EEEEEECCCCSSC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-----C-CcccccC--cccceEEEEeCCC-EEEEEEECCcccc
Confidence 577889999999998776543 89999987532 1 1111211 1256689999864 5666666655
Q ss_pred -------------EEEeecCCCee--EEEecCccccCCccCeEEEEEeCCCCcEEEEecC-----CCcEEEEEccC----
Q 016974 183 -------------CVLWDITTGLR--TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSC-----DSTARLWDTRV---- 238 (379)
Q Consensus 183 -------------i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-----d~~i~vwd~~~---- 238 (379)
|.+|++.++.. ...+.. ..|...+..+.+++ ++++++.++. +..|.+||+..
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~---~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEF---PDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECC---TTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEecc---CCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 99999987652 122211 22445577888997 5555555443 56899999875
Q ss_pred --CccceEEEecccCCeeEEEEccCCCEEEEeeCC----CeEEEEECCCCce--eEEEeeccCCCCCCCeEEEEEccCCC
Q 016974 239 --ASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDD----GTCRLFDIRTGHQ--LQVYYQQHGENEIPHVTSIAFSISGR 310 (379)
Q Consensus 239 --~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D----~~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~fs~~g~ 310 (379)
.......+..+...+.. .|+|+|+.|+..+.+ ..|.+||+.++.. ...+.... ....+..++|++++.
T Consensus 273 ~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH---EKDVLEWVACVRSNF 348 (710)
T ss_dssp SCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC---SSCEEEEEEEETTTE
T ss_pred cCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC---CCCeEEEEEEEcCCE
Confidence 32235556667666655 588999988776653 3699999987641 22332211 112477889998888
Q ss_pred EEEEEEecCc--EEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEe----eCCCcEEEEecCc
Q 016974 311 LLFAGYSNGD--CYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTG----SWDTNLKIWAFGG 374 (379)
Q Consensus 311 ~l~sg~~dg~--i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~----s~D~~i~vw~~~~ 374 (379)
++++...|+. |++||..+++....+ ..+.+.|..++++|+++.|+.. ...++|++|++..
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l----~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIF----PLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEE----CCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEec----CCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 8888888884 667787566654444 3456788899999999766632 2347899999754
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=4.3e-14 Score=126.55 Aligned_cols=267 Identities=9% Similarity=0.014 Sum_probs=175.4
Q ss_pred cCCCcEEEEECCCCceeeEeec------CCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeeccccc
Q 016974 86 SQDGRLIVWNALTSQKTHAIKL------PCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKG 159 (379)
Q Consensus 86 s~D~~v~iwd~~~~~~~~~~~~------~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~ 159 (379)
+.+++|.++|..+++....+.. .......+++. .++..++...++.+.+||..+.. ....+. ...
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~-------~~~~i~-~~~ 84 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK-------EVGRIT-GFT 84 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC-------EEEEEE-CCS
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccE-------EEEEcC-CCC
Confidence 4589999999998876554311 11234566664 45566666678999999987532 223332 234
Q ss_pred ceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEec-CCCcEEEEEccC
Q 016974 160 YVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS-CDSTARLWDTRV 238 (379)
Q Consensus 160 ~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-~d~~i~vwd~~~ 238 (379)
....+++++++ ..+++...++.|.+||..++.....+......+.......+++. ++.++++.. .++.|.++|..+
T Consensus 85 ~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 85 SPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp SEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTT
T ss_pred CCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCC
Confidence 56778888875 55555548999999999988765544321101111133345552 556666654 588999999876
Q ss_pred CccceEEEecccCCeeEEEEccCCCEEEEeeCC----------CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccC
Q 016974 239 ASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDD----------GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSIS 308 (379)
Q Consensus 239 ~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~ 308 (379)
. +.+..+.. ......++++|+|++++++..+ +.|.++|..+++....+....+ .....++|+|+
T Consensus 162 ~-~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g----~~p~~la~~~d 235 (328)
T 3dsm_A 162 D-KVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG----DWPSEVQLNGT 235 (328)
T ss_dssp T-EEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT----CCCEEEEECTT
T ss_pred C-eEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC----CCceeEEEecC
Confidence 5 44444443 2345789999999987777654 7899999998876655432111 24689999999
Q ss_pred CCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECC-CCCeEEEe----eCCCcEEEEecCc
Q 016974 309 GRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSA-DGSALCTG----SWDTNLKIWAFGG 374 (379)
Q Consensus 309 g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~-d~~~l~s~----s~D~~i~vw~~~~ 374 (379)
+++|++... .|++||..+++... . .+...+......++++| ++...++. ..+++|.+|+..+
T Consensus 236 ~~~lyv~~~--~v~~~d~~t~~~~~-~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 236 RDTLYWINN--DIWRMPVEADRVPV-R-PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp SCEEEEESS--SEEEEETTCSSCCS-S-CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred CCEEEEEcc--EEEEEECCCCceee-e-eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 999988654 89999987766421 1 11111235678999999 45555555 5789999999875
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.69 E-value=1.1e-15 Score=140.04 Aligned_cols=254 Identities=12% Similarity=0.016 Sum_probs=156.1
Q ss_pred EEECCCCceeeEeecCCcc-----eEEEEECCCCCEEEEeeCC---CcEEEEEcCCCCCCCCCcceeeeecccccc-eEE
Q 016974 93 VWNALTSQKTHAIKLPCAW-----VMTCAFSPTGQSVACGGLD---SVCSIFNLNSPTDKDGNLPVSRMLSGHKGY-VSC 163 (379)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~-v~~ 163 (379)
..|..+++.+..+..+... +..++|+|+|++|+....+ ..+.+|++.... . ..+..+... ...
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-------~-~~l~~~~~~~~~~ 85 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-------A-VQLTEGKGDNTFG 85 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-------E-EECCCSSCBCTTT
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-------E-EEeecCCCCcccc
Confidence 3466677666665543222 5667899999998877543 357777765421 1 122222222 223
Q ss_pred EEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEE-------------------EEEeCCCCcEEEE
Q 016974 164 CQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS-------------------VSISGSNSRMFVS 224 (379)
Q Consensus 164 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~l~s 224 (379)
+.|+|++ ..|+.++.++.|.+||+.++....... .+...... ..++| +++.++.
T Consensus 86 ~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~-----~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~ 158 (396)
T 3c5m_A 86 GFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYT-----VDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKF 158 (396)
T ss_dssp CEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE-----CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHH
T ss_pred ceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEe-----cccccCCCCCEEEeccCCccccccccccccCC-CCcceee
Confidence 6789986 578888888899999998875444332 11111111 12233 2233222
Q ss_pred e-----cCCCcEEEEEccCCccceEEEecccCCeeEEEEcc-CCCEEEEeeCC------CeEEEEECCCCceeEEEeecc
Q 016974 225 G-----SCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFP-DGNRFGTGSDD------GTCRLFDIRTGHQLQVYYQQH 292 (379)
Q Consensus 225 g-----~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~ 292 (379)
. ..+..|.+||+... +. ..+..+...+..+.|+| ++..|+..+.+ ..|.+||+.+++..... . +
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g-~~-~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~-~ 234 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETG-EL-EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-E-H 234 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTC-CE-EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS-C-C
T ss_pred eeeccCCCcceEEEEECCCC-cE-EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee-c-c
Confidence 2 35668999998754 22 33345677899999999 88877776643 36888998765432221 1 1
Q ss_pred CCCCCCCeEEEEEccCCCEEEEEEec-----CcEEEEeCCCceEEEecccccCCccCceeEEEECC-CCCeEEEee----
Q 016974 293 GENEIPHVTSIAFSISGRLLFAGYSN-----GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSA-DGSALCTGS---- 362 (379)
Q Consensus 293 ~~~~~~~v~~~~fs~~g~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~-d~~~l~s~s---- 362 (379)
.....+..++|+|+|++|+.++.+ +.|++||+.+++..... .. .+ .. +.|+| ||++|++++
T Consensus 235 --~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~-~~----~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 235 --AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VM-PP----CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp --CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-EC-CS----EE-EEEECSSSSEEEEEECCC-
T ss_pred --CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eC-CC----CC-CCccCCCCceEEEecCCcc
Confidence 011247789999999988777654 34999998776543321 11 11 23 78999 999988765
Q ss_pred ------------CCCcEEEEecCc
Q 016974 363 ------------WDTNLKIWAFGG 374 (379)
Q Consensus 363 ------------~D~~i~vw~~~~ 374 (379)
.+..|++|++..
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp ---------CCCCCCEEEEEETTT
T ss_pred eeeccccccccCCCCcEEEEeccc
Confidence 347899999754
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=2.3e-15 Score=148.63 Aligned_cols=250 Identities=9% Similarity=-0.013 Sum_probs=161.1
Q ss_pred cccccEEEEEeeCCCCeEE-----EEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCc-------
Q 016974 65 GHAGKVYSLDWTSERNRIV-----SASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV------- 132 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~-----s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~------- 132 (379)
+|...+.+++|||||++|| +|+.+.+|++||+.+++..............++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 5666799999999999998 5566789999999988764111111122257899999999999998876
Q ss_pred ------EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC----eEEEeecCCCeeEEEecCccc
Q 016974 133 ------CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ----TCVLWDITTGLRTSVFGGEFQ 202 (379)
Q Consensus 133 ------i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~----~i~~wd~~~~~~~~~~~~~~~ 202 (379)
|++|++.++... .........|...+..+.|+|++. +|+.++.++ .|.+||..++......
T Consensus 198 ~~~~~~v~~~~l~t~~~~---~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~~~~~l~----- 268 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSK---DTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGEKDFRLLV----- 268 (695)
T ss_dssp GGGGCEEEEEETTSCGGG---CEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTCSSCEEEE-----
T ss_pred CCCCCEEEEEECCCCchh---ceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCCCceEEee-----
Confidence 999998754311 112222334556788899999874 565555444 6677766554332222
Q ss_pred cCCccCeEEEEEeCCCCcEEEEec---CCCcEEEEEccCCcc-ceEEEecc--cCCeeEEEEccCCCEEEEeeCCCeEEE
Q 016974 203 SGHTADVLSVSISGSNSRMFVSGS---CDSTARLWDTRVASR-AVRTFHGH--EGDVNTVKFFPDGNRFGTGSDDGTCRL 276 (379)
Q Consensus 203 ~~h~~~v~~~~~~~~~~~~l~sg~---~d~~i~vwd~~~~~~-~~~~~~~h--~~~v~~v~~sp~g~~l~s~s~D~~i~i 276 (379)
.+...+....+. .+. +++++. .++.|.+||+..... ....+..| ...+..++|+ ++.++++...|+..+|
T Consensus 269 -~~~~~~~~~~~~-~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 269 -KGVGAKYEVHAW-KDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEV 344 (695)
T ss_dssp -ECSSCCEEEEEE-TTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEE
T ss_pred -cCCCceEEEEec-CCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEE
Confidence 233334444443 344 655554 357899999865431 12333333 4457888888 7778888899999888
Q ss_pred EECC-CCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE----ecCcEEEEeCCCceE
Q 016974 277 FDIR-TGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY----SNGDCYVWDTLLAKV 331 (379)
Q Consensus 277 wd~~-~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~----~dg~i~iwd~~~~~~ 331 (379)
|.+. +++....+.. .....+..++++|+++.++... ..++|++||+.+++.
T Consensus 345 ~~~~~~g~~~~~l~~----~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 345 RVATLKGKPVRTVQL----PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTCCEEEECCC----SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEeCCCCeeEEecC----CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8654 3443333211 1123467788999998776443 347899999877653
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=3.8e-14 Score=122.89 Aligned_cols=240 Identities=9% Similarity=0.002 Sum_probs=162.9
Q ss_pred ceEEEEECCCCCEEE-EeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecC
Q 016974 111 WVMTCAFSPTGQSVA-CGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDIT 189 (379)
Q Consensus 111 ~v~~~~~s~~g~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~ 189 (379)
....++++++|++++ +...++.|.+|+..... .......+...+..+++.+++ .++++.. ++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG-------TTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------------EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc-------cceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCC
Confidence 567889999999777 55778889999864321 111111222456678888865 4445544 8899999987
Q ss_pred CCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEee
Q 016974 190 TGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS 269 (379)
Q Consensus 190 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s 269 (379)
...... +. .........+++.+ +++++++...++.|.+|+...... ..........+.+++++|+|+++++..
T Consensus 96 ~~~~~~-~~----~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 96 SNNQTV-LP----FDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQ-TVLPFTGLNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CSCCEE-CC----CCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSC-EECCCCSCCSCCCEEECTTCCEEEEEG
T ss_pred CceEee-ee----cCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCcee-EeeccccCCCceeEEEeCCCCEEEEEC
Confidence 654322 21 12234678888886 567888877788999997653321 111122334678999999999888877
Q ss_pred CCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEE
Q 016974 270 DDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCL 349 (379)
Q Consensus 270 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 349 (379)
.++.|.+||........... .....+..++++++|.+.++...++.|++||.......... ..+...+.++
T Consensus 169 ~~~~i~~~~~~~~~~~~~~~-----~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~----~~~~~~p~~i 239 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVVLPF-----TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP----FTGLNTPLAV 239 (270)
T ss_dssp GGTEEEEECTTTCCEEECCC-----SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC----CCSCSCEEEE
T ss_pred CCCEEEEEecCCCceEeecc-----cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec----cCCCCCceeE
Confidence 78899999987655432111 11245789999999977777777889999997654332211 2233568899
Q ss_pred EECCCCCeEEEeeCCCcEEEEecCce
Q 016974 350 GLSADGSALCTGSWDTNLKIWAFGGY 375 (379)
Q Consensus 350 ~~s~d~~~l~s~s~D~~i~vw~~~~~ 375 (379)
+++++|+.+++.+.+++|++++....
T Consensus 240 ~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 240 AVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred EECCCCCEEEEECCCCEEEEEcCCCc
Confidence 99999999999999999999998763
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.67 E-value=3.7e-12 Score=111.77 Aligned_cols=280 Identities=7% Similarity=-0.013 Sum_probs=185.9
Q ss_pred cccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceee-EeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCC
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTH-AIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTD 143 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~ 143 (379)
.....+.++++.++|+.+++...++.|.+||.. ++... .+......+..++++++|.+.++...++.+..+|...
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g--- 92 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKG--- 92 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS---
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCC---
Confidence 344568899999999988888788999999987 54332 1222235688999999999888877788888887651
Q ss_pred CCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEE
Q 016974 144 KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFV 223 (379)
Q Consensus 144 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 223 (379)
... ..........+..+++.+++ .++++...++.|..+|.. +...... . ......+..+.+.+ ++++++
T Consensus 93 ---~~~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~-~---~~~~~~~~~i~~d~-~g~l~v 161 (300)
T 2qc5_A 93 ---GFT-EYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYD-L---PNKGSYPAFITLGS-DNALWF 161 (300)
T ss_dssp ---CEE-EEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEE-C---SSTTCCEEEEEECT-TSSEEE
T ss_pred ---CeE-EecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEcc-C---CCCCCCceeEEECC-CCCEEE
Confidence 111 11122233557788888764 456666668899999987 4433221 0 12334577888876 566777
Q ss_pred EecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEE
Q 016974 224 SGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSI 303 (379)
Q Consensus 224 sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 303 (379)
+...++.|..+|.. ..........+...+..++++++|..+++....+.|.+||. ++..... ... .....+.++
T Consensus 162 ~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~---~~~~~~~~i 235 (300)
T 2qc5_A 162 TENQNNSIGRITNT-GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY-DIP---TPNARPHAI 235 (300)
T ss_dssp EETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECS---STTCCEEEE
T ss_pred EecCCCeEEEECCC-CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE-ECC---CCCCCceEE
Confidence 77777889999873 32111112233456889999999988877777788999998 4543322 111 123457899
Q ss_pred EEccCCCEEEEEEecCcEEEEeCCCceEE-EecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEec
Q 016974 304 AFSISGRLLFAGYSNGDCYVWDTLLAKVV-LNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 304 ~fs~~g~~l~sg~~dg~i~iwd~~~~~~~-~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
+++++|++.++...++.|..||.. ++.. ..+ ......+.+++++++|++.++.. . .|..++.
T Consensus 236 ~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 236 TAGKNSEIWFTEWGANQIGRITND-NTIQEYQL----QTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EECSTTCEEEEETTTTEEEEECTT-SCEEEEEC----CSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred EECCCCCEEEeccCCCeEEEECCC-CcEEEEEC----CccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 999999976666567899999973 4332 212 22334578899999999777655 4 6655554
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=1.2e-13 Score=136.46 Aligned_cols=242 Identities=14% Similarity=0.044 Sum_probs=154.6
Q ss_pred cceEEEEECCCCCEEE-----EeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCe--
Q 016974 110 AWVMTCAFSPTGQSVA-----CGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQT-- 182 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~-----~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~-- 182 (379)
..+..++|||||++|| .|+.+..|++||+.+..... ...+.... ...++|+|++ ..|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-----~~~~~~~~--~~~~~wspDg-~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-----VDVIEGGK--YATPKWTPDS-KGFYYEWLPTDPS 192 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-----SCCBSCCT--TCCCEECTTS-SEEEEEECCCCTT
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-----CcccCccc--ccceEEecCC-CEEEEEEecCCCC
Confidence 4578899999999998 45556789999998643210 00111111 1467899986 56777777766
Q ss_pred -----------EEEeecCCCee--EEEecCccccCCccCeEEEEEeCCCCcEEEEecCCC----cEEEEEccCCccceEE
Q 016974 183 -----------CVLWDITTGLR--TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDS----TARLWDTRVASRAVRT 245 (379)
Q Consensus 183 -----------i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~----~i~vwd~~~~~~~~~~ 245 (379)
|.+|++.++.. ...+.. ..|...+..+.+++. +++++.++.++ .|.+|+.... ....
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~---~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~l~~~~~~~~--~~~~ 266 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHER---TGDPTTFLQSDLSRD-GKYLFVYILRGWSENDVYWKRPGEK--DFRL 266 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECC---CCCTTCEEEEEECTT-SCCEEEEEEETTTEEEEEEECTTCS--SCEE
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEec---CCCCEEEEEEEECCC-CCEEEEEEeCCCCceEEEEEcCCCC--ceEE
Confidence 99999987652 222211 234557788999984 55555555444 5666654322 3445
Q ss_pred EecccCCeeEEEEccCCCEEEEeeC----CCeEEEEECCCCce--eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC
Q 016974 246 FHGHEGDVNTVKFFPDGNRFGTGSD----DGTCRLFDIRTGHQ--LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG 319 (379)
Q Consensus 246 ~~~h~~~v~~v~~sp~g~~l~s~s~----D~~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg 319 (379)
+..+...+....+ |+|. ++..++ ++.|.+||+.++.. ...+.... ....+..++|+ ++.++++...|+
T Consensus 267 l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~l~~~~~~-~~~lv~~~~~dg 340 (695)
T 2bkl_A 267 LVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED---SSASLLSVSIV-GGHLSLEYLKDA 340 (695)
T ss_dssp EEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC---SSCEEEEEEEE-TTEEEEEEEETT
T ss_pred eecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC---CCCeEEEEEEE-CCEEEEEEEECC
Confidence 5566666677666 6666 544443 57899999977642 12222211 12347788888 778888899999
Q ss_pred cEEEEeCC-CceEEEecccccCCccCceeEEEECCCCCeEE----EeeCCCcEEEEecCc
Q 016974 320 DCYVWDTL-LAKVVLNLGSLQNSHEGRITCLGLSADGSALC----TGSWDTNLKIWAFGG 374 (379)
Q Consensus 320 ~i~iwd~~-~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~----s~s~D~~i~vw~~~~ 374 (379)
..++|... .++....+. ..+.+.|..++++||++.|+ +....++|++|++..
T Consensus 341 ~~~l~~~~~~g~~~~~l~---~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 341 TSEVRVATLKGKPVRTVQ---LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEEEEETTCCEEEECC---CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEEeCCCCeeEEec---CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 88777543 344333331 12356788889999998777 344457899999865
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.67 E-value=1.1e-12 Score=125.29 Aligned_cols=285 Identities=14% Similarity=0.150 Sum_probs=188.3
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECC--CCceeeEeecCCcceEEEEEC----CCCCEEEEeeC-CCcEEEEEcCCC
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNAL--TSQKTHAIKLPCAWVMTCAFS----PTGQSVACGGL-DSVCSIFNLNSP 141 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~~v~~~~~s----~~g~~l~~~~~-d~~i~iw~~~~~ 141 (379)
.+..+.|+|||++|++++.|+.|.+||+. +++.+..+.... ....++|+ |+|+++++++. ++.+.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 46789999999999999999999999995 777777777643 46789999 79998888776 589999996542
Q ss_pred CCCCCCcceeeeec--c--------ccc-ceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeE
Q 016974 142 TDKDGNLPVSRMLS--G--------HKG-YVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVL 210 (379)
Q Consensus 142 ~~~~~~~~~~~~~~--~--------h~~-~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
. ....+. + |.. .+..+..++++..++++...+|.|.++|..+........ ........
T Consensus 277 ~-------~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~----i~~~~~~~ 345 (567)
T 1qks_A 277 E-------PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE----ISAERFLH 345 (567)
T ss_dssp C-------EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE----EECCSSEE
T ss_pred c-------EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeee----eecccccc
Confidence 2 111111 1 212 566777788766677777788999999987643222111 01122345
Q ss_pred EEEEeCCCCcEE-EEecCCCcEEEEEccCCccceEEEec-----ccCCeeEEEEccCCCE-EEEee-CCCeEEEEECCC-
Q 016974 211 SVSISGSNSRMF-VSGSCDSTARLWDTRVASRAVRTFHG-----HEGDVNTVKFFPDGNR-FGTGS-DDGTCRLFDIRT- 281 (379)
Q Consensus 211 ~~~~~~~~~~~l-~sg~~d~~i~vwd~~~~~~~~~~~~~-----h~~~v~~v~~sp~g~~-l~s~s-~D~~i~iwd~~~- 281 (379)
.+.|++ ++++| ++...++.|.++|+.+. +.+..+.- |.+.-.. -++|++.. ++++. .+++|.++|..+
T Consensus 346 d~~~~p-dgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 346 DGGLDG-SHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp EEEECT-TSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CceECC-CCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 677887 45555 45556789999999865 44443332 3322212 25787544 45543 568999999887
Q ss_pred ------CceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEe-------cCcEEEEeCCCc-----e---EEEecc---c
Q 016974 282 ------GHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYS-------NGDCYVWDTLLA-----K---VVLNLG---S 337 (379)
Q Consensus 282 ------~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~-------dg~i~iwd~~~~-----~---~~~~~~---~ 337 (379)
.+.++.+... +. .-..+.++|+++++.+... .++|.++|..+. . ...... .
T Consensus 423 ~~~~~~~kvv~~i~~~-g~----g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~ 497 (567)
T 1qks_A 423 GHPDNAWKILDSFPAL-GG----GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG 497 (567)
T ss_dssp TCTTTBTSEEEEEECS-CS----CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHT
T ss_pred CCccccCEEEEEEecC-CC----CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccc
Confidence 4555555332 11 1134678999999988662 469999998765 2 111111 1
Q ss_pred ccCCccCceeEEEECCCCCeEEEeeC-----CCcEEEEecCc
Q 016974 338 LQNSHEGRITCLGLSADGSALCTGSW-----DTNLKIWAFGG 374 (379)
Q Consensus 338 ~~~~h~~~v~~~~~s~d~~~l~s~s~-----D~~i~vw~~~~ 374 (379)
+ ......+..+.|+|+|+.|..+.+ ++.|.|+|...
T Consensus 498 ~-~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 498 I-TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp C-CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred c-CCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 1 112346889999999998887654 78999998655
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=1.9e-13 Score=120.42 Aligned_cols=242 Identities=12% Similarity=0.109 Sum_probs=163.7
Q ss_pred ccccccccEEEEEeeCCCC-eEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC
Q 016974 62 TLQGHAGKVYSLDWTSERN-RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 62 ~l~gH~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~ 140 (379)
.+..+.....+++|+|+++ +++++..++.|.+||..++ ...+..+...+..++++|+|+++++...++.+.+||..+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 3444555678999999998 7888899999999998876 566666777789999999999988888888999998743
Q ss_pred CCCCCCCccee-eeeccc-ccceEEEEEecCCCceEEE----ee-------------CCCeEEEeecCCCeeEEEecCcc
Q 016974 141 PTDKDGNLPVS-RMLSGH-KGYVSCCQYVPDEDTHLIT----SS-------------GDQTCVLWDITTGLRTSVFGGEF 201 (379)
Q Consensus 141 ~~~~~~~~~~~-~~~~~h-~~~v~~~~~~~~~~~~l~s----~~-------------~d~~i~~wd~~~~~~~~~~~~~~ 201 (379)
.. .... ....+. ...+..+++.|++ .++++ |+ ..+.|..++.. +.... +
T Consensus 100 g~-----~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~---- 167 (296)
T 3e5z_A 100 GE-----WESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-P---- 167 (296)
T ss_dssp CC-----EEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-E----
T ss_pred Cc-----EEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE-e----
Confidence 21 1111 111111 1235568888875 45665 33 12355555544 33222 2
Q ss_pred ccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccc---eEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEE
Q 016974 202 QSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRA---VRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFD 278 (379)
Q Consensus 202 ~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~---~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd 278 (379)
..+......+++++ +++++++.+.++.|.+||+...... ...+..+...+..++++++|+++++. ++.|.+||
T Consensus 168 -~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 168 -IRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp -ECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred -ecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 23344567888987 5555588888899999998622222 22333455667889999999977766 78999999
Q ss_pred CCCCceeEEEeeccCCCCCCCeEEEEE-ccCCCEEEEEEecCcEEEEeCCCc
Q 016974 279 IRTGHQLQVYYQQHGENEIPHVTSIAF-SISGRLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~v~~~~f-s~~g~~l~sg~~dg~i~iwd~~~~ 329 (379)
.. ++.+..+... .. +++++| +|+++.|++++.+ .+..++..+.
T Consensus 244 ~~-g~~~~~~~~~-----~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~ 287 (296)
T 3e5z_A 244 PD-GDELGRVLTP-----QT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVR 287 (296)
T ss_dssp TT-SCEEEEEECS-----SC-CCEEEEESTTSCEEEEEETT-EEEEEECSCC
T ss_pred CC-CCEEEEEECC-----CC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccc
Confidence 86 6665554321 12 678999 6899999988776 4555565443
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=3.4e-13 Score=117.55 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=159.3
Q ss_pred CCCCeEEEEcCCCcEEEEECCCCceeeEeecCC-cceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeec
Q 016974 77 SERNRIVSASQDGRLIVWNALTSQKTHAIKLPC-AWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLS 155 (379)
Q Consensus 77 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 155 (379)
.++++|++++.|+.|++||.++++.+.++..+. ..+..++++|+|++++ +.++.+..||.+ ++ ....+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~------G~--~~W~~~ 72 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRD------GR--ELWNIA 72 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTT------SC--EEEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCC------CC--EEEEEc
Confidence 356899999999999999999999999988765 4678899999999998 346778888762 22 222333
Q ss_pred cc-ccceEEEEEecCCCceEEEeeC-CCeEEEeecCCCeeEEEecCccc-cCCccCeEEEEEeCCCCcEEEEecCCCcEE
Q 016974 156 GH-KGYVSCCQYVPDEDTHLITSSG-DQTCVLWDITTGLRTSVFGGEFQ-SGHTADVLSVSISGSNSRMFVSGSCDSTAR 232 (379)
Q Consensus 156 ~h-~~~v~~~~~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 232 (379)
.+ ...+.++.+.+++ +.+++.+. ++.+..+|. ++..+..+..... ..+......+.+.+ +++++++...++.|.
T Consensus 73 ~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 73 APAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVR 149 (276)
T ss_dssp CCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEE
T ss_pred CCCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEE
Confidence 32 3467888898876 56777666 778888886 4544433321100 11212233344554 678999999999999
Q ss_pred EEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCC-CCCCCeEEEEEccCCCE
Q 016974 233 LWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE-NEIPHVTSIAFSISGRL 311 (379)
Q Consensus 233 vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~fs~~g~~ 311 (379)
.||.. . +.+..+... ..+.++.+.++|+++++++.++.|..+|..+++.+-.+...... .....+..++..++|.+
T Consensus 150 ~~d~~-G-~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i 226 (276)
T 3no2_A 150 EIAPN-G-QLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGL 226 (276)
T ss_dssp EECTT-S-CEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCE
T ss_pred EECCC-C-CEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCE
Confidence 99986 4 566666543 45778888999999999999989999999989887766432111 12334788899999998
Q ss_pred EEEEE
Q 016974 312 LFAGY 316 (379)
Q Consensus 312 l~sg~ 316 (379)
+++.+
T Consensus 227 ~v~~~ 231 (276)
T 3no2_A 227 YICNW 231 (276)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87764
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=6.8e-14 Score=121.28 Aligned_cols=239 Identities=10% Similarity=-0.008 Sum_probs=160.0
Q ss_pred cEEEEEeeCCCCeEE-EEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 69 KVYSLDWTSERNRIV-SASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
...++++++++++++ +.+.++.|.+||..+.............+..++++++|+++++.. ++.+.+|+.+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~----- 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN----- 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC-----
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce-----
Confidence 467899999998777 557889999999765443222122234577899999999766666 8889999865421
Q ss_pred cceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecC
Q 016974 148 LPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSC 227 (379)
Q Consensus 148 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~ 227 (379)
...........+..+++.+++ .++++...++.|.+|+..+....... .........+++++ +++++++...
T Consensus 99 --~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~p~~i~~~~-~g~l~v~~~~ 169 (270)
T 1rwi_B 99 --QTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLP-----FTGLNDPDGVAVDN-SGNVYVTDTD 169 (270)
T ss_dssp --CEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECC-----CCSCCSCCCEEECT-TCCEEEEEGG
T ss_pred --EeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeec-----cccCCCceeEEEeC-CCCEEEEECC
Confidence 111111222457788998865 46666667889999986554332211 12223456777876 5568888777
Q ss_pred CCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEcc
Q 016974 228 DSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSI 307 (379)
Q Consensus 228 d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~ 307 (379)
++.|.+||..... .......+...+..++++++|..+++...++.|.+||........ .. ......+.++++++
T Consensus 170 ~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~----~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 170 NNRVVKLEAESNN-QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP----FTGLNTPLAVAVDS 243 (270)
T ss_dssp GTEEEEECTTTCC-EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC----CCSCSCEEEEEECT
T ss_pred CCEEEEEecCCCc-eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec----cCCCCCceeEEECC
Confidence 8899999976432 222122333568899999999888888788999999986543322 11 11123578999999
Q ss_pred CCCEEEEEEecCcEEEEeCCC
Q 016974 308 SGRLLFAGYSNGDCYVWDTLL 328 (379)
Q Consensus 308 ~g~~l~sg~~dg~i~iwd~~~ 328 (379)
+|+++++...++.|++++...
T Consensus 244 ~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 244 DRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TCCEEEEEGGGTEEEEECCCG
T ss_pred CCCEEEEECCCCEEEEEcCCC
Confidence 999888888899999998654
No 193
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=3.9e-13 Score=117.66 Aligned_cols=208 Identities=13% Similarity=0.175 Sum_probs=147.3
Q ss_pred ccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCc-cccCCccCeEEEEEeCCCCcEEEEecC-CCcEEE
Q 016974 156 GHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE-FQSGHTADVLSVSISGSNSRMFVSGSC-DSTARL 233 (379)
Q Consensus 156 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sg~~-d~~i~v 233 (379)
++-....++++.+++ .++++...++.|.+||.. +.....+... ...++...+..+++.+.++.++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 344567788898875 567777889999999987 4334333211 112345567888886557777777643 889999
Q ss_pred EEccCCccceEEEe-cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEE
Q 016974 234 WDTRVASRAVRTFH-GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLL 312 (379)
Q Consensus 234 wd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l 312 (379)
||.. . ..+..+. .+...+..++++|+|+++++...++.|.+||.. ++.+..+... .....+..++++|+|+++
T Consensus 105 ~d~~-g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~---~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 105 YNQY-G-QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS---KHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp ECTT-S-CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT---TTCSSEEEEEECSSSEEE
T ss_pred ECCC-C-cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC---CccCCcEEEEECCCCCEE
Confidence 9943 3 3444443 234568999999999988888888999999964 5554444221 123357899999999988
Q ss_pred EEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC-cEEEEecCc
Q 016974 313 FAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT-NLKIWAFGG 374 (379)
Q Consensus 313 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~-~i~vw~~~~ 374 (379)
++...++.|++||.. ++.+..+.. .++...+..++++++|+++++...++ .|++|+..+
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~--~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGG--EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESC--TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred EEECCCCEEEEEcCC-CCEEEEEcc--CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 877789999999974 444444421 22335678999999999999888886 999999765
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=7.1e-12 Score=113.97 Aligned_cols=277 Identities=11% Similarity=0.038 Sum_probs=173.1
Q ss_pred eCCCCeEEEEcC--CC---cEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEee----------CCCcEEEEEcCC
Q 016974 76 TSERNRIVSASQ--DG---RLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGG----------LDSVCSIFNLNS 140 (379)
Q Consensus 76 ~~~~~~l~s~s~--D~---~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~ 140 (379)
.|++++++.+.. .. +|.++|..+++.+..+...... .++|+|||+.++.+. .++.+.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356666665543 22 8899999999888777655443 899999999998886 367899999864
Q ss_pred CCCCCCCccee--eeecccccceEEEEEecCCCceEEEee-C-CCeEEEeecCCCeeEEE-ecCccccCCccCeEEEEEe
Q 016974 141 PTDKDGNLPVS--RMLSGHKGYVSCCQYVPDEDTHLITSS-G-DQTCVLWDITTGLRTSV-FGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 141 ~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~-~-d~~i~~wd~~~~~~~~~-~~~~~~~~h~~~v~~~~~~ 215 (379)
.... +..+.. .... +......+.++|++. +|+.+. . ++.|.++| .++..... +.. + . ++.+.
T Consensus 107 ~~~~-~~i~~~~~~~~~-~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~~i~~----~---~--~~~~~ 173 (373)
T 2mad_H 107 FLPI-ADIELPDAPRFD-VGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQLLSS----P---T--CYHIH 173 (373)
T ss_pred CcEE-EEEECCCccccc-cCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeEEcCC----C---c--eEEEE
Confidence 2210 000000 0000 012234678999875 555554 3 58899999 88866554 421 1 1 13334
Q ss_pred CCCCcEEEEecCCCcEEEEEccCCccceEEEe-----cccCC-eeEEEEccCCCEEEEeeCCCeEEEEECCCCce--eEE
Q 016974 216 GSNSRMFVSGSCDSTARLWDTRVASRAVRTFH-----GHEGD-VNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ--LQV 287 (379)
Q Consensus 216 ~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~-----~h~~~-v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~--~~~ 287 (379)
+...+.+++.+.||.+.++|. ... ...... ....+ .....+.+++..++..+.++.+.+.|+.+... +..
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~-~g~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~ 251 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDH-AGG-AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAP 251 (373)
T ss_pred eCCCceEEEEcCCCCEEEEEC-CCc-EEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeee
Confidence 445566777888999999998 543 221111 11112 12346677766555555788999999875431 121
Q ss_pred EeeccC----CC-CCCCeEEEEEccCCCEEEEEEe----------cCcEEEEeCCCceEEEecccccCCccCceeEEEEC
Q 016974 288 YYQQHG----EN-EIPHVTSIAFSISGRLLFAGYS----------NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLS 352 (379)
Q Consensus 288 ~~~~~~----~~-~~~~v~~~~fs~~g~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s 352 (379)
+..... .. .......+.|+|+++.++++.. .+.|.+.|..+.+.+..+. .+ ....+++|+
T Consensus 252 ~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~---~g--~~p~~i~~s 326 (373)
T 2mad_H 252 IDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LG--HDVDAISVA 326 (373)
T ss_pred eeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE---CC--CCcCeEEEC
Confidence 110000 00 0112345789999998877653 3579999999888877662 12 246889999
Q ss_pred CCCC-eEEEee-CCCcEEEEecCc
Q 016974 353 ADGS-ALCTGS-WDTNLKIWAFGG 374 (379)
Q Consensus 353 ~d~~-~l~s~s-~D~~i~vw~~~~ 374 (379)
|||+ .++++. .+++|.++|...
T Consensus 327 ~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 327 QDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCCCeEEEEEcCCCCeEEEEECCC
Confidence 9999 788877 489999999876
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=1.2e-13 Score=124.22 Aligned_cols=223 Identities=9% Similarity=0.094 Sum_probs=142.4
Q ss_pred ccEEEEEeeCCCCeEEEEcCC---C--cEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC------------
Q 016974 68 GKVYSLDWTSERNRIVSASQD---G--RLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD------------ 130 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D---~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d------------ 130 (379)
..+.++.|+|||++|+.++.+ + .|.+||+.+++.......+ . +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 357789999999999887754 3 3777888877655444433 3 8899999999998888643
Q ss_pred ---------------CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC-------eEEEeec
Q 016974 131 ---------------SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ-------TCVLWDI 188 (379)
Q Consensus 131 ---------------~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-------~i~~wd~ 188 (379)
..+.+|++.... ....+.. . .+..+.|+|++ +++++..+. ...+|.+
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~-------~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEE-------VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTE-------EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEE
T ss_pred cceeecCcccccCccceEEEEECCCCe-------EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEe
Confidence 457788876421 1122222 2 67788999976 666665542 3455544
Q ss_pred CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC--------CcEEEEEccCCccceEEEecccCCeeE-EEEc
Q 016974 189 TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD--------STARLWDTRVASRAVRTFHGHEGDVNT-VKFF 259 (379)
Q Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d--------~~i~vwd~~~~~~~~~~~~~h~~~v~~-v~~s 259 (379)
.++...... .+ ..+..+ +| +++.++.++.+ ..|.+|| .........+|...+.. +.|+
T Consensus 206 d~~~~~~l~------~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d---~~~~~~l~~~~~~~~~~~~~~s 272 (347)
T 2gop_A 206 EDGKEEKMF------EK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD---GKEVMGILDEVDRGVGQAKIKD 272 (347)
T ss_dssp ETTEEEEEE------EE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC---SSCEEESSTTCCSEEEEEEEET
T ss_pred CCCceEEec------cC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC---CCceEeccccCCcccCCccEEc
Confidence 444432222 12 334443 65 45555544433 3677777 22333333455677886 9999
Q ss_pred cCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcE-EEEeCC
Q 016974 260 PDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDC-YVWDTL 327 (379)
Q Consensus 260 p~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i-~iwd~~ 327 (379)
+| ++++++.|+.++|| +.+++.... ... ...|.+++|+| .++++++.++.. .+|...
T Consensus 273 -dg-~~~~~~~~~~~~l~-~~~g~~~~~-~~~-----~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 273 -GK-VYFTLFEEGSVNLY-IWDGEIKPI-AKG-----RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -TE-EEEEEEETTEEEEE-EESSSEEEE-ECS-----SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -Cc-EEEEEecCCcEEEE-EcCCceEEE-ecC-----CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 98 88999999999999 875554322 221 23588999999 677887777654 666554
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=6.6e-13 Score=132.05 Aligned_cols=241 Identities=13% Similarity=0.038 Sum_probs=152.0
Q ss_pred ceEEEEECCCCCEEEEeeCC-----CcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCe---
Q 016974 111 WVMTCAFSPTGQSVACGGLD-----SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQT--- 182 (379)
Q Consensus 111 ~v~~~~~s~~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~--- 182 (379)
.+...+|||||++|+.++.+ ..|++||+.+... ..... +...+..++|+|+ . .|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~------~~~~~--~~~~~~~~~wspD-~-~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP------LADEL--KWVKFSGLAWLGN-D-ALLYSRFAEPKEG 233 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE------EEEEE--EEEESCCCEESTT-S-EEEEEECCCC---
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC------CCccC--CCceeccEEEECC-C-EEEEEEecCcccc
Confidence 57788999999999887654 4699999875321 11111 1112346789998 5 4555555443
Q ss_pred -----------EEEeecCCCee--EEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-----CcEEEEEccCCccc-e
Q 016974 183 -----------CVLWDITTGLR--TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-----STARLWDTRVASRA-V 243 (379)
Q Consensus 183 -----------i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-----~~i~vwd~~~~~~~-~ 243 (379)
|.+|++.++.. ...+.. ..+...+..+.+++ ++++++..+.+ ..|.+||+...... .
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~---~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFAT---PELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECC---TTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEecc---CCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 88999877642 222221 22333578888987 55555555433 47999998754222 4
Q ss_pred EEEecccCCeeEEEEccCCCEEEEeeCC----CeEEEEECCCCc-eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec
Q 016974 244 RTFHGHEGDVNTVKFFPDGNRFGTGSDD----GTCRLFDIRTGH-QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN 318 (379)
Q Consensus 244 ~~~~~h~~~v~~v~~sp~g~~l~s~s~D----~~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d 318 (379)
..+..+...+.... +|+|+.|+..+++ +.|.+||+.++. ....+.... ...+..++++ ++.++++...|
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~----~~~l~~~~~~-~~~lv~~~~~d 383 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES----KDNLESVGIA-GNRLFASYIHD 383 (741)
T ss_dssp EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC----SSEEEEEEEE-BTEEEEEEEET
T ss_pred EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC----CCeEEEEEEE-CCEEEEEEEEC
Confidence 45555655555553 4899998888764 459999988752 333333221 1236677777 66788888889
Q ss_pred CcEEEEeCC-CceEEEecccccCCccCceeEEEECCCCCeEE----EeeCCCcEEEEecCc
Q 016974 319 GDCYVWDTL-LAKVVLNLGSLQNSHEGRITCLGLSADGSALC----TGSWDTNLKIWAFGG 374 (379)
Q Consensus 319 g~i~iwd~~-~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~----s~s~D~~i~vw~~~~ 374 (379)
+..+||... .++....+. ..+.+.|..++++||++.|+ +....++|++|++..
T Consensus 384 g~~~l~~~~~~g~~~~~l~---~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 384 AKSQVLAFDLDGKPAGAVS---LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp TEEEEEEEETTSCEEEECB---CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred CEEEEEEEeCCCCceeecc---CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 977766433 344444331 12356788999999998776 333457899999865
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.59 E-value=6.8e-12 Score=115.63 Aligned_cols=246 Identities=14% Similarity=0.034 Sum_probs=164.0
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCC--cEEEEEcCCCCCCCC
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDS--VCSIFNLNSPTDKDG 146 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~--~i~iw~~~~~~~~~~ 146 (379)
....|+|+++++++++...++.|++||..+++........ .... ++|+|+++.|+.+..++ .+.+++......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--- 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--- 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC---
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce---
Confidence 5789999999998888888899999999877655444442 2233 89999999998888866 577776543210
Q ss_pred Ccceeeee-cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCe-E-EEEEeCCCCcEEE
Q 016974 147 NLPVSRML-SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADV-L-SVSISGSNSRMFV 223 (379)
Q Consensus 147 ~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v-~-~~~~~~~~~~~l~ 223 (379)
......+ ..+...+.++++.|+++. |+.+..++.|..||..++......... ..++.... . .+++++.++.+++
T Consensus 207 -~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~-~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 -PTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLE-LSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp -EEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECC-CCSCCCCSSCCEEEEETTTTEEEE
T ss_pred -eEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEeccc-ccCCCCCCccccEEEeCCCCEEEE
Confidence 0011011 113345667888885544 444667889999999876533221100 11222222 2 8899987788888
Q ss_pred EecCCCcEEEEEccCCccceEEEeccc---------------CCeeEEEEccCCCEEEEee-CCCeEEEEECCCCceeEE
Q 016974 224 SGSCDSTARLWDTRVASRAVRTFHGHE---------------GDVNTVKFFPDGNRFGTGS-DDGTCRLFDIRTGHQLQV 287 (379)
Q Consensus 224 sg~~d~~i~vwd~~~~~~~~~~~~~h~---------------~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~~~~~~~~ 287 (379)
+...++.|+.|+.... ...+.++. .....++++|+|+++++-+ .++.|+.||+.++.. ..
T Consensus 284 ~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~ 359 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-ST 359 (409)
T ss_dssp EETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EE
T ss_pred EeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EE
Confidence 8888999999986532 33344432 3478999999999888888 889999999877753 33
Q ss_pred EeeccCC----------CCCCCeEEEEEccCCCEEEEEEecCcEEEEeC
Q 016974 288 YYQQHGE----------NEIPHVTSIAFSISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 288 ~~~~~~~----------~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~ 326 (379)
+...... ........++++++|.++++-..++.|+.+++
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 3221000 01234789999999887777777778877653
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=2.4e-12 Score=112.15 Aligned_cols=218 Identities=11% Similarity=-0.017 Sum_probs=153.1
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccc-cceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEec
Q 016974 120 TGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHK-GYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG 198 (379)
Q Consensus 120 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 198 (379)
.+++|++++.|+.|.+||..+. + ....+..+. ..+.++.+.|++ ++++ +.++.|..||. ++..+-.+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG-----~--~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK-----E--IVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT-----E--EEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC-----e--EEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEc
Confidence 4688999999999999997542 2 233344443 357788899975 5566 45788999998 676554442
Q ss_pred CccccCCccCeEEEEEeCCCCcEEEEecC-CCcEEEEEccCCccceEEEe------cccCCeeEEEEccCCCEEEEeeCC
Q 016974 199 GEFQSGHTADVLSVSISGSNSRMFVSGSC-DSTARLWDTRVASRAVRTFH------GHEGDVNTVKFFPDGNRFGTGSDD 271 (379)
Q Consensus 199 ~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-d~~i~vwd~~~~~~~~~~~~------~h~~~v~~v~~sp~g~~l~s~s~D 271 (379)
.+....+.++.+.+ +++++++.+. ++.|..+|. ..+.+..+. ++......+++.++|+++++.+.+
T Consensus 73 ----~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~--~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~ 145 (276)
T 3no2_A 73 ----APAGCEMQTARILP-DGNALVAWCGHPSTILEVNM--KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT 145 (276)
T ss_dssp ----CCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT--TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT
T ss_pred ----CCCCccccccEECC-CCCEEEEecCCCCEEEEEeC--CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC
Confidence 22223567777775 6778877766 666766664 234444443 222345667889999999999999
Q ss_pred CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccccc--CCccCceeEE
Q 016974 272 GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQ--NSHEGRITCL 349 (379)
Q Consensus 272 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~h~~~v~~~ 349 (379)
+.|..||.. |+.+-.+... ....++.+.++|++++++..++.|..+|..+++.+..+.... ......+..+
T Consensus 146 ~~v~~~d~~-G~~~w~~~~~------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 146 SEVREIAPN-GQLLNSVKLS------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp TEEEEECTT-SCEEEEEECS------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred CEEEEECCC-CCEEEEEECC------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccc
Confidence 999999987 8877665432 124567888999999998888899999998898887764321 1112347788
Q ss_pred EECCCCCeEEEee
Q 016974 350 GLSADGSALCTGS 362 (379)
Q Consensus 350 ~~s~d~~~l~s~s 362 (379)
+..++|+.+++.+
T Consensus 219 ~~~~~G~i~v~~~ 231 (276)
T 3no2_A 219 FPLQNGGLYICNW 231 (276)
T ss_dssp EECTTSCEEEEEE
T ss_pred eEcCCCCEEEEec
Confidence 8889999888763
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=1.8e-11 Score=111.22 Aligned_cols=243 Identities=12% Similarity=0.063 Sum_probs=158.1
Q ss_pred EEEeeCCCCeEEEEc----------CCCcEEEEECCCCceeeEeecC-------CcceEEEEECCCCCEEEEeeC--CCc
Q 016974 72 SLDWTSERNRIVSAS----------QDGRLIVWNALTSQKTHAIKLP-------CAWVMTCAFSPTGQSVACGGL--DSV 132 (379)
Q Consensus 72 ~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~~g~~l~~~~~--d~~ 132 (379)
.++++|||++|+.+. .+++|.+||..+.+....+... ......++|+|+|++|+.++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 3678999999988887776553 123457899999999998874 477
Q ss_pred EEEEEcCCCCCCCCCcceeee-ecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC-ccccCCccCeE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRM-LSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG-EFQSGHTADVL 210 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~ 210 (379)
|.++| .... .... +. ..+ ++.+.|++...+++.+.||.+.++|. ++........ ....+...-..
T Consensus 150 v~viD-~t~~-------~~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~ 216 (373)
T 2mad_H 150 VGLVV-QGGS-------SDDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred EEEEE-CCCC-------EEeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceee
Confidence 99998 6532 2222 21 111 24455666667778889999999999 7654422110 00001111111
Q ss_pred EEEEeCCCCcEEEEecCCCcEEEEEccCCc-cceEEEec----------ccCCeeEEEEccCCCEEEEeeC---------
Q 016974 211 SVSISGSNSRMFVSGSCDSTARLWDTRVAS-RAVRTFHG----------HEGDVNTVKFFPDGNRFGTGSD--------- 270 (379)
Q Consensus 211 ~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~~----------h~~~v~~v~~sp~g~~l~s~s~--------- 270 (379)
...+.+.++.+++.. ..+.+.+.|+.... ..+..+.- .......+.++|+++.+..+..
T Consensus 217 ~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~ 295 (373)
T 2mad_H 217 QPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHA 295 (373)
T ss_pred cceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccC
Confidence 223333344444443 67788888875331 11112210 0122344789999888776543
Q ss_pred -CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCC-EEEEEE-ecCcEEEEeCCCceEEEe
Q 016974 271 -DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGR-LLFAGY-SNGDCYVWDTLLAKVVLN 334 (379)
Q Consensus 271 -D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~-~dg~i~iwd~~~~~~~~~ 334 (379)
++.|.++|+.+++.+..+.... ...+++|+|||+ .++++. .++.|.++|..+++.+..
T Consensus 296 ~~~~V~VID~~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 296 AAKEVTSVTGLVGQTSSQISLGH------DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCeEEEEECCCCEEEEEEECCC------CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 3579999999988877663321 357899999999 777776 589999999998887766
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=1.8e-12 Score=115.92 Aligned_cols=242 Identities=9% Similarity=-0.005 Sum_probs=159.5
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
....+.+. +++.+++...+++|.+||..+++.+.++.. ......++++++++..++...++.+.+||..+..
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~------ 116 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE------ 116 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE------
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe------
Confidence 35667774 355666777789999999999998888853 3567889999999655555589999999986532
Q ss_pred ceeeeec-cc----ccceEEEEEecCCCceEEEee-CCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEE
Q 016974 149 PVSRMLS-GH----KGYVSCCQYVPDEDTHLITSS-GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMF 222 (379)
Q Consensus 149 ~~~~~~~-~h----~~~v~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 222 (379)
+...+. +. ......+++ +++..+++.. .+++|.++|+.++.....+... .....+.+++ +++++
T Consensus 117 -~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g------~~p~~i~~~~-dG~l~ 186 (328)
T 3dsm_A 117 -ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG------IQPTSLVMDK-YNKMW 186 (328)
T ss_dssp -EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS------SCBCCCEECT-TSEEE
T ss_pred -EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC------CCccceEEcC-CCCEE
Confidence 222222 11 112334555 3344444443 4899999999988765554321 1234566665 66777
Q ss_pred EEecCC----------CcEEEEEccCCccceEEEecc-cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeec
Q 016974 223 VSGSCD----------STARLWDTRVASRAVRTFHGH-EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQ 291 (379)
Q Consensus 223 ~sg~~d----------~~i~vwd~~~~~~~~~~~~~h-~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 291 (379)
+++..+ +.|.++|.... +....+.-. ......++|+|+++.|..+.. .|.+||+.+++.......
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~- 262 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETF-TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFL- 262 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTT-EEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSB-
T ss_pred EEECCCccCCccccCCceEEEEECCCC-eEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeee-
Confidence 776654 78999998754 344444321 236889999999998877654 899999988764311100
Q ss_pred cCCCCCCCeEEEEEcc-CCCEEEEE----EecCcEEEEeCCCceEEEec
Q 016974 292 HGENEIPHVTSIAFSI-SGRLLFAG----YSNGDCYVWDTLLAKVVLNL 335 (379)
Q Consensus 292 ~~~~~~~~v~~~~fs~-~g~~l~sg----~~dg~i~iwd~~~~~~~~~~ 335 (379)
.........++++| ++.+.++. ..++.|.+||.. ++.+..+
T Consensus 263 --~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 263 --EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp --CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred --cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 00123478999999 55555555 568899999987 7666554
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=2.8e-11 Score=106.10 Aligned_cols=242 Identities=9% Similarity=-0.010 Sum_probs=165.1
Q ss_pred CcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeec
Q 016974 109 CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDI 188 (379)
Q Consensus 109 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 188 (379)
...+.+++++++|.+.++...++.+.+||.. .. .. ......+...+..+.+.+++ .+.++...++.|..||.
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-----~~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GK-----IT-EYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITK 85 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-----EE-EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-----eE-EecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECC
Confidence 4568899999999988877778889999865 21 11 11112234567888888865 45666666889999998
Q ss_pred CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEe
Q 016974 189 TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTG 268 (379)
Q Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~ 268 (379)
.... ..+.. ......+..+.+.+ ++.++++...++.|..||. ...........+...+..++++|+|..+++.
T Consensus 86 ~g~~--~~~~~---~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 86 KGII--KEYTL---PNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp TSCE--EEEEC---SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CCcE--EEEeC---CCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 6322 12211 12344678888886 5678887777889999987 3322111222334568999999999888877
Q ss_pred eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeE
Q 016974 269 SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITC 348 (379)
Q Consensus 269 s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 348 (379)
..++.|..||. +++... +... .....+..++++++|++.++...++.|.+||. +++..... . ..+...+.+
T Consensus 159 ~~~~~i~~~~~-~g~~~~-~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~--~-~~~~~~~~~ 229 (299)
T 2z2n_A 159 NQNNAIGRITE-SGDITE-FKIP---TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK--I-PTPNARPHA 229 (299)
T ss_dssp TTTTEEEEECT-TCCEEE-EECS---STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE--C-SSTTCCEEE
T ss_pred CCCCEEEEEcC-CCcEEE-eeCC---CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE--C-CCCCCCcee
Confidence 77889999998 665433 2111 12335789999999997776666889999998 55533211 1 234457889
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 349 LGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 349 ~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++++++|+.+++...++.|..|+..+
T Consensus 230 i~~~~~g~l~v~~~~~~~i~~~d~~g 255 (299)
T 2z2n_A 230 ITAGAGIDLWFTEWGANKIGRLTSNN 255 (299)
T ss_dssp EEECSTTCEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCEEEeccCCceEEEECCCC
Confidence 99999999777766788999998754
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=6.4e-12 Score=111.23 Aligned_cols=248 Identities=10% Similarity=0.085 Sum_probs=157.0
Q ss_pred CcceEEEEECCCCCEEEE-------eeCCCcEEEEEcCCCCCCCCCcceee--eecccccceEEEEEecCCCceEEEeeC
Q 016974 109 CAWVMTCAFSPTGQSVAC-------GGLDSVCSIFNLNSPTDKDGNLPVSR--MLSGHKGYVSCCQYVPDEDTHLITSSG 179 (379)
Q Consensus 109 ~~~v~~~~~s~~g~~l~~-------~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~ 179 (379)
.....+++|+++|.++++ ...++.+.+|+..... ..... ...++...+..+.+.++++. |..++.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~ 90 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK-----KTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADM 90 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC-----EEEEECCEETTEECCEEEEEECSSSSE-EEEEET
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc-----EEEEEecccCCCCCCCceEEEecCCCc-EEEEEC
Confidence 345678899999988888 6778889999865321 11100 01124456888889886334 444444
Q ss_pred CCeEEEeecCCCeeEEE-ecCccccCCccCeEEEEEeCCCCcEEEEecCC---------------CcEEEEEccCCccce
Q 016974 180 DQTCVLWDITTGLRTSV-FGGEFQSGHTADVLSVSISGSNSRMFVSGSCD---------------STARLWDTRVASRAV 243 (379)
Q Consensus 180 d~~i~~wd~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d---------------~~i~vwd~~~~~~~~ 243 (379)
.+.|.+||.. +..... .. .........+..+.+.+ +++++++...+ +.|..||.. .. .
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~ 164 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKK-DSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQ-M 164 (314)
T ss_dssp TTEEEEEETT-SCEEECCSB-CTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SC-E
T ss_pred CCCEEEEeCC-CCEEEEEec-cCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC--CC-E
Confidence 5578899987 554322 21 10011224577888886 56777766554 456666643 22 2
Q ss_pred EEEecccCCeeEEEEc----cCCCEE-EEeeCCCeEEEEECC-CCcee--EEEeeccCCCCC-CCeEEEEEccCCCEEEE
Q 016974 244 RTFHGHEGDVNTVKFF----PDGNRF-GTGSDDGTCRLFDIR-TGHQL--QVYYQQHGENEI-PHVTSIAFSISGRLLFA 314 (379)
Q Consensus 244 ~~~~~h~~~v~~v~~s----p~g~~l-~s~s~D~~i~iwd~~-~~~~~--~~~~~~~~~~~~-~~v~~~~fs~~g~~l~s 314 (379)
..+..+......++|+ |+|+.+ ++...++.|.+||+. ++... ..+... .... ..+..++++++|++.++
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~--~~~~~~~p~~i~~d~~G~l~v~ 242 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI--PGTHEGGADGMDFDEDNNLLVA 242 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC--CCCSSCEEEEEEEBTTCCEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC--CCCCCCCCCceEECCCCCEEEE
Confidence 2333344567899999 999655 444578899999976 34321 111111 1111 34688999999998888
Q ss_pred EEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeE-EEeeCCCcEEEEecCc
Q 016974 315 GYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSAL-CTGSWDTNLKIWAFGG 374 (379)
Q Consensus 315 g~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-~s~s~D~~i~vw~~~~ 374 (379)
...++.|.+||..+++....+ ..+...+.+++|+|+|+.| ++...++.|..|++..
T Consensus 243 ~~~~~~i~~~d~~~g~~~~~~----~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQPKMRI----RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EETTTEEEEECTTCBSCSEEE----ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EcCCCEEEEEcCCCCcEeEEE----eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 878899999998755443333 2344678999999999955 4555678899998754
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.57 E-value=2.6e-12 Score=115.78 Aligned_cols=259 Identities=17% Similarity=0.222 Sum_probs=167.2
Q ss_pred EEEeeCCCCeEEEEc----------CCCcEEEEECCCCceeeEeecCC-------cceEEEEECCCCCEEEEeeC--CCc
Q 016974 72 SLDWTSERNRIVSAS----------QDGRLIVWNALTSQKTHAIKLPC-------AWVMTCAFSPTGQSVACGGL--DSV 132 (379)
Q Consensus 72 ~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~s~~g~~l~~~~~--d~~ 132 (379)
.++++|||++|+.++ .++.|.+||..+.+.+..+.... .....++|+|||+++..++. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999988775 36789999999999888876543 13456889999999888864 688
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCC-CeeEEEecCccccCCccCeE-
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT-GLRTSVFGGEFQSGHTADVL- 210 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~- 210 (379)
+.++|+.+.. +...+.-. + +....|.+...+++.+.||++.+.++.+ +....... .........+.
T Consensus 162 VsVID~~t~~-------vv~tI~v~-g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~~~~~~~~~~~~ 229 (386)
T 3sjl_D 162 VGVVDLEGKA-------FKRMLDVP-D---CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT-EVFHPEDEFLIN 229 (386)
T ss_dssp EEEEETTTTE-------EEEEEECC-S---EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-CCCSCTTSCBCS
T ss_pred EEEEECCCCc-------EEEEEECC-C---cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec-ceeccccccccc
Confidence 9999987532 22222211 1 1123354555677888899999998876 43222111 11011111121
Q ss_pred EEEEeCCCCcEEEEecCCCcEEEEEccCCcc-ceEEEe---------c-ccCCeeEEEEccCCCEEEEeeC---------
Q 016974 211 SVSISGSNSRMFVSGSCDSTARLWDTRVASR-AVRTFH---------G-HEGDVNTVKFFPDGNRFGTGSD--------- 270 (379)
Q Consensus 211 ~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~-~~~~~~---------~-h~~~v~~v~~sp~g~~l~s~s~--------- 270 (379)
...|.+.++++++ .+.+|.|.+.|...... ....+. + ..+....++++|+++.+.....
T Consensus 230 ~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 230 HPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp CCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred cceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 1244445666555 44578999999864321 111111 0 1223345788999888777642
Q ss_pred -CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCC-EEEEEE-ecCcEEEEeCCCceEEEecccccCCccCcee
Q 016974 271 -DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGR-LLFAGY-SNGDCYVWDTLLAKVVLNLGSLQNSHEGRIT 347 (379)
Q Consensus 271 -D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 347 (379)
.+.|.+.|+.+++.+..+.... .+.+++|++||+ +|++.. .++.|.++|..+++.+.++.. .+|. +
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg~------~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~--~~~p---~ 377 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMGH------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ--LGHG---P 377 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEE------EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC--CCSS---C
T ss_pred CCCEEEEEECCCCeEEEEEECCC------CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC--CCCC---c
Confidence 2579999999999887765432 367899999997 676654 588999999999998887743 2343 3
Q ss_pred EEEECCC
Q 016974 348 CLGLSAD 354 (379)
Q Consensus 348 ~~~~s~d 354 (379)
.+.+++|
T Consensus 378 ~l~~s~d 384 (386)
T 3sjl_D 378 QVITTAD 384 (386)
T ss_dssp CEEEECC
T ss_pred eeEECCc
Confidence 3445555
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.57 E-value=6.7e-13 Score=131.97 Aligned_cols=249 Identities=10% Similarity=0.066 Sum_probs=152.7
Q ss_pred cccccEEEEEeeCCCCeEEEEcCC-----CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCc-------
Q 016974 65 GHAGKVYSLDWTSERNRIVSASQD-----GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV------- 132 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~------- 132 (379)
+|...+..++|||||++||.++.+ .+|++||+.+++.... ..+...+..++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 344468899999999999877654 4699999999886543 222222356789999 99988887654
Q ss_pred -------EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-----CeEEEeecCCC--e-eEEEe
Q 016974 133 -------CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-----QTCVLWDITTG--L-RTSVF 197 (379)
Q Consensus 133 -------i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~--~-~~~~~ 197 (379)
|.+|++.++... .........+...+..+.|+|++. +|+..+.+ ..|.+||+.++ . .....
T Consensus 238 ~~~~~~~v~~~~lgt~~~~---~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSA---DQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -CCCCCEEEEEETTSCGGG---CEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cCCCCCEEEEEECCCCchh---CEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 788887643211 011112223434578899999864 55554433 48999999876 3 22222
Q ss_pred cCccccCCccCeEEEEEeCCCCcEEEEecC---CCcEEEEEccCC-ccceEEEecccCCeeEEEEccCCCEEEEeeCCCe
Q 016974 198 GGEFQSGHTADVLSVSISGSNSRMFVSGSC---DSTARLWDTRVA-SRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGT 273 (379)
Q Consensus 198 ~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~---d~~i~vwd~~~~-~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~ 273 (379)
.+...+.... ++.+..+++.... ++.|.+||+... ......+..+...+..++|+ ++.++++...|+.
T Consensus 314 ------~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 314 ------PDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK 385 (741)
T ss_dssp ------CSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE
T ss_pred ------CCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 2223333332 3434444444332 445999998653 13333444555556778887 5667788888998
Q ss_pred EEEEECC-CCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE----ecCcEEEEeCCCceE
Q 016974 274 CRLFDIR-TGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY----SNGDCYVWDTLLAKV 331 (379)
Q Consensus 274 i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~----~dg~i~iwd~~~~~~ 331 (379)
.+||.+. ++.....+.. .....+..++++|+++.|+... ..++|++||+.+++.
T Consensus 386 ~~l~~~~~~g~~~~~l~~----~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 386 SQVLAFDLDGKPAGAVSL----PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEEETTSCEEEECBC----SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEEEeCCCCceeeccC----CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7777543 3443333211 1134578899999998665332 357899999877663
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=5e-12 Score=111.92 Aligned_cols=240 Identities=11% Similarity=0.098 Sum_probs=155.0
Q ss_pred ccEEEEEeeCCCCeEEE-------EcCCCcEEEEECCCCceeeEeec-----CCcceEEEEECCC-CCEEEEeeCCCcEE
Q 016974 68 GKVYSLDWTSERNRIVS-------ASQDGRLIVWNALTSQKTHAIKL-----PCAWVMTCAFSPT-GQSVACGGLDSVCS 134 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s-------~s~D~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~-g~~l~~~~~d~~i~ 134 (379)
....+++|+++++++++ +..++.|.+||..+++... +.. +...+..++++++ |+++++... ..+.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-~~l~ 95 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADMR-LGLL 95 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEETT-TEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEECC-CCEE
Confidence 34678999999988877 6778999999987776532 222 3356889999999 765555543 4678
Q ss_pred EEEcCCCCCCCCCccee--eeecc-cccceEEEEEecCCCceEEEeeCC---------------CeEEEeecCCCeeEEE
Q 016974 135 IFNLNSPTDKDGNLPVS--RMLSG-HKGYVSCCQYVPDEDTHLITSSGD---------------QTCVLWDITTGLRTSV 196 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~--~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d---------------~~i~~wd~~~~~~~~~ 196 (379)
+||.+ .. .... ....+ ....+..+.+.+++ .+.++...+ +.|..||.. +.....
T Consensus 96 ~~d~~-g~-----~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 96 VVQTD-GT-----FEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp EEETT-SC-----EEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred EEeCC-CC-----EEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 88865 21 1100 00011 12346788898875 445554444 567777765 433222
Q ss_pred ecCccccCCccCeEEEEEe----CCCCcEEEEecCCCcEEEEEccCCcc-----ceEEEeccc-CCeeEEEEccCCCEEE
Q 016974 197 FGGEFQSGHTADVLSVSIS----GSNSRMFVSGSCDSTARLWDTRVASR-----AVRTFHGHE-GDVNTVKFFPDGNRFG 266 (379)
Q Consensus 197 ~~~~~~~~h~~~v~~~~~~----~~~~~~l~sg~~d~~i~vwd~~~~~~-----~~~~~~~h~-~~v~~v~~sp~g~~l~ 266 (379)
. .+......++++ +.+..++++...++.|.+||...... ....+.++. ..+..++++++|++++
T Consensus 168 ~------~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v 241 (314)
T 1pjx_A 168 D------TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV 241 (314)
T ss_dssp E------EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE
T ss_pred c------cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE
Confidence 1 122235667777 64334566667788999999752111 122223333 5678899999999888
Q ss_pred EeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEEeCCC
Q 016974 267 TGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVWDTLL 328 (379)
Q Consensus 267 s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~~~ 328 (379)
+...++.|.+||..+++.+..+... ...+.+++|+|+|+.|+.++ .++.|..|+...
T Consensus 242 ~~~~~~~i~~~d~~~g~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQPKMRIRCP-----FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECS-----SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCEEEEEcCCCCcEeEEEeCC-----CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 8888899999998866655444221 23589999999999665554 567899998754
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.53 E-value=2e-12 Score=127.58 Aligned_cols=249 Identities=10% Similarity=0.065 Sum_probs=158.8
Q ss_pred cccccEEEEEeeCCCCeEEE-----EcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCc-------
Q 016974 65 GHAGKVYSLDWTSERNRIVS-----ASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV------- 132 (379)
Q Consensus 65 gH~~~v~~~~~~~~~~~l~s-----~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~------- 132 (379)
+|...+..++|||||++||- |+.+.+|++||+.+++.+.. ..+......++|+ ||+.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 46667889999999998873 44446899999999986543 1111112467899 9999998888743
Q ss_pred ------EEEEEcCCCCCCCCCcceeeeecc-cccceEEEEEecCCCceEEEeeC---CCeEEEeecCCCe-eEEEecCcc
Q 016974 133 ------CSIFNLNSPTDKDGNLPVSRMLSG-HKGYVSCCQYVPDEDTHLITSSG---DQTCVLWDITTGL-RTSVFGGEF 201 (379)
Q Consensus 133 ------i~iw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~---d~~i~~wd~~~~~-~~~~~~~~~ 201 (379)
|.+|++.++... ......... |...+..+.|+|++...+++.+. ++.|.++|+.++. ....+
T Consensus 204 ~~~~~~v~~~~lgt~~~~---~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l---- 276 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQED---DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV---- 276 (693)
T ss_dssp -CCCCEEEEEETTSCGGG---CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE----
T ss_pred cCCCcEEEEEECCCCccc---ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE----
Confidence 888988754211 111222223 44456788999987654454442 3589999987652 12222
Q ss_pred ccCCccCeEEEEEeCCCCcEEEEecCC---CcEEEEEccCCcc-ceEEEecccCCeeEEEEccCCCEEEEeeCCC---eE
Q 016974 202 QSGHTADVLSVSISGSNSRMFVSGSCD---STARLWDTRVASR-AVRTFHGHEGDVNTVKFFPDGNRFGTGSDDG---TC 274 (379)
Q Consensus 202 ~~~h~~~v~~~~~~~~~~~~l~sg~~d---~~i~vwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~---~i 274 (379)
..+....... +++.++.+++....+ +.|..+|+..... ..+.+..|...+. .|+|++++|+....++ .|
T Consensus 277 -~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 277 -QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp -ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEE
T ss_pred -eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEE
Confidence 1233333333 344456666666554 5788888875432 2345666666665 8999999887776543 68
Q ss_pred EEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec----CcEEEEeCCCceE
Q 016974 275 RLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN----GDCYVWDTLLAKV 331 (379)
Q Consensus 275 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d----g~i~iwd~~~~~~ 331 (379)
++||+..+. ...+.. .....+..+.++++++.|+....+ ++|+.||+.+++.
T Consensus 353 ~~~d~~g~~-~~~l~~----p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 353 EQFDYEGKR-VREVAL----PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEECTTSCE-EEEECC----SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEECCCCe-eEEeec----CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 999987543 332211 122346777888898877766655 7899999876653
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=1e-11 Score=111.95 Aligned_cols=276 Identities=12% Similarity=0.029 Sum_probs=177.0
Q ss_pred eeCCCCeEEEEcC-----CCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEee----------CCCcEEEEEcC
Q 016974 75 WTSERNRIVSASQ-----DGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGG----------LDSVCSIFNLN 139 (379)
Q Consensus 75 ~~~~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~ 139 (379)
..|+++.++.... +++|.+.|..+++.+..+...... . ++++|+|++++.++ .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3577777766654 689999999999999888876655 3 99999999887765 36789999987
Q ss_pred CCCCCCCCcceeeeec-cc------ccceEEEEEecCCCceEEEee--CCCeEEEeecCCCeeEEEecCccccCCccCeE
Q 016974 140 SPTDKDGNLPVSRMLS-GH------KGYVSCCQYVPDEDTHLITSS--GDQTCVLWDITTGLRTSVFGGEFQSGHTADVL 210 (379)
Q Consensus 140 ~~~~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
+.. ....+. +. ......+.++|++. +++.+. .++.|.++|+.++.....+... + .
T Consensus 118 t~~-------v~~~I~v~~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~---g----~- 181 (386)
T 3sjl_D 118 TLL-------PTADIELPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVP---D----C- 181 (386)
T ss_dssp TCC-------EEEEEEETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC---S----E-
T ss_pred CCe-------EEEEEECCCccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECC---C----c-
Confidence 532 122111 10 01233468999875 455444 3789999999998776665321 1 1
Q ss_pred EEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEeccc----CCe-eEEEEc-cCCCEEEEeeCCCeEEEEECCCCce
Q 016974 211 SVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHE----GDV-NTVKFF-PDGNRFGTGSDDGTCRLFDIRTGHQ 284 (379)
Q Consensus 211 ~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~----~~v-~~v~~s-p~g~~l~s~s~D~~i~iwd~~~~~~ 284 (379)
.-+.|...+.|++.+.||.+-+.++....+.......+. .++ ....|. ++|+++. .+.++.+.+.|+.++..
T Consensus 182 -~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~ 259 (386)
T 3sjl_D 182 -YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA 259 (386)
T ss_dssp -EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC
T ss_pred -ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc
Confidence 112233455677888899999999875333322211111 122 124564 6775444 56689999999876542
Q ss_pred --eEEEe--ec---cCCCCCCCeEEEEEccCCCEEEEEEe----------cCcEEEEeCCCceEEEecccccCCccCcee
Q 016974 285 --LQVYY--QQ---HGENEIPHVTSIAFSISGRLLFAGYS----------NGDCYVWDTLLAKVVLNLGSLQNSHEGRIT 347 (379)
Q Consensus 285 --~~~~~--~~---~~~~~~~~v~~~~fs~~g~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 347 (379)
+..+. .. ...-.......++++++++.++.... ..+|.+.|..+.+.+..+.. + ..++
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v---g--~~~~ 334 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM---G--HEID 334 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---E--EEEC
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC---C--CCcc
Confidence 21111 00 00000112335778999998888653 24799999999988876631 2 3678
Q ss_pred EEEECCCCC-eEEEee-CCCcEEEEecCce
Q 016974 348 CLGLSADGS-ALCTGS-WDTNLKIWAFGGY 375 (379)
Q Consensus 348 ~~~~s~d~~-~l~s~s-~D~~i~vw~~~~~ 375 (379)
.|++++|++ .|+++. .+++|.++|...+
T Consensus 335 ~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 335 SINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 999999997 666654 4899999998663
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=6.5e-10 Score=97.34 Aligned_cols=242 Identities=9% Similarity=-0.030 Sum_probs=163.1
Q ss_pred CcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeec
Q 016974 109 CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDI 188 (379)
Q Consensus 109 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 188 (379)
.....+++++++|...++...++.+.+|+.. . .... ..+..+...+..+.+.+++ .+.++...++.|..||.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~-----~~~~-~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-G-----RIKE-FEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSK 90 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-----CEEE-EECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-C-----ceEE-EECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECC
Confidence 3567889999999988888788899999865 1 1111 1122233567788888765 45566566788999998
Q ss_pred CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEe
Q 016974 189 TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTG 268 (379)
Q Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~ 268 (379)
. +.... +.. ......+..+++.+ +++++++...++.|..+|.. .......+......+..+++.++|+.+++.
T Consensus 91 ~-g~~~~-~~~---~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 91 K-GGFTE-YPL---PQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp T-SCEEE-EEC---SSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred C-CCeEE-ecC---CCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 7 44322 211 12235677888875 66788877778889999876 322111222234568999999999977777
Q ss_pred eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeE
Q 016974 269 SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITC 348 (379)
Q Consensus 269 s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 348 (379)
..++.|..+|. +++... +.. ......+..++++++|++.++....+.|.+||. .++...... ..+...+.+
T Consensus 164 ~~~~~i~~~~~-~g~~~~-~~~---~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~---~~~~~~~~~ 234 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLEE-YPL---PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI---PTPNARPHA 234 (300)
T ss_dssp TTTTEEEEECT-TCCEEE-EEC---SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC---SSTTCCEEE
T ss_pred cCCCeEEEECC-CCcEEE-eeC---CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC---CCCCCCceE
Confidence 77889999998 555433 221 112345789999999987776666778999997 444332211 223456789
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 349 LGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 349 ~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
++++++|+..++...++.|..|+..+
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~~g 260 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITNDN 260 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECTTS
T ss_pred EEECCCCCEEEeccCCCeEEEECCCC
Confidence 99999999777766778999998754
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=4.7e-11 Score=109.48 Aligned_cols=274 Identities=11% Similarity=0.012 Sum_probs=174.7
Q ss_pred CCCCeEEEEcC-C----CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEee----------CCCcEEEEEcCCC
Q 016974 77 SERNRIVSASQ-D----GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGG----------LDSVCSIFNLNSP 141 (379)
Q Consensus 77 ~~~~~l~s~s~-D----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~~ 141 (379)
++++.++.... + ++|.+.|..+.+.+.++...... .++++|+|++++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 35555554433 2 79999999999999998877665 899999999888776 3678999987653
Q ss_pred CCCCCCcceeeeec-c------cccceEEEEEecCCCceEEEeeC--CCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 142 TDKDGNLPVSRMLS-G------HKGYVSCCQYVPDEDTHLITSSG--DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 142 ~~~~~~~~~~~~~~-~------h~~~v~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
. ....+. + .......+.++|++. +++.+.. +++|.+.|+.++.....+.. +. . .
T Consensus 160 ~-------vv~~I~v~g~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~v----~g---~--~ 222 (426)
T 3c75_H 160 L-------PIADIELPDAPRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLDV----PD---C--Y 222 (426)
T ss_dssp C-------EEEEEEETTCCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEEC----CS---E--E
T ss_pred c-------EEEEEECCCccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEEc----CC---c--e
Confidence 2 111111 1 001123467889875 4555443 68999999999876655532 11 1 1
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCccceEEE----ecccCC-eeEEEEccCCCEEEEeeCCCeEEEEECCCCceeE-
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF----HGHEGD-VNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQ- 286 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~----~~h~~~-v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~- 286 (379)
...|.....+++.+.||.+.+.+.... +..... .....+ ...+.|.+++..++..+..+.+.+.|+.......
T Consensus 223 ~~~p~g~~~~v~~~~dG~~~~V~~~~~-~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 223 HIFPASPTVFYMNCRDGSLARVDFADG-ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFR 301 (426)
T ss_dssp EEEEEETTEEEEEETTSSEEEEECCTT-CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEEC
T ss_pred eeccCCCcEEEEEcCCCCEEEEECCCC-cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEe
Confidence 122223356667777888888887322 322111 111111 1235778998888777888999999986543211
Q ss_pred -EEeec--cCCC---CCCCeEEEEEccCCCEEEEEEe----------cCcEEEEeCCCceEEEecccccCCccCceeEEE
Q 016974 287 -VYYQQ--HGEN---EIPHVTSIAFSISGRLLFAGYS----------NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLG 350 (379)
Q Consensus 287 -~~~~~--~~~~---~~~~v~~~~fs~~g~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 350 (379)
.+... .... .......++|+|+|+.+++... .+.|.+.|..+.+.+..+.. + .....++
T Consensus 302 ~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v---g--~~P~gia 376 (426)
T 3c75_H 302 APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL---G--HEIDSIN 376 (426)
T ss_dssp CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---E--EEECEEE
T ss_pred eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC---C--CCcCeEE
Confidence 11100 0000 0001123689999998777653 34799999999988876631 1 2468899
Q ss_pred ECCCCC-eEEEeeC-CCcEEEEecCce
Q 016974 351 LSADGS-ALCTGSW-DTNLKIWAFGGY 375 (379)
Q Consensus 351 ~s~d~~-~l~s~s~-D~~i~vw~~~~~ 375 (379)
|+|||+ .|+++.+ +++|.|+|...+
T Consensus 377 ~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 377 VSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 999999 8888884 999999998763
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.46 E-value=4.8e-10 Score=98.66 Aligned_cols=231 Identities=14% Similarity=0.132 Sum_probs=147.6
Q ss_pred cccEEEEEeeCCC-CeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCC
Q 016974 67 AGKVYSLDWTSER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 67 ~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~ 145 (379)
..--.+..|++++ .++++...++.|..||..+++. ..+.. ...+.+++++|+|+++++. +..+.+||..+.
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g---- 83 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-DAPVSSVALRQSGGYVATI--GTKFCALNWKEQ---- 83 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTT----
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-CCceEEEEECCCCCEEEEE--CCeEEEEECCCC----
Confidence 3345678899964 4567777889999999887654 33333 3568899999999966654 567888887642
Q ss_pred CCcceeeeec-c-cccceEEEEEecCCCceEEEeeC---------CCeEEEeecCC-CeeEEEecCccccCCccCeEEEE
Q 016974 146 GNLPVSRMLS-G-HKGYVSCCQYVPDEDTHLITSSG---------DQTCVLWDITT-GLRTSVFGGEFQSGHTADVLSVS 213 (379)
Q Consensus 146 ~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~l~s~~~---------d~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
......... + ....+..+.+.|++. ++++... ...-.+|.+.. +...... .+......++
T Consensus 84 -~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~------~~~~~pngi~ 155 (297)
T 3g4e_A 84 -SAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF------DQVDISNGLD 155 (297)
T ss_dssp -EEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE------EEESBEEEEE
T ss_pred -cEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEEEEe------eccccccceE
Confidence 111111111 1 123467888988764 4443321 12334554432 2222111 1223456788
Q ss_pred EeCCCCcEEEEecCCCcEEEEEcc--CCc----cceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEE
Q 016974 214 ISGSNSRMFVSGSCDSTARLWDTR--VAS----RAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQV 287 (379)
Q Consensus 214 ~~~~~~~~l~sg~~d~~i~vwd~~--~~~----~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~ 287 (379)
+++....++++.+.++.|.+||+. ... +....+..+......++++++|++.++...++.|..||..+++.+..
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 887555566777888999999874 221 11222233445678999999999888888888999999988887766
Q ss_pred EeeccCCCCCCCeEEEEEc-cCCCEEEEEEec
Q 016974 288 YYQQHGENEIPHVTSIAFS-ISGRLLFAGYSN 318 (379)
Q Consensus 288 ~~~~~~~~~~~~v~~~~fs-~~g~~l~sg~~d 318 (379)
+... ...+++++|+ |+++.|+..+..
T Consensus 236 i~~p-----~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 236 VKLP-----VDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EECS-----SSBEEEEEEESGGGCEEEEEEBC
T ss_pred EECC-----CCCceEEEEeCCCCCEEEEEcCC
Confidence 5432 2358999998 898877766543
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.46 E-value=4.9e-10 Score=98.57 Aligned_cols=234 Identities=12% Similarity=0.100 Sum_probs=148.2
Q ss_pred CcceEEEEECCCC-CEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEee
Q 016974 109 CAWVMTCAFSPTG-QSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWD 187 (379)
Q Consensus 109 ~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd 187 (379)
....-...|+|++ .++.+...++.|..||..... . .. ......+.++++.+++. |+.+. ++.|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~-----~---~~-~~~~~~~~~i~~~~dG~--l~v~~-~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ-----V---QR-VTMDAPVSSVALRQSGG--YVATI-GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-----E---EE-EECSSCEEEEEEBTTSS--EEEEE-TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc-----E---EE-EeCCCceEEEEECCCCC--EEEEE-CCeEEEEE
Confidence 3345567888854 556666678899999976422 1 11 12345688899998764 44444 57899999
Q ss_pred cCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecC---------CCcEEEEEccCCccceEEEecccCCeeEEEE
Q 016974 188 ITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSC---------DSTARLWDTRVASRAVRTFHGHEGDVNTVKF 258 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~---------d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~ 258 (379)
..++......... .......+..+.+++ +++++++... ...-.+|.+..... ...+..+....+.++|
T Consensus 80 ~~~g~~~~~~~~~-~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSAVVLATVD-NDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDW 156 (297)
T ss_dssp TTTTEEEEEEECC-TTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEE
T ss_pred CCCCcEEEEEecC-CCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEE
Confidence 9877543332111 011224467888886 5666665432 23345665543322 2223344456789999
Q ss_pred ccCCCEE-EEeeCCCeEEEEEC--CCCcee--EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEE
Q 016974 259 FPDGNRF-GTGSDDGTCRLFDI--RTGHQL--QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVL 333 (379)
Q Consensus 259 sp~g~~l-~s~s~D~~i~iwd~--~~~~~~--~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~ 333 (379)
+|+++.| ++.+.++.|.+||+ .++... ..+... .........++++++|++.++....+.|.+||..+++...
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~--~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL--EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC--CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC--CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 9999866 55567889999987 455432 122111 1112346789999999888877778889999988777766
Q ss_pred ecccccCCccCceeEEEEC-CCCCeEEEeeC
Q 016974 334 NLGSLQNSHEGRITCLGLS-ADGSALCTGSW 363 (379)
Q Consensus 334 ~~~~~~~~h~~~v~~~~~s-~d~~~l~s~s~ 363 (379)
.+ ..+...+++++|. ||++.|..++.
T Consensus 235 ~i----~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TV----KLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EE----ECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EE----ECCCCCceEEEEeCCCCCEEEEEcC
Confidence 55 2344578999998 88887765543
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.45 E-value=3.3e-12 Score=115.53 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=127.2
Q ss_pred ceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEE-----ecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEE
Q 016974 160 YVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV-----FGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLW 234 (379)
Q Consensus 160 ~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vw 234 (379)
.++.+++++.. ..+++|+.++ +++|++.+...... ++......+.. |..+.| ++++|+++ .++.|++|
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 46778888875 4677888774 55598653220000 11101123445 899999 55678877 88999999
Q ss_pred EccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEE
Q 016974 235 DTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFA 314 (379)
Q Consensus 235 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~s 314 (379)
|++... .......|...+.++.+.+. .++++..||.+.+||+.++..... ...|++++|||+| ++.
T Consensus 112 dv~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~---------~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 112 DLEELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL---------AQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp ESSSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE---------EESEEEEEECSSE--EEE
T ss_pred Echhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc---------cCCceEEEEcCCc--eEE
Confidence 998654 34455677888988887654 388899999999999997765431 1259999999999 678
Q ss_pred EEecCcEEEEeCCCceE--EEeccc---cc--CCccCceeEEEECCCCCeEEE
Q 016974 315 GYSNGDCYVWDTLLAKV--VLNLGS---LQ--NSHEGRITCLGLSADGSALCT 360 (379)
Q Consensus 315 g~~dg~i~iwd~~~~~~--~~~~~~---~~--~~h~~~v~~~~~s~d~~~l~s 360 (379)
|..||++++|+...... ..++.. .. .+|...|.+|.|.++++++++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999998766553 333311 01 146788999999999999997
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=2.5e-11 Score=109.26 Aligned_cols=262 Identities=10% Similarity=0.025 Sum_probs=161.3
Q ss_pred ccEEEEEeeCCCCeEEEEc--CCCcEEEEECCCCceeeEe-------ecCCcceEEEEECCCCCEEEEeeC-----CCcE
Q 016974 68 GKVYSLDWTSERNRIVSAS--QDGRLIVWNALTSQKTHAI-------KLPCAWVMTCAFSPTGQSVACGGL-----DSVC 133 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~s~~g~~l~~~~~-----d~~i 133 (379)
.....++++++|+.+++.. .++.++||.+.+++ +..+ ..+...+..++++++|++.++-.. +..+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5688999999999988864 23436666654443 2222 123457899999999987776543 5789
Q ss_pred EEEEcCCCCCCCCCcceeeeec------ccccceEEEEEecCCCceEEEee---CCCeEEEeecCCCeeEEEecCccccC
Q 016974 134 SIFNLNSPTDKDGNLPVSRMLS------GHKGYVSCCQYVPDEDTHLITSS---GDQTCVLWDITTGLRTSVFGGEFQSG 204 (379)
Q Consensus 134 ~iw~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~---~d~~i~~wd~~~~~~~~~~~~~~~~~ 204 (379)
.+||+.+.. ..+.+. .+...+..+++.++++..+++-. .++.|.+||+.++.....+. +
T Consensus 96 ~~~d~~tg~-------~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-----~ 163 (343)
T 2qe8_A 96 VAWDTLNNQ-------LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-----G 163 (343)
T ss_dssp EEEETTTTE-------EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-----T
T ss_pred EEEECCCCe-------EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-----C
Confidence 999986422 111111 12234577888876555556655 68899999998776554442 1
Q ss_pred CccCeE-EEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCC-eEEEEECC--
Q 016974 205 HTADVL-SVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDG-TCRLFDIR-- 280 (379)
Q Consensus 205 h~~~v~-~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~-~i~iwd~~-- 280 (379)
|..... ...+.. ++..+.+.+.++.++.|. ..++.++|+|+|+.|+.+..++ .+..++..
T Consensus 164 ~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~ 227 (343)
T 2qe8_A 164 YPGIAPEDIDLVI-DGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADL 227 (343)
T ss_dssp CTTTSCCSCCCEE-TTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHH
T ss_pred CCcccccccceeE-CCEEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHh
Confidence 111000 011111 344566666777765553 1357799999999888777655 45444431
Q ss_pred -CCc--------eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEE
Q 016974 281 -TGH--------QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGL 351 (379)
Q Consensus 281 -~~~--------~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 351 (379)
.+. .+... .. .+....++++++|.+.++...++.|.+||..+++...... ..+-....+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~-g~-----~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~---~~~~~~p~~va~ 298 (343)
T 2qe8_A 228 SNLQLTDAELGSKIERY-SE-----KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT---DEKLSWTDSFNF 298 (343)
T ss_dssp TCTTCCHHHHHTTCEEE-EE-----CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE---CGGGSCEEEEEE
T ss_pred cCCCCChhhhhcceEec-cc-----CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE---CCceecCCeeEE
Confidence 110 00110 00 1124578999999999988889999999974455322221 112346789999
Q ss_pred CCCCCeEEEeeCCCcE
Q 016974 352 SADGSALCTGSWDTNL 367 (379)
Q Consensus 352 s~d~~~l~s~s~D~~i 367 (379)
+++|+++++.+..+.+
T Consensus 299 ~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 299 GSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CTTSCEEEEECCGGGS
T ss_pred CCCCcEEEEeCccccc
Confidence 9999988887755444
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.41 E-value=4.4e-12 Score=114.71 Aligned_cols=183 Identities=11% Similarity=0.038 Sum_probs=126.6
Q ss_pred cceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCC----CCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEE
Q 016974 110 AWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTD----KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVL 185 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~ 185 (379)
..+..+++++...++++|+.++ +.+|++..... ..+..... ....+.+ |+.++| + +.+|+.+ .++.|++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~-~~~~lp~-V~~l~f--d-~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFK-WEKEIPD-VIFVCF--H-GDQVLVS-TRNALYS 110 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCS-EEEECTT-EEEEEE--E-TTEEEEE-ESSEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccce-EEeeCCC-eeEEEE--C-CCEEEEE-cCCcEEE
Confidence 3578899999999999999985 55699753210 00011111 1223556 999999 4 4677777 8899999
Q ss_pred eecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEE
Q 016974 186 WDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRF 265 (379)
Q Consensus 186 wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l 265 (379)
||+.+....... ..|...+.++.+.++ + +++++.||.|.+||+.... ... +...|.|++|||+| +
T Consensus 111 ~dv~sl~~~~~~-----~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~-~~~----~~~~Vs~v~WSpkG--~ 175 (388)
T 1xip_A 111 LDLEELSEFRTV-----TSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKS-TKQ----LAQNVTSFDVTNSQ--L 175 (388)
T ss_dssp EESSSTTCEEEE-----EECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCC-EEE----EEESEEEEEECSSE--E
T ss_pred EEchhhhccCcc-----ceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCc-ccc----ccCCceEEEEcCCc--e
Confidence 998765433222 345566777776654 2 7888999999999998543 221 45689999999999 7
Q ss_pred EEeeCCCeEEEEECCCCce--eEEEeec----cCCCCCCCeEEEEEccCCCEEEE
Q 016974 266 GTGSDDGTCRLFDIRTGHQ--LQVYYQQ----HGENEIPHVTSIAFSISGRLLFA 314 (379)
Q Consensus 266 ~s~s~D~~i~iwd~~~~~~--~~~~~~~----~~~~~~~~v~~~~fs~~g~~l~s 314 (379)
+.|..||++++|+...+.. ...+..+ ....+...|.++.|.++++++++
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 7899999999999876653 2233111 00112356999999999999887
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.40 E-value=1e-10 Score=107.26 Aligned_cols=246 Identities=15% Similarity=0.184 Sum_probs=156.0
Q ss_pred EEEeeCCCCeEEEEc----------CCCcEEEEECCCCceeeEeecC-------CcceEEEEECCCCCEEEEeeC--CCc
Q 016974 72 SLDWTSERNRIVSAS----------QDGRLIVWNALTSQKTHAIKLP-------CAWVMTCAFSPTGQSVACGGL--DSV 132 (379)
Q Consensus 72 ~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~~g~~l~~~~~--d~~ 132 (379)
.+.++||+++|+.+. .++.|.++|..+.+....+... ......++|+|||++++.++. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999988776 4779999999999988887654 122346789999999998874 578
Q ss_pred EEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEE
Q 016974 133 CSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSV 212 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
+.+.|+.+.. +...+.-- + +....|++...+++.+.||++.+.+..++.........+..+.......+
T Consensus 202 VsVID~~t~k-------vv~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~ 270 (426)
T 3c75_H 202 VGVVDLEGKT-------FDRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP 270 (426)
T ss_dssp EEEEETTTTE-------EEEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred EEEEECCCCe-------EEEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence 9999987532 22222210 1 12334444455667777888777777544332111000001111111123
Q ss_pred EEeCCCCcEEEEecCCCcEEEEEccCCccce-EEEe-------c---ccCCeeEEEEccCCCEEEEeeC----------C
Q 016974 213 SISGSNSRMFVSGSCDSTARLWDTRVASRAV-RTFH-------G---HEGDVNTVKFFPDGNRFGTGSD----------D 271 (379)
Q Consensus 213 ~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~-~~~~-------~---h~~~v~~v~~sp~g~~l~s~s~----------D 271 (379)
.+.+....++++ +..+.+.+.|.......+ ..+. . .......++++|+++.+..... +
T Consensus 271 ~~~~dg~~~~~~-s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 271 AFSLRSGRLVWP-TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp EECTTTCEEEEE-BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eecCCCCEEEEE-eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 345444444444 457889898875321100 0010 0 0112233789999887666532 3
Q ss_pred CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCC-EEEEEE-ecCcEEEEeCCCceEEEec
Q 016974 272 GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGR-LLFAGY-SNGDCYVWDTLLAKVVLNL 335 (379)
Q Consensus 272 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~-~l~sg~-~dg~i~iwd~~~~~~~~~~ 335 (379)
+.|.++|+.+.+.+..+.... ....++|+|||+ ++++.. .++.|.++|..+.+.+..+
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~------~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGH------EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEE------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCC------CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 579999999999887775422 257899999999 888887 5899999999999888765
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.40 E-value=1.2e-09 Score=100.52 Aligned_cols=246 Identities=10% Similarity=0.115 Sum_probs=157.4
Q ss_pred ceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC--eEEEeec
Q 016974 111 WVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ--TCVLWDI 188 (379)
Q Consensus 111 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--~i~~wd~ 188 (379)
....++|+++|+++++...++.|++||..... +...... ..... ++|.|++. .|+.+..++ .|.+||.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-------~~~~~~~-~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-------VTTVHPG-FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTE-------EEEEEET-CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCE-------EEEeecc-CCCCc-eeEecCCC-cEEEEecCCCceEEEEEc
Confidence 46789999999988888888999999986421 1111222 12223 78888764 566666655 7888888
Q ss_pred CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEE-----ecccCCe--eEEEEccC
Q 016974 189 TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF-----HGHEGDV--NTVKFFPD 261 (379)
Q Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~-----~~h~~~v--~~v~~sp~ 261 (379)
..+.....+. ...........++++++.++.+++ +..++.|+.||..... ...+ .++...- +.++|+|+
T Consensus 202 ~~~~~~~~~g-~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 202 ASGWAPTRIG-QLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp GGTTCEEEEE-ECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred CCCceeEEee-eccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCC
Confidence 7654322221 000113345667888876666666 5568899999986442 2222 1222222 39999994
Q ss_pred -CCEEEEeeCCCeEEEEECCCCceeEEEeeccCC----------CCCCCeEEEEEccCCCEEEEEE-ecCcEEEEeCCCc
Q 016974 262 -GNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE----------NEIPHVTSIAFSISGRLLFAGY-SNGDCYVWDTLLA 329 (379)
Q Consensus 262 -g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~----------~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~~~~ 329 (379)
+.++++-..++.|+.|+.... +..+...... ........++|+|+|+++++-. .++.|+.||...+
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 666677778889999997643 2333221100 0123478999999999777766 7889999997666
Q ss_pred eEEEecccc-cCC---------ccCceeEEEECCCCCeEEEeeCCCcEEEEec
Q 016974 330 KVVLNLGSL-QNS---------HEGRITCLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 330 ~~~~~~~~~-~~~---------h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
......+.. ..+ .-.....++++++|.++++-..++.|+.+++
T Consensus 356 ~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 356 YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 654332210 000 1235789999999988888888889988775
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=6.3e-10 Score=98.27 Aligned_cols=239 Identities=9% Similarity=0.066 Sum_probs=147.3
Q ss_pred eeEeecCCcceEEEEECCCCC-EEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC
Q 016974 102 THAIKLPCAWVMTCAFSPTGQ-SVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD 180 (379)
Q Consensus 102 ~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 180 (379)
+..+.....+....+|+|+|+ ++.+...++.+..|+... . ...+..+...+..+.+.+++ .++++...+
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g------~---~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~ 106 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG------T---VDVLLDATAFTNGNAVDAQQ-RLVHCEHGR 106 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS------C---EEEEEESCSCEEEEEECTTS-CEEEEETTT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC------C---EEEEeCCCCccceeeECCCC-CEEEEECCC
Confidence 334444455677888999998 566667788899997632 1 12233345667888998875 455555566
Q ss_pred CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE----ecC-------------CCcEEEEEccCCccce
Q 016974 181 QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS----GSC-------------DSTARLWDTRVASRAV 243 (379)
Q Consensus 181 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s----g~~-------------d~~i~vwd~~~~~~~~ 243 (379)
+.|.+||.. +...... ..........+..+.+.+ ++++++| |.. .+.|..||.... +..
T Consensus 107 ~~v~~~~~~-g~~~~~~-~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-~~~ 182 (305)
T 3dr2_A 107 RAITRSDAD-GQAHLLV-GRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-PLQ 182 (305)
T ss_dssp TEEEEECTT-SCEEEEE-CEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-CCE
T ss_pred CEEEEECCC-CCEEEEE-eccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-cEE
Confidence 889999975 4332221 111111113355677776 6778876 432 245666665333 222
Q ss_pred EEEecccCCeeEEEEccCCCEEEEeeCC------CeEEEEECCCCceeE---EEeeccCCCCCCCeEEEEEccCCCEEEE
Q 016974 244 RTFHGHEGDVNTVKFFPDGNRFGTGSDD------GTCRLFDIRTGHQLQ---VYYQQHGENEIPHVTSIAFSISGRLLFA 314 (379)
Q Consensus 244 ~~~~~h~~~v~~v~~sp~g~~l~s~s~D------~~i~iwd~~~~~~~~---~~~~~~~~~~~~~v~~~~fs~~g~~l~s 314 (379)
.+. .....+.++|+||++.|+.+... +.|.+|++..+. +. .+.. . .......++++++|++.+
T Consensus 183 -~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~-~---~~~~pdgi~~d~~G~lwv- 254 (305)
T 3dr2_A 183 -RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS-V---PDGLPDGFCVDRGGWLWS- 254 (305)
T ss_dssp -EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC-C---SSSCCCSEEECTTSCEEE-
T ss_pred -EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE-C---CCCCCCeEEECCCCCEEE-
Confidence 222 44567889999999977766554 789999987653 21 1111 1 112245688999999544
Q ss_pred EEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEE
Q 016974 315 GYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKI 369 (379)
Q Consensus 315 g~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~v 369 (379)
+..+ .|++|+. .++....+. .+. .+.+++|+|+++.|..++.++..++
T Consensus 255 ~~~~-gv~~~~~-~g~~~~~~~----~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 255 SSGT-GVCVFDS-DGQLLGHIP----TPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CCSS-EEEEECT-TSCEEEEEE----CSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred ecCC-cEEEECC-CCCEEEEEE----CCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 4444 4999997 455544442 122 4788999999998888887754443
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=4.9e-09 Score=93.47 Aligned_cols=230 Identities=16% Similarity=0.134 Sum_probs=140.1
Q ss_pred eEEEEECCCC-CEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCC
Q 016974 112 VMTCAFSPTG-QSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT 190 (379)
Q Consensus 112 v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 190 (379)
.-..+|+|++ .++.+...++.|..|+..... . ..+ .....+.++.+.|++ .+++ ++.+ .|.+||..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~-----~---~~~-~~~~~v~~i~~~~dg-~l~v-~~~~-gl~~~d~~~ 118 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR-----K---TVH-ALPFMGSALAKISDS-KQLI-ASDD-GLFLRDTAT 118 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE-----E---EEE-ECSSCEEEEEEEETT-EEEE-EETT-EEEEEETTT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc-----E---EEE-ECCCcceEEEEeCCC-eEEE-EECC-CEEEEECCC
Confidence 4566789975 455666678889999876421 1 111 123568889999875 4444 3444 499999887
Q ss_pred CeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC----CcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEE
Q 016974 191 GLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD----STARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFG 266 (379)
Q Consensus 191 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d----~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~ 266 (379)
+......... .......+..+.+++ +++++++...+ +...||.+. ... ...+..+....+.++|+|+|+.++
T Consensus 119 g~~~~~~~~~-~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~-~~~~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 119 GVLTLHAELE-SDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGK-VTKLFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp CCEEEEECSS-TTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTE-EEEEEEEESSEEEEEECTTSCEEE
T ss_pred CcEEEEeeCC-CCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCc-EEEeeCCCcccCCeEEcCCCCEEE
Confidence 7643332110 001123577888887 55666654321 234444443 222 223333445678999999998764
Q ss_pred -EeeCCCeEEEEECC--CC-ce--eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccC
Q 016974 267 -TGSDDGTCRLFDIR--TG-HQ--LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQN 340 (379)
Q Consensus 267 -s~s~D~~i~iwd~~--~~-~~--~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 340 (379)
+.+.++.|.+||+. ++ .. ...+.... ........++++++|.+.++...++.|.+||. .++....+ .
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~--~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i----~ 267 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDST--GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY----E 267 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECT--TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE----E
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECC--CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE----E
Confidence 44567899999985 45 21 11221111 11234678999999998777767789999997 45554444 2
Q ss_pred CccCceeEEEEC-CCCCeEEEeeCC
Q 016974 341 SHEGRITCLGLS-ADGSALCTGSWD 364 (379)
Q Consensus 341 ~h~~~v~~~~~s-~d~~~l~s~s~D 364 (379)
.+...+++++|+ ||++.|+.++..
T Consensus 268 ~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCCcEEEEEecCCCCEEEEEecC
Confidence 344568999998 898877554443
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.31 E-value=1.1e-09 Score=107.89 Aligned_cols=240 Identities=15% Similarity=0.132 Sum_probs=147.7
Q ss_pred cceEEEEECCCCCEEEE-----eeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC---
Q 016974 110 AWVMTCAFSPTGQSVAC-----GGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ--- 181 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~-----~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--- 181 (379)
..+..++|||||++||. |+.+..|++||+.+.. . ....+.+. ....++|+ ++. .|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~-----~-~~~~~~~~--k~~~~~Ws-Dg~-~l~y~~~~~~~~ 198 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ-----P-LETPLKDV--KFSGISWL-GNE-GFFYSSYDKPDG 198 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS-----E-EEEEEEEE--ESCCCEEE-TTT-EEEEEESSCCC-
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC-----C-CccccCCc--eeccEEEe-CCC-EEEEEEecCccc
Confidence 35777899999999884 3334679999997642 1 11111111 12456899 764 566655553
Q ss_pred ----------eEEEeecCCCee--EEEecCccccC-CccCeEEEEEeCCCCcEEEEec---CCCcEEEEEccCCccceEE
Q 016974 182 ----------TCVLWDITTGLR--TSVFGGEFQSG-HTADVLSVSISGSNSRMFVSGS---CDSTARLWDTRVASRAVRT 245 (379)
Q Consensus 182 ----------~i~~wd~~~~~~--~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~sg~---~d~~i~vwd~~~~~~~~~~ 245 (379)
.|.+|++.++.. ...+.. .. |.....++.+++....++++.+ .+..|.++|+.........
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~---~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGA---IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESC---SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEec---CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 499999877542 222221 12 3345678888875444444443 2358999998755434555
Q ss_pred EecccCCeeEEEEccCCCEEEEeeC-C---CeEEEEECCCCce--eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC
Q 016974 246 FHGHEGDVNTVKFFPDGNRFGTGSD-D---GTCRLFDIRTGHQ--LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG 319 (379)
Q Consensus 246 ~~~h~~~v~~v~~sp~g~~l~s~s~-D---~~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg 319 (379)
+..+....... ++++|..|+..++ | +.|..+|+.++.. ...+.. +.. .+. .|++++++|+....++
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~----~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-ERQ----QVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-CCS----SCE--EEEEETTEEEEEEEET
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-CCC----CEE--EEEEECCEEEEEEEEC
Confidence 66666666655 6677766654443 3 5799999987643 223322 211 233 8999999887776544
Q ss_pred ---cEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCC----CcEEEEecCc
Q 016974 320 ---DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD----TNLKIWAFGG 374 (379)
Q Consensus 320 ---~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D----~~i~vw~~~~ 374 (379)
.|++||...+. ...+. ..+.+.+..+.++++++.|+....+ ++|+.|++..
T Consensus 348 g~~~l~~~d~~g~~-~~~l~---~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 348 ATARVEQFDYEGKR-VREVA---LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp TEEEEEEECTTSCE-EEEEC---CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred CeeEEEEEECCCCe-eEEee---cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 68999976443 33321 1234567778888898877765555 7899988754
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=1.3e-08 Score=90.78 Aligned_cols=226 Identities=12% Similarity=0.048 Sum_probs=141.6
Q ss_pred EEEEEeeCCC-CeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 70 VYSLDWTSER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 70 v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
..+..|+|++ ..+++...++.|..||..+++.. .+.. ...+.+++++|+|+++++. .+ .+.+||..+.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~-----~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGV-----L 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC-----E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCc-----E
Confidence 4578899975 45667778899999998876533 3333 3568899999999887765 33 48888875421 1
Q ss_pred ceeeeec-cc-ccceEEEEEecCCCceEEEeeC------CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCc
Q 016974 149 PVSRMLS-GH-KGYVSCCQYVPDEDTHLITSSG------DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 149 ~~~~~~~-~h-~~~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 220 (379)
....... +. ...+..+.+.|++. ++++... .+.|..++ ++...... .+......+++++.+..
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~------~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKLF------ADISIPNSICFSPDGTT 192 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEEE------EEESSEEEEEECTTSCE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEee------CCCcccCCeEEcCCCCE
Confidence 1111111 11 23578889998764 4443322 24455555 44332221 11234567888875444
Q ss_pred EEEEecCCCcEEEEEcc--CC-c----cceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC
Q 016974 221 MFVSGSCDSTARLWDTR--VA-S----RAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG 293 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~--~~-~----~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 293 (379)
++++.+.++.|.+||+. .. . +....+......+..++++++|.++++...++.|.+||. +++.+..+...
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~-- 269 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP-- 269 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS--
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC--
Confidence 56666778899999975 22 1 112222223455788999999998887777789999998 56655544321
Q ss_pred CCCCCCeEEEEEc-cCCCEEEEEEecC
Q 016974 294 ENEIPHVTSIAFS-ISGRLLFAGYSNG 319 (379)
Q Consensus 294 ~~~~~~v~~~~fs-~~g~~l~sg~~dg 319 (379)
...+++++|+ ++++.|+.++..+
T Consensus 270 ---~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 270 ---GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ---CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ---CCCcEEEEEecCCCCEEEEEecCC
Confidence 2358999998 8988776665443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=3.1e-09 Score=93.79 Aligned_cols=237 Identities=12% Similarity=0.079 Sum_probs=147.7
Q ss_pred cccccccEEEEEeeCCCC-eEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCC
Q 016974 63 LQGHAGKVYSLDWTSERN-RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 63 l~gH~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 141 (379)
+..+........|+++++ +++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.+.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g- 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADG- 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCC-
Confidence 334444567899999998 6778888999999997 454 345555667788999999999888777778888887642
Q ss_pred CCCCCCcce-eeeeccc-ccceEEEEEecCCCceEEE----eeC-------------CCeEEEeecCCCeeEEEecCccc
Q 016974 142 TDKDGNLPV-SRMLSGH-KGYVSCCQYVPDEDTHLIT----SSG-------------DQTCVLWDITTGLRTSVFGGEFQ 202 (379)
Q Consensus 142 ~~~~~~~~~-~~~~~~h-~~~v~~~~~~~~~~~~l~s----~~~-------------d~~i~~wd~~~~~~~~~~~~~~~ 202 (379)
.... .....+. ...+..+.+.|++ .+.++ |.. .+.|..||..++......
T Consensus 117 -----~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----- 185 (305)
T 3dr2_A 117 -----QAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----- 185 (305)
T ss_dssp -----CEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-----
T ss_pred -----CEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-----
Confidence 1111 1111111 1235567888875 45554 332 356777787665433221
Q ss_pred cCCccCeEEEEEeCCCCcEEEEecC-----CCcEEEEEccCCcc-ceEEE-ecccCCeeEEEEccCCCEEEEeeCCCeEE
Q 016974 203 SGHTADVLSVSISGSNSRMFVSGSC-----DSTARLWDTRVASR-AVRTF-HGHEGDVNTVKFFPDGNRFGTGSDDGTCR 275 (379)
Q Consensus 203 ~~h~~~v~~~~~~~~~~~~l~sg~~-----d~~i~vwd~~~~~~-~~~~~-~~h~~~v~~v~~sp~g~~l~s~s~D~~i~ 275 (379)
.......+++++....++++.+. ++.|.+|++..... ....+ ....+....++++++|++.++. .+ .|.
T Consensus 186 --~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~ 261 (305)
T 3dr2_A 186 --DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVC 261 (305)
T ss_dssp --EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEE
T ss_pred --cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEE
Confidence 12235678888744334444443 27899999864320 01111 1123445678999999955544 44 499
Q ss_pred EEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEe
Q 016974 276 LFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWD 325 (379)
Q Consensus 276 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd 325 (379)
+||. +++.+..+.... .+..++|+++++.|+.++.++ ++.++
T Consensus 262 ~~~~-~g~~~~~~~~~~------~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 262 VFDS-DGQLLGHIPTPG------TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EECT-TSCEEEEEECSS------CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EECC-CCCEEEEEECCC------ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 9998 466655553221 367899999999888887654 44433
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.28 E-value=2.6e-10 Score=102.77 Aligned_cols=248 Identities=9% Similarity=0.007 Sum_probs=153.8
Q ss_pred EeeccccccccEEEEEeeCCCCeEEEEc----------CCCcEEEEECCCCceeeEeecCC-------cceEEEEECCCC
Q 016974 59 CCRTLQGHAGKVYSLDWTSERNRIVSAS----------QDGRLIVWNALTSQKTHAIKLPC-------AWVMTCAFSPTG 121 (379)
Q Consensus 59 ~~~~l~gH~~~v~~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~s~~g 121 (379)
...++..-..+ .+.++||+++++.+. .+++|.+||..+++...++..+. .....++|+|||
T Consensus 58 v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 58 TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135 (368)
T ss_dssp EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS
T ss_pred EEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC
Confidence 33444333345 699999999998886 47899999999999999987651 234578899999
Q ss_pred CEEEEeeC--CCcEEE--EEcCCCCCCCCCcceeeeec-ccccceEEEEEecCCCceEEEeeCCCeEEEeecCC----Ce
Q 016974 122 QSVACGGL--DSVCSI--FNLNSPTDKDGNLPVSRMLS-GHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITT----GL 192 (379)
Q Consensus 122 ~~l~~~~~--d~~i~i--w~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~----~~ 192 (379)
++++.+.. +..+.+ +|..+ ...+. +. . ....|++...+++.+.|+.+.+.|+.+ ..
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~t----------v~~i~v~~--~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASD----------DQLTKSAS--C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEE----------EEEEECSS--C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CEEEEEccCCCCeEEEEEEchhh----------ceEEECCC--c---eEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 99998875 456777 77642 11111 11 0 113355555667777888888888876 11
Q ss_pred eEEEec-CccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCc-cceEEEe-------cc---cCCeeEEEEcc
Q 016974 193 RTSVFG-GEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVAS-RAVRTFH-------GH---EGDVNTVKFFP 260 (379)
Q Consensus 193 ~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~-------~h---~~~v~~v~~sp 260 (379)
...... ..+..+ ..+. . .+.++.++.+. . +.+.+.|..... ..+..+. .+ ......++|+|
T Consensus 201 ~v~~~~t~~i~vg-~~P~---~-~~~~~~~~~vs-~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~ 273 (368)
T 1mda_H 201 IVGAQCTGAQNCS-SQAA---Q-ANYPGMLVWAV-A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK 273 (368)
T ss_dssp ECCCCSCTTSCBC-SCCE---E-ETTTTEEEECB-S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET
T ss_pred eEEEEeeeeeeCC-CCcc---c-cccCCEEEEEc-C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC
Confidence 111000 000011 1122 2 44444444443 4 889898875321 1111110 00 11122278999
Q ss_pred CCCEEEEeeC---------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCE-EEEEE-ecCcEEEEeCCCc
Q 016974 261 DGNRFGTGSD---------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRL-LFAGY-SNGDCYVWDTLLA 329 (379)
Q Consensus 261 ~g~~l~s~s~---------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~-l~sg~-~dg~i~iwd~~~~ 329 (379)
+++.+..+.. ++.+.++|+.+.+.+..+.... ....++|+|||++ +++.. .++.|.++|+.+.
T Consensus 274 dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE------EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC------CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 9988776532 2356699999998877654322 2578999999984 45555 4899999999999
Q ss_pred eEEEecc
Q 016974 330 KVVLNLG 336 (379)
Q Consensus 330 ~~~~~~~ 336 (379)
+.+..+.
T Consensus 348 kvv~~I~ 354 (368)
T 1mda_H 348 QDQSSVE 354 (368)
T ss_dssp EEEEECC
T ss_pred cEEEEEE
Confidence 9888774
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.24 E-value=9.5e-10 Score=99.12 Aligned_cols=252 Identities=9% Similarity=-0.075 Sum_probs=157.0
Q ss_pred cEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEee----------CCCcEEEEEcCCCCCCCCCcceeeeeccc--
Q 016974 90 RLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGG----------LDSVCSIFNLNSPTDKDGNLPVSRMLSGH-- 157 (379)
Q Consensus 90 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~h-- 157 (379)
+|.+.|..+++.+.++...... .++|+|+|++++.+. .++.+.+||+.+.. ....+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~-------vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL-------PIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC-------EEEEEEETTS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC-------EEEEEECCCc
Confidence 8889999999999999877665 799999999888876 36889999987532 22222211
Q ss_pred -----ccceEEEEEecCCCceEEEeeC--CCeEEE--eecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC
Q 016974 158 -----KGYVSCCQYVPDEDTHLITSSG--DQTCVL--WDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD 228 (379)
Q Consensus 158 -----~~~v~~~~~~~~~~~~l~s~~~--d~~i~~--wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 228 (379)
......+.++|++. +++.+.. +..+.+ +|..+ ...+. .+.. . .+.+.....+++.+.|
T Consensus 118 ~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~----v~~~---~--~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTK----SASC---F--HIHPGAAATHYLGSCP 184 (368)
T ss_dssp CSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE---EEEEE----CSSC---C--CCEEEETTEEECCCCT
T ss_pred cccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh---ceEEE----CCCc---e--EEccCCCeEEEEEcCC
Confidence 01234578999875 4555543 467888 99876 22221 1111 1 1122344566777788
Q ss_pred CcEEEEEccC----CccceE----EEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc--eeEEEeec------c
Q 016974 229 STARLWDTRV----ASRAVR----TFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH--QLQVYYQQ------H 292 (379)
Q Consensus 229 ~~i~vwd~~~----~~~~~~----~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~------~ 292 (379)
+.+.+.|+.. ..+... .+.-...+. . ++++..++..+. +.+.+.|+.+.. .+..+... .
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccc
Confidence 8888888764 111110 000111222 3 566666666666 899999986532 11111000 0
Q ss_pred CCCCCCCeEEEEEccCCCEEEEEEe-c--------CcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCe-EEEee
Q 016974 293 GENEIPHVTSIAFSISGRLLFAGYS-N--------GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSA-LCTGS 362 (379)
Q Consensus 293 ~~~~~~~v~~~~fs~~g~~l~sg~~-d--------g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~-l~s~s 362 (379)
+. .......++|+|+|+.++.+.. . +.+.++|..+.+.+..+.. . ....+++|+|||+. +++..
T Consensus 260 ~~-~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g-~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 260 NF-RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----G-HDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp TE-EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----E-EEECEEEECCSSSCEEEEEE
T ss_pred cc-ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----C-CCcceEEECCCCCEEEEEcc
Confidence 00 0001122689999998887643 2 3567999999888776531 1 14788999999984 55555
Q ss_pred -CCCcEEEEecCc
Q 016974 363 -WDTNLKIWAFGG 374 (379)
Q Consensus 363 -~D~~i~vw~~~~ 374 (379)
.+++|.++|...
T Consensus 334 ~~~~~VsVID~~t 346 (368)
T 1mda_H 334 AGTEVLDIYDAAS 346 (368)
T ss_dssp TTTTEEEEEESSS
T ss_pred CCCCeEEEEECCC
Confidence 499999999876
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=3.8e-10 Score=101.49 Aligned_cols=242 Identities=12% Similarity=0.070 Sum_probs=150.1
Q ss_pred cceEEEEECCCCCEEEEee--CCCcEEEEEcCCCCCCCCCcce-eeeecccccceEEEEEecCCCceEEEeeC-----CC
Q 016974 110 AWVMTCAFSPTGQSVACGG--LDSVCSIFNLNSPTDKDGNLPV-SRMLSGHKGYVSCCQYVPDEDTHLITSSG-----DQ 181 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----d~ 181 (379)
.....++++|+|+.+++.. .++.++||.++... ...++. .....+|...+..+++.+++ .++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~--~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG--LIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE--EEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC--eecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCC
Confidence 5678899999999988853 23436677765211 000000 01122455678899998874 44443332 57
Q ss_pred eEEEeecCCCeeEEEecCc-cccCCccCeEEEEEeCCCCcEEEEec---CCCcEEEEEccCCccceEEEecccCCee-EE
Q 016974 182 TCVLWDITTGLRTSVFGGE-FQSGHTADVLSVSISGSNSRMFVSGS---CDSTARLWDTRVASRAVRTFHGHEGDVN-TV 256 (379)
Q Consensus 182 ~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sg~---~d~~i~vwd~~~~~~~~~~~~~h~~~v~-~v 256 (379)
.|.+||+.++.....+... ....+......+++++.++.++++.. .++.|.+||.... +..+.+.+|..... ..
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g-~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG-LAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC-CEEEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC-CEEEEecCCCccccccc
Confidence 8999999988755444321 01122344678888875667777766 6889999998754 44555544432211 14
Q ss_pred EEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC-cEEEEeCCC---ceEE
Q 016974 257 KFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG-DCYVWDTLL---AKVV 332 (379)
Q Consensus 257 ~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg-~i~iwd~~~---~~~~ 332 (379)
.+.++|..+.+.+.|++++.|.. .+..++|+|+|++|+.+..++ .|+.++... +...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~-------------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHL-------------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCC-------------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCC
T ss_pred ceeECCEEEEeccCCCceeceec-------------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCC
Confidence 55667877777788888766531 256899999999999887766 565555311 0000
Q ss_pred -Ee-cccc-cCCccCceeEEEECCCCCeEEEeeCCCcEEEEec-Cc
Q 016974 333 -LN-LGSL-QNSHEGRITCLGLSADGSALCTGSWDTNLKIWAF-GG 374 (379)
Q Consensus 333 -~~-~~~~-~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~-~~ 374 (379)
.. ...+ ..++.+....++++++|.++++...++.|.+|+. ++
T Consensus 234 ~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 234 DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred hhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 00 0000 0122334567899999999999999999999998 54
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.18 E-value=1.1e-08 Score=100.25 Aligned_cols=278 Identities=13% Similarity=0.096 Sum_probs=167.7
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecCCcc----------e-EEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW----------V-MTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~----------v-~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
+..|+.++.++.|..+|..+|+.+..+...... + ..+++ .+..++.++.|+.+..+|..+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~----- 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGK----- 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC-----
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCC-----
Confidence 557778888999999999999998877654210 0 11222 46778888889999999886532
Q ss_pred cceeeeeccc-c----cceEEEEEecCCCceEEEeeC------CCeEEEeecCCCeeEEEecCcccc-------------
Q 016974 148 LPVSRMLSGH-K----GYVSCCQYVPDEDTHLITSSG------DQTCVLWDITTGLRTSVFGGEFQS------------- 203 (379)
Q Consensus 148 ~~~~~~~~~h-~----~~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~~~------------- 203 (379)
. +.. +..+ . ..+.+.-... ++ .++.++. ++.|..+|..+|...-.+...-..
T Consensus 150 ~-~W~-~~~~~~~~~~~~~~~~p~v~-~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g 225 (677)
T 1kb0_A 150 E-VWH-QNTFEGQKGSLTITGAPRVF-KG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRA 225 (677)
T ss_dssp E-EEE-EETTTTCCSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred E-Eee-ecCCcCcCcCcccccCcEEE-CC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccc
Confidence 1 111 1111 0 1111111111 23 3444432 799999999998765433211000
Q ss_pred --------------CCccCeEEEEEeCCCCcEEEEecCCC-------------------cEEEEEccCCccceEEEec--
Q 016974 204 --------------GHTADVLSVSISGSNSRMFVSGSCDS-------------------TARLWDTRVASRAVRTFHG-- 248 (379)
Q Consensus 204 --------------~h~~~v~~~~~~~~~~~~l~sg~~d~-------------------~i~vwd~~~~~~~~~~~~~-- 248 (379)
+.......+++++.. .+++.+..++ .|..+|..+. +.+-.++.
T Consensus 226 ~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG-~~~W~~~~~~ 303 (677)
T 1kb0_A 226 ARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG-KYKWHYQETP 303 (677)
T ss_dssp HTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC-CEEEEEESST
T ss_pred cccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCC-CEEEEEecCC
Confidence 000111245566544 4555555543 4888888765 33433332
Q ss_pred cc-------CCeeEEEEccCC---CEEEEeeCCCeEEEEECCCCceeEEEeeccCC------CCC---------------
Q 016974 249 HE-------GDVNTVKFFPDG---NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE------NEI--------------- 297 (379)
Q Consensus 249 h~-------~~v~~v~~sp~g---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~------~~~--------------- 297 (379)
|. ....-+....+| ..++.++.+|.+.++|..+|+.+..+...... ...
T Consensus 304 ~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~ 383 (677)
T 1kb0_A 304 GDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQ 383 (677)
T ss_dssp TCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCE
T ss_pred CcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCcc
Confidence 21 112223344577 68999999999999999999887554211000 000
Q ss_pred ---------CCeEEEEEccCCCEEEEEEec-------------------------------------------CcEEEEe
Q 016974 298 ---------PHVTSIAFSISGRLLFAGYSN-------------------------------------------GDCYVWD 325 (379)
Q Consensus 298 ---------~~v~~~~fs~~g~~l~sg~~d-------------------------------------------g~i~iwd 325 (379)
.....++|+|++.+++++..+ |.|+.||
T Consensus 384 ~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D 463 (677)
T 1kb0_A 384 DAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWD 463 (677)
T ss_dssp ECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEE
T ss_pred EECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEe
Confidence 011257899999988886542 7899999
Q ss_pred CCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 326 TLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..+++...... +..++....+..++..++.++.|+.+++||...
T Consensus 464 ~~tG~~~W~~~-----~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 464 PVAQKAAWSVE-----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp TTTTEEEEEEE-----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCCCcEEeecC-----CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 99998876652 223344445667888999999999999999754
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.14 E-value=2e-08 Score=98.54 Aligned_cols=266 Identities=14% Similarity=0.145 Sum_probs=154.3
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecC-C-cceEEEEECC---CCCEEEEee-----CCCcEEEEEcCCCCCCCCCc
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLP-C-AWVMTCAFSP---TGQSVACGG-----LDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~-~~v~~~~~s~---~g~~l~~~~-----~d~~i~iw~~~~~~~~~~~~ 148 (379)
+..|+.++.|+.|..+|..+|+.+...... . .....+..+| ++..++..+ .++.+..||..+...
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~----- 195 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE----- 195 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-----
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE-----
Confidence 457888999999999999999998777653 1 1111111122 444444322 367888888765321
Q ss_pred ceeeee-c----------------------------ccccceEEEEEecCCCceEEEeeCCCe-----------------
Q 016974 149 PVSRML-S----------------------------GHKGYVSCCQYVPDEDTHLITSSGDQT----------------- 182 (379)
Q Consensus 149 ~~~~~~-~----------------------------~h~~~v~~~~~~~~~~~~l~s~~~d~~----------------- 182 (379)
...... . ++......+.+.|+. ..++.++.++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceee
Confidence 000000 0 111111245677765 45777777653
Q ss_pred --EEEeecCCCeeEEEecCccc----cCCccCeEEEEEeCCCC---cEEEEecCCCcEEEEEccCCccceEEEe-cccC-
Q 016974 183 --CVLWDITTGLRTSVFGGEFQ----SGHTADVLSVSISGSNS---RMFVSGSCDSTARLWDTRVASRAVRTFH-GHEG- 251 (379)
Q Consensus 183 --i~~wd~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~---~~l~sg~~d~~i~vwd~~~~~~~~~~~~-~h~~- 251 (379)
|..||..+|...-.+..... .............. ++ .+++.++.+|.++++|..+.+ .+.... ....
T Consensus 275 ~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~-~l~~~~~~~~~w 352 (689)
T 1yiq_A 275 SSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGE-LLSAKGIVPQSW 352 (689)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCC-EEEEEESSCCSS
T ss_pred eeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCC-Eecccccccccc
Confidence 99999999876544421100 00111111112111 33 378889999999999987653 221110 0000
Q ss_pred -------------------------------------CeeEEEEccCCCEEEEeeC------------------------
Q 016974 252 -------------------------------------DVNTVKFFPDGNRFGTGSD------------------------ 270 (379)
Q Consensus 252 -------------------------------------~v~~v~~sp~g~~l~s~s~------------------------ 270 (379)
.-..++|+|+..++++...
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQL 432 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccccccc
Confidence 0113788998777776532
Q ss_pred ---------------------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCc
Q 016974 271 ---------------------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 271 ---------------------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~ 329 (379)
+|.|..||+.+++.+-.+... . ++..-.++..|.+++.|+.||.|+.||..++
T Consensus 433 g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~----~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 433 GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV--T----IFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES--S----SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC--C----CccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 478999999999876554321 1 1222356678889999999999999999999
Q ss_pred eEEEecccccCCccCceeEEEECCCCC-eEEEe
Q 016974 330 KVVLNLGSLQNSHEGRITCLGLSADGS-ALCTG 361 (379)
Q Consensus 330 ~~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~s~ 361 (379)
+.+..+..-......+ +.|..||+ ++++.
T Consensus 507 ~~lw~~~~~~~~~~~p---~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 507 EKLWEQPAASGVMAAP---VTYSVDGEQYVTFM 536 (689)
T ss_dssp CEEEEEECSSCCCSCC---EEEEETTEEEEEEE
T ss_pred ccceeeeCCCCcccCc---eEEEECCEEEEEEE
Confidence 9887653211122223 45667886 44443
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.12 E-value=2e-08 Score=98.53 Aligned_cols=282 Identities=12% Similarity=0.080 Sum_probs=165.7
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecCCcc---------eEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcc
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW---------VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLP 149 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~---------v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 149 (379)
+..|+.++.++.|..+|..+|+.+..+...... +..-.....+..++.++.|+.+..+|..+.. .
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~-----~- 143 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQ-----R- 143 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCC-----E-
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCC-----E-
Confidence 567888888999999999999998887643211 0000011135678888899999999886532 1
Q ss_pred eeeeecc-cc---cceEEEEEecCCCceEEEee-----CCCeEEEeecCCCeeEEEecCcc-cc----------------
Q 016974 150 VSRMLSG-HK---GYVSCCQYVPDEDTHLITSS-----GDQTCVLWDITTGLRTSVFGGEF-QS---------------- 203 (379)
Q Consensus 150 ~~~~~~~-h~---~~v~~~~~~~~~~~~l~s~~-----~d~~i~~wd~~~~~~~~~~~~~~-~~---------------- 203 (379)
+.+.... +. ..+.+.-...+ +..++..+ .++.|..||..+|...-.+...- ..
T Consensus 144 ~W~~~~~~~~~~~~~~~~sP~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 144 AWSVDTRADHKRSYTITGAPRVVN-GKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEEECCSCTTSCCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred eeeecCcCCCCCCccccCCcEEEC-CEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 1111111 10 01111001112 33333322 37899999999987654332100 00
Q ss_pred ---------CCccCeEEEEEeCCCCcEEEEecCCC-------------------cEEEEEccCCccceEEEec--cc---
Q 016974 204 ---------GHTADVLSVSISGSNSRMFVSGSCDS-------------------TARLWDTRVASRAVRTFHG--HE--- 250 (379)
Q Consensus 204 ---------~h~~~v~~~~~~~~~~~~l~sg~~d~-------------------~i~vwd~~~~~~~~~~~~~--h~--- 250 (379)
++......+.+++. ..+++.++.++ .|..||..+.+ .+-.++. |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~-~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE-YVWHYQTTPGDAWD 300 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCC-EEEEEESSTTCCSC
T ss_pred CCceeeecCCCCccccceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCc-eeEeeecCCccccc
Confidence 00011124566653 45666777665 38999988663 4444432 22
Q ss_pred ----CCeeEEEEccCCC---EEEEeeCCCeEEEEECCCCceeEEEeecc-----------------------CCCC----
Q 016974 251 ----GDVNTVKFFPDGN---RFGTGSDDGTCRLFDIRTGHQLQVYYQQH-----------------------GENE---- 296 (379)
Q Consensus 251 ----~~v~~v~~sp~g~---~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-----------------------~~~~---- 296 (379)
..+.-.....+|+ .++.++.+|.+.++|.++|+.+....... ....
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~ 380 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL 380 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeE
Confidence 1121222233665 78899999999999999998763321100 0000
Q ss_pred -------CCCeEEEEEccCCCEEEEEEe---------------------------------------------cCcEEEE
Q 016974 297 -------IPHVTSIAFSISGRLLFAGYS---------------------------------------------NGDCYVW 324 (379)
Q Consensus 297 -------~~~v~~~~fs~~g~~l~sg~~---------------------------------------------dg~i~iw 324 (379)
......++|+|+..+++++.. +|.|+.|
T Consensus 381 ~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~ 460 (689)
T 1yiq_A 381 VTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAW 460 (689)
T ss_dssp ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEE
T ss_pred eCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEE
Confidence 001234789999888887643 3779999
Q ss_pred eCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 325 DTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 325 d~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
|..+++....... ..++..-.++..+..|+.|+.|+.++.||...
T Consensus 461 D~~tG~~~W~~~~-----~~~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 461 DPVKQQAAWEVPY-----VTIFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp ETTTTEEEEEEEE-----SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ECCCCCeEeEccC-----CCCccCccceECCCEEEEECCCCcEEEEECCC
Confidence 9999988766521 12233334556788999999999999999654
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.09 E-value=1e-07 Score=93.44 Aligned_cols=261 Identities=10% Similarity=0.081 Sum_probs=155.6
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecC-C----cceEEEEECCCCCEEEEeeC------CCcEEEEEcCCCCCCCCC
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLP-C----AWVMTCAFSPTGQSVACGGL------DSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~----~~v~~~~~s~~g~~l~~~~~------d~~i~iw~~~~~~~~~~~ 147 (379)
+..|+.++.|+.|..+|..+|+.+..+... . ..+.+.-.- .+..++.++. ++.+..+|..+...
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~---- 202 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGER---- 202 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCE----
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcE----
Confidence 467888899999999999999998887764 1 111110000 1344444443 68899888765321
Q ss_pred cceeeeec------------------------------ccccceEEEEEecCCCceEEEeeCCC----------------
Q 016974 148 LPVSRMLS------------------------------GHKGYVSCCQYVPDEDTHLITSSGDQ---------------- 181 (379)
Q Consensus 148 ~~~~~~~~------------------------------~h~~~v~~~~~~~~~~~~l~s~~~d~---------------- 181 (379)
....... +.......+.+.|+.+ .++.++.++
T Consensus 203 -~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 203 -KWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp -EEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCT
T ss_pred -EEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCe
Confidence 0000000 1111112456777654 566555553
Q ss_pred ---eEEEeecCCCeeEEEecCccccCCc-------cCeEEEEEeCCCC---cEEEEecCCCcEEEEEccCCccceEEEec
Q 016974 182 ---TCVLWDITTGLRTSVFGGEFQSGHT-------ADVLSVSISGSNS---RMFVSGSCDSTARLWDTRVASRAVRTFHG 248 (379)
Q Consensus 182 ---~i~~wd~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~---~~l~sg~~d~~i~vwd~~~~~~~~~~~~~ 248 (379)
+|..+|..+|...-.+... .|. .....+.... ++ .+++.++.+|.|.++|..+.+ .+....-
T Consensus 281 ~~~sv~AlD~~TG~~~W~~~~~---~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~-~l~~~~~ 355 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHYQET---PGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGK-FISAKNF 355 (677)
T ss_dssp TTTEEEEECTTTCCEEEEEESS---TTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCC-EEEEEES
T ss_pred eeEEEEEEECCCCCEEEEEecC---CCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCC-Eeccccc
Confidence 5899999998765444211 111 1111122221 34 678899999999999987653 3332221
Q ss_pred cc-----------CCe------------------------eEEEEccCCCEEEEeeC-----------------------
Q 016974 249 HE-----------GDV------------------------NTVKFFPDGNRFGTGSD----------------------- 270 (379)
Q Consensus 249 h~-----------~~v------------------------~~v~~sp~g~~l~s~s~----------------------- 270 (379)
.. .++ ..++|+|++.++++...
T Consensus 356 ~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~ 435 (677)
T 1kb0_A 356 VPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQ 435 (677)
T ss_dssp SCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTT
T ss_pred cccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccc
Confidence 00 001 15788998888877543
Q ss_pred --------------------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCce
Q 016974 271 --------------------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAK 330 (379)
Q Consensus 271 --------------------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~ 330 (379)
.+.|..||+.+++.+-.+... . ++....++.+|..++.|+.||.+++||..+++
T Consensus 436 ~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~----~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 436 SGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV--S----PWNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp GGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES--S----SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC--C----CCcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 278999999999876554321 1 23344567788899999999999999999999
Q ss_pred EEEecccccCCccCceeEEEECCCCCeEEE
Q 016974 331 VVLNLGSLQNSHEGRITCLGLSADGSALCT 360 (379)
Q Consensus 331 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s 360 (379)
.+..+..- +...-.-+.|.++|+.+++
T Consensus 510 ~lw~~~~~---~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 510 KLWEAPTG---TGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEEEEECS---SCCCSCCEEEEETTEEEEE
T ss_pred eeeeeeCC---CCcccCCEEEEeCCEEEEE
Confidence 88766322 2111223446678864443
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=104.92 Aligned_cols=225 Identities=13% Similarity=0.056 Sum_probs=119.7
Q ss_pred CCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeeccc
Q 016974 78 ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGH 157 (379)
Q Consensus 78 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h 157 (379)
+++.|++++.|+.|+.||..+|+....+.. ..+.+..+.+++..+++++.|+.+..||..+.... .....+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~-------w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL-------TKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCS-------EECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee-------eeeecc
Confidence 577899999999999999999999988876 44555556677888888899999999998643210 011111
Q ss_pred cc-ceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEc
Q 016974 158 KG-YVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDT 236 (379)
Q Consensus 158 ~~-~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~ 236 (379)
.. .+.+.-.... +..+++++.|+.+..||..+|...-.+. .+. ...+.| .+..+++++.|+.|+.||.
T Consensus 79 ~~~~~~~sp~~~~-~~~v~~g~~dg~v~a~D~~tG~~~w~~~-----~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 79 IPELVQASPCRSS-DGILYMGKKQDIWYVIDLLTGEKQQTLS-----SAF----ADSLSP-STSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEECCCS
T ss_pred CccccccCceEec-CCEEEEEeCCCEEEEEECCCCcEEEEec-----CCC----cccccc-cCCEEEEEecCCEEEEEEC
Confidence 10 1100000012 2457788899999999999887543331 111 122333 4567788889999999998
Q ss_pred cCCccceEEEecccCCeeEEEEccCC---CEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEE
Q 016974 237 RVASRAVRTFHGHEGDVNTVKFFPDG---NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLF 313 (379)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~sp~g---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~ 313 (379)
++... +..+..+. .....+.++. ..+++++.|+.+..||.++++.+-.+.. . ...+....++++|...+
T Consensus 148 ~tG~~-~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~---~pv~~~~~~~~dg~~~v 219 (369)
T 2hz6_A 148 KTREL-RWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY--A---SPVVAFYVWQREGLRKV 219 (369)
T ss_dssp SSSSC-CCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC--S---SCEEEEEECTTSSCEEE
T ss_pred CCCCE-EEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC--C---CceEEEEEecCCceEec
Confidence 76533 22222111 1222333332 4577788999999999999987644321 1 11233445566665321
Q ss_pred E--EEecCcEEEEeCCCce
Q 016974 314 A--GYSNGDCYVWDTLLAK 330 (379)
Q Consensus 314 s--g~~dg~i~iwd~~~~~ 330 (379)
. ...++.++.+|..+++
T Consensus 220 ~~~~~~~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 220 MHINVAVETLRYLTFMSGE 238 (369)
T ss_dssp CCEEEEHHHHHHHHHHHHH
T ss_pred cceeecccceeeeehhcCC
Confidence 1 1124456666655444
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.05 E-value=4.9e-07 Score=81.95 Aligned_cols=264 Identities=13% Similarity=0.007 Sum_probs=152.0
Q ss_pred CCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeeccc
Q 016974 78 ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGH 157 (379)
Q Consensus 78 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h 157 (379)
++..++.++.|+.|..+|..+++................. .+..++.++.++.+..+|..+.. ..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~-----~~W~~~~~~~ 174 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGA-----VKWTVNLDMP 174 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCC-----EEEEEECCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCc-----EEEEEeCCCC
Confidence 3557788889999999999999988777654321111111 24577778889989999876432 1111111000
Q ss_pred cc---ceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCc--cC---e-EEEEEeCCCCcEEEEecCC
Q 016974 158 KG---YVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHT--AD---V-LSVSISGSNSRMFVSGSCD 228 (379)
Q Consensus 158 ~~---~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~--~~---v-~~~~~~~~~~~~l~sg~~d 228 (379)
.. ........ + ..++.++.++.+..+|..++...-........+.. .. + ...... + ..+..++.+
T Consensus 175 ~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~-~~v~~~~~~ 248 (376)
T 3q7m_A 175 SLSLRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--N-GVVFALAYN 248 (376)
T ss_dssp ----CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--T-TEEEEECTT
T ss_pred ceeecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--C-CEEEEEecC
Confidence 00 00011111 2 35777888999999999888654433211000000 00 0 000111 2 355667788
Q ss_pred CcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccC
Q 016974 229 STARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSIS 308 (379)
Q Consensus 229 ~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~ 308 (379)
+.+..+|..+.. .+.... ......+.. ++..+..++.++.+..+|..+++.+-........ .+..... .
T Consensus 249 g~l~~~d~~tG~-~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~----~~~~~~~--~ 317 (376)
T 3q7m_A 249 GNLTALDLRSGQ-IMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR----LLTSPVL--Y 317 (376)
T ss_dssp SCEEEEETTTCC-EEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS----CCCCCEE--E
T ss_pred cEEEEEECCCCc-EEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC----cccCCEE--E
Confidence 999999987653 332222 223334433 4667888888999999999999875443211111 1112222 3
Q ss_pred CCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeE-EEECCCCCeEEEeeCCCcEEEEe
Q 016974 309 GRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITC-LGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 309 g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~-~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
+..|+.++.+|.|+++|..+++....... ....+.. ... .+..|+.++.||.|+.|+
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~~~----~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVAQQKV----DSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC----CTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec----CCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 56888899999999999988887654421 1112211 111 245677899999999886
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.04 E-value=8.1e-07 Score=80.53 Aligned_cols=269 Identities=12% Similarity=0.067 Sum_probs=155.6
Q ss_pred CCCeEEEEcCCCcEEEEECCCCceeeEeecCCc--------ceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcc
Q 016974 78 ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCA--------WVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLP 149 (379)
Q Consensus 78 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--------~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 149 (379)
.+..|+.++.++.|..+|..+++.+........ .........++..+..++.++.+..+|..+.. ..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~-----~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGT-----VA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCC-----EE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCC-----EE
Confidence 356788889999999999999998877665321 11122222346677888889999999876432 11
Q ss_pred eeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCC
Q 016974 150 VSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDS 229 (379)
Q Consensus 150 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 229 (379)
......+. ....... . +..++.++.++.+..+|..++...-.................... + ..++.+..++
T Consensus 127 W~~~~~~~--~~~~p~~-~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g 198 (376)
T 3q7m_A 127 WQTKVAGE--ALSRPVV-S--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNG 198 (376)
T ss_dssp EEEECSSC--CCSCCEE-E--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTT
T ss_pred EEEeCCCc--eEcCCEE-E--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCC
Confidence 11111111 0001111 1 236778888999999999988654433211000000000111112 2 3566788899
Q ss_pred cEEEEEccCCccceEEEecccC-------CeeEEEEcc--CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCe
Q 016974 230 TARLWDTRVASRAVRTFHGHEG-------DVNTVKFFP--DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 230 ~i~vwd~~~~~~~~~~~~~h~~-------~v~~v~~sp--~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v 300 (379)
.|..+|..+.. .......... .+..+...| .+..+..++.++.+..+|.++++.+-... . ...
T Consensus 199 ~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~--~-----~~~ 270 (376)
T 3q7m_A 199 RVSAVLMEQGQ-MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE--L-----GSV 270 (376)
T ss_dssp EEEEEETTTCC-EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC--C-----CCE
T ss_pred EEEEEECCCCc-EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc--C-----CCC
Confidence 99999987653 3322221100 000011111 24567778889999999999998764332 1 123
Q ss_pred EEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 301 TSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 301 ~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..+.. ++..|+.++.++.|+.+|..+++........ ....+..... .+..|+.++.+|.|.+++...
T Consensus 271 ~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 271 NDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDL---LHRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTT---TTSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred CCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeeccc---CCCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 33333 4678888889999999999888876554211 1111222222 246788888999999998654
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=1.7e-10 Score=104.73 Aligned_cols=204 Identities=9% Similarity=-0.001 Sum_probs=106.0
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecC
Q 016974 120 TGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 199 (379)
Q Consensus 120 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 199 (379)
++..+++++.|+.+..||..+.. . ...+.. +.+.+..+..+ +..+++++.|+.|..||..++........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~-----~--~W~~~~--~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS-----I--KWTLKE--DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC-----E--EEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCC-----E--EEEecC--CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 57889999999999999986532 1 112222 23333334443 35677888999999999988764333211
Q ss_pred ccc-cCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEE
Q 016974 200 EFQ-SGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFD 278 (379)
Q Consensus 200 ~~~-~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd 278 (379)
... ......+. . .+..+++|+.|+.|..||..+. +.+..+..+. ...++|++..+++++.|+.|..||
T Consensus 78 ~~~~~~~~sp~~----~--~~~~v~~g~~dg~v~a~D~~tG-~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d 146 (369)
T 2hz6_A 78 TIPELVQASPCR----S--SDGILYMGKKQDIWYVIDLLTG-EKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYD 146 (369)
T ss_dssp CHHHHHTTCSCC-----------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCC
T ss_pred cCccccccCceE----e--cCCEEEEEeCCCEEEEEECCCC-cEEEEecCCC----cccccccCCEEEEEecCCEEEEEE
Confidence 100 00011111 0 2235677888999999998865 3344444332 245677888999999999999999
Q ss_pred CCCCceeEEEeeccCCCCCCCeEEEEEccCC---CEEEEEEecCcEEEEeCCCceEEEecccccCCccCcee-EEEECCC
Q 016974 279 IRTGHQLQVYYQQHGENEIPHVTSIAFSISG---RLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRIT-CLGLSAD 354 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~-~~~~s~d 354 (379)
.++++.+-.+.... ....++++++ ..+++++.||.|+.||..+++...... ...++. ...++++
T Consensus 147 ~~tG~~~W~~~~~~-------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-----~~~pv~~~~~~~~d 214 (369)
T 2hz6_A 147 TKTRELRWNATYFD-------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-----YASPVVAFYVWQRE 214 (369)
T ss_dssp SSSSSCCCEEEEEE-------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-----CSSCEEEEEECTTS
T ss_pred CCCCCEEEeEeccc-------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-----CCCceEEEEEecCC
Confidence 99987654332110 1122333332 457778899999999998888766542 223443 3445556
Q ss_pred CC
Q 016974 355 GS 356 (379)
Q Consensus 355 ~~ 356 (379)
|.
T Consensus 215 g~ 216 (369)
T 2hz6_A 215 GL 216 (369)
T ss_dssp SC
T ss_pred ce
Confidence 64
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.01 E-value=8.8e-07 Score=80.60 Aligned_cols=237 Identities=14% Similarity=0.117 Sum_probs=139.1
Q ss_pred EEC--CCCCEEEE-eeCCCcEEEEEcCCCCCCCCCcceeeeec--------ccccceEEEEEecCCCceEEEeeCC----
Q 016974 116 AFS--PTGQSVAC-GGLDSVCSIFNLNSPTDKDGNLPVSRMLS--------GHKGYVSCCQYVPDEDTHLITSSGD---- 180 (379)
Q Consensus 116 ~~s--~~g~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~s~~~d---- 180 (379)
.++ +++++|+. +..++.|.++|+.+... ...+.+++. +. ..-..+...|++ .++++..+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~---~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~pdG--i~Vs~~g~~~g~ 161 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPR---EPKIIKVIEPEEVKKVSGY-SRLHTVHCGPDA--IYISALGNEEGE 161 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTT---SCEEEEEECHHHHHHHHCE-EEEEEEEECSSC--EEEEEEEETTSC
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCC---CceeeeeechhhcccccCC-CcccceeECCCe--EEEEcCCCcCCC
Confidence 346 77887655 55678899999863211 112223331 11 122345666765 66666555
Q ss_pred --CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEec-------------------CCCcEEEEEccCC
Q 016974 181 --QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS-------------------CDSTARLWDTRVA 239 (379)
Q Consensus 181 --~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-------------------~d~~i~vwd~~~~ 239 (379)
+.|.+.|..+......+... .....--..+.++| +.+.+++.. .+.+|.+||+...
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~--~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEID--RGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSB--CTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCCeEEEEECCCCeEEEEEccC--CCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 78999999988766655321 11112234466776 555777664 3689999999854
Q ss_pred ccceEEEecc--cCCeeEEEE--ccCCCEEEEee------CCCeEEEEECCCCce--eEEEeecc--CCCC---------
Q 016974 240 SRAVRTFHGH--EGDVNTVKF--FPDGNRFGTGS------DDGTCRLFDIRTGHQ--LQVYYQQH--GENE--------- 296 (379)
Q Consensus 240 ~~~~~~~~~h--~~~v~~v~~--sp~g~~l~s~s------~D~~i~iwd~~~~~~--~~~~~~~~--~~~~--------- 296 (379)
+.+.++.-- ......+.| +|+++++..++ .+++|.+|....+.- .+.+.... ....
T Consensus 239 -k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 239 -KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp -EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred -cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 555555431 123445656 99999887776 466888776554321 11110000 0000
Q ss_pred --CCCeEEEEEccCCCEEEEEE-ecCcEEEEeCCC---ceEEEecccc--c--CCc---c---CceeEEEECCCCCeEEE
Q 016974 297 --IPHVTSIAFSISGRLLFAGY-SNGDCYVWDTLL---AKVVLNLGSL--Q--NSH---E---GRITCLGLSADGSALCT 360 (379)
Q Consensus 297 --~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~~~---~~~~~~~~~~--~--~~h---~---~~v~~~~~s~d~~~l~s 360 (379)
......+.+||||++|.++. ..+.|.+||+.. .+.+..+..- . ..| . +.-..++++|||++|++
T Consensus 318 ~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 318 AVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp EECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 12367899999999998876 467999999752 2333332110 0 001 0 12367899999999998
Q ss_pred ee
Q 016974 361 GS 362 (379)
Q Consensus 361 ~s 362 (379)
+.
T Consensus 398 aN 399 (462)
T 2ece_A 398 TN 399 (462)
T ss_dssp EC
T ss_pred Ec
Confidence 87
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.01 E-value=2.8e-06 Score=73.01 Aligned_cols=250 Identities=9% Similarity=0.052 Sum_probs=147.7
Q ss_pred eEEEEcCCCcEEEEECCCCcee-----eEeecCCcceEEEEECCCCCEEEE-eeCCCcEEEEEcCCCCCCCCCcceeeee
Q 016974 81 RIVSASQDGRLIVWNALTSQKT-----HAIKLPCAWVMTCAFSPTGQSVAC-GGLDSVCSIFNLNSPTDKDGNLPVSRML 154 (379)
Q Consensus 81 ~l~s~s~D~~v~iwd~~~~~~~-----~~~~~~~~~v~~~~~s~~g~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 154 (379)
+|+.+.. +.|+.+++...... ..+..+......++|++++..|.. -..++.|..++++... .....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-------~~~~~ 74 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-------PTTII 74 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-------CEEEE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-------cEEEE
Confidence 3444333 46777777543321 112222234678899997665554 4456788899876421 11112
Q ss_pred cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecC--CCcEE
Q 016974 155 SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSC--DSTAR 232 (379)
Q Consensus 155 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~--d~~i~ 232 (379)
.........+++.++++..+++-...+.|.++++.......... ........+++++.++.++++... .+.|.
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-----~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-----TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----SSCSSEEEEEEETTTTEEEEEECCSSSCEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-----CCCCCccEEEEeeCCCEEEEEECCCCCcEEE
Confidence 22223467788988766666666778899999986543222221 112345788888766766666544 46788
Q ss_pred EEEccCCccceEEEe-cccCCeeEEEEccCCCEE-EEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCC
Q 016974 233 LWDTRVASRAVRTFH-GHEGDVNTVKFFPDGNRF-GTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGR 310 (379)
Q Consensus 233 vwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~ 310 (379)
.++.... ....+. ........++++|++..| ++-...+.|.++|+..... ..+... ......+++. +.
T Consensus 150 ~~~~dg~--~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~-----~~~P~gi~~d--~~ 219 (267)
T 1npe_A 150 TSHMDGT--NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLEG-----LQYPFAVTSY--GK 219 (267)
T ss_dssp EEETTSC--CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEEC-----CCSEEEEEEE--TT
T ss_pred EEecCCC--CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEecC-----CCCceEEEEe--CC
Confidence 8876532 222222 223457899999987655 4555678999999875332 222221 1224566654 45
Q ss_pred EEEEEE-ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCC
Q 016974 311 LLFAGY-SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGS 356 (379)
Q Consensus 311 ~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~ 356 (379)
.|+.+. ..+.|.++|..+++....+.. +.......+++.|++.
T Consensus 220 ~lyva~~~~~~v~~~d~~~g~~~~~i~~---g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 220 NLYYTDWKTNSVIAMDLAISKEMDTFHP---HKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECC---SSCCCCCCEEEECSCC
T ss_pred EEEEEECCCCeEEEEeCCCCCceEEEcc---ccccccceeeecCccC
Confidence 555554 567999999988887766531 1112356788888875
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.94 E-value=7.9e-08 Score=85.28 Aligned_cols=267 Identities=12% Similarity=0.047 Sum_probs=151.9
Q ss_pred ccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCC
Q 016974 66 HAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 66 H~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~ 145 (379)
+...+.++...+++. |..++.+ +..+|. +++....+...........+. +..+..++.++.+..+|.. .
T Consensus 58 ~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g---- 126 (330)
T 3hxj_A 58 GEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-G---- 126 (330)
T ss_dssp GGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-S----
T ss_pred CCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-C----
Confidence 334456666666664 4445544 888886 565544433322212222222 5566677778888888764 1
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
.. ......+...+.++...++ ..+..++.++.+..+|.. +.....+. .....+.++.... ++.+++.
T Consensus 127 -~~--~~~~~~~~~~~~~~~~~~~--g~l~vgt~~~~l~~~d~~-g~~~~~~~-----~~~~~~~~~~~d~-~g~l~v~- 193 (330)
T 3hxj_A 127 -TE--KWRFKTKKAIYATPIVSED--GTIYVGSNDNYLYAINPD-GTEKWRFK-----TNDAITSAASIGK-DGTIYFG- 193 (330)
T ss_dssp -CE--EEEEECSSCCCSCCEECTT--SCEEEECTTSEEEEECTT-SCEEEEEE-----CSSCCCSCCEECT-TCCEEEE-
T ss_pred -CE--EEEEcCCCceeeeeEEcCC--CEEEEEcCCCEEEEECCC-CCEeEEEe-----cCCCceeeeEEcC-CCEEEEE-
Confidence 11 1111222223333344333 347778888999999988 55433332 1122344444443 4555544
Q ss_pred cCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEE
Q 016974 226 SCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAF 305 (379)
Q Consensus 226 ~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~f 305 (379)
+ +.|..+| ... ............+.++...++|. |..++.++.+..+|. +++.+..+.... ..+..+.+
T Consensus 194 t--~~l~~~d-~~g-~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~-----~~~~~~~~ 262 (330)
T 3hxj_A 194 S--DKVYAIN-PDG-TEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGK-----RIESSPVI 262 (330)
T ss_dssp S--SSEEEEC-TTS-CEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSS-----CCCSCCEE
T ss_pred e--CEEEEEC-CCC-cEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCC-----CccccceE
Confidence 4 7888998 433 33444444445688888888876 445667778888884 555554433211 11233455
Q ss_pred ccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 306 SISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 306 s~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.++| .|..|+.+|.|+.+|. +++...... .....+.++...++|++. .++.+|.+++.....
T Consensus 263 ~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~----~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 263 GNTD-TIYFGSYDGHLYAINP-DGTEKWNFE----TGSWIIATPVIDENGTIY-FGTRNGKFYALFNLE 324 (330)
T ss_dssp CTTS-CEEEECTTCEEEEECT-TSCEEEEEE----CSSCCCSCCEECTTCCEE-EECTTSCEEEEEC--
T ss_pred cCCC-eEEEecCCCCEEEECC-CCcEEEEEE----cCCccccceEEcCCCEEE-EEcCCCeEEEEeccc
Confidence 6566 4666888889999996 555544432 123456677777787754 588999999987655
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.91 E-value=8e-08 Score=85.26 Aligned_cols=260 Identities=15% Similarity=0.090 Sum_probs=151.5
Q ss_pred EEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceee
Q 016974 73 LDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSR 152 (379)
Q Consensus 73 ~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 152 (379)
.....++ .|..++.++.|..|| .+++.......+...+.++...++|.+.+ ++.+ +..+|.+. +...
T Consensus 25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~~g------~~~~-- 91 (330)
T 3hxj_A 25 PILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYF-GSDK--VYAINPDG------TEKW-- 91 (330)
T ss_dssp CEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECC-SSCE--EEEECCCG------GGGG--
T ss_pred ceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEE-ecCc--EEEECCCC------cEEE--
Confidence 3343444 566778899999999 88887766655555556677777776544 4444 66666421 1100
Q ss_pred eecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEE
Q 016974 153 MLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTAR 232 (379)
Q Consensus 153 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 232 (379)
............... +..+..++.++.+..+|.. +....... .+...+.++...+ ++. +..++.++.|.
T Consensus 92 ~~~~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~-----~~~~~~~~~~~~~-~g~-l~vgt~~~~l~ 160 (330)
T 3hxj_A 92 RFDTKKAIVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFK-----TKKAIYATPIVSE-DGT-IYVGSNDNYLY 160 (330)
T ss_dssp GSCC-----CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEE-----CSSCCCSCCEECT-TSC-EEEECTTSEEE
T ss_pred EEECCCCcccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEc-----CCCceeeeeEEcC-CCE-EEEEcCCCEEE
Confidence 011111111112222 2357778889999999987 54433321 1122233334442 444 44577788999
Q ss_pred EEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEE
Q 016974 233 LWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLL 312 (379)
Q Consensus 233 vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l 312 (379)
.+|.. . .....+......+.++.+.++|..++.. +.+..+| .+++.+..+.. ....+.++.++++|. |
T Consensus 161 ~~d~~-g-~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~-----~~~~~~~~~~~~~g~-l 228 (330)
T 3hxj_A 161 AINPD-G-TEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA-----GYWTVTRPAISEDGT-I 228 (330)
T ss_dssp EECTT-S-CEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC-----SSCCCSCCEECTTSC-E
T ss_pred EECCC-C-CEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc-----CCcceeceEECCCCe-E
Confidence 99976 3 4444444445567778887888766544 7889999 66665543321 113466778888875 4
Q ss_pred EEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 313 FAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 313 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..++.++.|..+|. +++...... .....+..+.+.+++. |..++.++.|..++..+
T Consensus 229 ~v~t~~~gl~~~~~-~g~~~~~~~----~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~~g 284 (330)
T 3hxj_A 229 YVTSLDGHLYAINP-DGTEKWRFK----TGKRIESSPVIGNTDT-IYFGSYDGHLYAINPDG 284 (330)
T ss_dssp EEEETTTEEEEECT-TSCEEEEEE----CSSCCCSCCEECTTSC-EEEECTTCEEEEECTTS
T ss_pred EEEcCCCeEEEECC-CCCEeEEee----CCCCccccceEcCCCe-EEEecCCCCEEEECCCC
Confidence 55677888999985 444443331 1122233455555665 55577788888887643
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.87 E-value=1.3e-06 Score=74.59 Aligned_cols=204 Identities=8% Similarity=0.045 Sum_probs=132.0
Q ss_pred ceEEEEEecCCCceEEEeeC--CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEcc
Q 016974 160 YVSCCQYVPDEDTHLITSSG--DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTR 237 (379)
Q Consensus 160 ~v~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~ 237 (379)
....+.|+++ +.++++.+. ++.|.+.|+.++.....+.. +.......+++. +..++++.-.++.+.++|..
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l----~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKM----DDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEEC----CTTCCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEec----CCCcceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 3567889886 344444433 68999999999877665431 111122345554 34677777788999999987
Q ss_pred CCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEe
Q 016974 238 VASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYS 317 (379)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~ 317 (379)
+. +.+..+..-.. ....+++||+.++.+..++.|.++|..+.+.+..+...........++.+.|. +|+..+....
T Consensus 95 t~-~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 95 TL-SNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp TT-EEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CC-cEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC
Confidence 55 45555542111 22446678887776667889999999998877665432221122346778888 7754444446
Q ss_pred cCcEEEEeCCCceEEEecccc--c-----CCc--cCceeEEEECCCCCe-EEEeeCCCcEEEEecCc
Q 016974 318 NGDCYVWDTLLAKVVLNLGSL--Q-----NSH--EGRITCLGLSADGSA-LCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 318 dg~i~iwd~~~~~~~~~~~~~--~-----~~h--~~~v~~~~~s~d~~~-l~s~s~D~~i~vw~~~~ 374 (379)
++.|.+-|..+++.+..+... . ..+ ....+.++|+|+++. ++++...++|.+-++..
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 789999999999877665321 0 001 124589999999864 45566678888777644
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.83 E-value=2.3e-05 Score=67.24 Aligned_cols=223 Identities=8% Similarity=0.016 Sum_probs=134.2
Q ss_pred cEEEEEeeCCCCeE-EEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEE-EEeeCCCcEEEEEcCCCCCCCC
Q 016974 69 KVYSLDWTSERNRI-VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 69 ~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
.+.+++|+++++.| ++-..++.|..++...+.....+.........++++|++..| ++-...+.|.+++++....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~--- 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR--- 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE---
Confidence 46789999976554 555667899999987554433333333467889999976554 4445567888888764211
Q ss_pred CcceeeeecccccceEEEEEecCCCceEEEeeC--CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE
Q 016974 147 NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG--DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS 224 (379)
Q Consensus 147 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 224 (379)
.............+++.|+++..+++... .+.|..+++......... .........+++++.++.++++
T Consensus 114 ----~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~-----~~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 114 ----RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA-----QDNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp ----EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE-----CTTCSCEEEEEEETTTTEEEEE
T ss_pred ----EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEE-----ECCCCCCcEEEEcCCCCEEEEE
Confidence 01111111345678898865554444433 467877777543222111 1122346778888766777788
Q ss_pred ecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEE
Q 016974 225 GSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIA 304 (379)
Q Consensus 225 g~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 304 (379)
....+.|.++|.... .....+.+ ......++.. .+..+++....+.|..+|..+++.+..+.... ......++
T Consensus 185 d~~~~~I~~~~~~g~-~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~----~~~p~gi~ 257 (267)
T 1npe_A 185 DAGTHRAECLNPAQP-GRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK----QTRLYGIT 257 (267)
T ss_dssp ETTTTEEEEEETTEE-EEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSS----CCCCCCEE
T ss_pred ECCCCEEEEEecCCC-ceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcccc----ccccceee
Confidence 888889999998632 22222222 2334566654 34444554567899999998888776653211 11245677
Q ss_pred EccCCC
Q 016974 305 FSISGR 310 (379)
Q Consensus 305 fs~~g~ 310 (379)
+.|++-
T Consensus 258 ~~~~~~ 263 (267)
T 1npe_A 258 IALSQC 263 (267)
T ss_dssp EECSCC
T ss_pred ecCccC
Confidence 777763
No 239
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=2e-06 Score=72.58 Aligned_cols=192 Identities=12% Similarity=0.113 Sum_probs=124.1
Q ss_pred cceEEEEEecCCCceEEEeeCCC--eEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEc
Q 016974 159 GYVSCCQYVPDEDTHLITSSGDQ--TCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDT 236 (379)
Q Consensus 159 ~~v~~~~~~~~~~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~ 236 (379)
.....+.|+ + +.++.+.+.+| .|+.+|+.++.....+.. ....-...+++. +.+++...-.++.+.++|.
T Consensus 43 ~ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l----~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 43 AFTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIEL----GKRYFGEGISDW--KDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp CEEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEEC----CTTCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred cccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEec----CCccceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence 345677887 3 45667777765 899999999977665532 111111234444 4567777777899999998
Q ss_pred cCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE
Q 016974 237 RVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
.+. +.+.++.. .. ....+++|++.|+....++.|.++|..+.+.+..+...........++.+.|. +|+..+...
T Consensus 115 ~t~-~~~~ti~~-~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 115 RNL-RQVRSFNY-DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp TTC-CEEEEEEC-SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred ccC-cEEEEEEC-CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 765 45666653 22 22334467777776666788999999998877665442211122345667776 776555455
Q ss_pred ecCcEEEEeCCCceEEEeccc--ccC------CccCceeEEEECCCCCeEEEeeC
Q 016974 317 SNGDCYVWDTLLAKVVLNLGS--LQN------SHEGRITCLGLSADGSALCTGSW 363 (379)
Q Consensus 317 ~dg~i~iwd~~~~~~~~~~~~--~~~------~h~~~v~~~~~s~d~~~l~s~s~ 363 (379)
.+..|.+.|..+++....+.. +.. .-..-.+.|||+|+++.|...+.
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 678999999999988766532 111 11234689999999887776654
No 240
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.80 E-value=6.7e-05 Score=74.99 Aligned_cols=286 Identities=11% Similarity=0.050 Sum_probs=168.9
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEe-ecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAI-KLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
|.++...+++.+.+ |+.++.+..||..+++..... ......|.++...++|.+.+....+| +..|+..... .
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~G-l~~~~~~~~~-----~ 247 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAG-LFLINPKTKE-----I 247 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSC-EEEEETTTTE-----E
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCC-eEEEeCCCCe-----E
Confidence 77887777776554 566556899998766543321 12235678888788887666543444 7777765321 0
Q ss_pred ceeeee-----cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCc--cccCCccCeEEEEEeCCCCcE
Q 016974 149 PVSRML-----SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE--FQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 149 ~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~ 221 (379)
...... .-....|.++...+++ .|..|+.+ -|.+||..++......... ...-....|.++.... ++.+
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~l 323 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQN--RLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGGM 323 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTS--CEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSCE
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCC--CEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcCE
Confidence 000000 0013468887766544 35555555 6888998776543322111 0112335688887775 4555
Q ss_pred EEEecCCCcEEEEEccCCccceEEEec-------ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeecc-C
Q 016974 222 FVSGSCDSTARLWDTRVASRAVRTFHG-------HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH-G 293 (379)
Q Consensus 222 l~sg~~d~~i~vwd~~~~~~~~~~~~~-------h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-~ 293 (379)
. .|+.++.|..|+.... ....+.. ....|.++...++|.+. .|+.++-|..||..++... .+.... .
T Consensus 324 W-igt~~~Gl~~~~~~~~--~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~-~~~~~~~~ 398 (795)
T 4a2l_A 324 W-LGTYFGGLNYYHPIRN--RFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFT-SYTLQEDE 398 (795)
T ss_dssp E-EEESSSCEEEECGGGG--SSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEE-EECCC---
T ss_pred E-EEECCCCeEEeCCCcc--cceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEE-EEecCCCC
Confidence 4 4677777888886532 1222221 13468999998888744 5777778999998765432 222111 0
Q ss_pred ---CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEE
Q 016974 294 ---ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIW 370 (379)
Q Consensus 294 ---~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw 370 (379)
.-....|.++..+++|+.|..|+.++.|.+||..+++...-.......+...|.++...++|.+.+.. .+ -+.+|
T Consensus 399 ~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~ 476 (795)
T 4a2l_A 399 SARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRF 476 (795)
T ss_dssp ---CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEE
T ss_pred cccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEE
Confidence 01124589999999998667788777899999876654332110101234579999999888877654 34 46667
Q ss_pred ecC
Q 016974 371 AFG 373 (379)
Q Consensus 371 ~~~ 373 (379)
+..
T Consensus 477 ~~~ 479 (795)
T 4a2l_A 477 NPE 479 (795)
T ss_dssp ETT
T ss_pred eCC
Confidence 654
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.79 E-value=2e-06 Score=78.25 Aligned_cols=200 Identities=9% Similarity=0.074 Sum_probs=123.0
Q ss_pred cCCCceEEEeeCCCeEEEeecCCC----eeEEEec-CccccC-CccCeEEEEEeCCCCcEEEEecCC------CcEEEEE
Q 016974 168 PDEDTHLITSSGDQTCVLWDITTG----LRTSVFG-GEFQSG-HTADVLSVSISGSNSRMFVSGSCD------STARLWD 235 (379)
Q Consensus 168 ~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~-~~~~~~-h~~~v~~~~~~~~~~~~l~sg~~d------~~i~vwd 235 (379)
++....++++..++.|.++|+.+. .....++ .+.... ....-..+.+.| ++ +++++..+ +.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 556667788899999999998754 3333331 111000 001122344555 44 66665544 7899999
Q ss_pred ccCCccceEEEecc--c-CCeeEEEEccCCCEEEEee-------------------CCCeEEEEECCCCceeEEEeeccC
Q 016974 236 TRVASRAVRTFHGH--E-GDVNTVKFFPDGNRFGTGS-------------------DDGTCRLFDIRTGHQLQVYYQQHG 293 (379)
Q Consensus 236 ~~~~~~~~~~~~~h--~-~~v~~v~~sp~g~~l~s~s-------------------~D~~i~iwd~~~~~~~~~~~~~~~ 293 (379)
..+. +.+..+... . .--..+.|+|+++.+++.. .+.+|.+||+.+++.++.+...
T Consensus 171 ~~T~-~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg-- 247 (462)
T 2ece_A 171 HYSF-EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG-- 247 (462)
T ss_dssp TTTC-CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC--
T ss_pred CCCC-eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC--
Confidence 8755 455555421 1 1234588899999888874 3689999999988766655431
Q ss_pred CCCCCCeEEEEE--ccCCCEEEEEEe------cCcEEEEeCCCceE--EEe--ccccc-CC-----------ccCceeEE
Q 016974 294 ENEIPHVTSIAF--SISGRLLFAGYS------NGDCYVWDTLLAKV--VLN--LGSLQ-NS-----------HEGRITCL 349 (379)
Q Consensus 294 ~~~~~~v~~~~f--s~~g~~l~sg~~------dg~i~iwd~~~~~~--~~~--~~~~~-~~-----------h~~~v~~~ 349 (379)
.. ......+.| +|+|++++++.. +++|.+|....+.. ... +.... .. -......+
T Consensus 248 ~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 248 EE-NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp TT-EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CC-CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 11 112345555 999999988875 45787765433321 111 11100 00 01346788
Q ss_pred EECCCCCeEEEeeC-CCcEEEEecC
Q 016974 350 GLSADGSALCTGSW-DTNLKIWAFG 373 (379)
Q Consensus 350 ~~s~d~~~l~s~s~-D~~i~vw~~~ 373 (379)
.+||||++|..+.+ ++.|.+|++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEec
Confidence 99999999998777 6789999985
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.76 E-value=1.3e-07 Score=88.98 Aligned_cols=256 Identities=13% Similarity=0.104 Sum_probs=147.8
Q ss_pred CCCCeEEEE-cCCCcEEEEECCCCceeeEeecCC-cceEEEEE-C-CCCCEEEEee------------------CCCcEE
Q 016974 77 SERNRIVSA-SQDGRLIVWNALTSQKTHAIKLPC-AWVMTCAF-S-PTGQSVACGG------------------LDSVCS 134 (379)
Q Consensus 77 ~~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~-s-~~g~~l~~~~------------------~d~~i~ 134 (379)
+||++|+.+ ..+..|.+-|+.+.+....+..+. .....+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 377776655 456679999999999888666543 44677787 5 9999999885 244677
Q ss_pred EEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-Ce--------------EEEeecCCCeeEEEecC
Q 016974 135 IFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-QT--------------CVLWDITTGLRTSVFGG 199 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~--------------i~~wd~~~~~~~~~~~~ 199 (379)
+.|..+.. .......+- .-..++++|++. ++++.+.+ .. |.+.|......
T Consensus 179 vID~~t~~------v~~qI~Vgg--~pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~------ 243 (595)
T 1fwx_A 179 AVDADKWE------VAWQVLVSG--NLDNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK------ 243 (595)
T ss_dssp EEETTTTE------EEEEEEESS--CCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH------
T ss_pred EEECCCCe------EEEEEEeCC--CccceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeE------
Confidence 77765311 111111111 123356777654 44444433 22 22222211100
Q ss_pred ccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccC--CccceEEEecccCCeeEEEEccCCCEEEEee-CCCeEEE
Q 016974 200 EFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRV--ASRAVRTFHGHEGDVNTVKFFPDGNRFGTGS-DDGTCRL 276 (379)
Q Consensus 200 ~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~--~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s-~D~~i~i 276 (379)
+.+ +++.... +.|.+.|.+. ....+..+.. .....++.++|||+++++++ .+.+|.+
T Consensus 244 --------------~v~-~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsV 303 (595)
T 1fwx_A 244 --------------AIA-AGDYQEL----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTV 303 (595)
T ss_dssp --------------HHH-HTCSEEE----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEE
T ss_pred --------------ecc-CCCeeEE----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEE
Confidence 001 1111111 4599999886 3222444432 34578899999999876665 6889999
Q ss_pred EECCCCc------------eeEEEeeccCCCCCCCeEEEEEccCCCEEEE-EEecCcEEEEeCCC----------ceEEE
Q 016974 277 FDIRTGH------------QLQVYYQQHGENEIPHVTSIAFSISGRLLFA-GYSNGDCYVWDTLL----------AKVVL 333 (379)
Q Consensus 277 wd~~~~~------------~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~s-g~~dg~i~iwd~~~----------~~~~~ 333 (379)
+|+.+.+ ..... . -......++|+|+| ++++ ..-|++|..||... ...+.
T Consensus 304 id~~~~~~~~~~~l~~~~~v~~~v--~----vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~ 376 (595)
T 1fwx_A 304 LDVTRFDAVFYENADPRSAVVAEP--E----LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKD 376 (595)
T ss_dssp EEGGGHHHHHHSCCCGGGGEEECC--B----CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEE
T ss_pred EECcccccccccccCcccceEEEc--C----CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEE
Confidence 9998642 11111 1 11236789999999 5544 55789999999765 33444
Q ss_pred eccc-ccCCccCceeEEEECCCCCeEEEee---CCCcE----------EEEecCc
Q 016974 334 NLGS-LQNSHEGRITCLGLSADGSALCTGS---WDTNL----------KIWAFGG 374 (379)
Q Consensus 334 ~~~~-~~~~h~~~v~~~~~s~d~~~l~s~s---~D~~i----------~vw~~~~ 374 (379)
.+.. .+.+|...-.++.++|||++|+++. .|+.+ .++++.+
T Consensus 377 kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 377 KLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp EEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred EeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 4421 1112322112335689999999854 35542 6777654
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=3.4e-06 Score=71.23 Aligned_cols=190 Identities=7% Similarity=0.033 Sum_probs=124.2
Q ss_pred cceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccC
Q 016974 159 GYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRV 238 (379)
Q Consensus 159 ~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~ 238 (379)
.....+.|.. +.++.+.+.++.|+.+|+.++.....+ . ... .-...+++. +.+++...-.++.+.++|..+
T Consensus 55 ~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l---~~~-~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 55 AFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-R---LGN-IFAEGLASD--GERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp CCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-E---CTT-CCEEEEEEC--SSCEEEEESSSCEEEEEETTT
T ss_pred cccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-C---CCC-cceeEEEEe--CCEEEEEEccCCEEEEEECCc
Confidence 3456777763 567788888999999999998655443 1 111 111224443 456777777899999999886
Q ss_pred CccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec
Q 016974 239 ASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN 318 (379)
Q Consensus 239 ~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d 318 (379)
. +.+.++.. ...-+.++ +|++.|+.+..++.|.++|..+.+.+..+...........++.+.|. +|+..+....+
T Consensus 126 l-~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s 200 (268)
T 3nok_A 126 P-QRERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHS 200 (268)
T ss_dssp T-EEEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTC
T ss_pred C-cEEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCC
Confidence 5 55666653 22223444 67787777667889999999998887766443222223346777776 77654444467
Q ss_pred CcEEEEeCCCceEEEecccc---------cCCccCceeEEEECCCCCeEEEee
Q 016974 319 GDCYVWDTLLAKVVLNLGSL---------QNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 319 g~i~iwd~~~~~~~~~~~~~---------~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
..|.+-|..+++.+..+... ...-..-.+.||++|+++.|...+
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 79999999999887665321 011123568999999876665544
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.73 E-value=0.00011 Score=73.38 Aligned_cols=287 Identities=10% Similarity=0.060 Sum_probs=170.5
Q ss_pred cccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEee-------cCCcceEEEEECCCCCEEEEeeCCCcEEEEEcC
Q 016974 67 AGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIK-------LPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 139 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~ 139 (379)
...|.++...+++.+.+ |+.++-+.+||..+++...... .....|.++...++|.+.+.. .+ -+.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhheEcCC
Confidence 45688888777776554 4444458999987655432211 123568999999988866654 34 47788765
Q ss_pred CCCCCCCCcceeee-----ecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCcc-ccCCccCeEEEE
Q 016974 140 SPTDKDGNLPVSRM-----LSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF-QSGHTADVLSVS 213 (379)
Q Consensus 140 ~~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~~h~~~v~~~~ 213 (379)
... ...... ..-....|.++...+++ .|-.|+.++-|..|+..++.......... ..-....|.++.
T Consensus 291 ~~~-----~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 291 TDS-----FASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV 363 (795)
T ss_dssp TTE-----EEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE
T ss_pred CCe-----EEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE
Confidence 321 100000 00123467777765543 46677888889999876543222111000 011234588887
Q ss_pred EeCCCCcEEEEecCCCcEEEEEccCCccceEEEec---------ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce
Q 016974 214 ISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG---------HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 284 (379)
Q Consensus 214 ~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~---------h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~ 284 (379)
... ++.+. .|+.++.|..||.... ....+.. ....|.++...++|..|..|+.++-+..+|..+++.
T Consensus 364 ~d~-~g~lW-iGt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 364 EDK-DKNLW-IGTNDGGLNLYNPITQ--RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp ECT-TSCEE-EEESSSCEEEECTTTC--CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE
T ss_pred ECC-CCCEE-EEECCCCeEEEcCCCC--cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE
Confidence 765 45555 4777777999987543 1222210 135688999888888466677777899999887653
Q ss_pred eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccc--ccCCccCceeEEEECCCCCeEEEee
Q 016974 285 LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGS--LQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~--~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
. .+...........|.++..+++|++.++. . +.|.+||..+++....... ........|.++...++|.+.+...
T Consensus 440 ~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 440 E-NFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp E-EECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred E-EeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 3 22211111122468999999988865544 4 4599999876654322110 0011346799999999998877554
Q ss_pred CCCcEEEEec
Q 016974 363 WDTNLKIWAF 372 (379)
Q Consensus 363 ~D~~i~vw~~ 372 (379)
+ -|..|+.
T Consensus 517 -~-Gl~~~~~ 524 (795)
T 4a2l_A 517 -E-GLSVFKQ 524 (795)
T ss_dssp -S-CEEEEEE
T ss_pred -C-ceEEEeC
Confidence 4 4666654
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.71 E-value=6.9e-06 Score=80.33 Aligned_cols=280 Identities=15% Similarity=0.152 Sum_probs=159.5
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecCCcc----------e-EEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW----------V-MTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~----------v-~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
+..|+.++.++.|..+|..+|+.+..+...... + ..+++ .+..++.++.|+.+..+|..+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~----- 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGK----- 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCC-----
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCC-----
Confidence 557778888999999999999998877543211 0 01111 35677788889999888876532
Q ss_pred cceeeeeccc--ccceEEEEEecCCCceEEEeeC------CCeEEEeecCCCeeEEEecCcc-cc---------------
Q 016974 148 LPVSRMLSGH--KGYVSCCQYVPDEDTHLITSSG------DQTCVLWDITTGLRTSVFGGEF-QS--------------- 203 (379)
Q Consensus 148 ~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~-~~--------------- 203 (379)
.......... ...+.+.-.. .++ .++.+.. ++.|..+|..+|...-.+...- ..
T Consensus 139 ~~W~~~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 139 AIWSQQTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp EEEEEECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred EeeeeccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccccccccccc
Confidence 1111111000 0011100001 123 3444432 5899999999987654432100 00
Q ss_pred ----------CCccCeEEEEEeCCCCcEEEEecCCC-------------------cEEEEEccCCccceEEEec--cc--
Q 016974 204 ----------GHTADVLSVSISGSNSRMFVSGSCDS-------------------TARLWDTRVASRAVRTFHG--HE-- 250 (379)
Q Consensus 204 ----------~h~~~v~~~~~~~~~~~~l~sg~~d~-------------------~i~vwd~~~~~~~~~~~~~--h~-- 250 (379)
++......+++.+.. .+++.++.++ .|.-+|..+.+ .+-.++. |.
T Consensus 217 ~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~-~~W~~~~~~~~~w 294 (668)
T 1kv9_A 217 WQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK-LAWHYQVTPGDSW 294 (668)
T ss_dssp CCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC-EEEEEESSTTCCS
T ss_pred CCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc-eeeEeecCCCccc
Confidence 000111234566533 4566666555 38888887653 3433332 22
Q ss_pred -----CCeeEEEEccCCC---EEEEeeCCCeEEEEECCCCceeEEEeecc-----------CC---------C-------
Q 016974 251 -----GDVNTVKFFPDGN---RFGTGSDDGTCRLFDIRTGHQLQVYYQQH-----------GE---------N------- 295 (379)
Q Consensus 251 -----~~v~~v~~sp~g~---~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-----------~~---------~------- 295 (379)
.+.....+..+|+ .++.++.+|.+.++|..+|+.+....... +. .
T Consensus 295 d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 374 (668)
T 1kv9_A 295 DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMW 374 (668)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEES
T ss_pred cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEEC
Confidence 2222223334665 68899999999999999998773321100 00 0
Q ss_pred ----CCCCeEEEEEccCCCEEEEEE------------------------------------ecCcEEEEeCCCceEEEec
Q 016974 296 ----EIPHVTSIAFSISGRLLFAGY------------------------------------SNGDCYVWDTLLAKVVLNL 335 (379)
Q Consensus 296 ----~~~~v~~~~fs~~g~~l~sg~------------------------------------~dg~i~iwd~~~~~~~~~~ 335 (379)
.......++|+|+..+++... .+|.|+.||..+++.....
T Consensus 375 p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~ 454 (668)
T 1kv9_A 375 PSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKV 454 (668)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEE
T ss_pred CCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEc
Confidence 000012368888877766532 2378999999999887654
Q ss_pred ccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 336 GSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 336 ~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.. ..++....+...+..|+.++.|+.++.|+...
T Consensus 455 ~~-----~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 455 PY-----PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp EE-----SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cC-----CCCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 21 11222233445678899999999999999653
No 246
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.69 E-value=8.6e-06 Score=79.61 Aligned_cols=274 Identities=11% Similarity=0.060 Sum_probs=145.0
Q ss_pred EEEeeC-CCCeEEEEcCCC-----------cEEEEECCCCcee--eEeec-CCcceEEEEECCCCCEEEEeeC-CCcEEE
Q 016974 72 SLDWTS-ERNRIVSASQDG-----------RLIVWNALTSQKT--HAIKL-PCAWVMTCAFSPTGQSVACGGL-DSVCSI 135 (379)
Q Consensus 72 ~~~~~~-~~~~l~s~s~D~-----------~v~iwd~~~~~~~--~~~~~-~~~~v~~~~~s~~g~~l~~~~~-d~~i~i 135 (379)
++++.+ +++.++.|+.+. .+.+||..+++-. ..+.. +.....++++.++|++++.||. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456667 788888887543 5889998876532 22221 2233345678899999999985 457899
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEee-CC-----CeEEEeecCCCeeEEEec---CccccCCc
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSS-GD-----QTCVLWDITTGLRTSVFG---GEFQSGHT 206 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~d-----~~i~~wd~~~~~~~~~~~---~~~~~~h~ 206 (379)
||..... +.....+...+.. .++...+++ .+++.|+ .+ ..+.+||..++.....-. ........
T Consensus 270 yd~~t~~-----W~~~~~~~~~R~~-~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~ 342 (656)
T 1k3i_A 270 YDSSSDS-----WIPGPDMQVARGY-QSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK 342 (656)
T ss_dssp EEGGGTE-----EEECCCCSSCCSS-CEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT
T ss_pred ecCcCCc-----eeECCCCCccccc-cceEEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc
Confidence 9876421 1111111111111 123444544 5677777 44 568999998765433210 00000100
Q ss_pred cCeEEEEEeCCCCcEEEEecCC---------CcEEEEEccCCccceEEEeccc---------CCeeEEEEcc-CCCEEEE
Q 016974 207 ADVLSVSISGSNSRMFVSGSCD---------STARLWDTRVASRAVRTFHGHE---------GDVNTVKFFP-DGNRFGT 267 (379)
Q Consensus 207 ~~v~~~~~~~~~~~~l~sg~~d---------~~i~vwd~~~~~~~~~~~~~h~---------~~v~~v~~sp-~g~~l~s 267 (379)
..+ + ..++.+++.|+.+ ..+..||...... ......+. ..-.++.|.. ++++++.
T Consensus 343 ~~~----~-~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~ 416 (656)
T 1k3i_A 343 QGL----Y-RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTF 416 (656)
T ss_dssp TGG----G-TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEE
T ss_pred cce----e-ecCCceEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEE
Confidence 000 0 0123334444433 3567788764421 11111111 1223445543 7788888
Q ss_pred eeCCC-----------eEEEEECCCCceeEEEeeccCCCCCCC-eEEEEEccCCCEEEEEEec-----------CcEEEE
Q 016974 268 GSDDG-----------TCRLFDIRTGHQLQVYYQQHGENEIPH-VTSIAFSISGRLLFAGYSN-----------GDCYVW 324 (379)
Q Consensus 268 ~s~D~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~fs~~g~~l~sg~~d-----------g~i~iw 324 (379)
|+.++ .+.+||..+..-.... ..... ... -.+++..|+|++++.|+.+ ..+.+|
T Consensus 417 GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp--~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~y 493 (656)
T 1k3i_A 417 GGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-SNGLY--FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIY 493 (656)
T ss_dssp CCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-TTCCS--SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEE
T ss_pred eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-cCCCC--CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEE
Confidence 88543 6888888765432221 00111 111 1244567899999998754 468999
Q ss_pred eCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeC
Q 016974 325 DTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSW 363 (379)
Q Consensus 325 d~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~ 363 (379)
|..+.+-.. +... ......-.+..+.|||+.++.|+.
T Consensus 494 dp~t~~W~~-~~~~-~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 494 VPEQDTFYK-QNPN-SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EGGGTEEEE-CCCC-SSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCCceee-cCCC-CCccccccHhhcCCCcEEEecCCC
Confidence 987655332 2211 111111133456799999999885
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.67 E-value=3.8e-05 Score=67.85 Aligned_cols=246 Identities=7% Similarity=-0.012 Sum_probs=139.9
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeee-----------------cccccceEEEEEecCCCceE
Q 016974 112 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRML-----------------SGHKGYVSCCQYVPDEDTHL 174 (379)
Q Consensus 112 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-----------------~~h~~~v~~~~~~~~~~~~l 174 (379)
...++++++|+++.++..++.|..|+..... ....... ......+..+++.++++. |
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l 94 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-----FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-L 94 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTC-----EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-E
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCc-----eEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-E
Confidence 4567788998877778888888888765321 1000000 001124677888763334 5
Q ss_pred EEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecC-----------------CCcEEEEEcc
Q 016974 175 ITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSC-----------------DSTARLWDTR 237 (379)
Q Consensus 175 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-----------------d~~i~vwd~~ 237 (379)
+.+...+.|..+|..++...... .............+++.+.+++++++... ++.|..||..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLA-TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEE-SEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCEEEEeCCCCEEEEec-ccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 55544555888887655322211 11000111235667777524566665432 3567777764
Q ss_pred CCccceEEEecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCc--eeEEEeeccCCCCCCCeEEEEEccCCCEEEE
Q 016974 238 VASRAVRTFHGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGH--QLQVYYQQHGENEIPHVTSIAFSISGRLLFA 314 (379)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~--~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~s 314 (379)
.. . ...+.......+.++|+|+|+.|..+ +..+.|.+|++.... ....+.. .. + ...++++++|++.++
T Consensus 174 ~~-~-~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~---g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 174 TK-E-TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IP---N-PGNIKRNADGHFWVS 245 (322)
T ss_dssp TT-E-EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CS---S-EEEEEECTTSCEEEE
T ss_pred CC-E-EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CC---C-CCCeEECCCCCEEEE
Confidence 33 2 22222223446789999999865444 567899999987521 1222221 11 2 578999999987666
Q ss_pred EEe----------cCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 315 GYS----------NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 315 g~~----------dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
... .+.|..+|.. ++....+..........+.++++ .+++..++...++.|..+++..
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 544 4678899864 55554442211111234666766 4677777777788899998764
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.65 E-value=1.6e-05 Score=77.68 Aligned_cols=264 Identities=13% Similarity=0.120 Sum_probs=146.9
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecCCc-ceEEEEECC--CCCEEEEeeC------CCcEEEEEcCCCCCCCCCcc
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCA-WVMTCAFSP--TGQSVACGGL------DSVCSIFNLNSPTDKDGNLP 149 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~--~g~~l~~~~~------d~~i~iw~~~~~~~~~~~~~ 149 (379)
+..|+.++.|+.|..+|..+|+.+........ ....+..+| .+..++.+.. ++.+..+|..+... .
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~-----~ 191 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKL-----A 191 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-----E
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcE-----E
Confidence 45688889999999999999999887765311 000000111 1334444432 57788888765321 0
Q ss_pred eeeee-c----------------------------ccccceEEEEEecCCCceEEEeeCCC-------------------
Q 016974 150 VSRML-S----------------------------GHKGYVSCCQYVPDEDTHLITSSGDQ------------------- 181 (379)
Q Consensus 150 ~~~~~-~----------------------------~h~~~v~~~~~~~~~~~~l~s~~~d~------------------- 181 (379)
..... . ++.......++.|.. ..++.++.++
T Consensus 192 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 192 WRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 00000 0 011111235666654 3566666665
Q ss_pred eEEEeecCCCeeEEEecCccccCCc-------cCeEEEEEeCCCC---cEEEEecCCCcEEEEEccCCccceEEEeccc-
Q 016974 182 TCVLWDITTGLRTSVFGGEFQSGHT-------ADVLSVSISGSNS---RMFVSGSCDSTARLWDTRVASRAVRTFHGHE- 250 (379)
Q Consensus 182 ~i~~wd~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~---~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~- 250 (379)
.|..+|..+|...-.+... .|. .......+.. ++ .+++.++.+|.+.++|..+.+ .+....-..
T Consensus 271 ~v~AlD~~tG~~~W~~~~~---~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~-~l~~~~~~~~ 345 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVT---PGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNGK-LISAEKFGKV 345 (668)
T ss_dssp EEEEECTTTCCEEEEEESS---TTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCC-EEEEEESSCC
T ss_pred eEEEEcCCCCceeeEeecC---CCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCCC-Eecccccccc
Confidence 4889999998765444211 121 1222222211 33 368889999999999987653 331111000
Q ss_pred ----------C-C------------------------eeEEEEccCCCEEEEe---------------------------
Q 016974 251 ----------G-D------------------------VNTVKFFPDGNRFGTG--------------------------- 268 (379)
Q Consensus 251 ----------~-~------------------------v~~v~~sp~g~~l~s~--------------------------- 268 (379)
+ + -..++++|+...+...
T Consensus 346 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 346 TWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp CSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred ccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccc
Confidence 0 0 0126778876655431
Q ss_pred ---------eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEeccccc
Q 016974 269 ---------SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQ 339 (379)
Q Consensus 269 ---------s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 339 (379)
..++.|..||+.+++.+-...... +.....+...|.+|+.|+.||.++.||..+++.+..+..-.
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cccCCCCCCCccceEEEEeCCCCcEEEEccCCC------CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 134889999999998765443211 12223445678899999999999999999998876653221
Q ss_pred CCccCceeEEEECCCCC-eEEEee
Q 016974 340 NSHEGRITCLGLSADGS-ALCTGS 362 (379)
Q Consensus 340 ~~h~~~v~~~~~s~d~~-~l~s~s 362 (379)
.....++. +..+|+ +++.++
T Consensus 500 ~~~~~p~~---~~~~G~~yva~~~ 520 (668)
T 1kv9_A 500 GIVAAPMT---FELAGRQYVAIMA 520 (668)
T ss_dssp CCCSCCEE---EEETTEEEEEEEE
T ss_pred CcccCceE---EEECCEEEEEEEe
Confidence 22223432 334665 444443
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.62 E-value=7.4e-05 Score=65.98 Aligned_cols=240 Identities=15% Similarity=0.091 Sum_probs=138.3
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecC--------------------CcceEEEEECC-CCCEEEEee
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLP--------------------CAWVMTCAFSP-TGQSVACGG 128 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--------------------~~~v~~~~~s~-~g~~l~~~~ 128 (379)
..+++|.+++++++++..++.|..||..+++.. .+... ......+++.+ +|+++++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 456889999887888889999999997765432 22110 12467889998 666555533
Q ss_pred CCCcEEEEEcCCCCCCCCCcc-eeeeeccc-ccceEEEEEec-CCCceEEEee-----------------CCCeEEEeec
Q 016974 129 LDSVCSIFNLNSPTDKDGNLP-VSRMLSGH-KGYVSCCQYVP-DEDTHLITSS-----------------GDQTCVLWDI 188 (379)
Q Consensus 129 ~d~~i~iw~~~~~~~~~~~~~-~~~~~~~h-~~~v~~~~~~~-~~~~~l~s~~-----------------~d~~i~~wd~ 188 (379)
.+.+..++.... ... ......+. ......+++.+ ++ .+.++-. .++.|..||.
T Consensus 100 -~~~i~~~d~~~g-----~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 100 -YYHLSVVGSEGG-----HATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp -TTEEEEECTTCE-----ECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred -CCCEEEEeCCCC-----EEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 344666664421 111 11111111 12356678877 65 3444322 2367888887
Q ss_pred CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCc-cceEEEecccCCeeEEEEccCCCEEEE
Q 016974 189 TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVNTVKFFPDGNRFGT 267 (379)
Q Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~-~~~~~~~~h~~~v~~v~~sp~g~~l~s 267 (379)
.++....... . ......+++++....++++-...+.|.++++.... .....+....+ ...+++.++|+++++
T Consensus 173 ~~~~~~~~~~-~-----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 173 STKETTLLLK-E-----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp TTTEEEEEEE-E-----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEE
T ss_pred CCCEEEEecc-C-----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEE
Confidence 6664322211 0 11234577876434466666777899999976321 11122221223 788999999987777
Q ss_pred eeC----------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC
Q 016974 268 GSD----------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 327 (379)
Q Consensus 268 ~s~----------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~ 327 (379)
... .+.|..+|.. ++.+..+....+. ....++.+++ .+|++.++...++.|.+++..
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~-~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF-AGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT-TTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred ecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC-ccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 654 4678888864 6666555433221 1234566666 456555555567788888753
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.62 E-value=2.8e-05 Score=65.08 Aligned_cols=192 Identities=13% Similarity=0.090 Sum_probs=122.4
Q ss_pred cceEEEEEecCCCceEEEeeCC--CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEc
Q 016974 159 GYVSCCQYVPDEDTHLITSSGD--QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDT 236 (379)
Q Consensus 159 ~~v~~~~~~~~~~~~l~s~~~d--~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~ 236 (379)
.....+.|.+ +.++.+.+.+ ..|+.+|+.++......... ...--..+++. +.+++...-.++.+.++|.
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~----~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVP----PPYFGAGIVAW--RDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----TTCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----CCcceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence 3566788875 4556666665 48999999999776654321 11111233443 4567777778999999998
Q ss_pred cCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE
Q 016974 237 RVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
.+. +.+.++.. ...-+.++ ++++.|+.+..++.|.++|..+.+.+..+...........++-+.+. +|+..+...
T Consensus 93 ~tl-~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw 167 (243)
T 3mbr_X 93 ATL-TPRARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW 167 (243)
T ss_dssp TTT-EEEEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred CcC-cEEEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC
Confidence 765 45666653 22234444 56776666656889999999998877665432222122345666665 666554444
Q ss_pred ecCcEEEEeCCCceEEEeccc--ccC-------CccCceeEEEECCCCCeEEEeeC
Q 016974 317 SNGDCYVWDTLLAKVVLNLGS--LQN-------SHEGRITCLGLSADGSALCTGSW 363 (379)
Q Consensus 317 ~dg~i~iwd~~~~~~~~~~~~--~~~-------~h~~~v~~~~~s~d~~~l~s~s~ 363 (379)
.+..|.+-|..+++.+..+.. +.. .-..-.+.||++|+++.|...+.
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 677999999999987765432 111 11235689999998776666554
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.60 E-value=0.00014 Score=63.78 Aligned_cols=229 Identities=13% Similarity=0.073 Sum_probs=127.8
Q ss_pred cceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC-CC-eEEEee
Q 016974 110 AWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG-DQ-TCVLWD 187 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-d~-~i~~wd 187 (379)
.....++|+++|+++++-..++.|..||.+.. . .... ........+++.+++. ++++... ++ .|..+|
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~------~--~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN------Q--QIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLV 101 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC------E--EEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc------e--EEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEc
Confidence 34667888898887777667777777765421 1 1111 1123567788888754 4444333 33 466667
Q ss_pred cCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEec---------ccCCeeEEEE
Q 016974 188 ITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG---------HEGDVNTVKF 258 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~---------h~~~v~~v~~ 258 (379)
..++........ ........++.. .++..+++...++.|..+|.......+....+ .....+.+
T Consensus 102 ~~~g~~~~~~~~----~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 102 KSDGTVETLLTL----PDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp CTTSCEEEEEEC----TTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred CCCCeEEEEEeC----CCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 666654332211 111112233333 24455666666788888886532111111111 11234555
Q ss_pred ccCCCEE-EEeeCCCeEEEEECCC-Cce--eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEe
Q 016974 259 FPDGNRF-GTGSDDGTCRLFDIRT-GHQ--LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLN 334 (379)
Q Consensus 259 sp~g~~l-~s~s~D~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~ 334 (379)
+|+++.| ++-...+.|..+++.. +.. ...+... .....++++++|++.++....+.|.++|.. ++....
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~------~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ------TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES------CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEE
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc------CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEE
Confidence 7888755 4556678999999864 321 1222111 123568999999887776778899999964 443221
Q ss_pred cccccCCccCceeEEEEC---CCCCeEEEeeCC
Q 016974 335 LGSLQNSHEGRITCLGLS---ADGSALCTGSWD 364 (379)
Q Consensus 335 ~~~~~~~h~~~v~~~~~s---~d~~~l~s~s~D 364 (379)
... .......++++|. ||++.|..++..
T Consensus 248 -~~~-~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 248 -AQA-EQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -ECG-GGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -eec-ccccCCceEEEEecccCCCCEEEEECCC
Confidence 111 1122457899998 898877766554
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.59 E-value=4.9e-05 Score=64.81 Aligned_cols=197 Identities=9% Similarity=-0.041 Sum_probs=123.8
Q ss_pred EEEEEeeCCCCeEEEEcC--CCcEEEEECCCCceeeEeecCCc-ceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCC
Q 016974 70 VYSLDWTSERNRIVSASQ--DGRLIVWNALTSQKTHAIKLPCA-WVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
...+.|++++.++++.+. ++.|++.|..+++.+..+..... ..-.+++.. ++..++.-.++.+.++|..+..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~---- 97 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLS---- 97 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTE----
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCc----
Confidence 578999998755555543 68999999999999888765432 233444442 2444555568899999976421
Q ss_pred Ccceeeeec-ccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 147 NLPVSRMLS-GHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 147 ~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
....+. + ...- ..+.+++...++ +..+++|.++|..+......+..............+.+. ++.+++..
T Consensus 98 ---v~~~i~~g-~~~g--~glt~Dg~~l~v-s~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~ 168 (266)
T 2iwa_A 98 ---NIKNFTHQ-MKDG--WGLATDGKILYG-SDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANI 168 (266)
T ss_dssp ---EEEEEECC-SSSC--CEEEECSSSEEE-ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE
T ss_pred ---EEEEEECC-CCCe--EEEEECCCEEEE-ECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEec
Confidence 222222 2 1111 234456655444 456899999999887655554322110011234566666 45677777
Q ss_pred cCCCcEEEEEccCCccceEEEecc-------------cCCeeEEEEccCCCE-EEEeeCCCeEEEEECCC
Q 016974 226 SCDSTARLWDTRVASRAVRTFHGH-------------EGDVNTVKFFPDGNR-FGTGSDDGTCRLFDIRT 281 (379)
Q Consensus 226 ~~d~~i~vwd~~~~~~~~~~~~~h-------------~~~v~~v~~sp~g~~-l~s~s~D~~i~iwd~~~ 281 (379)
..++.|.+.|..+. +.+..+.-. ....+.++|+|+++. ++++...+++...++..
T Consensus 169 ~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 WQTDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTSSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 67889999999865 455555421 024589999999875 45666778888888754
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.57 E-value=0.0003 Score=61.59 Aligned_cols=236 Identities=11% Similarity=0.070 Sum_probs=135.3
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCc--EEEEEcCCCCCCC
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV--CSIFNLNSPTDKD 145 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~--i~iw~~~~~~~~~ 145 (379)
.....++|+++++++++-..++.|..||... +....+.. ......++++++|+++++...... +..++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~----- 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD----- 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT-----
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC-----
Confidence 3467899999998777777889999999764 33333333 346788999999997666544333 44444332
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCe-eEEEecCc----cccCCccCeEEEEEeCCCCc
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGL-RTSVFGGE----FQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~----~~~~h~~~v~~~~~~~~~~~ 220 (379)
+......... .......+...+ +...+++-..++.|..+|..++. ........ ...........+ ++.+..
T Consensus 105 g~~~~~~~~~-~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 105 GTVETLLTLP-DAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp SCEEEEEECT-TCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred CeEEEEEeCC-CccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 2221111111 111122233333 23344555568888888876542 11111100 000111223344 443456
Q ss_pred EEEEecCCCcEEEEEccCCcc--ceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCC
Q 016974 221 MFVSGSCDSTARLWDTRVASR--AVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIP 298 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 298 (379)
++++-...+.|..+|+..... ....+. .......++++++|+++++....+.|.++|.. ++........ ....
T Consensus 181 lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~---~~~~ 255 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE---QGVI 255 (306)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG---GTCT
T ss_pred EEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc---cccC
Confidence 777778888999999863111 112221 12346778999999988887778899999975 5442211111 1124
Q ss_pred CeEEEEEc---cCCCEEEEEEecC
Q 016974 299 HVTSIAFS---ISGRLLFAGYSNG 319 (379)
Q Consensus 299 ~v~~~~fs---~~g~~l~sg~~dg 319 (379)
..++++|. |+++.|+.....+
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEECTT
T ss_pred CceEEEEecccCCCCEEEEECCCC
Confidence 57899999 8988887776543
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.56 E-value=5.3e-05 Score=72.56 Aligned_cols=279 Identities=13% Similarity=0.027 Sum_probs=154.3
Q ss_pred CCeEEEEcC-CCcEEEEEC-CCCceeeEeecCCcc----------e-EEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCC
Q 016974 79 RNRIVSASQ-DGRLIVWNA-LTSQKTHAIKLPCAW----------V-MTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 79 ~~~l~s~s~-D~~v~iwd~-~~~~~~~~~~~~~~~----------v-~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~ 145 (379)
+..++.++. ++.|..+|. .+|+.+......... + ...++ .+..++.++.|+.+..+|..+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~--- 136 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGK--- 136 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC---
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCC---
Confidence 456777777 899999999 899998877543210 0 01111 35677778888988888876432
Q ss_pred CCcceeeeeccccc--ceEEEEEecCCCceEEEeeC------CCeEEEeecCCCeeEEEecCcccc--C-----------
Q 016974 146 GNLPVSRMLSGHKG--YVSCCQYVPDEDTHLITSSG------DQTCVLWDITTGLRTSVFGGEFQS--G----------- 204 (379)
Q Consensus 146 ~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~~~--~----------- 204 (379)
......+..+.. .+.+.-.. .++. ++.++. ++.|..+|..++...-.+...... .
T Consensus 137 --~~W~~~~~~~~~~~~~~~~P~v-~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~ 212 (571)
T 2ad6_A 137 --INWEVEVCDPKVGSTLTQAPFV-AKDT-VLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANP 212 (571)
T ss_dssp --EEEEEECCCGGGTCBCCSCCEE-ETTE-EEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred --EEEEecCCCCCccceeccCCEE-ECCE-EEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccc
Confidence 111111111110 11110011 1233 444443 799999999998755433211000 0
Q ss_pred ------------------C-ccCe-EEEEEeCCCCcEEEEecC------------C----CcEEEEEccCCccceEEEec
Q 016974 205 ------------------H-TADV-LSVSISGSNSRMFVSGSC------------D----STARLWDTRVASRAVRTFHG 248 (379)
Q Consensus 205 ------------------h-~~~v-~~~~~~~~~~~~l~sg~~------------d----~~i~vwd~~~~~~~~~~~~~ 248 (379)
+ ...+ ..+++.+..+.+++ +.. | +.|..+|..+. +.+-.++.
T Consensus 213 ~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~-~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG-~~~W~~~~ 290 (571)
T 2ad6_A 213 HYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYY-GSGNPAPWNETMRPGDNKWTMTIWGRDLDTG-MAKWGYQK 290 (571)
T ss_dssp GGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEE-ECCCCSCSCGGGSCSCCTTTTEEEEEETTTC-CEEEEEES
T ss_pred cccccccccccCcccceecCCCCeeeeEEEcCCCCeEEE-ECCCCccccCCccCCCceeEEEEEEEecCCC-cEEEEecC
Confidence 0 0000 12344443443333 332 1 25888888765 33333331
Q ss_pred --cc--------CCeeEEEEccCCC---EEEEeeCCCeEEEEECCCCceeEEEeeccCCC--------CCCC--------
Q 016974 249 --HE--------GDVNTVKFFPDGN---RFGTGSDDGTCRLFDIRTGHQLQVYYQQHGEN--------EIPH-------- 299 (379)
Q Consensus 249 --h~--------~~v~~v~~sp~g~---~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~-------- 299 (379)
|. .++. +...++|+ .++.++.+|.+.++|..+|+.+-.+......+ ...+
T Consensus 291 ~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~ 369 (571)
T 2ad6_A 291 TPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFAT 369 (571)
T ss_dssp STTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCC
T ss_pred CCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCC
Confidence 21 1221 22235774 57788899999999999998775542211000 0000
Q ss_pred ------------------eEEEEEccCCCEEEEEEe-------------------------------------cCcEEEE
Q 016974 300 ------------------VTSIAFSISGRLLFAGYS-------------------------------------NGDCYVW 324 (379)
Q Consensus 300 ------------------v~~~~fs~~g~~l~sg~~-------------------------------------dg~i~iw 324 (379)
...++|+|+..++++... +|.|+.|
T Consensus 370 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~ 449 (571)
T 2ad6_A 370 RMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAF 449 (571)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEE
T ss_pred CCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEE
Confidence 134688998888877643 4789999
Q ss_pred eCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 325 DTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 325 d~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
|..+++....... ..++....+...+..|+.++.|+.|+.||...
T Consensus 450 D~~tG~~~W~~~~-----~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 450 DLTTGKAKWTKWE-----KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CTTTCCEEEEEEE-----SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred ECCCCCEEEEecC-----CCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 9988887665421 11222222223466777899999999999654
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.51 E-value=0.0001 Score=62.14 Aligned_cols=196 Identities=15% Similarity=0.160 Sum_probs=115.8
Q ss_pred eecccccccc--EEEEEeeCCCCeEEEEcCCC--cEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEE
Q 016974 60 CRTLQGHAGK--VYSLDWTSERNRIVSASQDG--RLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSI 135 (379)
Q Consensus 60 ~~~l~gH~~~--v~~~~~~~~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~i 135 (379)
++++ .|... ...+.|+ ++.++.+.+.+| .|++.|+.+++.+..+...... ...
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~-Fge-------------------- 90 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY-FGE-------------------- 90 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC-CEE--------------------
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc-cee--------------------
Confidence 3444 45443 4678888 676777777776 8999999999877665443210 000
Q ss_pred EEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 136 FNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
.+.. +++...+..-.++.+.+||..+......+... + .+ ..++.
T Consensus 91 ---------------------------Git~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~---~-eG--~glt~- 134 (262)
T 3nol_A 91 ---------------------------GISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD---G-EG--WGLTH- 134 (262)
T ss_dssp ---------------------------EEEE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECS---S-CC--CCEEE-
T ss_pred ---------------------------EEEE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECC---C-Cc--eEEec-
Confidence 0111 12223333334667777777776665555321 1 11 22222
Q ss_pred CCCCcEEEEecCCCcEEEEEccCCccceEEEec----cc-CCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEee
Q 016974 216 GSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG----HE-GDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQ 290 (379)
Q Consensus 216 ~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~----h~-~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 290 (379)
.+..+++|- .++.|.++|..+.. .+..+.- .. ..++.+.|. +|..++..-.++.|.+.|.++++.+..+..
T Consensus 135 -dg~~L~~Sd-Gs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 135 -NDQYLIMSD-GTPVLRFLDPESLT-PVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp -CSSCEEECC-SSSEEEEECTTTCS-EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred -CCCEEEEEC-CCCeEEEEcCCCCe-EEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 234455544 36779999987553 3333322 11 235567776 777666666788999999999998877654
Q ss_pred ccC-------CCCCCCeEEEEEccCCCEEEEEEec
Q 016974 291 QHG-------ENEIPHVTSIAFSISGRLLFAGYSN 318 (379)
Q Consensus 291 ~~~-------~~~~~~v~~~~fs~~g~~l~sg~~d 318 (379)
... .......+.++|+|+++.|+..+..
T Consensus 211 ~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 211 NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 211 1112356899999998877766544
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.50 E-value=1.4e-05 Score=75.36 Aligned_cols=189 Identities=9% Similarity=0.007 Sum_probs=121.9
Q ss_pred CCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC-CCCcEEEEe------------------cCCC
Q 016974 169 DEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG-SNSRMFVSG------------------SCDS 229 (379)
Q Consensus 169 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~sg------------------~~d~ 229 (379)
++...+++...+..|.+.|+.+......+.. ........+++.. +++.+++.+ -.++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i----p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEI----PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEEC----SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeC----CCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 4444566667788899999999877664421 1223455666632 355555555 3355
Q ss_pred cEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCC-------------------------------------
Q 016974 230 TARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDG------------------------------------- 272 (379)
Q Consensus 230 ~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~------------------------------------- 272 (379)
.+.+.|..+. +...++.-- +.-..++++|+|+++++.+.+.
T Consensus 176 ~vtvID~~t~-~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 176 VFTAVDADKW-EVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEETTTT-EEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred eEEEEECCCC-eEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 7888998754 444444321 2346688999999998888553
Q ss_pred -eEEEEECCC--Cce-eEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEEeCCCce------------EEEec
Q 016974 273 -TCRLFDIRT--GHQ-LQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVWDTLLAK------------VVLNL 335 (379)
Q Consensus 273 -~i~iwd~~~--~~~-~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~~~~~------------~~~~~ 335 (379)
.|.+.|.++ ++. +..+.... ...++.|+|||+++++.+ .+.+|.++|+.+.+ ...++
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~------~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIAN------NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEES------SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred CcEEEEeCcccCCceeEEEEecCC------CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 366667665 333 22222111 234789999999887765 67799999987542 22222
Q ss_pred ccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 336 GSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 336 ~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
... .....++|+|||...++.-.|+.|-+|++..
T Consensus 328 ----~vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 ----ELG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ----BCC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ----CCC-CCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 111 2357899999995555677799999999865
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.48 E-value=0.00011 Score=70.35 Aligned_cols=263 Identities=17% Similarity=0.176 Sum_probs=142.4
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecCCcce-EEEEECC--CCCEEEEeeC------CCcEEEEEcCCCCCCCCCcc
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWV-MTCAFSP--TGQSVACGGL------DSVCSIFNLNSPTDKDGNLP 149 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v-~~~~~s~--~g~~l~~~~~------d~~i~iw~~~~~~~~~~~~~ 149 (379)
+..|+.++.|+.+..+|..+|+.+.......... ..+.-+| .+..++.++. ++.+..+|..+... .
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~-----~ 189 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL-----K 189 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE-----E
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE-----E
Confidence 4567788889999999999999987765432100 0011112 1334444443 78888888765321 0
Q ss_pred eeeeecc----------------------------------ccc-ce-EEEEEecCCCceEEEeeC------------C-
Q 016974 150 VSRMLSG----------------------------------HKG-YV-SCCQYVPDEDTHLITSSG------------D- 180 (379)
Q Consensus 150 ~~~~~~~----------------------------------h~~-~v-~~~~~~~~~~~~l~s~~~------------d- 180 (379)
......+ +.+ .+ ..+++.+..+ .++.+.. |
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLN-LFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCC
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCC-eEEEECCCCccccCCccCCCc
Confidence 0000000 000 00 1234445433 3433332 2
Q ss_pred ---CeEEEeecCCCeeEEEecCcccc-----CCccCeEEEEEeCCCC---cEEEEecCCCcEEEEEccCCccceEEEecc
Q 016974 181 ---QTCVLWDITTGLRTSVFGGEFQS-----GHTADVLSVSISGSNS---RMFVSGSCDSTARLWDTRVASRAVRTFHGH 249 (379)
Q Consensus 181 ---~~i~~wd~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~---~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h 249 (379)
+.|..+|..++...-.+...... .....+. +.... ++ ++++.++.+|.+.++|..+.+ .+....-.
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~-~~w~~~~~ 345 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGN-LIVAEKVD 345 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCC-EEEEEESS
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCC-EEeeeccc
Confidence 36888999988765443211000 1112222 11111 34 356778889999999977653 33222111
Q ss_pred c-------------CCe--------------------------eEEEEccCCCEEEEee---------------------
Q 016974 250 E-------------GDV--------------------------NTVKFFPDGNRFGTGS--------------------- 269 (379)
Q Consensus 250 ~-------------~~v--------------------------~~v~~sp~g~~l~s~s--------------------- 269 (379)
. .++ ..++++|+...+...+
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~ 425 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV 425 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence 0 011 2467888777766553
Q ss_pred ----------------CCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEE
Q 016974 270 ----------------DDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVL 333 (379)
Q Consensus 270 ----------------~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~ 333 (379)
.++.+..||+.+++.+-.+.... .+....+...+..++.++.||.|+.||..+++.+.
T Consensus 426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 35789999999998765543321 11122233456778889999999999999999877
Q ss_pred ecccccCCccCceeEEEECCCCCeEE
Q 016974 334 NLGSLQNSHEGRITCLGLSADGSALC 359 (379)
Q Consensus 334 ~~~~~~~~h~~~v~~~~~s~d~~~l~ 359 (379)
.+..-...+..++ .+..+|+.++
T Consensus 500 ~~~~~~~~~~~p~---~~~~~G~~yv 522 (571)
T 2ad6_A 500 NFKMPSGGIGSPM---TYSFKGKQYI 522 (571)
T ss_dssp EEECSSCCCSCCE---EEEETTEEEE
T ss_pred EEeCCCCcEeeeE---EEEECCEEEE
Confidence 6532211222333 3446776444
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.46 E-value=0.00022 Score=68.51 Aligned_cols=281 Identities=13% Similarity=0.050 Sum_probs=153.9
Q ss_pred CCeEEEEcC-CCcEEEEEC-CCCceeeEeecCCcc-----------eEEEEECCCCCE----EEEeeCCCcEEEEEcCCC
Q 016974 79 RNRIVSASQ-DGRLIVWNA-LTSQKTHAIKLPCAW-----------VMTCAFSPTGQS----VACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 79 ~~~l~s~s~-D~~v~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~s~~g~~----l~~~~~d~~i~iw~~~~~ 141 (379)
+..|+.++. ++.|.-+|. .+|+.+.++...... ...++++|.+.. ++.++.|+.+.-+|..+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 457777787 899999999 899998877653211 122345444444 778888888888887543
Q ss_pred CCCCCCcceeeeecccc--cceEEEEEecCCCceEEEee------CCCeEEEeecCCCeeEEEecCcccc--C-------
Q 016974 142 TDKDGNLPVSRMLSGHK--GYVSCCQYVPDEDTHLITSS------GDQTCVLWDITTGLRTSVFGGEFQS--G------- 204 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~------~d~~i~~wd~~~~~~~~~~~~~~~~--~------- 204 (379)
. ......+..+. ..+.+.-...+ + .++.++ .++.|.-+|..+|...-.+...... .
T Consensus 142 ~-----~~W~~~~~~~~~~~~~~ssP~v~~-g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~ 214 (599)
T 1w6s_A 142 E-----TVWKVENSDIKVGSTLTIAPYVVK-D-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFN 214 (599)
T ss_dssp C-----EEEEEECCCGGGTCBCCSCCEEET-T-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTT
T ss_pred C-----EEEeecCCCCCccceeecCCEEEC-C-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccc
Confidence 2 11111111110 01111001112 3 344444 3899999999998754333211000 0
Q ss_pred ----------------------C-ccCe-EEEEEeCCCCcEEEEecCC----------------CcEEEEEccCCccceE
Q 016974 205 ----------------------H-TADV-LSVSISGSNSRMFVSGSCD----------------STARLWDTRVASRAVR 244 (379)
Q Consensus 205 ----------------------h-~~~v-~~~~~~~~~~~~l~sg~~d----------------~~i~vwd~~~~~~~~~ 244 (379)
+ ...+ ...++.+..+ +++.+..+ +.|.-+|..+. +..-
T Consensus 215 ~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG-~~~W 292 (599)
T 1w6s_A 215 IKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTG-EAKF 292 (599)
T ss_dssp TTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTC-CEEE
T ss_pred cccccccccccccccCCCcceecCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCC-ceee
Confidence 0 0000 1233444333 44444433 36788888765 3333
Q ss_pred EEec--cc--------CCeeEEEEc-cCC---CEEEEeeCCCeEEEEECCCCceeEEEeeccCC--------CCC-----
Q 016974 245 TFHG--HE--------GDVNTVKFF-PDG---NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE--------NEI----- 297 (379)
Q Consensus 245 ~~~~--h~--------~~v~~v~~s-p~g---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~--------~~~----- 297 (379)
.++. |. .++. +... .+| ..++.++.+|.+.++|.++|+.+-........ ...
T Consensus 293 ~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~ 371 (599)
T 1w6s_A 293 GYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRD 371 (599)
T ss_dssp EEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEEC
T ss_pred EeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeec
Confidence 3332 21 1121 2222 467 46777889999999999999877544211000 000
Q ss_pred ---------------------CCeEEEEEccCCCEEEEEE---------------------------------------e
Q 016974 298 ---------------------PHVTSIAFSISGRLLFAGY---------------------------------------S 317 (379)
Q Consensus 298 ---------------------~~v~~~~fs~~g~~l~sg~---------------------------------------~ 317 (379)
.....++|+|+.+++++.. .
T Consensus 372 ~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~ 451 (599)
T 1w6s_A 372 PEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEG 451 (599)
T ss_dssp GGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBC
T ss_pred cccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCC
Confidence 0123567888877766542 2
Q ss_pred cCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 318 NGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 318 dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
+|.|+.||..+++.......-.....++ +...+..|+.++.|+.++.||...
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~-----~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGT-----MATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBC-----EEETTTEEEEECTTSEEEEEETTT
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcc-----eEecCCEEEEECCCCeEEEEECCC
Confidence 3678899998888765542110111111 123567788899999999998654
No 259
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.44 E-value=0.00035 Score=59.17 Aligned_cols=210 Identities=11% Similarity=0.149 Sum_probs=126.2
Q ss_pred eecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEE
Q 016974 153 MLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTAR 232 (379)
Q Consensus 153 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 232 (379)
.+.+-.+.+..++|.|+++.++++...++.|...|.. +.....+.. +-....-.+++.+ ++.++++.-.++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l----~g~~D~EGIa~~~-~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL----DFVKDLETIEYIG-DNQFVISDERDYAIY 94 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC----SSCSSEEEEEECS-TTEEEEEETTTTEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec----CCCCChHHeEEeC-CCEEEEEECCCCcEE
Confidence 4556666799999999876666777889999999987 554444321 1124566777775 556767666677888
Q ss_pred EEEccCCcc--ceEEEe------cccCCeeEEEEccCCCEEEEeeCCCeEEEEECC---CCceeEEEeec--cCCCCCCC
Q 016974 233 LWDTRVASR--AVRTFH------GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIR---TGHQLQVYYQQ--HGENEIPH 299 (379)
Q Consensus 233 vwd~~~~~~--~~~~~~------~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~---~~~~~~~~~~~--~~~~~~~~ 299 (379)
++++..... .+.... ..+.....++|+|.++.|.++.+.....||... ....+...... ........
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 888764432 112221 123346899999998877777765544555543 11122222110 01112335
Q ss_pred eEEEEEccCCC-EEEEEEecCcEEEEeCCCceEEEecccccCCc------cCceeEEEECCCCCeEEEeeCCCcEEEEe
Q 016974 300 VTSIAFSISGR-LLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSH------EGRITCLGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 300 v~~~~fs~~g~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h------~~~v~~~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
+..++|+|... +++.......|.++|.. ++....+ .+..+. -..-..|+|.++|+..++ |+-+.++.|.
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~-~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEM-SLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEE-ECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEE-EcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 78999999655 55555566788899965 4443332 111221 124588999999985554 6666555553
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.44 E-value=0.00072 Score=61.35 Aligned_cols=239 Identities=11% Similarity=0.007 Sum_probs=139.3
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEE-EeeCCCcEEEEEcCCCCCCCCCc
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVA-CGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
-.|.+..++ .+|+. +....|+..++........+ ........++|++.+..|. +-...+.|..++++...
T Consensus 79 ~~C~~~~~~-~~l~~-~~~~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~------ 149 (386)
T 3v65_B 79 RSCKALGPE-PVLLF-ANRIDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN------ 149 (386)
T ss_dssp SCEEECSSC-CEEEE-ECBSCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC------
T ss_pred CeECCcccc-ceeEe-ecCccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC------
Confidence 345554443 34433 34457888887655443333 3345578899997665554 44456778888776421
Q ss_pred ceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC
Q 016974 149 PVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD 228 (379)
Q Consensus 149 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 228 (379)
....+.........+++.+.++.++++-...+.|.+.++........+. ........+++.|.++.++.+-...
T Consensus 150 -~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-----~~l~~P~giavdp~~g~ly~td~~~ 223 (386)
T 3v65_B 150 -VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGN 223 (386)
T ss_dssp -EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEECSS
T ss_pred -cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-----CCCCCCcEEEEEcCCCeEEEeccCC
Confidence 1111111112234566766555666666777889888886544333331 2224467888888777777776655
Q ss_pred -CcEEEEEccCCccceEEEecccCCeeEEEEccCCCEE-EEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEc
Q 016974 229 -STARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRF-GTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFS 306 (379)
Q Consensus 229 -~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs 306 (379)
+.|...+.... .............+.++|+|++..| ++=+..+.|..+|+..... ..+.... ......+++
T Consensus 224 ~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~----~~~P~giav- 296 (386)
T 3v65_B 224 TPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG----LPHPFAITV- 296 (386)
T ss_dssp SCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSS----CSSEEEEEE-
T ss_pred CCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECC----CCCceEEEE-
Confidence 77888887532 2222222233457899999866555 4445677899999864332 2222211 234577888
Q ss_pred cCCCEEEEEEecCcEEEEeCCCce
Q 016974 307 ISGRLLFAGYSNGDCYVWDTLLAK 330 (379)
Q Consensus 307 ~~g~~l~sg~~dg~i~iwd~~~~~ 330 (379)
..+.++.+-...+.|..+|..+++
T Consensus 297 ~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 297 FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCEEEEeeCCCCeEEEEECCCCc
Confidence 345455555567789888854544
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=0.00091 Score=66.66 Aligned_cols=289 Identities=12% Similarity=0.061 Sum_probs=163.1
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEe--------------ecCCcceEEEEECCCCCEEEEeeCCCcE
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAI--------------KLPCAWVMTCAFSPTGQSVACGGLDSVC 133 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~--------------~~~~~~v~~~~~s~~g~~l~~~~~d~~i 133 (379)
..|.++...++|.+. .|+..+-|.++|..+++..... ......|.++...++|.+-+ |..++-+
T Consensus 258 ~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBSSCE
T ss_pred ceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecCCeE
Confidence 458888887777544 4566456888998765432211 12345688888888887544 4555567
Q ss_pred EEEEcCCCCCCCCCcceee----eecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCe
Q 016974 134 SIFNLNSPTDKDGNLPVSR----MLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADV 209 (379)
Q Consensus 134 ~iw~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 209 (379)
..++.....-. ...... ........|.++...+++ .|-.|+.++-+..||..++.... +... .......|
T Consensus 336 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~-~~~~-~~~~~~~v 409 (781)
T 3v9f_A 336 NFISNAPPTFH--TWSYSPTQMNESSLSNKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIY-NKEN-RELLSNSV 409 (781)
T ss_dssp EEECSSCCSCE--EEC----CCCSSCCSSSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEEC-C------CCCSBE
T ss_pred EEeCCCCCcce--eeccCccccccCCCCCcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEE-ccCC-CCCCCcce
Confidence 77765432100 000000 000123457777665543 46667767778889876543221 1100 01233567
Q ss_pred EEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEe---cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeE
Q 016974 210 LSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH---GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQ 286 (379)
Q Consensus 210 ~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~---~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~ 286 (379)
.++.... ++.+.+ |+.++.|..+|.... ....+. .....|.++...++|.+.+ |+. +-+..+|..+++...
T Consensus 410 ~~i~~d~-~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 410 LCSLKDS-EGNLWF-GTYLGNISYYNTRLK--KFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIH 483 (781)
T ss_dssp EEEEECT-TSCEEE-EETTEEEEEECSSSC--EEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCE
T ss_pred EEEEECC-CCCEEE-EeccCCEEEEcCCCC--cEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEe
Confidence 8887664 455554 666667888876533 122222 1235788998888886554 444 568889987765432
Q ss_pred EEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCc
Q 016974 287 VYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTN 366 (379)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~ 366 (379)
.............|.++..+++|.+.+ |+.++-|..||..+.+... +..........|.++...++|.+.++.. +|.
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTINQIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEE-ECTTTTCSCSCEEEEEECTTSCEEEEET-TEE
T ss_pred cccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEE-ccCCCCCCCCeeEEEEECCCCCEEEEEC-CCc
Confidence 221110011124689999999998655 5554458889876554332 2211112345789999999998777544 666
Q ss_pred EEEEecC
Q 016974 367 LKIWAFG 373 (379)
Q Consensus 367 i~vw~~~ 373 (379)
|..|+..
T Consensus 561 v~~~d~~ 567 (781)
T 3v9f_A 561 VCFPSAR 567 (781)
T ss_dssp EEESCTT
T ss_pred eEEECCC
Confidence 5767643
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.43 E-value=0.00026 Score=70.20 Aligned_cols=199 Identities=12% Similarity=0.044 Sum_probs=106.4
Q ss_pred cccc-cEEEEEee-CCCCeEEEEc-CC----CcEEEEECCCC-ceee-EeecCCcceEEEEECCCCCEEEEeeCCC----
Q 016974 65 GHAG-KVYSLDWT-SERNRIVSAS-QD----GRLIVWNALTS-QKTH-AIKLPCAWVMTCAFSPTGQSVACGGLDS---- 131 (379)
Q Consensus 65 gH~~-~v~~~~~~-~~~~~l~s~s-~D----~~v~iwd~~~~-~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~d~---- 131 (379)
+|.- .+...+|| |||++||-+. .+ .+|+++|+.++ +.+. .+.. ....++|+|||+.|+....|.
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCC
Confidence 3443 57789999 9999887432 22 35999999988 6321 1111 123578999999888877652
Q ss_pred -cEEEEEcCCCCCCCCCcceeeeec-ccccceEEEEEecCCCceEEEee--CCCeEEEeecCCCe-eE--EEecCccccC
Q 016974 132 -VCSIFNLNSPTDKDGNLPVSRMLS-GHKGYVSCCQYVPDEDTHLITSS--GDQTCVLWDITTGL-RT--SVFGGEFQSG 204 (379)
Q Consensus 132 -~i~iw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~--~d~~i~~wd~~~~~-~~--~~~~~~~~~~ 204 (379)
.|.++++.++.. .....+. ........+.|+|++..++++.. ....|.++|+.++. .. ..+. ..
T Consensus 247 ~~v~~~~lgt~~~-----~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~----~~ 317 (751)
T 2xe4_A 247 NKVWRHVMGKLQS-----EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR----PR 317 (751)
T ss_dssp EEEEEEETTSCGG-----GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS----CC
T ss_pred CEEEEEECCCCch-----hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee----cC
Confidence 466666654211 0011111 22234567889998754444443 23467788887652 11 2221 12
Q ss_pred CccCeEEEEEeCCCCcEEEEecCC--C--cEEEEEccCCccceEE-EecccC--CeeEEEEccCCCE-EEEeeCCCe--E
Q 016974 205 HTADVLSVSISGSNSRMFVSGSCD--S--TARLWDTRVASRAVRT-FHGHEG--DVNTVKFFPDGNR-FGTGSDDGT--C 274 (379)
Q Consensus 205 h~~~v~~~~~~~~~~~~l~sg~~d--~--~i~vwd~~~~~~~~~~-~~~h~~--~v~~v~~sp~g~~-l~s~s~D~~--i 274 (379)
......++.++. +..+++....+ + .|..+|+..... ... +..|.. .+..+.+ +++. +++...|+. |
T Consensus 318 ~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~-~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 318 EKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD-WSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRI 393 (751)
T ss_dssp CTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTC-CCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEE
T ss_pred CCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCccc-ceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEE
Confidence 233445555443 45555555544 3 455556542111 122 223433 3444444 4444 456667775 4
Q ss_pred EEEEC
Q 016974 275 RLFDI 279 (379)
Q Consensus 275 ~iwd~ 279 (379)
.++|+
T Consensus 394 ~~~dl 398 (751)
T 2xe4_A 394 WTMMA 398 (751)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 55565
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.41 E-value=0.00097 Score=59.56 Aligned_cols=241 Identities=12% Similarity=0.030 Sum_probs=140.6
Q ss_pred cccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEE-eeCCCcEEEEEcCCCCCCC
Q 016974 67 AGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVAC-GGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~d~~i~iw~~~~~~~~~ 145 (379)
.+...|.+..++. .|+.+ ....|+..++........+ ........++|++.+..|.- -...+.|..++++...
T Consensus 33 ~d~~~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~--- 106 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--- 106 (349)
T ss_dssp TTSSCEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred CCCCcccccccCc-eeEee-cccceEEEeCCCCeeEEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCC---
Confidence 3445566655543 44333 3455888887654433332 33345788999976665554 4456778888776422
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
..............+++.+.++.+.++-...+.|.+.++.......... ........++++|.++.++.+-
T Consensus 107 ----~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-----~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 107 ----VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp ----CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----TTCSCEEEEEEETTTTEEEEEE
T ss_pred ----ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-----CCCCCcceEEEecCcCeEEEec
Confidence 1111111112334567776555666666777889999886544333321 2223457888888777777777
Q ss_pred cCC-CcEEEEEccCCccceEEE-ecccCCeeEEEEccCCCEEE-EeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEE
Q 016974 226 SCD-STARLWDTRVASRAVRTF-HGHEGDVNTVKFFPDGNRFG-TGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTS 302 (379)
Q Consensus 226 ~~d-~~i~vwd~~~~~~~~~~~-~~h~~~v~~v~~sp~g~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 302 (379)
... +.|...++... ....+ .......+.++++|++..|. +-+..+.|..+|+..... ..+... .......
T Consensus 178 ~~~~~~I~r~~~dG~--~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~----~~~~P~g 250 (349)
T 3v64_C 178 WGNTPRIEASSMDGS--GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQ----GLPHPFA 250 (349)
T ss_dssp CSSSCEEEEEETTSC--SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS----SCSSEEE
T ss_pred cCCCCEEEEEeCCCC--CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeC----CCCCceE
Confidence 666 78888886532 22222 22234578999998666554 445677899999864332 222221 1234577
Q ss_pred EEEccCCCEEEEEEecCcEEEEeCCCce
Q 016974 303 IAFSISGRLLFAGYSNGDCYVWDTLLAK 330 (379)
Q Consensus 303 ~~fs~~g~~l~sg~~dg~i~iwd~~~~~ 330 (379)
+++ ..+.+..+-...+.|..++..+++
T Consensus 251 iav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 251 ITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 887 345455555567788888854443
No 264
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.40 E-value=0.00025 Score=59.91 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=116.3
Q ss_pred cceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecC
Q 016974 110 AWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDIT 189 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~ 189 (379)
.+...+.|+ ++.+..+.+.++.++++|+.+... .... +.. ..+.....+.++...+..-.++.+.+||..
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv-----~~~~-l~~---~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP-----VWME-RLG---NIFAEGLASDGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC-----SEEE-ECT---TCCEEEEEECSSCEEEEESSSCEEEEEETT
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE-----EeEE-CCC---CcceeEEEEeCCEEEEEEccCCEEEEEECC
Confidence 456778887 467778888889999999876431 1111 222 222222233455556666678999999999
Q ss_pred CCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEec--cc---CCeeEEEEccCCCE
Q 016974 190 TGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG--HE---GDVNTVKFFPDGNR 264 (379)
Q Consensus 190 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~--h~---~~v~~v~~sp~g~~ 264 (379)
+...+..+... ++ + ..++.. ...+++|- .++.|.++|..+. +.+..+.- +. ..++.+.|. +|..
T Consensus 125 Tl~~~~ti~~~---~e-G--wGLt~D--g~~L~vSd-Gs~~l~~iDp~T~-~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 125 PPQRERTTRYS---GE-G--WGLCYW--NGKLVRSD-GGTMLTFHEPDGF-ALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp TTEEEEEEECS---SC-C--CCEEEE--TTEEEEEC-SSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred cCcEEEEEeCC---Cc-e--eEEecC--CCEEEEEC-CCCEEEEEcCCCC-eEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 98877776431 22 1 233333 34555554 4889999998765 33443332 21 135677776 7866
Q ss_pred EEEeeCCCeEEEEECCCCceeEEEeecc--------CCCCCCCeEEEEEccCCCEEEEEE
Q 016974 265 FGTGSDDGTCRLFDIRTGHQLQVYYQQH--------GENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 265 l~s~s~D~~i~iwd~~~~~~~~~~~~~~--------~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
++..-.+..|.+.|.++++.+..+.... ........+.++|+|+++.|+..+
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 6666678899999999999887764321 111223578999999876555443
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.38 E-value=0.00044 Score=66.29 Aligned_cols=282 Identities=18% Similarity=0.140 Sum_probs=149.3
Q ss_pred CCeEEEEcCCCcEEEEECCCCceeeEeecCCcce---------EEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcc
Q 016974 79 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWV---------MTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLP 149 (379)
Q Consensus 79 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v---------~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 149 (379)
+..++.++.++.|..+|..+|+.+.++....... ...++ .+..++.++.|+.+.-+|..+.. ..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~-----~~ 140 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGK-----VV 140 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCC-----EE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCC-----EE
Confidence 3455556664459999999999988776542210 11111 35667778888888888876432 11
Q ss_pred eeeeeccccc--ceE-EEEEecC--CCc-eEEEee------CCCeEEEeecCCCeeEEEecCcc-c--------------
Q 016974 150 VSRMLSGHKG--YVS-CCQYVPD--EDT-HLITSS------GDQTCVLWDITTGLRTSVFGGEF-Q-------------- 202 (379)
Q Consensus 150 ~~~~~~~h~~--~v~-~~~~~~~--~~~-~l~s~~------~d~~i~~wd~~~~~~~~~~~~~~-~-------------- 202 (379)
.......+.. .+. .-....+ ++. .++.++ .++.|.-+|..+|...-.....- .
T Consensus 141 W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~ 220 (582)
T 1flg_A 141 WKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGD 220 (582)
T ss_dssp EEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSC
T ss_pred eeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccc
Confidence 1111111100 010 0011111 111 455544 37899999999886543321100 0
Q ss_pred c---------------------CCccCeEEEEEeCCCCcEEEEec------------C-------C----CcEEEEEccC
Q 016974 203 S---------------------GHTADVLSVSISGSNSRMFVSGS------------C-------D----STARLWDTRV 238 (379)
Q Consensus 203 ~---------------------~h~~~v~~~~~~~~~~~~l~sg~------------~-------d----~~i~vwd~~~ 238 (379)
. +....-...++.+..+.+++..+ . | +.|.-+|..+
T Consensus 221 ~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~T 300 (582)
T 1flg_A 221 VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS 300 (582)
T ss_dssp TTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTT
T ss_pred cccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCC
Confidence 0 00000012344443343333222 1 2 5788888876
Q ss_pred CccceEEEe--ccc--------CCeeEEEEc-cCCC---EEEEeeCCCeEEEEECCCCceeEEEeeccCC----------
Q 016974 239 ASRAVRTFH--GHE--------GDVNTVKFF-PDGN---RFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE---------- 294 (379)
Q Consensus 239 ~~~~~~~~~--~h~--------~~v~~v~~s-p~g~---~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~---------- 294 (379)
.+ .+-.++ .|. .++. +... .+|+ .++.++.+|.+.++|..+|+.+-.+......
T Consensus 301 G~-~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~ 378 (582)
T 1flg_A 301 GE-VKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKT 378 (582)
T ss_dssp CC-EEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTT
T ss_pred CC-EEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccC
Confidence 53 333333 232 1121 1221 4674 6888999999999999999877544221100
Q ss_pred -------------------CCC-----------CCeEEEEEccCCCEEEEEE----------------------------
Q 016974 295 -------------------NEI-----------PHVTSIAFSISGRLLFAGY---------------------------- 316 (379)
Q Consensus 295 -------------------~~~-----------~~v~~~~fs~~g~~l~sg~---------------------------- 316 (379)
... .....++|+|+...+++..
T Consensus 379 g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 458 (582)
T 1flg_A 379 GRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIK 458 (582)
T ss_dssp CCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred CCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeec
Confidence 000 0012467788766665543
Q ss_pred -----ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 317 -----SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 317 -----~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
.+|.|+.||..+++.............+++ ...+..++.|+.|+.++.||...
T Consensus 459 p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~-----~tagglvf~g~~dg~l~A~D~~t 516 (582)
T 1flg_A 459 RMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVL-----ATAGNLVFTGTGDGYFKAFDAKS 516 (582)
T ss_dssp ESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCE-----EETTTEEEEECTTSEEEEEETTT
T ss_pred CCCCCCcceEEEEECCCCCEEEEecCCCCCcccce-----EeCCCEEEEECCCCcEEEEECCC
Confidence 257899999999887655421111111221 12467888899999999999653
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.38 E-value=0.00068 Score=57.34 Aligned_cols=211 Identities=11% Similarity=0.121 Sum_probs=132.0
Q ss_pred eccccccccEEEEEeeCCCCeEEE-EcCCCcEEEEECCCCceeeEeecC-CcceEEEEECCCCCEEEEeeCCCcEEEEEc
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVS-ASQDGRLIVWNALTSQKTHAIKLP-CAWVMTCAFSPTGQSVACGGLDSVCSIFNL 138 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s-~s~D~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 138 (379)
+.+.|=.+.+..++|+|+++.|++ ...++.|...|.. ++.+..+... ....-.+++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 356676678999999998776654 6678889999987 8877777543 244667888899987777656778888888
Q ss_pred CCCCCCCCCcceeeee------cccccceEEEEEecCCCceEEEeeCCC-eEEEeec-CCCeeEEEecCc-c-ccCCccC
Q 016974 139 NSPTDKDGNLPVSRML------SGHKGYVSCCQYVPDEDTHLITSSGDQ-TCVLWDI-TTGLRTSVFGGE-F-QSGHTAD 208 (379)
Q Consensus 139 ~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~s~~~d~-~i~~wd~-~~~~~~~~~~~~-~-~~~h~~~ 208 (379)
..... ....... ...+...-.++|.|.++.++++.-.+. .|..|+- ............ + ...+...
T Consensus 99 ~~~~~----i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 99 TPNSE----VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp CTTCC----EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred CCCCe----eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 65331 1111111 112344678999998655444443333 4444441 011111111100 0 1123345
Q ss_pred eEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEeccc---------CCeeEEEEccCCCEEEEeeCCCeEEEEEC
Q 016974 209 VLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHE---------GDVNTVKFFPDGNRFGTGSDDGTCRLFDI 279 (379)
Q Consensus 209 v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~---------~~v~~v~~sp~g~~l~s~s~D~~i~iwd~ 279 (379)
+.+++++|..+.+++.....+.|-.+|... +.+..+.-.. ..-..|+|.|+|+.+++ |+-+.+..|.-
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 788999999999999988899999999763 3333332111 24578999999985555 77777766653
No 267
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.35 E-value=0.00072 Score=56.48 Aligned_cols=190 Identities=14% Similarity=0.138 Sum_probs=114.0
Q ss_pred ccccc--EEEEEeeCCCCeEEEEcCCC--cEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCC
Q 016974 65 GHAGK--VYSLDWTSERNRIVSASQDG--RLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 140 (379)
Q Consensus 65 gH~~~--v~~~~~~~~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~ 140 (379)
.|... ...+.|+. +.++.|.+.+| .|+..|+.+++.+..+...... ...
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fge------------------------- 68 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGA------------------------- 68 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEE-------------------------
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-cee-------------------------
Confidence 45443 55888986 56667777754 8999999999877766543210 000
Q ss_pred CCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCc
Q 016974 141 PTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 141 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 220 (379)
.+.. .++...+..-.++.+.+||..+......+... + .+ ..++. .+..
T Consensus 69 ----------------------Gi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~---~-~G--wglt~--dg~~ 116 (243)
T 3mbr_X 69 ----------------------GIVA--WRDRLIQLTWRNHEGFVYDLATLTPRARFRYP---G-EG--WALTS--DDSH 116 (243)
T ss_dssp ----------------------EEEE--ETTEEEEEESSSSEEEEEETTTTEEEEEEECS---S-CC--CEEEE--CSSC
T ss_pred ----------------------EEEE--eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC---C-Cc--eEEee--CCCE
Confidence 0111 12233333445667777887777666555321 1 11 23332 2455
Q ss_pred EEEEecCCCcEEEEEccCCccceEEEec--cc---CCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC--
Q 016974 221 MFVSGSCDSTARLWDTRVASRAVRTFHG--HE---GDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG-- 293 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~~~~~~~~--h~---~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~-- 293 (379)
+++|-+ ++.|.++|..+. +.+..+.- +. ..++.+.+. +|..++..-.+..|.+.|.++++.+..+.....
T Consensus 117 L~vSdg-s~~l~~iDp~t~-~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~ 193 (243)
T 3mbr_X 117 LYMSDG-TAVIRKLDPDTL-QQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVP 193 (243)
T ss_dssp EEEECS-SSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGST
T ss_pred EEEECC-CCeEEEEeCCCC-eEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcc
Confidence 666654 778999998765 33333332 11 245666765 777666665788999999999998877653311
Q ss_pred ------CCCCCCeEEEEEccCCCEEEEEE
Q 016974 294 ------ENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 294 ------~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
.......+.++++|+++.|+..+
T Consensus 194 ~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 194 DADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 11223578999999887666554
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=0.00067 Score=62.51 Aligned_cols=243 Identities=12% Similarity=0.077 Sum_probs=134.7
Q ss_pred EEEEEeeC-CCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC-C----cEEEEEcCCCCC
Q 016974 70 VYSLDWTS-ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD-S----VCSIFNLNSPTD 143 (379)
Q Consensus 70 v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~----~i~iw~~~~~~~ 143 (379)
...|+++| ++..|+.+...+.|+.+|...++.. .+.........++|+++|+.|..+... + .+...+...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g--- 214 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES--- 214 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG---
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC---
Confidence 46788997 4555666555588999998765433 333344567889999999966665542 1 222233221
Q ss_pred CCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEE
Q 016974 144 KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFV 223 (379)
Q Consensus 144 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 223 (379)
.......+.. ......+++.|+++.++++-..++.|..++...+....... .+.......+++++....+++
T Consensus 215 ---~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~----~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 215 ---GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT----IQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp ---TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE----CSSSSCCEEEEECTTSSEEEE
T ss_pred ---ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE----cCCCCcceeEEEcCCCCEEEE
Confidence 1111111111 12234567888555666666677899999987665422221 111234567888875444777
Q ss_pred EecCCCcEEEEEccCCc-c--ceEEEecc---------------cCCee-EEEEc--------cCCCEEEEeeCCCeEEE
Q 016974 224 SGSCDSTARLWDTRVAS-R--AVRTFHGH---------------EGDVN-TVKFF--------PDGNRFGTGSDDGTCRL 276 (379)
Q Consensus 224 sg~~d~~i~vwd~~~~~-~--~~~~~~~h---------------~~~v~-~v~~s--------p~g~~l~s~s~D~~i~i 276 (379)
+-...+.|..++..... . ....+.+. -.... .++.. ++|.++++=...+.|+.
T Consensus 287 ~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~ 366 (430)
T 3tc9_A 287 VVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRI 366 (430)
T ss_dssp EETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEE
T ss_pred EECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEE
Confidence 77788899998865221 1 01222221 01122 45543 34666666666778888
Q ss_pred EECCCCceeEEEeecc-----C--C------CCCCCeEEEEEccCCCEEEEE-EecCcEEEEeC
Q 016974 277 FDIRTGHQLQVYYQQH-----G--E------NEIPHVTSIAFSISGRLLFAG-YSNGDCYVWDT 326 (379)
Q Consensus 277 wd~~~~~~~~~~~~~~-----~--~------~~~~~v~~~~fs~~g~~l~sg-~~dg~i~iwd~ 326 (379)
++. ++. +..+.... + . ........++++|++..|+.+ ..+..|+.++.
T Consensus 367 i~~-~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 367 LTP-QGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp ECT-TSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ECC-CCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 883 453 33332210 0 0 012246889999954444444 45566776653
No 269
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.33 E-value=0.0022 Score=66.22 Aligned_cols=283 Identities=15% Similarity=0.117 Sum_probs=148.9
Q ss_pred cccEEEEEeeCC------CCeEEEEcC-CCcEEEEECCCCceeeEeecCC-cceEE---EEECCCCCEEEEeeCCCcEEE
Q 016974 67 AGKVYSLDWTSE------RNRIVSASQ-DGRLIVWNALTSQKTHAIKLPC-AWVMT---CAFSPTGQSVACGGLDSVCSI 135 (379)
Q Consensus 67 ~~~v~~~~~~~~------~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~~~-~~v~~---~~~s~~g~~l~~~~~d~~i~i 135 (379)
...|.|+++.|. +++++.|.. |++|+|+++.+-+.+....+.. ....+ +.+ ....+|.+|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEEE
Confidence 347999998763 368888986 9999999998766665544432 12222 233 23468889999999877
Q ss_pred EEcCCCCCCCCCcceee-eecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE
Q 016974 136 FNLNSPTDKDGNLPVSR-MLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI 214 (379)
Q Consensus 136 w~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
+.++.. .+...-.+ ..-| ..++.-..+...+...++..+ ++...++.-........+ ....+..++.
T Consensus 632 ~~~d~~---tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l-------~~~~v~~~~~ 699 (1158)
T 3ei3_A 632 FGLNIE---TGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNV-------NLKEVNYMCP 699 (1158)
T ss_dssp EEECTT---TCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESSSSEEEEEB-------SSSCCCEEEE
T ss_pred EEEcCC---CCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcCCceEEecc-------ChHHhceEec
Confidence 777642 22222221 1223 234433333333222233333 444444432222111111 1112323322
Q ss_pred eCCC--CcEEEEecCCCcEEEEEccCCcc-ceEEEecccCCeeEEEEccCCCEEEEeeCC--------------------
Q 016974 215 SGSN--SRMFVSGSCDSTARLWDTRVASR-AVRTFHGHEGDVNTVKFFPDGNRFGTGSDD-------------------- 271 (379)
Q Consensus 215 ~~~~--~~~l~sg~~d~~i~vwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D-------------------- 271 (379)
..+. ..-++ +..++.++|..+....+ .++.+. -...+..++++|..+.++.+..+
T Consensus 700 F~se~~~~g~v-~~~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1158)
T 3ei3_A 700 LNSDGYPDSLA-LANNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQ 777 (1158)
T ss_dssp ECCSSSTTEEE-EECSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHH
T ss_pred cCcccCCCcEE-EEcCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhh
Confidence 2111 12233 23345688887653322 222222 23457778888876655443311
Q ss_pred -----------------------------CeEEEEECCCCceeEEEeeccCCCCCCCeEEE---EEccC-CCEEEEEE--
Q 016974 272 -----------------------------GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSI---AFSIS-GRLLFAGY-- 316 (379)
Q Consensus 272 -----------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~---~fs~~-g~~l~sg~-- 316 (379)
+.|++.|..+.+.+..+.-. .+ ..+.++ .|..+ ..+|+.|.
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~--~n--E~~~sv~~v~~~~~~~~~lvVGTa~ 853 (1158)
T 3ei3_A 778 ALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL--QN--EYALSLVSCKLGKDPNTYFIVGTAM 853 (1158)
T ss_dssp CSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECC--TT--EEEEEEEEECCTTCCCCEEEEEEEE
T ss_pred hhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCC--CC--cceEEEEEEEEccCCCEEEEEEeee
Confidence 24677777776665444221 11 224444 34433 46899887
Q ss_pred --------ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCc
Q 016974 317 --------SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 317 --------~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
..|.|++|++...+...... ....++|++++-- +|.+||+ ..++|++|+++.
T Consensus 854 ~~~~e~~~~~Gri~vf~v~~~kL~lv~~---~~v~g~v~al~~~-~g~Lla~--ig~~l~vy~l~~ 913 (1158)
T 3ei3_A 854 VYPEEAEPKQGRIVVFQYSDGKLQTVAE---KEVKGAVYSMVEF-NGKLLAS--INSTVRLYEWTT 913 (1158)
T ss_dssp CCTTCSSCCCEEEEEEEEETTEEEEEEE---EEESSCEEEEEEE-TTEEEEE--ETTEEEEEEECT
T ss_pred cCCCCCCCCceEEEEEEEECCEEEEEEE---EEcCCcCEEEeee-CCEEEEE--cCCEEEEEECCC
Confidence 34789999986544332221 2346789988733 4544443 458999999986
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.29 E-value=0.0016 Score=60.06 Aligned_cols=245 Identities=11% Similarity=0.083 Sum_probs=135.9
Q ss_pred EEEEEeeCC--CCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCC--CcEEEEEcCCCCCCC
Q 016974 70 VYSLDWTSE--RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLD--SVCSIFNLNSPTDKD 145 (379)
Q Consensus 70 v~~~~~~~~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d--~~i~iw~~~~~~~~~ 145 (379)
...|+|.|+ ...|+.+...+.|+.+|..+++.... .........++|+++|+++++-... ....++.+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~---- 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA---- 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG----
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC----
Confidence 568899984 44555554448999999876654433 3344557899999999954443321 11122222211
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCee-EEEecCccccCCccCeEEEEEeCCCCcEEEE
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLR-TSVFGGEFQSGHTADVLSVSISGSNSRMFVS 224 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 224 (379)
+.......+. .-.....+++.|+++.+.++-..++.|..+|..++.. ...+. .+....-..+++++....++++
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~----~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM----MDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE----CSCCSSCEEEEECTTSSEEEEE
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec----cCCCCCcccEEEeCCCCEEEEE
Confidence 0110001111 1122334677775455555666778899999876654 22221 1112223468888755447777
Q ss_pred ecCCCcEEEEEccCCcc---ceEEEecc---------------cCCeeEEEE---------ccCCCEEEEeeCCCeEEEE
Q 016974 225 GSCDSTARLWDTRVASR---AVRTFHGH---------------EGDVNTVKF---------FPDGNRFGTGSDDGTCRLF 277 (379)
Q Consensus 225 g~~d~~i~vwd~~~~~~---~~~~~~~h---------------~~~v~~v~~---------sp~g~~l~s~s~D~~i~iw 277 (379)
-...+.|+.++...... ....+.+. -.....+++ .++|.++++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 77888999988652111 11222221 123567899 7778777777778899999
Q ss_pred ECCCCceeEEEeeccC-------------CCCCCCeEEEEEc-cCCCEEEEEEecCcEEEEeC
Q 016974 278 DIRTGHQLQVYYQQHG-------------ENEIPHVTSIAFS-ISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 278 d~~~~~~~~~~~~~~~-------------~~~~~~v~~~~fs-~~g~~l~sg~~dg~i~iwd~ 326 (379)
+. ++. +..+..... .........++++ ++|.++++=..+..|+.++.
T Consensus 371 ~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 371 TP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 85 453 333332111 0012236788998 55554444445566776653
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.27 E-value=0.001 Score=60.30 Aligned_cols=207 Identities=12% Similarity=-0.011 Sum_probs=126.2
Q ss_pred cEEEEEeeCCCCe-EEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCE-EEEeeCCCcEEEEEcCCCCCCCC
Q 016974 69 KVYSLDWTSERNR-IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQS-VACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 69 ~v~~~~~~~~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
....++|.+.++. +++-...+.|+.++...+.....+.........+++.+.+.. ..+-...+.|.+.+++...
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~---- 192 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---- 192 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS----
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc----
Confidence 4678999975554 455566788999998765443333333334566788875554 4555556777777665321
Q ss_pred CcceeeeecccccceEEEEEecCCCceEEEeeCC-CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 147 NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 147 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
.. ..+.........+++.|.++.++.+-... +.|...++.......... ........+++++.++.++++-
T Consensus 193 --~~-~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 193 --RK-VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-----THLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp --CE-EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEEGGGTEEEEEE
T ss_pred --eE-EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-----CCCCCeeeEEEeCCCCEEEEEE
Confidence 11 11222223457788888766555554444 678888876443332221 1223457888987778888888
Q ss_pred cCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEe
Q 016974 226 SCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYY 289 (379)
Q Consensus 226 ~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~ 289 (379)
+..+.|..+|+... .....+.........+++ ..+..+++-...+.|..+|..+++.+..+.
T Consensus 265 ~~~~~I~~~d~dG~-~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 265 AKHHVIERANLDGS-HRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTTTEEEEECTTSC-SCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCEEEEEeCCCC-eeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 88889999987633 222223333445677888 445566666777889999866676555543
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.26 E-value=0.0021 Score=57.38 Aligned_cols=206 Identities=12% Similarity=-0.005 Sum_probs=127.3
Q ss_pred cEEEEEeeCCCCeE-EEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCC-EEEEeeCCCcEEEEEcCCCCCCCC
Q 016974 69 KVYSLDWTSERNRI-VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQ-SVACGGLDSVCSIFNLNSPTDKDG 146 (379)
Q Consensus 69 ~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~~~~~ 146 (379)
....++|.+..+.| ++-...+.|..++...+.....+.........+++.+.+. +..+-...+.|.+.+++...
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---- 149 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---- 149 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS----
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc----
Confidence 36789999765554 4556678899999876554333333334456788887554 44555567788888876421
Q ss_pred CcceeeeecccccceEEEEEecCCCceEEEeeCC-CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 147 NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 147 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
. ...+...-.....+++.|.++.++.+-... +.|...++......... .........+++++.++.++.+-
T Consensus 150 --~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-----~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 150 --R-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-----DTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp --C-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC-----CSSCSCEEEEEEETTTTEEEEEE
T ss_pred --e-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE-----ECCCCCcceEEEeCCCCEEEEEE
Confidence 1 111222223457788888766555555555 77888887543322221 11223467889998788888888
Q ss_pred cCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 226 SCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 226 ~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
...+.|..+|+... .....+.........+++ ..+..+++-...+.|..+|..+++.+..+
T Consensus 222 ~~~~~I~~~~~dG~-~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 222 AKHHVIERANLDGS-HRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTTTEEEEEETTSC-SCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCEEEEEeCCCC-ceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 88889999997633 222223333445677888 34555666667788888886666655444
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.25 E-value=0.00087 Score=64.31 Aligned_cols=82 Identities=13% Similarity=0.148 Sum_probs=50.4
Q ss_pred CCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEE
Q 016974 270 DDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCL 349 (379)
Q Consensus 270 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 349 (379)
.+|.+.-||+.+++.+-....... ...-.+...|.+++.|+.||.++.||..+++.+.....-......++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~------~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~--- 521 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFA------VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPM--- 521 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC------CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE---
T ss_pred CcCeEEEEECCCCCEEeEecCCCC------ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccE---
Confidence 357899999999987654432111 11111234677888899999999999999998766532111222333
Q ss_pred EECCCCC-eEEE
Q 016974 350 GLSADGS-ALCT 360 (379)
Q Consensus 350 ~~s~d~~-~l~s 360 (379)
.+..+|+ ++++
T Consensus 522 ~y~~~G~qyv~~ 533 (599)
T 1w6s_A 522 TYTHKGTQYVAI 533 (599)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEeCCEEEEEE
Confidence 3455775 4444
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=0.0016 Score=59.99 Aligned_cols=246 Identities=10% Similarity=0.094 Sum_probs=130.9
Q ss_pred eEEEEECC-CCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC----eEEEe
Q 016974 112 VMTCAFSP-TGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ----TCVLW 186 (379)
Q Consensus 112 v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~----~i~~w 186 (379)
...++++| ++..|..+...+.|..+|+.... + ..+.........+++.+++..++++....+ .+...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-------v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-------V-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTE-------E-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCE-------E-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 45788898 45556555555677777765321 1 112222344677899887653444443222 23333
Q ss_pred ecCCCee-EEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEe-cccCCeeEEEEccCCCE
Q 016974 187 DITTGLR-TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFH-GHEGDVNTVKFFPDGNR 264 (379)
Q Consensus 187 d~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~ 264 (379)
+...... ...+. .......+++++.++.++++-..++.|..++.... ....... +.......++|+|+|++
T Consensus 211 ~~~g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~-~~~~~~~~~~~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 211 TRESGFKVITELT------KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ-ETTPLFTIQDSGWEFHIQFHPSGNY 283 (430)
T ss_dssp EGGGTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT-EEEEEEECSSSSCCEEEEECTTSSE
T ss_pred eCCCceeeeeeec------cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-cEEEEEEcCCCCcceeEEEcCCCCE
Confidence 3322111 01111 11223456677757778888777889999997643 2111111 12234678999999994
Q ss_pred -EEEeeCCCeEEEEECCC--Cce--eEEEeeccCC----------CCCCCeE-EEEEc--------cCCCEEEEEEecCc
Q 016974 265 -FGTGSDDGTCRLFDIRT--GHQ--LQVYYQQHGE----------NEIPHVT-SIAFS--------ISGRLLFAGYSNGD 320 (379)
Q Consensus 265 -l~s~s~D~~i~iwd~~~--~~~--~~~~~~~~~~----------~~~~~v~-~~~fs--------~~g~~l~sg~~dg~ 320 (379)
+++-...+.|..++... +.. +..+....+. ....... .++.. ++|.+.++=..++.
T Consensus 284 lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~ 363 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC 363 (430)
T ss_dssp EEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE
T ss_pred EEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE
Confidence 45556778899987653 211 1222221000 0011223 45553 34555555556678
Q ss_pred EEEEeCCCceEEEecccc---cCC----------ccCceeEEEECCC-CCeEEEeeCCCcEEEEecC
Q 016974 321 CYVWDTLLAKVVLNLGSL---QNS----------HEGRITCLGLSAD-GSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 321 i~iwd~~~~~~~~~~~~~---~~~----------h~~~v~~~~~s~d-~~~l~s~s~D~~i~vw~~~ 373 (379)
|+.++. .+......+.- ..+ .-..-..|+++|+ +.++++-.....|+.++..
T Consensus 364 I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 364 IRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 999883 45443332210 001 0124678999995 5555555556778887754
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.22 E-value=0.0019 Score=61.87 Aligned_cols=81 Identities=17% Similarity=0.208 Sum_probs=50.7
Q ss_pred CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEE
Q 016974 271 DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLG 350 (379)
Q Consensus 271 D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 350 (379)
++.|.-||+.+++.+-...... . +..-.....|.+++.|+.||.++.||..+++.+.....-......+ +.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~-----~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P---~~ 535 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-P-----LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP---IT 535 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-C-----CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EE
T ss_pred cceEEEEECCCCCEEEEecCCC-C-----CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCc---eE
Confidence 6889999999998765443221 1 1111122356788889999999999999999887653211111222 34
Q ss_pred ECCCCC-eEEE
Q 016974 351 LSADGS-ALCT 360 (379)
Q Consensus 351 ~s~d~~-~l~s 360 (379)
+..+|+ ++++
T Consensus 536 y~~~G~qYv~~ 546 (582)
T 1flg_A 536 WEQDGEQYLGV 546 (582)
T ss_dssp EEETTEEEEEE
T ss_pred EEECCEEEEEE
Confidence 556776 4444
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.21 E-value=0.00021 Score=69.78 Aligned_cols=244 Identities=12% Similarity=0.126 Sum_probs=125.8
Q ss_pred EEEECC-CCCEEEEeeCCC-----------cEEEEEcCCCCCCCCCcceeeee-cccccceEEEEEecCCCceEEEee-C
Q 016974 114 TCAFSP-TGQSVACGGLDS-----------VCSIFNLNSPTDKDGNLPVSRML-SGHKGYVSCCQYVPDEDTHLITSS-G 179 (379)
Q Consensus 114 ~~~~s~-~g~~l~~~~~d~-----------~i~iw~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~-~ 179 (379)
.+++.| +|+.++.||.+. .+.+||..... +.....+ ..+.....++++.+++ ..++.|+ .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-----w~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-----VSDRTVTVTKHDMFCPGISMDGNG-QIVVTGGND 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-----BCCCEEEECSCCCSSCEEEECTTS-CEEEECSSS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-----EEeCcccCCCCCCccccccCCCCC-CEEEeCCCC
Confidence 456667 888888887643 46777766432 1111111 2233333345566654 5677776 4
Q ss_pred CCeEEEeecCCCeeEEEecCccccCCccC-eEEEEEeCCCCcEEEEec-CC-----CcEEEEEccCCccceEEEec----
Q 016974 180 DQTCVLWDITTGLRTSVFGGEFQSGHTAD-VLSVSISGSNSRMFVSGS-CD-----STARLWDTRVASRAVRTFHG---- 248 (379)
Q Consensus 180 d~~i~~wd~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~sg~-~d-----~~i~vwd~~~~~~~~~~~~~---- 248 (379)
+..+.+||..+........ .+... -.++... .++++++.|+ .+ ..+.+||..... -..+..
T Consensus 264 ~~~v~~yd~~t~~W~~~~~-----~~~~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~--W~~~~~~~~~ 335 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPD-----MQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVN 335 (656)
T ss_dssp TTCEEEEEGGGTEEEECCC-----CSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSG
T ss_pred CCceEEecCcCCceeECCC-----CCccccccceEEe-cCCeEEEEeCcccCCcccccceEeCCCCCc--ceeCCCcccc
Confidence 5689999998765433211 11111 1223333 2667888888 44 568999976431 111110
Q ss_pred -ccCCeeEEEEccCCCEEEEeeCCC---------eEEEEECCCCceeEEEeeccC----CCCCCCeEEEEEcc-CCCEEE
Q 016974 249 -HEGDVNTVKFFPDGNRFGTGSDDG---------TCRLFDIRTGHQLQVYYQQHG----ENEIPHVTSIAFSI-SGRLLF 313 (379)
Q Consensus 249 -h~~~v~~v~~sp~g~~l~s~s~D~---------~i~iwd~~~~~~~~~~~~~~~----~~~~~~v~~~~fs~-~g~~l~ 313 (379)
....-....+..++..++.|+.|+ .+..||..+..-......... ......-.++.|.. ++++++
T Consensus 336 p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 336 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 000000011223455555554443 567888877653322111000 00001124555543 778888
Q ss_pred EEEecC-----------cEEEEeCCCceEEEec-ccccCCccCce-eEEEECCCCCeEEEeeCC-----------CcEEE
Q 016974 314 AGYSNG-----------DCYVWDTLLAKVVLNL-GSLQNSHEGRI-TCLGLSADGSALCTGSWD-----------TNLKI 369 (379)
Q Consensus 314 sg~~dg-----------~i~iwd~~~~~~~~~~-~~~~~~h~~~v-~~~~~s~d~~~l~s~s~D-----------~~i~v 369 (379)
.|+.++ .|.+||..+..-.... ..+ +.... -+++..|+|++++.|+.+ ..+.+
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m---p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ 492 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL---YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEI 492 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC---SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEE
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC---CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEE
Confidence 887543 6778887665433221 111 11122 234566899999999865 46788
Q ss_pred EecCc
Q 016974 370 WAFGG 374 (379)
Q Consensus 370 w~~~~ 374 (379)
||...
T Consensus 493 ydp~t 497 (656)
T 1k3i_A 493 YVPEQ 497 (656)
T ss_dssp EEGGG
T ss_pred EcCCC
Confidence 88654
No 277
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.008 Score=59.80 Aligned_cols=284 Identities=11% Similarity=0.030 Sum_probs=162.6
Q ss_pred cccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEe---------ecCCcceEEEEECCCCCEEEEeeCCCcEEEEE
Q 016974 67 AGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAI---------KLPCAWVMTCAFSPTGQSVACGGLDSVCSIFN 137 (379)
Q Consensus 67 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~---------~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~ 137 (379)
...|.++...++|.+ -.|+.++-|..++..++....-. ......|.++...++|.+.+ |..++-+..|+
T Consensus 312 ~~~v~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNNI-WIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWI-GTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCCE-EEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEE-EEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCCE-EEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEE-EeCCCcEEEEE
Confidence 356899988887764 45676777999987655432211 11335688888888887554 44445577777
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
....... ............|.++...+++ .|-.|+.++.+..+|..++.... +... ......|.++...+
T Consensus 390 ~~~~~~~----~~~~~~~~~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~-~~~~--~~~~~~v~~i~~d~- 459 (781)
T 3v9f_A 390 NGKRVAI----YNKENRELLSNSVLCSLKDSEG--NLWFGTYLGNISYYNTRLKKFQI-IELE--KNELLDVRVFYEDK- 459 (781)
T ss_dssp TTEEEEE----CC-----CCCSBEEEEEECTTS--CEEEEETTEEEEEECSSSCEEEE-CCST--TTCCCCEEEEEECT-
T ss_pred CCCCeEE----EccCCCCCCCcceEEEEECCCC--CEEEEeccCCEEEEcCCCCcEEE-eccC--CCCCCeEEEEEECC-
Confidence 5421100 0000001123567777665443 46667777788899987764322 2110 11335678877664
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecc-----cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeecc
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGH-----EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 292 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h-----~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 292 (379)
++.+.+ |+. +.|..+|..... ........ ...|.++...++|.+.+ |+.++-+..||..+++ ...+....
T Consensus 460 ~g~lwi-gt~-~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~-~~~~~~~~ 534 (781)
T 3v9f_A 460 NKKIWI-GTH-AGVFVIDLASKK-VIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQL-VRKFNQYE 534 (781)
T ss_dssp TSEEEE-EET-TEEEEEESSSSS-CCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCE-EEEECTTT
T ss_pred CCCEEE-EEC-CceEEEeCCCCe-EEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCe-EEEccCCC
Confidence 555555 444 568888876432 22211111 35789999998887655 4443447778876653 33332211
Q ss_pred CCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEec
Q 016974 293 GENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAF 372 (379)
Q Consensus 293 ~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~ 372 (379)
+. ....|.++..+++|.+.+ |+.+|-|..||..+.+.. .+.....-....|.++...++|.+.+++ .+| |..|+.
T Consensus 535 ~l-~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~ 609 (781)
T 3v9f_A 535 GF-CSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYIT 609 (781)
T ss_dssp TC-SCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEET
T ss_pred CC-CCCeeEEEEECCCCCEEE-EECCCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEEC
Confidence 11 234589999999998655 444665488987655432 2211111123467888888888877754 445 444544
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.06 E-value=0.0068 Score=55.77 Aligned_cols=245 Identities=10% Similarity=0.095 Sum_probs=132.1
Q ss_pred eEEEEECCC--CCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC---C-eEEE
Q 016974 112 VMTCAFSPT--GQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD---Q-TCVL 185 (379)
Q Consensus 112 v~~~~~s~~--g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~-~i~~ 185 (379)
...++++|+ +..|..+...+.|+.++..... ...+.+.......+++.+++. ++++-... . .+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~--------v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY--------VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTE--------EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCE--------EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 457889984 3344444433778888764321 112222334567889998865 44443311 1 2333
Q ss_pred eecCCCee-EEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEE-e-cccCCeeEEEEccCC
Q 016974 186 WDITTGLR-TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTF-H-GHEGDVNTVKFFPDG 262 (379)
Q Consensus 186 wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~-~-~h~~~v~~v~~sp~g 262 (379)
.+...+.. ...+ ........+++++.++.++++-..++.|+.+|.... .....+ . +....-..++|+|+|
T Consensus 212 ~~~~~~~~~~~~~------~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g-~~~~~~~~~~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 212 FTRASGFTERLSL------CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG-TLTEEEVMMDTKGSNFHIVWHPTG 284 (433)
T ss_dssp ECGGGTTCCEEEE------EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC-CEEEEEEECSCCSSCEEEEECTTS
T ss_pred EECCCCeeccccc------cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC-eEEEEEeccCCCCCcccEEEeCCC
Confidence 33222111 0011 011223456677656777777777888999887633 221122 1 112233469999999
Q ss_pred CE-EEEeeCCCeEEEEECC--CCce--eEEEeeccCC----------CCCCCeEEEEE---------ccCCCEEEEEEec
Q 016974 263 NR-FGTGSDDGTCRLFDIR--TGHQ--LQVYYQQHGE----------NEIPHVTSIAF---------SISGRLLFAGYSN 318 (379)
Q Consensus 263 ~~-l~s~s~D~~i~iwd~~--~~~~--~~~~~~~~~~----------~~~~~v~~~~f---------s~~g~~l~sg~~d 318 (379)
++ +++-...+.|..++.. ++.. ...+....+. ........++| .++|.+.++-..+
T Consensus 285 ~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n 364 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS 364 (433)
T ss_dssp SEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC
Confidence 84 4555667889998864 2221 1122221010 01223577999 7777766665667
Q ss_pred CcEEEEeCCCceEEEeccccc---CC----------ccCceeEEEEC-CCCCeEEEeeCCCcEEEEecC
Q 016974 319 GDCYVWDTLLAKVVLNLGSLQ---NS----------HEGRITCLGLS-ADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 319 g~i~iwd~~~~~~~~~~~~~~---~~----------h~~~v~~~~~s-~d~~~l~s~s~D~~i~vw~~~ 373 (379)
+.|+.++. .+......+.-. .+ .-.....|+++ ++|.++++=...+.|+.+++.
T Consensus 365 ~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 365 HTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 78999985 454433322110 00 11235789999 667666665567788887754
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.04 E-value=0.0022 Score=56.03 Aligned_cols=209 Identities=11% Similarity=0.072 Sum_probs=122.3
Q ss_pred eEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEE-ecCccccCC-ccCeEEEEE---eCCCCcEEEEec---------
Q 016974 161 VSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV-FGGEFQSGH-TADVLSVSI---SGSNSRMFVSGS--------- 226 (379)
Q Consensus 161 v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~~h-~~~v~~~~~---~~~~~~~l~sg~--------- 226 (379)
--+++|.+..+.++++.-..++|..||...+..... +......+. ...+..+.+ .+ .++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccccc
Confidence 345788876666566666899999999975533322 111000011 113467888 45 477777533
Q ss_pred ----CCCcEEEEEcc---CCccceEEEe--ccc-----------CCeeEEEEccCCCEEEEeeCC-CeEEEEECCCCcee
Q 016974 227 ----CDSTARLWDTR---VASRAVRTFH--GHE-----------GDVNTVKFFPDGNRFGTGSDD-GTCRLFDIRTGHQL 285 (379)
Q Consensus 227 ----~d~~i~vwd~~---~~~~~~~~~~--~h~-----------~~v~~v~~sp~g~~l~s~s~D-~~i~iwd~~~~~~~ 285 (379)
.+..|..+|+. +... +.... +.. ...+.++..++|+..++++.- +.|...+... +.+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~-~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~ 171 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKP-VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KTV 171 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCC-SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CCE
T ss_pred cccCCCCEEEEEcCCcCCCCCE-EEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEE
Confidence 25779999987 4432 22222 111 247899999999999999888 8888888653 334
Q ss_pred EEEeeccC-CCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE--EEec--ccccCCccCceeE-EEECCCCCe-E
Q 016974 286 QVYYQQHG-ENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV--VLNL--GSLQNSHEGRITC-LGLSADGSA-L 358 (379)
Q Consensus 286 ~~~~~~~~-~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~--~~~~--~~~~~~h~~~v~~-~~~s~d~~~-l 358 (379)
..+..... .......+.++++|+|+.|++....|.|..+|+..... +..- +.. +.-..... +..-.+|+. |
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~--~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDF--GTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCC--CCCTTEEEEEEEEETTEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCc--ccccCcccccccccCCEEEE
Confidence 43332221 11123367999999999888887799999999764322 1110 100 00111233 233346777 5
Q ss_pred EEeeCCCcEEEEecCc
Q 016974 359 CTGSWDTNLKIWAFGG 374 (379)
Q Consensus 359 ~s~s~D~~i~vw~~~~ 374 (379)
++.+..+.+.+.+-++
T Consensus 250 V~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 250 VGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEETTEEEEEECSST
T ss_pred EEcCCCCEEEEECCCC
Confidence 5566666666655443
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.98 E-value=0.0072 Score=53.01 Aligned_cols=227 Identities=10% Similarity=-0.014 Sum_probs=131.5
Q ss_pred CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEE-EeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEe
Q 016974 89 GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVA-CGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYV 167 (379)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 167 (379)
..|+..|+.+.+....+. .......++|++.+..|. +-..++.|..++++.... +.. ....+...-.....+++.
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~--~~~-~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG--VSS-YDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEE
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC--Ccc-cEEEEeCCCCCcCEEEEe
Confidence 458888887665444333 334578899998765554 445567888888764110 000 111121111234567776
Q ss_pred cCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-CcEEEEEccCCccceEEE
Q 016974 168 PDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-STARLWDTRVASRAVRTF 246 (379)
Q Consensus 168 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-~~i~vwd~~~~~~~~~~~ 246 (379)
+.++.+.++-...+.|.+.|+.......... ........+++.|.++.++.+.... +.|...++... ....+
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-----~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~--~~~~~ 158 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSL 158 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--CEEEE
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEE-----CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC--CeEEE
Confidence 6555555666778899999987544333321 1223467888888777777766543 67877776522 22222
Q ss_pred -ecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEE
Q 016974 247 -HGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVW 324 (379)
Q Consensus 247 -~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iw 324 (379)
...-...+.++++|++..|..+ +..+.|..+|+.. .....+.... ........+++. .+.++.+-...+.|..+
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~--~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDE--KRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECT--TTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecC--CccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 2223467899999876665544 5667899999864 3333333211 112345677775 35455555567789999
Q ss_pred eCCCce
Q 016974 325 DTLLAK 330 (379)
Q Consensus 325 d~~~~~ 330 (379)
+..+++
T Consensus 235 ~~~~g~ 240 (316)
T 1ijq_A 235 NRLTGS 240 (316)
T ss_dssp ETTTCC
T ss_pred eCCCCc
Confidence 865554
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.98 E-value=0.0072 Score=53.00 Aligned_cols=205 Identities=11% Similarity=-0.033 Sum_probs=123.0
Q ss_pred cEEEEEeeCCCCe-EEEEcCCCcEEEEECCC----CceeeEeecCCcceEEEEECCCCC-EEEEeeCCCcEEEEEcCCCC
Q 016974 69 KVYSLDWTSERNR-IVSASQDGRLIVWNALT----SQKTHAIKLPCAWVMTCAFSPTGQ-SVACGGLDSVCSIFNLNSPT 142 (379)
Q Consensus 69 ~v~~~~~~~~~~~-l~s~s~D~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~ 142 (379)
...+++|.++++. +++-..++.|..++... ......+.........+++++.+. +.++-...+.|.+.+++...
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 4678999986654 45556678999999865 222222222223456788887554 44555667888888876321
Q ss_pred CCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 143 DKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 143 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
........-.....+++.|.++..+++.... +.|...++.......... ........+++++.++.+
T Consensus 111 -------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~-----~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 111 -------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp -------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-----SSCSCEEEEEEETTTTEE
T ss_pred -------eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE-----CCCCCceEEEEeccCCEE
Confidence 1111121223457788888665545554333 678777775433222221 122346788898877788
Q ss_pred EEEecCCCcEEEEEccCCccceEEE-ec--ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 222 FVSGSCDSTARLWDTRVASRAVRTF-HG--HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 222 l~sg~~d~~i~vwd~~~~~~~~~~~-~~--h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
+.+-+..+.|..+|+... ..+.+ .. .......+++. .+..+++-...+.|..+|..+++.+..+
T Consensus 179 Y~~D~~~~~I~~~d~dg~--~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 179 YWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEETTTTEEEEEETTSC--SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEECCCCeEEEEecCCC--ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 888888889999998632 22222 21 22345678875 4556666667788999998777655544
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.88 E-value=0.011 Score=51.82 Aligned_cols=224 Identities=8% Similarity=-0.033 Sum_probs=127.5
Q ss_pred CCcEEEEECCCCceee-EeecCCcceEEEEECCCCCE-EEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEE
Q 016974 88 DGRLIVWNALTSQKTH-AIKLPCAWVMTCAFSPTGQS-VACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQ 165 (379)
Q Consensus 88 D~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~g~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 165 (379)
...|+..++....... .+-.......+++|++.+.. ..+-...+.|..++++..... ...+...-.....++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~------~~~~~~~l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV------QNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC------CEEEEECCSCCCEEE
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce------EEEEcCCCCCccEEE
Confidence 4568888876553111 11111234667889886554 445455677888877643110 011111112344567
Q ss_pred EecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEec-CCCcEEEEEccCCccceE
Q 016974 166 YVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS-CDSTARLWDTRVASRAVR 244 (379)
Q Consensus 166 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-~d~~i~vwd~~~~~~~~~ 244 (379)
+.+.++.++++-...+.|.+.++.......... ........+++.+..+.++.+-. ..+.|...+.... ...
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-----~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~ 158 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--SRF 158 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC--SCE
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe-----CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC--CeE
Confidence 766555666666677889999986544333221 22344578888876676766653 3567877776532 222
Q ss_pred EE-ecccCCeeEEEEccCCCEEE-EeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEE
Q 016974 245 TF-HGHEGDVNTVKFFPDGNRFG-TGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCY 322 (379)
Q Consensus 245 ~~-~~h~~~v~~v~~sp~g~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~ 322 (379)
.+ ...-...+.++++|++..|. +=+..+.|..+|+... ....+... .......+++.. +.++.+-...+.|.
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~----~~~~P~glav~~-~~lywtd~~~~~V~ 232 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKG----SLPHPFALTLFE-DILYWTDWSTHSIL 232 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECS----CCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEecC----CCCCceEEEEeC-CEEEEEecCCCeEE
Confidence 22 22234568999999666554 4456788999998643 33333221 123456777753 33444445667899
Q ss_pred EEeCCCce
Q 016974 323 VWDTLLAK 330 (379)
Q Consensus 323 iwd~~~~~ 330 (379)
.++..+++
T Consensus 233 ~~~~~~G~ 240 (318)
T 3sov_A 233 ACNKYTGE 240 (318)
T ss_dssp EEETTTCC
T ss_pred EEECCCCC
Confidence 99875554
No 283
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.87 E-value=0.0093 Score=52.54 Aligned_cols=185 Identities=14% Similarity=0.206 Sum_probs=113.4
Q ss_pred eEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC---CC----cEEEEecC--CCcEEEEEccCCccce
Q 016974 173 HLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS---NS----RMFVSGSC--DSTARLWDTRVASRAV 243 (379)
Q Consensus 173 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~----~~l~sg~~--d~~i~vwd~~~~~~~~ 243 (379)
.++.....+-+.+||+ +|..+..+.. ..+..+..-+. ++ ..+++... +++|.+|++......+
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 4666667788999999 6766665531 23344444331 11 12445555 6899999874322334
Q ss_pred EEEec------cc-CCeeEEEE--ccC-CC-EEEEeeCCCeEEEEECC---CC----ceeEEEeeccCCCCCCCeEEEEE
Q 016974 244 RTFHG------HE-GDVNTVKF--FPD-GN-RFGTGSDDGTCRLFDIR---TG----HQLQVYYQQHGENEIPHVTSIAF 305 (379)
Q Consensus 244 ~~~~~------h~-~~v~~v~~--sp~-g~-~l~s~s~D~~i~iwd~~---~~----~~~~~~~~~~~~~~~~~v~~~~f 305 (379)
..+.. .. ..+..+++ +|. +. +++....+|.+..|++. .+ +.+..+.. .+.+..+.+
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l------gsq~Egcvv 187 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM------NSQTEGMAA 187 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC------SSCEEEEEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC------CCCcceEEE
Confidence 43311 11 45677888 674 44 57777788999999883 22 23333322 124778899
Q ss_pred ccCCCEEEEEEecCcEEEEeCC-----CceEEEecccccCCccCceeEEEE--CCCCC-eEEEee-CCCcEEEEecC
Q 016974 306 SISGRLLFAGYSNGDCYVWDTL-----LAKVVLNLGSLQNSHEGRITCLGL--SADGS-ALCTGS-WDTNLKIWAFG 373 (379)
Q Consensus 306 s~~g~~l~sg~~dg~i~iwd~~-----~~~~~~~~~~~~~~h~~~v~~~~~--s~d~~-~l~s~s-~D~~i~vw~~~ 373 (379)
++....|+.+-++..|..++.. +.+.+..... ......+..|++ .++++ +|+++| .+++.-||+..
T Consensus 188 Dd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~--g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 188 DDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG--RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS--SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecC--CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999999999998777777744 2344443321 222336788887 56666 566555 67899999875
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.85 E-value=0.013 Score=51.64 Aligned_cols=279 Identities=8% Similarity=0.017 Sum_probs=138.9
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeec----CCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCC
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL----PCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTD 143 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~ 143 (379)
..+.+|.|.+++..++ ++.+|.|.. ....++.-..+.. ....+..+.|++ +..++ ++.++.+.. ..+...
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~- 109 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ- 109 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS-
T ss_pred CcEEEEEECCCCcEEE-EcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC-
Confidence 4689999987777777 455776533 2222332222211 234678888876 44444 455554322 222111
Q ss_pred CCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeE-EEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEE
Q 016974 144 KDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTC-VLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMF 222 (379)
Q Consensus 144 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i-~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 222 (379)
.+........+.+.+..+.+.+++ ..++. +.++.| +-.|- +..-.... .+....+..+.+.+ ++.++
T Consensus 110 ---tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~-~~~g~v~~S~Dg--G~tW~~~~----~~~~~~~~~~~~~~-~~~~~ 177 (327)
T 2xbg_A 110 ---SWSQIPLDPKLPGSPRLIKALGNG-SAEMI-TNVGAIYRTKDS--GKNWQALV----QEAIGVMRNLNRSP-SGEYV 177 (327)
T ss_dssp ---SCEECCCCTTCSSCEEEEEEEETT-EEEEE-ETTCCEEEESST--TSSEEEEE----CSCCCCEEEEEECT-TSCEE
T ss_pred ---CceECccccCCCCCeEEEEEECCC-CEEEE-eCCccEEEEcCC--CCCCEEee----cCCCcceEEEEEcC-CCcEE
Confidence 111111111123345666666543 34444 445544 33442 21111111 23345677888876 45677
Q ss_pred EEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEE
Q 016974 223 VSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTS 302 (379)
Q Consensus 223 ~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 302 (379)
+.+...+..+-+|-. ...-...-......+..+.+.|++..+ .++.+|.+.+.+...++.-....... ......+.+
T Consensus 178 ~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~-~~~~~~~~~ 254 (327)
T 2xbg_A 178 AVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPL-RRNSVGFLD 254 (327)
T ss_dssp EEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTT-SSCCSCEEE
T ss_pred EEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCc-ccCCcceEE
Confidence 666544444444421 111111122345678899999998755 45567887776422122111111000 011124788
Q ss_pred EEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEe
Q 016974 303 IAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWA 371 (379)
Q Consensus 303 ~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~ 371 (379)
+.|.++++++++|. +|.|+. ....++.-..+... ..+...++++.|.+++. ++.++.+|+|.-++
T Consensus 255 v~~~~~~~~~~~g~-~g~i~~-S~DgG~tW~~~~~~-~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 255 LAYRTPNEVWLAGG-AGALLC-SQDGGQTWQQDVDV-KKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEESSSSCEEEEES-TTCEEE-ESSTTSSCEECGGG-TTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEecCCCEEEEEeC-CCeEEE-eCCCCcccEEcCcc-CCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 99999888777654 676643 32333222222110 12235678888875555 55667788776654
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.82 E-value=0.018 Score=52.36 Aligned_cols=231 Identities=10% Similarity=-0.015 Sum_probs=134.6
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEe-eCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACG-GLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQ 165 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 165 (379)
....|+..++........+ .....+..++|++.+..|.-+ ...+.|..++++...... . ....+.........++
T Consensus 90 ~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~-~--~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-S--YDTVISRDIQAPDGLA 165 (400)
T ss_dssp ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C-C--CEEEECSSCSCEEEEE
T ss_pred ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC-c--ceEEEeCCCCCcccEE
Confidence 3467888888755443333 334567899999876655544 456778878775421000 0 1111221223456677
Q ss_pred EecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecC-CCcEEEEEccCCccceE
Q 016974 166 YVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSC-DSTARLWDTRVASRAVR 244 (379)
Q Consensus 166 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-d~~i~vwd~~~~~~~~~ 244 (379)
+.+.++.+.++-...+.|.+.++........+. ........+++.|..+.++.+-.. .+.|...++... ....
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-----~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~ 239 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYS 239 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-----CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEE
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCceEEEEe-----CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEE
Confidence 776555666666778889999987654443332 122346788888877777776533 467888887532 2222
Q ss_pred EEecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEE
Q 016974 245 TFHGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYV 323 (379)
Q Consensus 245 ~~~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~i 323 (379)
.....-...+.|+++|++..|..+ +..+.|..+|+.... ...+.... ........+++. .+.++.+-...+.|..
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~--~~l~~P~gl~v~-~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDE--KRLAHPFSLAVF-EDKVFWTDIINEAIFS 315 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECS--STTSSEEEEEEE-TTEEEEEESSSCSEEE
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCC--CCCCCCEEEEEe-CCEEEEecCCCCeEEE
Confidence 223333567899999877666555 567789999986433 33332211 112345677763 3344445556678999
Q ss_pred EeCCCceE
Q 016974 324 WDTLLAKV 331 (379)
Q Consensus 324 wd~~~~~~ 331 (379)
+|..+++.
T Consensus 316 ~~~~~G~~ 323 (400)
T 3p5b_L 316 ANRLTGSD 323 (400)
T ss_dssp EESSSCCC
T ss_pred EEcCCCCc
Confidence 98655543
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.79 E-value=0.0008 Score=66.72 Aligned_cols=155 Identities=11% Similarity=0.044 Sum_probs=88.8
Q ss_pred CeEEEEEe-CCCCcEEE-EecCC----CcEEEEEccCC-ccceEEEecccCCeeEEEEccCCCEEEEeeCC-----CeEE
Q 016974 208 DVLSVSIS-GSNSRMFV-SGSCD----STARLWDTRVA-SRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDD-----GTCR 275 (379)
Q Consensus 208 ~v~~~~~~-~~~~~~l~-sg~~d----~~i~vwd~~~~-~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D-----~~i~ 275 (379)
.+....++ | ++++++ +...+ ..|+++|+... ......+.. ....++|+|||+.|+....| ..|.
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 46677888 6 455444 43333 35999998765 321111211 23568999999988877765 3688
Q ss_pred EEECCCCce--eEEEeeccCCCCCCCeEEEEEccCCCEEEEEEec---CcEEEEeCCCc--eE-EEecccccCCccCcee
Q 016974 276 LFDIRTGHQ--LQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSN---GDCYVWDTLLA--KV-VLNLGSLQNSHEGRIT 347 (379)
Q Consensus 276 iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~d---g~i~iwd~~~~--~~-~~~~~~~~~~h~~~v~ 347 (379)
++++.++.. ...+... .......+.|||||++|+....+ ..|+++|+.++ .. ...+. ....+..+
T Consensus 251 ~~~lgt~~~~~~lv~~~~----~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~---~~~~~~~~ 323 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEH----NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR---PREKGVRY 323 (751)
T ss_dssp EEETTSCGGGCEEEEECC----CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS---CCCTTCCE
T ss_pred EEECCCCchhcEEEEecC----CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee---cCCCCceE
Confidence 888876542 2222111 11245688999999998876633 36888888664 22 02221 22344556
Q ss_pred EEEECCCCCeEEEeeCC--C--cEEEEecC
Q 016974 348 CLGLSADGSALCTGSWD--T--NLKIWAFG 373 (379)
Q Consensus 348 ~~~~s~d~~~l~s~s~D--~--~i~vw~~~ 373 (379)
.+.|+.++.+++.+..| + .|..+++.
T Consensus 324 s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 324 DVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp EEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred EEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 66655444555555444 3 34444443
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.75 E-value=0.042 Score=54.44 Aligned_cols=207 Identities=10% Similarity=-0.049 Sum_probs=121.3
Q ss_pred ccEEEEEeeCCCC-eEEEEcCCCcEEEEECCCC----ceeeEeecCCcceEEEEECCCCCEE-EEeeCCCcEEEEEcCCC
Q 016974 68 GKVYSLDWTSERN-RIVSASQDGRLIVWNALTS----QKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 68 ~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~ 141 (379)
..+.+|+|.+..+ ++++-...+.|+.+++... .....+.........+++.+.+..| .+-...+.|.+.+++..
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 4567899988544 4556566778888887642 2223333334456778898877544 45556778888887642
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCc
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 220 (379)
. ....+...-.....+++.|..+.++.+-... +.|...++....+...+. ........|++.+..++
T Consensus 504 ~-------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-----~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 504 K-------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGR 571 (791)
T ss_dssp S-------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-----SSCSCEEEEEEETTTTE
T ss_pred e-------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-----CCCCCceEEEEecCCCe
Confidence 1 1111222223467888888755544443333 678888876544433331 22345678888877788
Q ss_pred EEEEecCCCcEEEEEccCCccceEEEecc--cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 221 MFVSGSCDSTARLWDTRVASRAVRTFHGH--EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~~~~~~~~h--~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
++.+-...+.|...++.... ....+... -....+|++.. +.++++-...+.|...|..+++.+..+
T Consensus 572 LYwaD~~~~~I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 572 LYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEeCCCCcEEEEecCCCc-eEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 88877777889988876332 22222221 22345666643 344555566778888887766544433
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.74 E-value=0.028 Score=52.19 Aligned_cols=250 Identities=9% Similarity=0.050 Sum_probs=139.4
Q ss_pred EEEEEeeCC-CCeEEEEc-CCCcEEEEECCCCceeeEeecC---CcceEEEEE-------CCCCCEEEEeeCCC-----c
Q 016974 70 VYSLDWTSE-RNRIVSAS-QDGRLIVWNALTSQKTHAIKLP---CAWVMTCAF-------SPTGQSVACGGLDS-----V 132 (379)
Q Consensus 70 v~~~~~~~~-~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~---~~~v~~~~~-------s~~g~~l~~~~~d~-----~ 132 (379)
...|+|.|. ...|+.+. ..+.|++.|..++......... ......++| +++|+.|+.+...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 568899983 44454444 3467888898766554433332 224788999 99999777766554 2
Q ss_pred --EEEEEcCCCCCCCCCcce---eeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecC-------CCee-------
Q 016974 133 --CSIFNLNSPTDKDGNLPV---SRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDIT-------TGLR------- 193 (379)
Q Consensus 133 --i~iw~~~~~~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~-------~~~~------- 193 (379)
+.+.+... .+.+.. ...+... .....++..|+++.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~----~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 221 PSVYIIKRNA----DGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp EEEEEEECCT----TSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred ceEEEEecCC----CCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 34443222 111110 0111111 1223567788766667777788899999987 4432
Q ss_pred ----EEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccCCccce---EEEecc---c------------C
Q 016974 194 ----TSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAV---RTFHGH---E------------G 251 (379)
Q Consensus 194 ----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~---~~~~~h---~------------~ 251 (379)
...+ +..+....-..+++++....++++-+....|+.++.......+ ..+.+. . .
T Consensus 296 ~~g~~~~l---~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 296 NPNTFKQL---FTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN 372 (496)
T ss_dssp CTTTEEEE---EECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS
T ss_pred ccccccee---EecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC
Confidence 0011 0112223457889997544467777788899997754221111 223222 1 1
Q ss_pred Cee-EEEEc-------cCCCEEEEeeCCCeEEEEECCCCceeEEEeecc-----------C--CC------CCCCeEEEE
Q 016974 252 DVN-TVKFF-------PDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH-----------G--EN------EIPHVTSIA 304 (379)
Q Consensus 252 ~v~-~v~~s-------p~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-----------~--~~------~~~~v~~~~ 304 (379)
... .+... ++|.++++=.....|+.++ .++. +..+.... + .. .......++
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa 450 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV 450 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEE
Confidence 233 44554 4667777767788899998 4553 44443321 1 00 112467889
Q ss_pred EccC-CCEEEEEEecCcEEEEeCCCc
Q 016974 305 FSIS-GRLLFAGYSNGDCYVWDTLLA 329 (379)
Q Consensus 305 fs~~-g~~l~sg~~dg~i~iwd~~~~ 329 (379)
++++ |.+.++=..+..|+.++....
T Consensus 451 vd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 451 YDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCC
T ss_pred EECCCCEEEEEeCCCCEEEEEECCCC
Confidence 9986 554444445567888775443
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.69 E-value=0.028 Score=51.00 Aligned_cols=208 Identities=11% Similarity=-0.029 Sum_probs=123.6
Q ss_pred ccEEEEEeeCCCCeE-EEEcCCCcEEEEECCCC----ceeeEeecCCcceEEEEECCCC-CEEEEeeCCCcEEEEEcCCC
Q 016974 68 GKVYSLDWTSERNRI-VSASQDGRLIVWNALTS----QKTHAIKLPCAWVMTCAFSPTG-QSVACGGLDSVCSIFNLNSP 141 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~ 141 (379)
..+.+|+|.+..+.| .+-...+.|+.+++... .....+.........+++.+.+ .+..+-...+.|.+.+++..
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 457899999865554 45556788888887642 2222333334556788898854 45555556777888876532
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeC-CCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCc
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSG-DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 220 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 220 (379)
. . ...+...-.....+++.|.++.++.+-.. .+.|...++.......... ........+++++.+++
T Consensus 192 ~------~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-----~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 192 K------R-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGR 259 (400)
T ss_dssp S------E-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTE
T ss_pred c------e-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-----CCCCceEEEEEEeCCCE
Confidence 1 1 11112222345678888866544444322 3678877776443333221 12245678889987788
Q ss_pred EEEEecCCCcEEEEEccCCccceEEEec--ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEe
Q 016974 221 MFVSGSCDSTARLWDTRVASRAVRTFHG--HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYY 289 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~~~~~~~~--h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~ 289 (379)
++.+-+..+.|...|+..... ...... .......+++. .+..+.+-...+.|..+|..+++.+..+.
T Consensus 260 lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 260 LYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 888877788999999864322 222222 22345577773 34455666677889999977777665543
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.69 E-value=0.00082 Score=65.94 Aligned_cols=234 Identities=10% Similarity=-0.000 Sum_probs=126.3
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEe-eCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACG-GLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQ 165 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 165 (379)
..+.|+..++.+.+....+.. ...+..++|++.+..|..+ ...+.|..++++........ ...+.........++
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~---~~~i~~~~~~P~gla 459 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY---DTVISRDIQAPDGLA 459 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC---CCBCCSCC--CCCEE
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce---EEEEeCCCCCcceEE
Confidence 345777777766544333222 2345678899877666555 44577888887641100000 001111111223456
Q ss_pred EecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-CcEEEEEccCCccceE
Q 016974 166 YVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-STARLWDTRVASRAVR 244 (379)
Q Consensus 166 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-~~i~vwd~~~~~~~~~ 244 (379)
+.+.++.++++-...+.|.+.++........+.. .......+++.+..+.++.+-... +.|...++.... ..
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~-----~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~--~~ 532 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-----QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IY 532 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC-----SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC--CC
T ss_pred EEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC-----CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC--ee
Confidence 6544455566666778899999876544333321 112345667777666666655333 677777664221 12
Q ss_pred EE-ecccCCeeEEEEccCCC-EEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEE
Q 016974 245 TF-HGHEGDVNTVKFFPDGN-RFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCY 322 (379)
Q Consensus 245 ~~-~~h~~~v~~v~~sp~g~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~ 322 (379)
.+ .......+.|+|+|++. ++++-+..+.|..+|+.... ...+.... ........+++..+ .++++-...+.|.
T Consensus 533 ~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~--~~~~~P~glavd~~-~lywtd~~~~~V~ 608 (699)
T 1n7d_A 533 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDE--KRLAHPFSLAVFED-KVFWTDIINEAIF 608 (699)
T ss_dssp EESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCS--SSCSSCCCCEEETT-EEEEECSTTTCEE
T ss_pred EEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecC--CcCCCceEeEEECC-EEEEEeCCCCeEE
Confidence 22 12233567899999755 44555667889999986432 33332211 11122345565443 3444445667999
Q ss_pred EEeCCCceEEEec
Q 016974 323 VWDTLLAKVVLNL 335 (379)
Q Consensus 323 iwd~~~~~~~~~~ 335 (379)
.+|..+++....+
T Consensus 609 ~~d~~~G~~~~~i 621 (699)
T 1n7d_A 609 SANRLTGSDVNLL 621 (699)
T ss_dssp EEETTTEEEEECC
T ss_pred EEEccCCCceEEe
Confidence 9998777766555
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.68 E-value=0.024 Score=49.69 Aligned_cols=206 Identities=7% Similarity=-0.050 Sum_probs=123.8
Q ss_pred cEEEEEeeCCCC-eEEEEcCCCcEEEEECCCCcee-eEeecCCcceEEEEECCCC-CEEEEeeCCCcEEEEEcCCCCCCC
Q 016974 69 KVYSLDWTSERN-RIVSASQDGRLIVWNALTSQKT-HAIKLPCAWVMTCAFSPTG-QSVACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 69 ~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~ 145 (379)
.+.+++|.+..+ ++.+-...+.|..++...+... ..+.........+++.+.+ .+..+-...+.|.+++++....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-- 113 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-- 113 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE--
Confidence 466899998544 4556667788999998765321 2222223345678888754 4555555677888888764211
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEe-eCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITS-SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS 224 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 224 (379)
. ............+++.|.++.++.+- +..+.|...++.......... .....-..+++++.++.++.+
T Consensus 114 ----~-~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 114 ----K-VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-----SEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp ----E-EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEE
T ss_pred ----E-EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE-----CCCCCccEEEEeccCCEEEEE
Confidence 1 11112223456778887655444443 235677777775433222221 112345788899877888888
Q ss_pred ecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 225 GSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 225 g~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
-+..+.|..+|+.... ......+.......+++.. +..+.+-...+.|..+|..+++....+
T Consensus 184 D~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 184 DAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp ETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 8888899999986322 2222232344567788753 345566667788999998777655444
No 292
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.64 E-value=0.019 Score=50.99 Aligned_cols=186 Identities=12% Similarity=0.093 Sum_probs=95.6
Q ss_pred CCCcEEEEEcCCCCCCCCCcceeeeecc-----cccceEEEEEecC--CCc-eEEEeeC--CCeEEEeecCCCeeEEEec
Q 016974 129 LDSVCSIFNLNSPTDKDGNLPVSRMLSG-----HKGYVSCCQYVPD--EDT-HLITSSG--DQTCVLWDITTGLRTSVFG 198 (379)
Q Consensus 129 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~--~~~-~l~s~~~--d~~i~~wd~~~~~~~~~~~ 198 (379)
.+|.|.++|++.+... .... .+.+ .......+.+.++ +.. ++++-.. +.+|.+|++..+.....+-
T Consensus 81 ~~G~I~~~d~~~~~~~---~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~ 156 (355)
T 3sre_A 81 KSGKILLMDLNEKEPA---VSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL 156 (355)
T ss_dssp -CCEEEEEETTSSSCC---EEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEecCCCCCc---eEEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE
Confidence 5777888887642211 1111 1111 1234455666553 222 3333333 5678888775431111111
Q ss_pred CccccCCccCeEEEEEeCCCCcEEEEecC---C------------CcEEEEEccCCccceEEEecccCCeeEEEEccCCC
Q 016974 199 GEFQSGHTADVLSVSISGSNSRMFVSGSC---D------------STARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGN 263 (379)
Q Consensus 199 ~~~~~~h~~~v~~~~~~~~~~~~l~sg~~---d------------~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~ 263 (379)
..+........+.+.+.+ ++.++++... | ..=++|.+... + +..+...-..-+.++|+||++
T Consensus 157 ~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-~-~~~~~~~l~~pNGia~spDg~ 233 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-D-VRVVAEGFDFANGINISPDGK 233 (355)
T ss_dssp EEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-C-CEEEEEEESSEEEEEECTTSS
T ss_pred eccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-e-EEEeecCCcccCcceECCCCC
Confidence 111112234567787776 5666666541 1 12234433322 2 223333345678999999998
Q ss_pred EEEEe-eCCCeEEEEECCCCceeEE--EeeccCCCCCCCeEEEEEcc-CCCEEEEEEec-CcEEEEeC
Q 016974 264 RFGTG-SDDGTCRLFDIRTGHQLQV--YYQQHGENEIPHVTSIAFSI-SGRLLFAGYSN-GDCYVWDT 326 (379)
Q Consensus 264 ~l~s~-s~D~~i~iwd~~~~~~~~~--~~~~~~~~~~~~v~~~~fs~-~g~~l~sg~~d-g~i~iwd~ 326 (379)
.|..+ +..+.|..|++.....+.. .... ....-.+++++ +|.+.+++.-+ +.|..|+.
T Consensus 234 ~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~-----~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKHANWTLTPLRVLSF-----DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEEC-----SSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred EEEEEeCCCCeEEEEEECCCCcEecCEEEeC-----CCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 77655 5678899999864222211 1111 13457789999 59877766533 35555554
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.60 E-value=0.068 Score=52.95 Aligned_cols=229 Identities=10% Similarity=-0.027 Sum_probs=130.5
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEE-EEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQ 165 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 165 (379)
....|+..++....... +......+..++|++....| .+-...+.|..++++..... +. ....+.........++
T Consensus 402 n~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~-~~--~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-SS--YDTVISRDIQAPDGLA 477 (791)
T ss_dssp CBSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEE
T ss_pred cccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCC-cc--eeEEEecCCCCcceee
Confidence 34567777776544332 33334567889999865544 45455677888887642110 00 1111221223345677
Q ss_pred EecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-CcEEEEEccCCccceE
Q 016974 166 YVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-STARLWDTRVASRAVR 244 (379)
Q Consensus 166 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-~~i~vwd~~~~~~~~~ 244 (379)
+.+.+.+++++-...+.|.+.++........+. ........|++.+..+.++.+-... +.|...++... ....
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-----~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~ 551 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYS 551 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEE
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-----CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEE
Confidence 766665666777778899999987654433331 2233467888988777777765433 67888877532 2222
Q ss_pred EEecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEE
Q 016974 245 TFHGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCY 322 (379)
Q Consensus 245 ~~~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~ 322 (379)
.+.......+.|++++.+..|..+ .....|...++..... ..+.... ........|++ .+..|+... ..+.|.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~--~~l~~P~glav--~~~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDE--KRLAHPFSLAV--FEDKVFWTDIINEAIF 626 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECT--TTTSSEEEEEE--ETTEEEEEETTTTEEE
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCC--CccCCCCEEEE--eCCEEEEEECCCCEEE
Confidence 223333568899999866655544 5567899999865433 3332211 11223456665 344555554 556788
Q ss_pred EEeCCCce
Q 016974 323 VWDTLLAK 330 (379)
Q Consensus 323 iwd~~~~~ 330 (379)
..|..+++
T Consensus 627 ~~dk~tG~ 634 (791)
T 3m0c_C 627 SANRLTGS 634 (791)
T ss_dssp EEETTTCC
T ss_pred EEeCCCCc
Confidence 88765554
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.57 E-value=0.0055 Score=53.51 Aligned_cols=164 Identities=8% Similarity=0.017 Sum_probs=104.2
Q ss_pred EEEEEeCCCCcEEEEecCCCcEEEEEccCCccceEEEec----cc--CCeeEEEE---ccCCCEEEEee-----------
Q 016974 210 LSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHG----HE--GDVNTVKF---FPDGNRFGTGS----------- 269 (379)
Q Consensus 210 ~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~----h~--~~v~~v~~---sp~g~~l~s~s----------- 269 (379)
.+..|++.++.++++.-..++|..||..........+.+ .+ ..+..|.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 356677767777777778999999987533211112221 01 13578999 68877777533
Q ss_pred --CCCeEEEEECC---CCceeEEEeecc-CCC-------CCCCeEEEEEccCCCEEEEEEec-CcEEEEeCCCceEE-Ee
Q 016974 270 --DDGTCRLFDIR---TGHQLQVYYQQH-GEN-------EIPHVTSIAFSISGRLLFAGYSN-GDCYVWDTLLAKVV-LN 334 (379)
Q Consensus 270 --~D~~i~iwd~~---~~~~~~~~~~~~-~~~-------~~~~v~~~~fs~~g~~l~sg~~d-g~i~iwd~~~~~~~-~~ 334 (379)
.+..+..+|+. +++.+....-.. ... .......++.+++|+.-++++.. +.|...+....... ..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeee
Confidence 26789999998 776654332100 000 11237899999999988888888 88888876533222 11
Q ss_pred cccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 335 LGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 335 ~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
+........-..+.++++|||+.|+....++.+.-+++.
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 111001112236789999999988887779988888865
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.55 E-value=0.041 Score=48.99 Aligned_cols=233 Identities=10% Similarity=0.091 Sum_probs=114.0
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeE--ee---cCCcceEEEEECCC---CCEE-EEeeCC-----CcEE
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHA--IK---LPCAWVMTCAFSPT---GQSV-ACGGLD-----SVCS 134 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~--~~---~~~~~v~~~~~s~~---g~~l-~~~~~d-----~~i~ 134 (379)
.-+.++|.|+|+++++ ..+|.|++++ +++.... +. ........++|+|+ +..| ++-... ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3578999999986554 5669999998 4432211 11 11345788999998 4444 433322 4566
Q ss_pred EEEcCCCCCCCCCcceeeeec-----ccccceEEEEEecCCCceEEEeeC-------------CCeEEEeecCCCeeE-E
Q 016974 135 IFNLNSPTDKDGNLPVSRMLS-----GHKGYVSCCQYVPDEDTHLITSSG-------------DQTCVLWDITTGLRT-S 195 (379)
Q Consensus 135 iw~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~~-------------d~~i~~wd~~~~~~~-~ 195 (379)
.++..... ......+...+. .|. ...+.|.|++ .+.++.+. .+.|.-++....... .
T Consensus 109 r~~~~~~~-~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 109 RLRHLGER-GVLDRVVLDGIPARPHGLHS--GGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEECSSC-EEEEEEEEEEECCCTTCCCC--CCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEeCCCC-cCceEEEEEeCCCCCCCCcC--CceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 66655311 000001111122 132 3467898876 33443221 145555554320000 0
Q ss_pred Ee-------cCccccCCccCeEEEEEeCCCCcEEEEecCCCc--------EEEEEccC---------------CccceEE
Q 016974 196 VF-------GGEFQSGHTADVLSVSISGSNSRMFVSGSCDST--------ARLWDTRV---------------ASRAVRT 245 (379)
Q Consensus 196 ~~-------~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~--------i~vwd~~~---------------~~~~~~~ 245 (379)
.+ ...+..++ .....+++++.++.++++-..... |.+..-.. ...++..
T Consensus 185 pf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred cccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 00 00001122 123456677655666665433332 33221110 0012222
Q ss_pred EecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCce------eEEEeeccCCCCCCCeEEEEEccCCCEEEEEE
Q 016974 246 FHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ------LQVYYQQHGENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 246 ~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~------~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
+. +......++| .+|..+++.-..+.|...++..... ...+.. ....+..+++.|||.+.++..
T Consensus 264 ~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-----~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 264 WP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-----GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-----SSCCEEEEEECTTSCEEEEEC
T ss_pred cC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-----cCCCeeEEEECCCCcEEEEEe
Confidence 32 2234567777 4677776666677787777654321 112221 123578999999997666543
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.53 E-value=0.016 Score=51.48 Aligned_cols=140 Identities=12% Similarity=0.102 Sum_probs=82.1
Q ss_pred CCCcEEEEEccCCccceE--EEec-----ccCCeeEEEEcc--CCC-EE-EEeeC--CCeEEEEECCCCceeEEEeeccC
Q 016974 227 CDSTARLWDTRVASRAVR--TFHG-----HEGDVNTVKFFP--DGN-RF-GTGSD--DGTCRLFDIRTGHQLQVYYQQHG 293 (379)
Q Consensus 227 ~d~~i~vwd~~~~~~~~~--~~~~-----h~~~v~~v~~sp--~g~-~l-~s~s~--D~~i~iwd~~~~~~~~~~~~~~~ 293 (379)
.+|.|.++|......... .+.+ .......+.+.+ +|. +| ++-.. +.+|.+|++..+.....+.....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 688899999863211112 2222 234677788866 454 34 44333 56788887765422222222111
Q ss_pred CCCCCCeEEEEEccCCCEEEEEE-----------------ecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCC
Q 016974 294 ENEIPHVTSIAFSISGRLLFAGY-----------------SNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGS 356 (379)
Q Consensus 294 ~~~~~~v~~~~fs~~g~~l~sg~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~ 356 (379)
.......+.+.+.++|.+.++.. ..|.|+.+|....+.+ . . .-..-+.++||||++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~----~-~l~~pNGia~spDg~ 233 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--A----E-GFDFANGINISPDGK 233 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--E----E-EESSEEEEEECTTSS
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEe--e----c-CCcccCcceECCCCC
Confidence 12334578999999999887754 1256777775322221 1 1 112458899999998
Q ss_pred eEEEee-CCCcEEEEecC
Q 016974 357 ALCTGS-WDTNLKIWAFG 373 (379)
Q Consensus 357 ~l~s~s-~D~~i~vw~~~ 373 (379)
.|..+. ..+.|..|++.
T Consensus 234 ~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCeEEEEEEC
Confidence 777654 56889999885
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.43 E-value=0.0024 Score=62.68 Aligned_cols=205 Identities=12% Similarity=-0.032 Sum_probs=115.1
Q ss_pred cEEEEEeeCCCCeEEEE-cCCCcEEEEECCC----CceeeEeecCCcceEEEEECCCC-CEEEEeeCCCcEEEEEcCCCC
Q 016974 69 KVYSLDWTSERNRIVSA-SQDGRLIVWNALT----SQKTHAIKLPCAWVMTCAFSPTG-QSVACGGLDSVCSIFNLNSPT 142 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~-s~D~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~ 142 (379)
.+.+|+|.+.++.|+.+ ...+.|+.+++.. ......+.........+++.+.+ .++++-...+.|.+.+++...
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 35678999876665544 4567899998764 22222221122234567888654 444554566788888875421
Q ss_pred CCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcE
Q 016974 143 DKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRM 221 (379)
Q Consensus 143 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 221 (379)
....+.........+++.|.++.++++-... +.|...++.......... ........+++++.++.+
T Consensus 487 -------~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~-----~~l~~PnGlavd~~~~~L 554 (699)
T 1n7d_A 487 -------RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRL 554 (699)
T ss_dssp -------EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC-----SSCSSCCCEEECTTTCCE
T ss_pred -------eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe-----CCCCCccEEEEeccCCEE
Confidence 1111111112334567777655444444333 677777765332222111 112234568888777788
Q ss_pred EEEecCCCcEEEEEccCCccceEEEec---ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 222 FVSGSCDSTARLWDTRVASRAVRTFHG---HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 222 l~sg~~d~~i~vwd~~~~~~~~~~~~~---h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
+++-+..+.|..+++... ..+.+.. .......|++..+ .++++....+.|..+|..+++.+..+
T Consensus 555 Y~aD~~~~~I~~~d~dG~--~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 555 YWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEETTTTEEEEECSSSS--CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEEecCCCeEEEEccCCC--ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 888888889999988632 2222221 1223445666544 45566667788999998777665544
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.42 E-value=0.06 Score=47.92 Aligned_cols=238 Identities=11% Similarity=0.068 Sum_probs=117.6
Q ss_pred cceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceee--eecccccceEEEEEecC---CCceEEEeeC---C-
Q 016974 110 AWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSR--MLSGHKGYVSCCQYVPD---EDTHLITSSG---D- 180 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~---~~~~l~s~~~---d- 180 (379)
.....++|.|+|+++++ ..++.|.+++.+ +..++.. ...........++++|+ +..+.++-+. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~------G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPS------GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSS------CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCC------CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 44678899999986555 455877777522 1111111 11111234678899986 4444444332 3
Q ss_pred ---CeEEEeecCCC--e---eEEEec-CccccCCccCeEEEEEeCCCCcEEEEecCC-------------CcEEEEEccC
Q 016974 181 ---QTCVLWDITTG--L---RTSVFG-GEFQSGHTADVLSVSISGSNSRMFVSGSCD-------------STARLWDTRV 238 (379)
Q Consensus 181 ---~~i~~wd~~~~--~---~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-------------~~i~vwd~~~ 238 (379)
+.|..|+.... . ....+. ......|. ...+.+.+ ++.++++-+.. |.|.-.+...
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 56777776543 1 111111 00011233 34577776 56677764321 3444444321
Q ss_pred C--------ccceEEEecccCCeeEEEEcc-CCCEEEEeeC-CC--eEEEEECCCCcee----E-------EEeec--cC
Q 016974 239 A--------SRAVRTFHGHEGDVNTVKFFP-DGNRFGTGSD-DG--TCRLFDIRTGHQL----Q-------VYYQQ--HG 293 (379)
Q Consensus 239 ~--------~~~~~~~~~h~~~v~~v~~sp-~g~~l~s~s~-D~--~i~iwd~~~~~~~----~-------~~~~~--~~ 293 (379)
. ...+ ...+|. ....++|+| +|..+++-.. ++ .|.+.. .+... . .+... ..
T Consensus 179 ~~p~~npf~~~~i-~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~ 254 (354)
T 3a9g_A 179 RPPADNPFPNSPI-WSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDT 254 (354)
T ss_dssp CCCTTSSSTTCCE-EEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCCCCCCcE-EEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeec
Confidence 1 0111 123443 357899999 6766555432 22 233322 22100 0 00000 00
Q ss_pred CCCCCCeEEEEE-------ccCCCEEEEEEecCcEEEEeCCCc-eEEEecccccCCccCceeEEEECCCCCeEEEee
Q 016974 294 ENEIPHVTSIAF-------SISGRLLFAGYSNGDCYVWDTLLA-KVVLNLGSLQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 294 ~~~~~~v~~~~f-------s~~g~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
.........++| ..+|.++++....+.|...+.... +... ...+...-...+..+++.|||.+.++..
T Consensus 255 ~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 255 GSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRK-ISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEE-EEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccc-eeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 001123678888 467777776666778888886642 2211 1111122235688999999998777654
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.32 E-value=0.13 Score=49.58 Aligned_cols=222 Identities=9% Similarity=-0.016 Sum_probs=131.6
Q ss_pred CCCcEEEEECCCCceeeEeec-CCcceEEEEECCCCCEEEE-eeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKL-PCAWVMTCAFSPTGQSVAC-GGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCC 164 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 164 (379)
....|+.-++.+......+.. .......++|++.+..|.. -..++.|..++++... ....+.........+
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-------~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-------LEHVVEFGLDYPEGM 85 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-------CEEEECSSCSCCCEE
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-------cEEEEeCCCCCcceE
Confidence 456788888876544333322 2245788999987665554 4456778877776421 111111111234456
Q ss_pred EEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe-cCCCcEEEEEccCCccce
Q 016974 165 QYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG-SCDSTARLWDTRVASRAV 243 (379)
Q Consensus 165 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg-~~d~~i~vwd~~~~~~~~ 243 (379)
++.+.++++..+-...+.|.+.++....+..... ........+++.|..+.++.+- +..+.|...++... ..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-----~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~--~~ 158 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-----KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS--ER 158 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-----SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SC
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-----CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC--ce
Confidence 6665555556666677889888886554333321 2234467889998777777765 33566777776532 22
Q ss_pred EEEecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcE
Q 016974 244 RTFHGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDC 321 (379)
Q Consensus 244 ~~~~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i 321 (379)
..+.......+.+++++++..|..+ ...+.|..+|+..... ..+... ......+++.. + .|+... ..+.|
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~-----l~~P~glav~~-~-~ly~tD~~~~~I 230 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD-----LPHPFGLTQYQ-D-YIYWTDWSRRSI 230 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC-----CSCEEEEEEET-T-EEEEEETTTTEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc-----CCCceEEEEEC-C-EEEEecCCCCEE
Confidence 2333344567899999976666554 5677899999865433 333221 12356777754 3 444444 57788
Q ss_pred EEEeCCCce
Q 016974 322 YVWDTLLAK 330 (379)
Q Consensus 322 ~iwd~~~~~ 330 (379)
...|..+++
T Consensus 231 ~~~dk~tg~ 239 (628)
T 4a0p_A 231 ERANKTSGQ 239 (628)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCC
Confidence 888865553
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.17 E-value=0.19 Score=48.38 Aligned_cols=225 Identities=8% Similarity=-0.013 Sum_probs=122.5
Q ss_pred CCcEEEEECCCCc-eeeEeecCCcceEEEEECCCCCEEEEee-CCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEE
Q 016974 88 DGRLIVWNALTSQ-KTHAIKLPCAWVMTCAFSPTGQSVACGG-LDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQ 165 (379)
Q Consensus 88 D~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 165 (379)
...|+.-|+.... ....+.........++|++.+..|.-+. ..+.|..++++.... ....+...-.....++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~------~~~v~~~~~~~P~GlA 90 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------VQNVVVSGLLSPDGLA 90 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCEEEEE
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc------eEEEEeCCCCCcCeEE
Confidence 4567777765432 1111222334577899998776665544 456777777754210 0111222223466778
Q ss_pred EecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEec-CCCcEEEEEccCCccceE
Q 016974 166 YVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS-CDSTARLWDTRVASRAVR 244 (379)
Q Consensus 166 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-~d~~i~vwd~~~~~~~~~ 244 (379)
+.+.++++.++-...+.|.+.++....+..... ........+++.|.++.++.|-- ..+.|...++... ....
T Consensus 91 vD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-----~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-~~~~ 164 (619)
T 3s94_A 91 CDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFI 164 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEE
T ss_pred EEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe-----CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC-ceEE
Confidence 877666666677778899999987654433331 12234567888887777777652 2455665555422 1222
Q ss_pred EEecccCCeeEEEEccCCCEEEEe-eCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEE-EecCcEE
Q 016974 245 TFHGHEGDVNTVKFFPDGNRFGTG-SDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAG-YSNGDCY 322 (379)
Q Consensus 245 ~~~~h~~~v~~v~~sp~g~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg-~~dg~i~ 322 (379)
.....-...+.+++++++..|..+ ...+.|...|+..... ..+.... ......+++..+ .|+.. ..++.|.
T Consensus 165 l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~~----~~~P~gi~~~~~--~ly~td~~~~~V~ 237 (619)
T 3s94_A 165 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGS----LPHPFALTLFED--ILYWTDWSTHSIL 237 (619)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE-C-------------CCCEEESSS--EEEEECTTTCSEE
T ss_pred EEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc-EEEEeCC----CCCceEEEEeCC--EEEEecCCCCEEE
Confidence 222234467899999976655444 5667899999864332 2221101 112346676655 44444 4667899
Q ss_pred EEeCCCceE
Q 016974 323 VWDTLLAKV 331 (379)
Q Consensus 323 iwd~~~~~~ 331 (379)
..|..+++.
T Consensus 238 ~~d~~tg~~ 246 (619)
T 3s94_A 238 ACNKYTGEG 246 (619)
T ss_dssp EEESSSCCC
T ss_pred EEECCCCcc
Confidence 988766643
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.14 E-value=0.12 Score=45.43 Aligned_cols=234 Identities=11% Similarity=0.041 Sum_probs=117.5
Q ss_pred cceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceee-eecccccceEEEEEecCCCceEEEeeCCCeEEEeec
Q 016974 110 AWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSR-MLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDI 188 (379)
Q Consensus 110 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~ 188 (379)
..+.++.|.+.+..+++ +.++.+ +...+... .+.... ........+..+.+.+ +..++ ++.++.|..- .
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~----tW~~~~~~~~~~~~~~~~i~~~~--~~~~~-~g~~g~i~~S-~ 105 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATL-METRDGGQ----TWEPRTLVLDHSDYRFNSVSFQG--NEGWI-VGEPPIMLHT-T 105 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEE-EEESSTTS----SCEECCCCCSCCCCEEEEEEEET--TEEEE-EEETTEEEEE-S
T ss_pred CcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCC----CCeECCCCCCCCCccEEEEEecC--CeEEE-EECCCeEEEE-C
Confidence 35778888877777774 456654 22222111 111110 0011233577788865 23344 4455644331 1
Q ss_pred CCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcE-EEEEccCCccceEEEecccCCeeEEEEccCCCEEEE
Q 016974 189 TTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTA-RLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGT 267 (379)
Q Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i-~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s 267 (379)
..+..-...... ..+...+..+.+.+ ++.+++.+. ++.| +-.|- ...-.....++...+..+.+.|++.+++.
T Consensus 106 DgG~tW~~~~~~--~~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~S~Dg--G~tW~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (327)
T 2xbg_A 106 DGGQSWSQIPLD--PKLPGSPRLIKALG-NGSAEMITN-VGAIYRTKDS--GKNWQALVQEAIGVMRNLNRSPSGEYVAV 179 (327)
T ss_dssp STTSSCEECCCC--TTCSSCEEEEEEEE-TTEEEEEET-TCCEEEESST--TSSEEEEECSCCCCEEEEEECTTSCEEEE
T ss_pred CCCCCceECccc--cCCCCCeEEEEEEC-CCCEEEEeC-CccEEEEcCC--CCCCEEeecCCCcceEEEEEcCCCcEEEE
Confidence 112211111100 11223456676654 445666554 4543 33331 11112222345567899999999988877
Q ss_pred eeCCCeEEEEEC--CCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCc
Q 016974 268 GSDDGTCRLFDI--RTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGR 345 (379)
Q Consensus 268 ~s~D~~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~ 345 (379)
+...+..+-+|- .+...+ .. .....+..+.+++++++++ .+.+|.+++.+...++....+......+...
T Consensus 180 g~~G~~~~S~d~gG~tW~~~---~~----~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~ 251 (327)
T 2xbg_A 180 SSRGSFYSTWEPGQTAWEPH---NR----TTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVG 251 (327)
T ss_dssp ETTSSEEEEECTTCSSCEEE---EC----CSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSC
T ss_pred ECCCcEEEEeCCCCCceeEC---CC----CCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcc
Confidence 655444444552 222222 11 1123578899999998665 4467888777422233222221100012235
Q ss_pred eeEEEECCCCCeEEEeeCCCcEE
Q 016974 346 ITCLGLSADGSALCTGSWDTNLK 368 (379)
Q Consensus 346 v~~~~~s~d~~~l~s~s~D~~i~ 368 (379)
+.++++.+++..++++ .++.|.
T Consensus 252 ~~~v~~~~~~~~~~~g-~~g~i~ 273 (327)
T 2xbg_A 252 FLDLAYRTPNEVWLAG-GAGALL 273 (327)
T ss_dssp EEEEEESSSSCEEEEE-STTCEE
T ss_pred eEEEEecCCCEEEEEe-CCCeEE
Confidence 8899999888877765 467663
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.06 E-value=0.2 Score=46.59 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=113.3
Q ss_pred eEEEEEecC-CCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEE-------eCCCCcEEEEecCCC---
Q 016974 161 VSCCQYVPD-EDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSI-------SGSNSRMFVSGSCDS--- 229 (379)
Q Consensus 161 v~~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~~l~sg~~d~--- 229 (379)
...++|.|. .+.++++-...+.|++.|+.++......... .........+++ ++....++++...++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~--~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN--TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT--TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC--ccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 457788883 4444555554577889998887655444211 112335788888 764443555544442
Q ss_pred ---cEEEEEccCCccce-----EEEecccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECC-------CCce---------
Q 016974 230 ---TARLWDTRVASRAV-----RTFHGHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIR-------TGHQ--------- 284 (379)
Q Consensus 230 ---~i~vwd~~~~~~~~-----~~~~~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~-------~~~~--------- 284 (379)
.|.+.+........ ..+.. -...+.++++| ++.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 25565533201110 22222 12456789999 55656666788889999987 4443
Q ss_pred --eEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEEeC--CCceE---EEeccc-ccCCcc---------Cce
Q 016974 285 --LQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVWDT--LLAKV---VLNLGS-LQNSHE---------GRI 346 (379)
Q Consensus 285 --~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~--~~~~~---~~~~~~-~~~~h~---------~~v 346 (379)
...+... . .......++|+|+|++|+.+. ....|+.++. ..+.. ....+. -..++. ..-
T Consensus 298 g~~~~l~~~-~--~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 298 NTFKQLFTI-A--DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp TTEEEEEEC-S--SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred cccceeEec-C--CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 1122111 1 123457899999999766665 4567888553 33221 111111 001110 112
Q ss_pred e-EEEEC-------CCCCeEEEeeCCCcEEEEecCc
Q 016974 347 T-CLGLS-------ADGSALCTGSWDTNLKIWAFGG 374 (379)
Q Consensus 347 ~-~~~~s-------~d~~~l~s~s~D~~i~vw~~~~ 374 (379)
. .++.. ++|.+.++=.....|+.++.++
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G 410 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG 410 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC
Confidence 3 44554 4566666666677888887655
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.05 E-value=0.15 Score=45.10 Aligned_cols=60 Identities=20% Similarity=0.169 Sum_probs=40.8
Q ss_pred eccccccccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEee------cCCcceEEEEECCC
Q 016974 61 RTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIK------LPCAWVMTCAFSPT 120 (379)
Q Consensus 61 ~~l~gH~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~------~~~~~v~~~~~s~~ 120 (379)
.++...-..-+.|+|.|+|.++++--..|.|++++..+++...... ........++|+|+
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 3444444457899999999888776668999999866555422211 12345788999995
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.86 E-value=0.19 Score=43.21 Aligned_cols=221 Identities=13% Similarity=0.165 Sum_probs=101.9
Q ss_pred CcEEEEECCCCceeeE--eecCCcceEEEEECCCCCEEEEeeCC-----CcEEEEEcCCCCCCCCCcceeeeecccccce
Q 016974 89 GRLIVWNALTSQKTHA--IKLPCAWVMTCAFSPTGQSVACGGLD-----SVCSIFNLNSPTDKDGNLPVSRMLSGHKGYV 161 (379)
Q Consensus 89 ~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v 161 (379)
..+.++|..+.+-... +.........+ ..++..++.||.+ ..+.+||+..... ..+.....+......-
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~--~~W~~~~~~p~~r~~~ 106 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADED--GVWYSVAPMNVRRGLA 106 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTT--CCCEEECCCSSCCBSC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCC--CeeEECCCCCCCccce
Confidence 3678888776542221 11111111122 2356777777765 3577787764320 0011111111111111
Q ss_pred EEEEEecCCCceEEEeeCC-----CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-----CcE
Q 016974 162 SCCQYVPDEDTHLITSSGD-----QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-----STA 231 (379)
Q Consensus 162 ~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-----~~i 231 (379)
.++.+ ++..++.|+.+ ..+.+||+.+......-... .... . .++... ++++++.|+.+ ..+
T Consensus 107 ~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~-~-~~~~~~--~~~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 107 GATTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ--TARE-G-AGLVVA--SGVIYCLGGYDGLNILNSV 177 (301)
T ss_dssp EEEEE---TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS--SCCB-S-CEEEEE--TTEEEEECCBCSSCBCCCE
T ss_pred eEEEE---CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC--CCcc-c-ceEEEE--CCEEEEECCCCCCcccceE
Confidence 12222 24566666643 35788898776533322111 1111 1 111222 45677777765 357
Q ss_pred EEEEccCCccceEEEecccCC--eeEEEEccCCCEEEEeeCC-----CeEEEEECCCCceeEEEeeccCCCCCCCeEEEE
Q 016974 232 RLWDTRVASRAVRTFHGHEGD--VNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIA 304 (379)
Q Consensus 232 ~vwd~~~~~~~~~~~~~h~~~--v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 304 (379)
.+||..... -..+..-..+ -.++.. -++..++.|+.+ ..+.+||+.+.+-...- .... .......+.
T Consensus 178 ~~~d~~~~~--W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~-~r~~~~~~~ 251 (301)
T 2vpj_A 178 EKYDPHTGH--WTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT--SMTT-PRCYVGATV 251 (301)
T ss_dssp EEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC--CCSS-CCBSCEEEE
T ss_pred EEEeCCCCc--EEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC--CCCC-cccceeEEE
Confidence 788876431 1111111111 112222 266777888764 46889999876432211 1111 111112222
Q ss_pred EccCCCEEEEEEec-----CcEEEEeCCCce
Q 016974 305 FSISGRLLFAGYSN-----GDCYVWDTLLAK 330 (379)
Q Consensus 305 fs~~g~~l~sg~~d-----g~i~iwd~~~~~ 330 (379)
.++++++.|+.+ ..+.+||..+.+
T Consensus 252 --~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 252 --LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp --ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred --ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 367777777654 357788876543
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.83 E-value=0.38 Score=46.31 Aligned_cols=286 Identities=8% Similarity=0.004 Sum_probs=144.4
Q ss_pred ccEEEEEeeCCCC-eEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeC--CCcEEEEEcCCCCCC
Q 016974 68 GKVYSLDWTSERN-RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL--DSVCSIFNLNSPTDK 144 (379)
Q Consensus 68 ~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--d~~i~iw~~~~~~~~ 144 (379)
.....+++.+.++ ++++-...+.|.+.+.........+.........+++.|.+.+|..+.. .+.|...+++...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-- 161 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-- 161 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc--
Confidence 3467888888555 4555567788999997644332222233445678899997665555543 3445545544211
Q ss_pred CCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE
Q 016974 145 DGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS 224 (379)
Q Consensus 145 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 224 (379)
.. ......-.....+++.++++.+.++-...+.|...|+....+....... ..| ...+++.. ..++.+
T Consensus 162 ----~~-~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~---P~gi~~~~--~~ly~t 229 (619)
T 3s94_A 162 ----RF-IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPH---PFALTLFE--DILYWT 229 (619)
T ss_dssp ----CE-EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC--------------CCCEEESS--SEEEEE
T ss_pred ----eE-EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC--CCC---ceEEEEeC--CEEEEe
Confidence 11 1111122345678888876665666666778888888654333222111 122 23455543 256666
Q ss_pred ecCCCcEEEEEccCCccc------------eEEEecccC------------CeeEEEE-----------ccCCC------
Q 016974 225 GSCDSTARLWDTRVASRA------------VRTFHGHEG------------DVNTVKF-----------FPDGN------ 263 (379)
Q Consensus 225 g~~d~~i~vwd~~~~~~~------------~~~~~~h~~------------~v~~v~~-----------sp~g~------ 263 (379)
-...+.|...|....... +..+..... ....+++ .|.|.
T Consensus 230 d~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~ 309 (619)
T 3s94_A 230 DWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENG 309 (619)
T ss_dssp CTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTS
T ss_pred cCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccC
Confidence 667778888776433211 111100000 0001111 12221
Q ss_pred ---------EEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE-ecCcEEEEeCCCceEEE
Q 016974 264 ---------RFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY-SNGDCYVWDTLLAKVVL 333 (379)
Q Consensus 264 ---------~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~-~dg~i~iwd~~~~~~~~ 333 (379)
+|+. +..+.|+..++........... ......+..++|++.+..|+..+ ..+.|+.++........
T Consensus 310 ~~C~~~~~~~Ll~-~~~~~i~~i~l~~~~~~~~~~~---~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~ 385 (619)
T 3s94_A 310 KTCKDGATELLLL-ARRTDLRRISLDTPDFTDIVLQ---LEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF 385 (619)
T ss_dssp SCBCSSCSEEEEE-EESSCEEEEESSSTTCCCEECC---CSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cccCCCCceEEEE-EcccceEEEecCCCccceeEEe---ccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE
Confidence 1111 1223344444443321111100 01123467899999766666665 56789888875432222
Q ss_pred ecccccCCccCceeEEEECCCCC-eEEEeeCCCcEEEEecCce
Q 016974 334 NLGSLQNSHEGRITCLGLSADGS-ALCTGSWDTNLKIWAFGGY 375 (379)
Q Consensus 334 ~~~~~~~~h~~~v~~~~~s~d~~-~l~s~s~D~~i~vw~~~~~ 375 (379)
.+ ...-.....+++.+.+. ..++-+..+.|.+.++++.
T Consensus 386 v~----~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 386 VV----TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp EE----CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EE----ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 22 11123457888887555 4444445678888887763
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.80 E-value=0.24 Score=43.58 Aligned_cols=197 Identities=12% Similarity=0.188 Sum_probs=113.4
Q ss_pred CCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEEecC----CCc--e-EEEeeC--CCeEEEeec--C
Q 016974 121 GQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPD----EDT--H-LITSSG--DQTCVLWDI--T 189 (379)
Q Consensus 121 g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~--~-l~s~~~--d~~i~~wd~--~ 189 (379)
...++....++-+.+||++.. ....+.. +.+..+...|. +.. + +++.-. +++|.+|++ .
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G~--------~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~ 109 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDGK--------MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK 109 (355)
T ss_dssp GCEEEEEETTTEEEEEETTSC--------EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT
T ss_pred ccEEEEEcCCCCEEEEcCCCc--------EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC
Confidence 345666666778999998532 2222322 33444444441 111 2 333334 689999977 3
Q ss_pred CCeeEEEecCcccc--CCccCeEEEEE--eCCCCc-EEEEecCCCcEEEEEccC------CccceEEEecccCCeeEEEE
Q 016974 190 TGLRTSVFGGEFQS--GHTADVLSVSI--SGSNSR-MFVSGSCDSTARLWDTRV------ASRAVRTFHGHEGDVNTVKF 258 (379)
Q Consensus 190 ~~~~~~~~~~~~~~--~h~~~v~~~~~--~~~~~~-~l~sg~~d~~i~vwd~~~------~~~~~~~~~~h~~~v~~v~~ 258 (379)
++. +..+...... .....+..+++ ++..+. +++....+|.+..|++.. ..+.++.+.- .+.+..+..
T Consensus 110 ~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~Egcvv 187 (355)
T 3amr_A 110 NGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAA 187 (355)
T ss_dssp TCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEE
T ss_pred CCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEE
Confidence 333 3333210000 01134455555 554443 567777889999998842 1244566653 457888899
Q ss_pred ccCCCEEEEeeCCCeEEEEECC-----CCceeEEEeeccCCCCCCCeEEEEE--ccCCC-EEEEEE-ecCcEEEEeCC-C
Q 016974 259 FPDGNRFGTGSDDGTCRLFDIR-----TGHQLQVYYQQHGENEIPHVTSIAF--SISGR-LLFAGY-SNGDCYVWDTL-L 328 (379)
Q Consensus 259 sp~g~~l~s~s~D~~i~iwd~~-----~~~~~~~~~~~~~~~~~~~v~~~~f--s~~g~-~l~sg~-~dg~i~iwd~~-~ 328 (379)
.+....|..+-+|..|..++.. +++.+..+. ...-...+..+++ .++|+ ||++++ .+.+..+||.. .
T Consensus 188 Dd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~---~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 188 DDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD---GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp ETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS---SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred cCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec---CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 9988899999998888888854 223332221 1111224777777 56666 777776 67799999985 3
Q ss_pred ceEE
Q 016974 329 AKVV 332 (379)
Q Consensus 329 ~~~~ 332 (379)
.+.+
T Consensus 265 ~~~v 268 (355)
T 3amr_A 265 NKYV 268 (355)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 4433
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.79 E-value=0.08 Score=47.05 Aligned_cols=106 Identities=20% Similarity=0.263 Sum_probs=62.6
Q ss_pred CCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeec-cCCCCCCCeEEEEEccC---CCEEEEEEec------Cc
Q 016974 251 GDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQ-HGENEIPHVTSIAFSIS---GRLLFAGYSN------GD 320 (379)
Q Consensus 251 ~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~fs~~---g~~l~sg~~d------g~ 320 (379)
...+.++|.|+|+++++ ..++.|.+++ .+.. ..+... ...........++|+|+ +..|+..... ..
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34678999999986665 5569999998 3432 222111 11111235789999998 5666555442 57
Q ss_pred EEEEeCCCce-----EEEe-ccc-ccCCccCceeEEEECCCCCeEEEee
Q 016974 321 CYVWDTLLAK-----VVLN-LGS-LQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 321 i~iwd~~~~~-----~~~~-~~~-~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
|..|+..... .+.. +.. ....|.. ..++|.|||.+.++-+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~--~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSG--GRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCC--CCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCC--ceEEECCCCCEEEEEC
Confidence 8888865331 1111 210 0122433 5789999998777643
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.73 E-value=0.7 Score=47.90 Aligned_cols=277 Identities=12% Similarity=0.159 Sum_probs=134.5
Q ss_pred CCCeEEEEcCCCcEEEEECCC-Cc-----eeeEeecC----CcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 78 ERNRIVSASQDGRLIVWNALT-SQ-----KTHAIKLP----CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 78 ~~~~l~s~s~D~~v~iwd~~~-~~-----~~~~~~~~----~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
++..++-+..+|.+.+-.+.. +. .+..++.. .....++++-.+| ++..||..|.-.+|.+......+..
T Consensus 285 ~~~~~LL~~~~G~l~~l~l~~d~~~~~~~~V~~l~i~~~~~~~~~ssl~~l~~g-~lFvgS~~Gds~l~~~~~~~~~~~~ 363 (1158)
T 3ei3_A 285 NGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG-VVFVGSRLGDSQLVKLNVDSNEQGS 363 (1158)
T ss_dssp TSSEEEEEETTCEEEEEEEEEEC-----CEEEEEEEEEEEECSCCSEEEECSTT-EEEEECSSSCEEEEEECSSCCTTSC
T ss_pred CCCEEEEEeCCCCEEEEEEEEcCCccCceeEEEEEEEEcCCccCccEEEEECCC-EEEEEEecCCcEEEEEecCCCCccc
Confidence 445666677888877654421 11 22222211 1112345555444 7888888888888888754322121
Q ss_pred c-ceeeeecccccceEEEEEecC---CCceEEEee---CCCeEEEeecCCCeeE-EEecCccccCCccCeEEEEEeC--C
Q 016974 148 L-PVSRMLSGHKGYVSCCQYVPD---EDTHLITSS---GDQTCVLWDITTGLRT-SVFGGEFQSGHTADVLSVSISG--S 217 (379)
Q Consensus 148 ~-~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~~---~d~~i~~wd~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~--~ 217 (379)
. .....+. .-++|..+..... +...|++++ .+|++++..-.-+... ... + ......++++.... .
T Consensus 364 ~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~--~--l~gv~~iWtl~~~~~~~ 438 (1158)
T 3ei3_A 364 YVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI--D--LPGIKGLWPLRSDPNRE 438 (1158)
T ss_dssp CEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEE--C--CCSCCEEEEECCCSSCS
T ss_pred eEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEee--c--CCCccEEEEEeecCCCC
Confidence 1 2233333 2356776666432 112455443 4577877643222111 111 1 12223455544321 1
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEe--cccCCeeEEEEcc-CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFH--GHEGDVNTVKFFP-DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGE 294 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~v~~sp-~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 294 (379)
...+++.+-.+.+ +++.+.. ..+.... +-......++... .+..++=... ..|++.+......+..+..+.
T Consensus 439 ~~~yLvlS~~~~T-~Vl~i~~--e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~-~~Irli~~~~~~~~~~w~~p~-- 512 (1158)
T 3ei3_A 439 TDDTLVLSFVGQT-RVLMLNG--EEVEETELMGFVDDQQTFFCGNVAHQQLIQITS-ASVRLVSQEPKALVSEWKEPQ-- 512 (1158)
T ss_dssp SCCEEEEEETTEE-EEEEEET--TEEEEECCTTCCSSSCEEEEEEETTTEEEEEES-SCEEEEESSSCCEEEEECCTT--
T ss_pred CCCEEEEECCCCe-EEEEEeC--CcccccccccccCCCCcEEEEEcCCCeEEEEec-CEEEEEECCCCeEEEEEECCC--
Confidence 2345555544444 4554421 1122221 1000111111111 1223333322 346677765544554443221
Q ss_pred CCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCC------CCeEEEeeC-CCcE
Q 016974 295 NEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSAD------GSALCTGSW-DTNL 367 (379)
Q Consensus 295 ~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d------~~~l~s~s~-D~~i 367 (379)
...|..++.+ +..++.+. ++.+.+++...+.... ... ..-...|.|+++.|. +.++|.|.+ |++|
T Consensus 513 --~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~-~~~--~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv 584 (1158)
T 3ei3_A 513 --AKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQ-ISH--TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA 584 (1158)
T ss_dssp --CCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEE-EEE--EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEE
T ss_pred --CCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceee-ecc--cCCCCceEEEEeecCCCCcccccEEEEEECCCCEE
Confidence 1236666544 34555554 6788888765443222 111 112457999999863 479999998 9999
Q ss_pred EEEecCc
Q 016974 368 KIWAFGG 374 (379)
Q Consensus 368 ~vw~~~~ 374 (379)
+|+++..
T Consensus 585 ~I~sL~~ 591 (1158)
T 3ei3_A 585 RILKLPS 591 (1158)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999875
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.51 E-value=0.4 Score=42.51 Aligned_cols=234 Identities=11% Similarity=0.078 Sum_probs=116.5
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCc-eeeEee---cCCcceEEEEECCC----CCEEEEeeC---C----Cc
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQ-KTHAIK---LPCAWVMTCAFSPT----GQSVACGGL---D----SV 132 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~---~~~~~v~~~~~s~~----g~~l~~~~~---d----~~ 132 (379)
..-..++|.|+|++++ +..+|.|+++| .+++ .+..+. ........++|+|+ +.+.++-.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3467899999997555 45669999997 3454 111111 11245788999997 444444332 2 45
Q ss_pred EEEEEcCCCCCCCCCcc-eeeeec---ccccceEEEEEecCCCceEEEeeC-------------CCeEEEeecCCCe---
Q 016974 133 CSIFNLNSPTDKDGNLP-VSRMLS---GHKGYVSCCQYVPDEDTHLITSSG-------------DQTCVLWDITTGL--- 192 (379)
Q Consensus 133 i~iw~~~~~~~~~~~~~-~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~-------------d~~i~~wd~~~~~--- 192 (379)
|..++.......-.... +...+. .|. ...+.|.|++. +.++-+. .+.|...+.....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 55666543210000001 111111 232 34578888763 4443221 1344444432210
Q ss_pred ----eEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCc---EEEEEccC---------------CccceEEE-ecc
Q 016974 193 ----RTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDST---ARLWDTRV---------------ASRAVRTF-HGH 249 (379)
Q Consensus 193 ----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~---i~vwd~~~---------------~~~~~~~~-~~h 249 (379)
.... +..++ .....+++++.++.++++-..... |.+..-.. ...++..+ ..|
T Consensus 184 npf~~~~i----~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ 258 (354)
T 3a9g_A 184 NPFPNSPI----WSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET 258 (354)
T ss_dssp SSSTTCCE----EEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred CCCCCCcE----EEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC
Confidence 0000 01222 223567788755666665433221 32221100 00122222 122
Q ss_pred cCCeeEEEEc-------cCCCEEEEeeCCCeEEEEECCCC-cee--EEEeeccCCCCCCCeEEEEEccCCCEEEEEE
Q 016974 250 EGDVNTVKFF-------PDGNRFGTGSDDGTCRLFDIRTG-HQL--QVYYQQHGENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 250 ~~~v~~v~~s-------p~g~~l~s~s~D~~i~iwd~~~~-~~~--~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
.....++|. .+|.++++.-..+.|...++... ... ..+.. .....+..+++.|||.+.++..
T Consensus 259 -~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~----~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 -WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK----NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp -CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT----TTSCCEEEEEECTTSCEEEEEC
T ss_pred -cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc----CCCCCeeEEEECCCCcEEEEEe
Confidence 356788883 56777777667778888887653 221 12211 1134578999999997665543
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.50 E-value=0.35 Score=41.56 Aligned_cols=147 Identities=14% Similarity=0.154 Sum_probs=72.3
Q ss_pred CceEEEeeCCC-----eEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-------CcEEEEEccC
Q 016974 171 DTHLITSSGDQ-----TCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-------STARLWDTRV 238 (379)
Q Consensus 171 ~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-------~~i~vwd~~~ 238 (379)
+..++.|+.++ .+.+||+.+......-... ... .. .++... ++++++.|+.+ ..+.+||...
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r-~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN--TRR-SS-VGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS--SCC-BS-CEEEEE--TTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC--Ccc-cC-ceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 45666666543 5778888776543321110 111 11 112222 45677777653 3477888764
Q ss_pred CccceEEEecccC--CeeEEEEccCCCEEEEeeCC-----CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCE
Q 016974 239 ASRAVRTFHGHEG--DVNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRL 311 (379)
Q Consensus 239 ~~~~~~~~~~h~~--~v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~ 311 (379)
.. -..+..-.. .-.++.. -++..++.|+.+ ..+.+||+.+.+-...- ....... .-..+ ..++++
T Consensus 183 ~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~-~~~~~--~~~~~i 254 (302)
T 2xn4_A 183 NE--WTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA--DMNMCRR-NAGVC--AVNGLL 254 (302)
T ss_dssp TE--EEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC--CCSSCCB-SCEEE--EETTEE
T ss_pred Cc--EEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC--CCCCccc-cCeEE--EECCEE
Confidence 31 111111010 1112222 267777888764 36889998875432211 1111111 11222 236777
Q ss_pred EEEEEecC-----cEEEEeCCCceE
Q 016974 312 LFAGYSNG-----DCYVWDTLLAKV 331 (379)
Q Consensus 312 l~sg~~dg-----~i~iwd~~~~~~ 331 (379)
++.|+.++ .+.+||..+.+-
T Consensus 255 ~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 255 YVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEECCcCCCcccccEEEEcCCCCeE
Confidence 77777553 488999876553
No 311
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.43 E-value=0.72 Score=44.42 Aligned_cols=200 Identities=11% Similarity=0.028 Sum_probs=119.7
Q ss_pred ccEEEEEeeCCCCeE-EEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEE-EEeeCCCcEEEEEcCCCCCCC
Q 016974 68 GKVYSLDWTSERNRI-VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPTDKD 145 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~ 145 (379)
..+.+|+|.+.++.| .+-..++.|+.+++........+.........+++.+.+..| .+-...+.|.+.+++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-- 114 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-- 114 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC--
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE--
Confidence 357799999866555 455677899999876544333333333456678888765544 5555567788888764221
Q ss_pred CCcceeeeecccccceEEEEEecCCCceEEEe-eCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEE
Q 016974 146 GNLPVSRMLSGHKGYVSCCQYVPDEDTHLITS-SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVS 224 (379)
Q Consensus 146 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 224 (379)
. ......-.....+++.|..+.++.+- +..+.|...++.......... .......+++++.+++++.+
T Consensus 115 ----~-~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~------~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 115 ----Q-VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP------NVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp ----E-EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC------SCSSEEEEEEETTTTEEEEE
T ss_pred ----E-EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC------CCCCcceEEEccccCEEEEE
Confidence 1 11112223457788888655444443 225667777765443332221 23456788888877778888
Q ss_pred ecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc
Q 016974 225 GSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH 283 (379)
Q Consensus 225 g~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~ 283 (379)
-...+.|...|+..... ..+.........+++.. +..+++-...+.|...|..+++
T Consensus 184 D~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 184 DLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp ETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 78888899998864322 23333334456777754 4445555556777777755443
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.33 E-value=0.52 Score=41.76 Aligned_cols=239 Identities=9% Similarity=0.085 Sum_probs=115.6
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEee-------cCCcceEEEEECCC----CCEEEEeeC-------C
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIK-------LPCAWVMTCAFSPT----GQSVACGGL-------D 130 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~----g~~l~~~~~-------d 130 (379)
.-+.|+|.|+|+.|+.+...|.|++++.. +.....+. ........++|+|+ +.+.++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46789999999834445667999999853 33211111 11234688999995 444444222 1
Q ss_pred CcEEEEEcCCCCCCCCCcc-eeeeec-----ccccceEEEEEecCCCceEEEeeC-------------CCeEEEeecCCC
Q 016974 131 SVCSIFNLNSPTDKDGNLP-VSRMLS-----GHKGYVSCCQYVPDEDTHLITSSG-------------DQTCVLWDITTG 191 (379)
Q Consensus 131 ~~i~iw~~~~~~~~~~~~~-~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~~-------------d~~i~~wd~~~~ 191 (379)
..|..++++.....-.... +...+. .|. -..+.|.|++ .+.++-+. .+.|.-.|....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2455555543210000000 111111 232 2457899976 33333222 235555554321
Q ss_pred eeE-EEe-------cCccccCCccCeEEEEEeCCCCcEEEEecC-CCcEEEEEccCC-----------------------
Q 016974 192 LRT-SVF-------GGEFQSGHTADVLSVSISGSNSRMFVSGSC-DSTARLWDTRVA----------------------- 239 (379)
Q Consensus 192 ~~~-~~~-------~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-d~~i~vwd~~~~----------------------- 239 (379)
... ..+ ...+..++ .....+++++..+.++++-.. ++.=.|.-+...
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 000 000 00011222 235678888756666665322 111112111100
Q ss_pred -------ccceEEEecccCCeeEEEEcc-------CCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEE
Q 016974 240 -------SRAVRTFHGHEGDVNTVKFFP-------DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAF 305 (379)
Q Consensus 240 -------~~~~~~~~~h~~~v~~v~~sp-------~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~f 305 (379)
..++..+..| ..+..+.|.+ +|.++++.-..+.|...++..++...... ........+..+++
T Consensus 254 ~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGR--ILTDRGQRIRDVRT 330 (353)
T ss_dssp BSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEE--ESGGGCCCEEEEEE
T ss_pred CCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEE--cccCCCCceeEEEE
Confidence 0122233323 3567788863 46777776677888888877554332210 00111235889999
Q ss_pred ccCCCEEEEE
Q 016974 306 SISGRLLFAG 315 (379)
Q Consensus 306 s~~g~~l~sg 315 (379)
.|||.+.++.
T Consensus 331 ~pdG~lyv~t 340 (353)
T 2g8s_A 331 GPDGYLYVLT 340 (353)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999865543
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.15 E-value=0.34 Score=44.68 Aligned_cols=110 Identities=14% Similarity=0.081 Sum_probs=63.8
Q ss_pred CCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC---CCCCCCeEEEEEccC---CCEEEEEEe-------
Q 016974 251 GDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG---ENEIPHVTSIAFSIS---GRLLFAGYS------- 317 (379)
Q Consensus 251 ~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~fs~~---g~~l~sg~~------- 317 (379)
...+.++|.|+|+++++-...+.|++++..++.......-... .+....+..++|+|+ +.+|.....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3567999999999777755445788888655543221111110 012345789999996 555555543
Q ss_pred ------cCcEEEEeCCCc-------eEEEe-cccccCCccCceeEEEECCCCCeEEEeeC
Q 016974 318 ------NGDCYVWDTLLA-------KVVLN-LGSLQNSHEGRITCLGLSADGSALCTGSW 363 (379)
Q Consensus 318 ------dg~i~iwd~~~~-------~~~~~-~~~~~~~h~~~v~~~~~s~d~~~l~s~s~ 363 (379)
...|..|+.... +.+.. +.. ...| ....|+|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~~~H--~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-SKDH--QSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-CSSC--CEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-CCCC--CCCeEeECCCCeEEEEECC
Confidence 235666664321 11111 111 1235 3588999999998777543
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.10 E-value=0.63 Score=40.49 Aligned_cols=263 Identities=10% Similarity=0.180 Sum_probs=144.7
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQY 166 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 166 (379)
.+..|.|-|+..+..+....-... +.-.+|..+.+|.-. ..++.|+|++.+. ......- ...|.-=.|
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~Ad---sAIMnP~~~ViALra-g~~LQiFnletK~-------klks~~~-~e~VvfWkW 114 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKS-------KMKAHTM-TDDVTFWKW 114 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCCS---EEEECSSSSEEEEEE-TTEEEEEETTTTE-------EEEEEEC-SSCEEEEEE
T ss_pred CCCEEEEEECCCCCCccccccccc---eeeeCCCccEEEEec-CCeEEEechHHhh-------hhcceec-CCccEEEEe
Confidence 344788889887665433222211 233588888887765 6789999998632 1111111 223444456
Q ss_pred ecCCCceEEEeeCCCeEEEeecCCC-eeEEEecCccccCCccCeEEEEEeCCCCcEEEEec------CCCcEEEEEccCC
Q 016974 167 VPDEDTHLITSSGDQTCVLWDITTG-LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS------CDSTARLWDTRVA 239 (379)
Q Consensus 167 ~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~------~d~~i~vwd~~~~ 239 (379)
.....--|++ +..|.-|++... .....+...... ....|.....++...-++++|- -.|.+.+|...
T Consensus 115 is~~~L~lVT---~taVyHWs~~~~s~P~kvFdR~~~L-~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-- 188 (365)
T 2xzh_A 115 ISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSL-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-- 188 (365)
T ss_dssp CSSSEEEEEE---SSEEEEEESSTTCCCEEEEECCGGG-TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--
T ss_pred cCCCeEEEEc---CCcEEEEcccCCCCCceeeecchhc-ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--
Confidence 5543222333 467999998642 333444322111 1244555566654444444432 23678899876
Q ss_pred ccceEEEecccCCeeEEEEccC---CCEEEEeeC---CCeEEEEECCCC---c------eeEEEeeccCCCCCCCeEEEE
Q 016974 240 SRAVRTFHGHEGDVNTVKFFPD---GNRFGTGSD---DGTCRLFDIRTG---H------QLQVYYQQHGENEIPHVTSIA 304 (379)
Q Consensus 240 ~~~~~~~~~h~~~v~~v~~sp~---g~~l~s~s~---D~~i~iwd~~~~---~------~~~~~~~~~~~~~~~~v~~~~ 304 (379)
+...+.+.||.+....+.+.-+ .+.++-+.. .+.+.|-++... . .+..++.+.. ......++.
T Consensus 189 r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea--~~DFPVamq 266 (365)
T 2xzh_A 189 RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA--QNDFPVAMQ 266 (365)
T ss_dssp TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC--TTCCEEEEE
T ss_pred ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc--cCCceEEEE
Confidence 3456678888665533333211 123333332 257888887432 1 1222222211 122346788
Q ss_pred EccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 305 FSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 305 fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
.|+.-..++.-+.-|.|++||+.++..+..- .-..++|...+-+....-++.....|.|.--.++
T Consensus 267 vs~kygviyviTK~G~ihlyDleTgt~i~~n----rIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 267 ISEKHDVVFLITKYGYIHLYDLETGTCIYMN----RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEE----ECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred ecccCCEEEEEeCCcEEEEEEcccCcEEEEe----ccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 8888889999999999999999998876543 2234455554544444445555566655544433
No 315
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.90 E-value=0.44 Score=42.05 Aligned_cols=110 Identities=15% Similarity=0.140 Sum_probs=65.3
Q ss_pred cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeec-cCCCCCCCeEEEEEccC---CCEEEEEE---ecCcEE
Q 016974 250 EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQ-HGENEIPHVTSIAFSIS---GRLLFAGY---SNGDCY 322 (379)
Q Consensus 250 ~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~~~~~~~v~~~~fs~~---g~~l~sg~---~dg~i~ 322 (379)
-...+.++|.|||.++++--..|.|++++...+......... ...........++|+|+ +.+|+... .++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345789999999998877655899999987655432211110 00111234789999995 44555432 344666
Q ss_pred EEeCCC----------ceEEE-ecccccCCccCceeEEEECCCCCeEEEee
Q 016974 323 VWDTLL----------AKVVL-NLGSLQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 323 iwd~~~----------~~~~~-~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
-|.... .+.+. .+.. ...|.. ..|+|.|||.+.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H~g--~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPK-GVIHNG--GRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECC-CSSCCC--CCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCC-CCCccC--ccccCCCCCCEEEEEC
Confidence 675433 12221 1211 134543 5689999999888754
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.81 E-value=0.78 Score=39.22 Aligned_cols=186 Identities=12% Similarity=0.110 Sum_probs=91.1
Q ss_pred CceEEEeeCC-----CeEEEeecCCCe---eEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCC-----cEEEEEcc
Q 016974 171 DTHLITSSGD-----QTCVLWDITTGL---RTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDS-----TARLWDTR 237 (379)
Q Consensus 171 ~~~l~s~~~d-----~~i~~wd~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~-----~i~vwd~~ 237 (379)
+..++.|+.+ ..+.+||+.+.. ........ ... .. .++... ++++++.|+.++ .+.+||..
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p--~~r-~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~ 136 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN--VRR-GL-AGATTL--GDMIYVSGGFDGSRRHTSMERYDPN 136 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS--SCC-BS-CEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC--CCc-cc-eeEEEE--CCEEEEEcccCCCcccceEEEEcCC
Confidence 4566677654 458888987765 33221110 111 11 112222 456777777543 57778875
Q ss_pred CCccceEEEecc-cCC-eeEEEEccCCCEEEEeeCC-----CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCC
Q 016974 238 VASRAVRTFHGH-EGD-VNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGR 310 (379)
Q Consensus 238 ~~~~~~~~~~~h-~~~-v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~ 310 (379)
... -..+... ... -.++.. -++..++.|+.+ ..+.+||+.+..-... ..... ....-..+. .+++
T Consensus 137 ~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~p~-~r~~~~~~~--~~~~ 208 (301)
T 2vpj_A 137 IDQ--WSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV--TPMAT-KRSGAGVAL--LNDH 208 (301)
T ss_dssp TTE--EEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE--CCCSS-CCBSCEEEE--ETTE
T ss_pred CCe--EEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeC--CCCCc-ccccceEEE--ECCE
Confidence 432 1111111 111 112222 367777887754 3588899877543221 11111 111112222 3677
Q ss_pred EEEEEEec-----CcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC-----cEEEEecCc
Q 016974 311 LLFAGYSN-----GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT-----NLKIWAFGG 374 (379)
Q Consensus 311 ~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~-----~i~vw~~~~ 374 (379)
+++.|+.+ ..+.+||..+.+-... ......... -.++. -++++++.|+.++ .|.+|++..
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~-~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRTDSWTTV-TSMTTPRCY-VGATV--LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBS-CEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred EEEEeCCCCCcccceEEEEeCCCCcEEEC-CCCCCcccc-eeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 77777654 4689999876653322 111111111 12222 2677888887763 466676643
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.73 E-value=1.1 Score=40.45 Aligned_cols=138 Identities=15% Similarity=0.136 Sum_probs=85.8
Q ss_pred CCcEEEEEccCCccceEEEecc----cCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCc------------eeEEEeec
Q 016974 228 DSTARLWDTRVASRAVRTFHGH----EGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGH------------QLQVYYQQ 291 (379)
Q Consensus 228 d~~i~vwd~~~~~~~~~~~~~h----~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~------------~~~~~~~~ 291 (379)
++.||.-++... ...+.+.-- -..|..+..||+|++||..+. ..|.|-.+..+. +...+.-.
T Consensus 40 ~n~iR~~~i~~~-~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTD-SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTC-SSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCC-CcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcC
Confidence 356776666533 234444332 125788999999999988764 578888876321 11122111
Q ss_pred -cCCCCCCCeEEEEEccCC---CEEEEEEecCcEEEEeCCCc--eEEEeccccc-----CCccCceeEEEECCCCCeEEE
Q 016974 292 -HGENEIPHVTSIAFSISG---RLLFAGYSNGDCYVWDTLLA--KVVLNLGSLQ-----NSHEGRITCLGLSADGSALCT 360 (379)
Q Consensus 292 -~~~~~~~~v~~~~fs~~g---~~l~sg~~dg~i~iwd~~~~--~~~~~~~~~~-----~~h~~~v~~~~~s~d~~~l~s 360 (379)
.......+|..+.|+|-| ..|++-.+|+.|++||+... ++. .+.... ......|.+++|++++-.|..
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 111123579999999964 58999999999999998642 111 221110 122357889999998877776
Q ss_pred ee--CCCcEE
Q 016974 361 GS--WDTNLK 368 (379)
Q Consensus 361 ~s--~D~~i~ 368 (379)
.+ ..|-|+
T Consensus 197 l~~t~~GDIY 206 (452)
T 3pbp_A 197 LNTTEGGDIF 206 (452)
T ss_dssp EECTTSCEEE
T ss_pred EecCCCCCEE
Confidence 44 667765
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.70 E-value=0.031 Score=45.63 Aligned_cols=108 Identities=12% Similarity=0.047 Sum_probs=62.7
Q ss_pred CeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee-----EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeC
Q 016974 252 DVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL-----QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDT 326 (379)
Q Consensus 252 ~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~ 326 (379)
.+..++|+|+|.+.+. .+|.+.-.+..+.... .......+-+ .-..+.|.|+|.+.++ .||.|+-++-
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~---~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN---QFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG---GCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc---cceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 6779999999987766 6676666565432110 0111111110 1257899999988877 7799998874
Q ss_pred CCceEEEeccccc---CCccCceeEEEECCCCCeEEEeeCCCcEE
Q 016974 327 LLAKVVLNLGSLQ---NSHEGRITCLGLSADGSALCTGSWDTNLK 368 (379)
Q Consensus 327 ~~~~~~~~~~~~~---~~h~~~v~~~~~s~d~~~l~s~s~D~~i~ 368 (379)
.+.....-+.... ..-=..+..|.|.|+|.+.+.. |+.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 2211000000000 0011357899999999988876 77753
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.67 E-value=1.2 Score=40.37 Aligned_cols=263 Identities=9% Similarity=0.167 Sum_probs=147.5
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeecccccceEEEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQY 166 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 166 (379)
.+..|-|-|+..+..+........ +.-.+|..+.+|--. ..++.|+|++.+. ......-.. .|.-=.|
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~Ad---sAIMnP~~~iiALra-g~~lQiFnle~K~-------klks~~~~e-~VvfWkW 113 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISAD---SAIMNPASKVIALKA-GKTLQIFNIEMKS-------KMKAHTMTD-DVTFWKW 113 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCS---EEEECSSSSCEEEEE-TTEEEEEETTTTE-------EEEEEECSS-CCCEEEE
T ss_pred CCCeEEEEECCCCCcceecccccc---eeeeCCCCcEEEEec-CCeEEEEchHHhh-------hhcceecCC-CceEEEe
Confidence 344788888887665533222211 333688888777765 6789999998532 111111122 3333356
Q ss_pred ecCCCceEEEeeCCCeEEEeecCCC-eeEEEecCccccCCccCeEEEEEeCCCCcEEEEec------CCCcEEEEEccCC
Q 016974 167 VPDEDTHLITSSGDQTCVLWDITTG-LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS------CDSTARLWDTRVA 239 (379)
Q Consensus 167 ~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~------~d~~i~vwd~~~~ 239 (379)
.... .|+- =.+..|.-|++... .....+....... ...|.....++...-++++|- -.|.+.+|...
T Consensus 114 is~~--~l~l-VT~taVyHWsi~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-- 187 (494)
T 1bpo_A 114 ISLN--TVAL-VTDNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-- 187 (494)
T ss_dssp EETT--EEEE-ECSSEEEEEESSSSCCCEEEEECCGGGT-TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--
T ss_pred cCCC--eEEE-EcCCeeEEecccCCCCchhheecchhcc-cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--
Confidence 5543 2222 24578999998642 3344443221111 244556666654444444432 34678899876
Q ss_pred ccceEEEecccCCeeEEEEccC---CCEEEEeeC---CCeEEEEECCCC---------ceeEEEeeccCCCCCCCeEEEE
Q 016974 240 SRAVRTFHGHEGDVNTVKFFPD---GNRFGTGSD---DGTCRLFDIRTG---------HQLQVYYQQHGENEIPHVTSIA 304 (379)
Q Consensus 240 ~~~~~~~~~h~~~v~~v~~sp~---g~~l~s~s~---D~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~v~~~~ 304 (379)
+...+.+.||.+....+.+.-+ .+.++-+.. .+.+.|-++... +.+..++.+.. ......++.
T Consensus 188 r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~--~~DFPvamq 265 (494)
T 1bpo_A 188 RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA--QNDFPVAMQ 265 (494)
T ss_dssp TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS--TTCCEEEEE
T ss_pred ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc--ccCceeEEE
Confidence 3456778888766544443211 123444433 267888887432 11122222111 122356788
Q ss_pred EccCCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecC
Q 016974 305 FSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFG 373 (379)
Q Consensus 305 fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~ 373 (379)
.|+.-..++.-+.-|.|++||+.++..+..- .-...+|...+-+....-++.....|.|.--.++
T Consensus 266 vs~kygviyviTK~G~i~lyDleTgt~i~~n----rIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 266 ISEKHDVVFLITKYGYIHLYDLETGTCIYMN----RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEE----ECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred ecccCCEEEEEecCceEEEEecccceeeeee----cccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 8998889999999999999999998876543 2234456555555555555555566666544443
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.58 E-value=0.98 Score=38.75 Aligned_cols=226 Identities=12% Similarity=0.049 Sum_probs=105.5
Q ss_pred eEEEEcC--CCcEEEEECCCCceeeE--eecCCcceEEEEECCCCCEEEEeeCC----CcEEEEEcCCCCCCCCCcceee
Q 016974 81 RIVSASQ--DGRLIVWNALTSQKTHA--IKLPCAWVMTCAFSPTGQSVACGGLD----SVCSIFNLNSPTDKDGNLPVSR 152 (379)
Q Consensus 81 ~l~s~s~--D~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~ 152 (379)
+++.|+. ...+.++|..+.+-... +......-..+. .++..++.||.+ ..+.+||..... +....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~-----W~~~~ 86 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDS-----WYSKL 86 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTE-----EEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCe-----EEECC
Confidence 3444543 35688888876542211 111111112222 356777777765 456677765421 11111
Q ss_pred eecccccceEEEEEecCCCceEEEeeCC------CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEec
Q 016974 153 MLSGHKGYVSCCQYVPDEDTHLITSSGD------QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGS 226 (379)
Q Consensus 153 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 226 (379)
.+......-.++.+ ++..++.|+.+ ..+.+||+.+......-... ... ..- ++... ++++++.|+
T Consensus 87 ~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r-~~~-~~~~~--~~~iyv~GG 157 (306)
T 3ii7_A 87 GPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML--TQR-CSH-GMVEA--NGLIYVCGG 157 (306)
T ss_dssp CCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS--SCC-BSC-EEEEE--TTEEEEECC
T ss_pred CCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc--CCc-cee-EEEEE--CCEEEEECC
Confidence 11111111111222 34566777655 45888898876543321110 111 111 11122 456777776
Q ss_pred C---------CCcEEEEEccCCccceEEEecccC-C-eeEEEEccCCCEEEEeeCC-----CeEEEEECCCCceeEEEee
Q 016974 227 C---------DSTARLWDTRVASRAVRTFHGHEG-D-VNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQ 290 (379)
Q Consensus 227 ~---------d~~i~vwd~~~~~~~~~~~~~h~~-~-v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~ 290 (379)
. -..+.+||..... -..+..... . -.++.. -+++.++.|+.+ ..+.+||+.+.+-... .
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~-~- 232 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV-S- 232 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEEC-C-
T ss_pred CCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC-C-
Confidence 4 2447788876431 112211111 1 112222 266777777653 3588899887532211 1
Q ss_pred ccCCCCCCCeEEEEEccCCCEEEEEEec-----CcEEEEeCCCce
Q 016974 291 QHGENEIPHVTSIAFSISGRLLFAGYSN-----GDCYVWDTLLAK 330 (379)
Q Consensus 291 ~~~~~~~~~v~~~~fs~~g~~l~sg~~d-----g~i~iwd~~~~~ 330 (379)
.... .......+.+ ++++++.|+.+ ..+.+||..+.+
T Consensus 233 ~~p~-~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 233 PMPW-KGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CCSC-CBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCC-CccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 1101 1111223333 67777777744 468889976654
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.54 E-value=1 Score=40.66 Aligned_cols=115 Identities=17% Similarity=0.238 Sum_probs=74.0
Q ss_pred CeEEEEEeCCCCcEEEEecCCCcEEEEEccCCc-----------cceEEEec------ccCCeeEEEEccC---CCEEEE
Q 016974 208 DVLSVSISGSNSRMFVSGSCDSTARLWDTRVAS-----------RAVRTFHG------HEGDVNTVKFFPD---GNRFGT 267 (379)
Q Consensus 208 ~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~-----------~~~~~~~~------h~~~v~~v~~sp~---g~~l~s 267 (379)
.+..+..+| ++.++|..+. ..|.|-.+.... ...+.+.- ...+|..+.|||- +..|++
T Consensus 67 ~i~qlvlSp-sG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISST-SGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECT-TSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECC-CCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 456677886 5667766543 478888776221 01123322 2467999999995 457999
Q ss_pred eeCCCeEEEEECCCCceeE-EEeec----cCCCCCCCeEEEEEccCCCEEEEEE--ecCcEEEE
Q 016974 268 GSDDGTCRLFDIRTGHQLQ-VYYQQ----HGENEIPHVTSIAFSISGRLLFAGY--SNGDCYVW 324 (379)
Q Consensus 268 ~s~D~~i~iwd~~~~~~~~-~~~~~----~~~~~~~~v~~~~fs~~g~~l~sg~--~dg~i~iw 324 (379)
-..|++|++||+....... .+... ........|.+++|+.+|-.|.... ..|.|+-.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999998632111 11110 0011225689999999988777765 77888853
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.50 E-value=1.3 Score=40.81 Aligned_cols=107 Identities=7% Similarity=0.050 Sum_probs=55.3
Q ss_pred eEEEEEeCCCCcEEEEecCCCcEEEEEccCCcc-ceEEEec------ccCCeeEEEEccC----CCEEEEeeC-------
Q 016974 209 VLSVSISGSNSRMFVSGSCDSTARLWDTRVASR-AVRTFHG------HEGDVNTVKFFPD----GNRFGTGSD------- 270 (379)
Q Consensus 209 v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~-~~~~~~~------h~~~v~~v~~sp~----g~~l~s~s~------- 270 (379)
...+++.+ +++++++-...+.|++++...... .+..+.. .......|+|+|+ +.+.++-+.
T Consensus 29 P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 29 PHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp EEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred ceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45777776 667777665555688776432211 1111111 1234668999994 544454442
Q ss_pred -----CCeEEEEECCCCc----eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE
Q 016974 271 -----DGTCRLFDIRTGH----QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 271 -----D~~i~iwd~~~~~----~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
...|.-|+...+. ....+.........-....++|.|||.+.++-+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345555543321 111222111111112368999999998666543
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.35 E-value=0.26 Score=40.24 Aligned_cols=146 Identities=10% Similarity=0.080 Sum_probs=77.5
Q ss_pred CeEEEEEeCCCCcEEEEecCCCcEEEEEccCCc-----cceEEE-e-cccCCeeEEEEccCCCEEEEeeCCCeEEEEECC
Q 016974 208 DVLSVSISGSNSRMFVSGSCDSTARLWDTRVAS-----RAVRTF-H-GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIR 280 (379)
Q Consensus 208 ~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~-----~~~~~~-~-~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~ 280 (379)
.+..++++| ++.+.+. .+|.+.-.+..+.. ..-..+ . +... ..++.|.|+|.+.++ .||.|.-++..
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 566899998 7777776 56654444432210 011111 1 1122 478999999998877 56888877753
Q ss_pred CCceeEEEee---ccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCce------EEEecccccCCccCceeEEEE
Q 016974 281 TGHQLQVYYQ---QHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAK------VVLNLGSLQNSHEGRITCLGL 351 (379)
Q Consensus 281 ~~~~~~~~~~---~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~------~~~~~~~~~~~h~~~v~~~~~ 351 (379)
+...- .+.. ..+...-..+..+.|+|+|.+-++. ||.++-+...+.. ....++ ......-.-+.|
T Consensus 116 ~~~~~-~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g---~~g~~~yr~l~f 189 (236)
T 1tl2_A 116 QSDTD-NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIG---QGGWDTFKFLFF 189 (236)
T ss_dssp CSTTC-CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEE---SSSGGGEEEEEE
T ss_pred cCCCC-ceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceec---cCCcceEEEEEE
Confidence 31110 0000 0001011247899999999877766 7776544321100 000111 011223344668
Q ss_pred CCCCCeEEEeeCCCcE
Q 016974 352 SADGSALCTGSWDTNL 367 (379)
Q Consensus 352 s~d~~~l~s~s~D~~i 367 (379)
.++|.+.+.. ++.+
T Consensus 190 ~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 190 SSVGTLFGVQ--GGKF 203 (236)
T ss_dssp CTTSCEEEEE--TTEE
T ss_pred CCCCcEEEEe--CCeE
Confidence 9998887765 6643
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.25 E-value=1.5 Score=38.77 Aligned_cols=70 Identities=17% Similarity=0.170 Sum_probs=42.4
Q ss_pred eEEEEEcc-------CCCEEEEEEecCcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEee-CCCcEEEEe
Q 016974 300 VTSIAFSI-------SGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGS-WDTNLKIWA 371 (379)
Q Consensus 300 v~~~~fs~-------~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s-~D~~i~vw~ 371 (379)
...+.|.. +|+++++....+.|...+...++...... +.......+..+++.|||.++++.. .+| +||.
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~r 349 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGR-ILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLK 349 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEE-ESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEE
T ss_pred cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEE-cccCCCCceeEEEECCCCcEEEEEeCCCC--EEEE
Confidence 56677753 57777766677788887766544332211 1122234788999999999776543 334 4554
Q ss_pred c
Q 016974 372 F 372 (379)
Q Consensus 372 ~ 372 (379)
+
T Consensus 350 i 350 (353)
T 2g8s_A 350 V 350 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.13 E-value=1.4 Score=37.71 Aligned_cols=186 Identities=12% Similarity=0.115 Sum_probs=89.7
Q ss_pred CceEEEeeCC-----CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCC-----cEEEEEccCCc
Q 016974 171 DTHLITSSGD-----QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDS-----TARLWDTRVAS 240 (379)
Q Consensus 171 ~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~-----~i~vwd~~~~~ 240 (379)
+..++.|+.+ ..+.+||..+.......... ... .. .++... ++.+++.|+.++ .+.+||.....
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r-~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR--DRR-ST-LGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS--SCC-BS-CEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCC--ccc-cc-eEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 4566677654 35778888776543322111 111 11 112222 456777777553 46677765331
Q ss_pred cceEEEecccC--CeeEEEEccCCCEEEEeeCC-------CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCE
Q 016974 241 RAVRTFHGHEG--DVNTVKFFPDGNRFGTGSDD-------GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRL 311 (379)
Q Consensus 241 ~~~~~~~~h~~--~v~~v~~sp~g~~l~s~s~D-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~ 311 (379)
-..+..-.. .-.+++. -++..++.|+.+ ..+.+||+.+..-... ...... ...-..+. .++++
T Consensus 136 --W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~-r~~~~~~~--~~~~i 207 (302)
T 2xn4_A 136 --WFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI--AEMSTR-RSGAGVGV--LNNLL 207 (302)
T ss_dssp --EEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEE--CCCSSC-CBSCEEEE--ETTEE
T ss_pred --EeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC--CCCccc-cccccEEE--ECCEE
Confidence 111111111 1112222 266677777643 3588899877543221 111111 11112222 36777
Q ss_pred EEEEEec-----CcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC-----cEEEEecCc
Q 016974 312 LFAGYSN-----GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT-----NLKIWAFGG 374 (379)
Q Consensus 312 l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~-----~i~vw~~~~ 374 (379)
++.|+.+ ..+.+||..+.+-.. +.......... ..+. .++++++.|+.++ .|.+|+...
T Consensus 208 yv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~-~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 208 YAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNA-GVCA--VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSC-EEEE--ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccC-eEEE--ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 7777654 368899987654332 11111111111 1222 3678888888764 367777654
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.97 E-value=3.2 Score=43.55 Aligned_cols=224 Identities=11% Similarity=0.254 Sum_probs=118.5
Q ss_pred CCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeeeccc--ccceEEE
Q 016974 87 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGH--KGYVSCC 164 (379)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~h--~~~v~~~ 164 (379)
....|.|-|+..+..+...... .-+.-.+|..+.+|.-. ..++.|+|+..+.. +..| ...|.-=
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~---AdsAIMnP~~~iiALra-g~~lQiFnl~~k~k----------lks~~~~e~VvfW 111 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSK----------MKAHTMTDDVTFW 111 (1630)
T ss_pred CCceEEEEECCCCCCccccccc---chhhccCCCcceEEEec-CCeEEEeehHHhhh----------hcccccCCCceEE
Confidence 3347888888776544221111 11233578777777664 67899999975321 1112 1234333
Q ss_pred EEecCCCceEEEeeCCCeEEEeecCCC-eeEEEecCccccCCccCeEEEEEeCCCCcEEEEe------cCCCcEEEEEcc
Q 016974 165 QYVPDEDTHLITSSGDQTCVLWDITTG-LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG------SCDSTARLWDTR 237 (379)
Q Consensus 165 ~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg------~~d~~i~vwd~~ 237 (379)
.|.....--|+ .+..|..|++... .+...+...... ....|.....++...-++++| ...|.+.+|...
T Consensus 112 kWis~~~l~lV---T~~aVyHW~~~~~s~P~k~fdR~~~L-~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e 187 (1630)
T 1xi4_A 112 KWISLNTVALV---TDNAVYHWSMEGESQPVKMFDRHSSL-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (1630)
T ss_pred EecCCCeeEEE---cCCeEEEeccCCCCccHHHHhcchhc-ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc
Confidence 56543322233 3567999999532 122222111000 123455555555433333333 245788899876
Q ss_pred CCccceEEEecccCCeeEEEEc--cC-CCEEEEeeC---CCeEEEEECCCC---c------eeEEEeeccCCCCCCCeEE
Q 016974 238 VASRAVRTFHGHEGDVNTVKFF--PD-GNRFGTGSD---DGTCRLFDIRTG---H------QLQVYYQQHGENEIPHVTS 302 (379)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s--p~-g~~l~s~s~---D~~i~iwd~~~~---~------~~~~~~~~~~~~~~~~v~~ 302 (379)
. ...+.+.||.+....+... +. ...++.+.. .+.+.|-++... . .+..++.+... .....+
T Consensus 188 r--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~--~Dfpv~ 263 (1630)
T 1xi4_A 188 R--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ--NDFPVA 263 (1630)
T ss_pred c--ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccc--cCcceE
Confidence 3 3455667887655444432 11 223332222 267888887442 1 11111111111 122356
Q ss_pred EEEccCCCEEEEEEecCcEEEEeCCCceEE
Q 016974 303 IAFSISGRLLFAGYSNGDCYVWDTLLAKVV 332 (379)
Q Consensus 303 ~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~ 332 (379)
+..|+.-..+..-+.-|.|+++|+.++..+
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccchhh
Confidence 777888888888899999999999887654
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.79 E-value=1.7 Score=37.24 Aligned_cols=146 Identities=12% Similarity=0.105 Sum_probs=70.1
Q ss_pred CceEEEeeCC-----CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC-----CcEEEEEccCCc
Q 016974 171 DTHLITSSGD-----QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD-----STARLWDTRVAS 240 (379)
Q Consensus 171 ~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-----~~i~vwd~~~~~ 240 (379)
+..++.|+.+ ..+.+||+.+.......... ... .. .+.... ++.+++.|+.+ ..+.+||.....
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r-~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML--TRR-IG-VGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCS--SCC-BS-CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCC--ccc-cc-eEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 4556666543 35778888776433221110 111 11 112222 45677777764 357788875431
Q ss_pred cceEEEec--ccCCeeEEEEccCCCEEEEeeCC-----CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEE
Q 016974 241 RAVRTFHG--HEGDVNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLF 313 (379)
Q Consensus 241 ~~~~~~~~--h~~~v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~ 313 (379)
-..+.. ..-.-.++... ++..++.|+.+ ..+.+||+.+.+-...- .... .......+. .++++++
T Consensus 196 --W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~-~r~~~~~~~--~~~~i~v 267 (308)
T 1zgk_A 196 --WRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVA--PMKH-RRSALGITV--HQGRIYV 267 (308)
T ss_dssp --EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECC--CCSS-CCBSCEEEE--ETTEEEE
T ss_pred --EeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECC--CCCC-CccceEEEE--ECCEEEE
Confidence 111110 00011122222 67777888764 46889998875422111 1101 001112222 3677777
Q ss_pred EEEec-----CcEEEEeCCCce
Q 016974 314 AGYSN-----GDCYVWDTLLAK 330 (379)
Q Consensus 314 sg~~d-----g~i~iwd~~~~~ 330 (379)
.|+.+ ..+.+||..+.+
T Consensus 268 ~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 268 LGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ECCBCSSCBCCEEEEEETTTTE
T ss_pred EcCcCCCcccceEEEEcCCCCE
Confidence 77644 357788876554
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.69 E-value=3.6 Score=40.43 Aligned_cols=287 Identities=11% Similarity=0.041 Sum_probs=143.5
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCc
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNL 148 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 148 (379)
.|.++...++++.|..|+. +-+..+|..+++...........|.++...++|.+.+.. .+ -+.+++..... .
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~~~~~~~-----~ 263 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DN-GLYVYHNDTTP-----L 263 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TT-EEEEECCTTSC-----C
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CC-ceeEEecCCCc-----E
Confidence 4788877776665444553 458888877654332222233457788888888776654 34 46666654311 1
Q ss_pred ceeeee-----cccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEE
Q 016974 149 PVSRML-----SGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFV 223 (379)
Q Consensus 149 ~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 223 (379)
...... .-....|.++....++ .|-.|+..| +.+.......................|.++.... ++.+.+
T Consensus 264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~-~g~lWi 339 (758)
T 3ott_A 264 QHIIHDSRNIQSLTNNIIWNIFADQEH--NIWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDS-KGFYWF 339 (758)
T ss_dssp EEECCCTTCTTSCSCSCEEEEEECTTC--CEEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECT-TCCEEE
T ss_pred EEEEcCCCCcCcCCcCeEEEEEEcCCC--CEEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcC-CCCEEE
Confidence 000000 0012357766554433 344455555 4444322111111100000011223577776654 555555
Q ss_pred EecCCCcEEEEEccCCc-cceEEEec-------ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccCCC
Q 016974 224 SGSCDSTARLWDTRVAS-RAVRTFHG-------HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 224 sg~~d~~i~vwd~~~~~-~~~~~~~~-------h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
|+.+| +..++..... .....+.. ....|.++.-.++|...+ |+ ++-+..+|..+++.. .+.......
T Consensus 340 -Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~-~~~~~~~~~ 414 (758)
T 3ott_A 340 -GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFI-HYNIVDNTG 414 (758)
T ss_dssp -EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEE-EEEEECCC-
T ss_pred -eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEE-EeecCCCcC
Confidence 34444 5555543211 11112210 123588888877887554 44 457889998776432 222111110
Q ss_pred --CCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCc-----eEEE---ecccccCCccCceeEEEECCCCCeEEEeeCCC
Q 016974 296 --EIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLA-----KVVL---NLGSLQNSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 296 --~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~-----~~~~---~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
....|.++..+.+|. |-.|+..+-|.++|.... +... .......-....|.++...++|...+.++..+
T Consensus 415 ~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~ 493 (758)
T 3ott_A 415 TYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNK 493 (758)
T ss_dssp -CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCS
T ss_pred CCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCC
Confidence 123588888887776 445766667899985421 1111 11101011223589999999999776333334
Q ss_pred cEEEEecC
Q 016974 366 NLKIWAFG 373 (379)
Q Consensus 366 ~i~vw~~~ 373 (379)
-|..++..
T Consensus 494 Gl~~~d~~ 501 (758)
T 3ott_A 494 GIDKINPR 501 (758)
T ss_dssp SEEEEETT
T ss_pred CcEEEeCC
Confidence 45566643
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.24 E-value=2.3 Score=36.31 Aligned_cols=186 Identities=12% Similarity=0.178 Sum_probs=91.3
Q ss_pred CceEEEeeCC----CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCC------CcEEEEEccCCc
Q 016974 171 DTHLITSSGD----QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCD------STARLWDTRVAS 240 (379)
Q Consensus 171 ~~~l~s~~~d----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d------~~i~vwd~~~~~ 240 (379)
+..++.|+.+ ..+.+||+.+......-... ... .. .++... ++++++.|+.+ ..+.+||.....
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r-~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP--TPR-DS-LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS--SCC-BS-CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC--ccc-cc-eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 4566777654 56888898877543322111 111 11 111122 45677777765 457888876431
Q ss_pred cceEEEeccc-CC-eeEEEEccCCCEEEEeeC---------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCC
Q 016974 241 RAVRTFHGHE-GD-VNTVKFFPDGNRFGTGSD---------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISG 309 (379)
Q Consensus 241 ~~~~~~~~h~-~~-v~~v~~sp~g~~l~s~s~---------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g 309 (379)
-..+..-. .. -.++.. -++..++.|+. -..+.+||+.+..-... . ..... ...-..+. .++
T Consensus 130 --W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~-~-~~p~~-r~~~~~~~--~~~ 201 (306)
T 3ii7_A 130 --WHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL-C-PMIEA-RKNHGLVF--VKD 201 (306)
T ss_dssp --EEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE-C-CCSSC-CBSCEEEE--ETT
T ss_pred --eEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC-C-Cccch-hhcceEEE--ECC
Confidence 11111100 11 112222 36677777764 24588999887642221 1 11111 11112222 267
Q ss_pred CEEEEEEec-----CcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeCC-----CcEEEEecCc
Q 016974 310 RLLFAGYSN-----GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD-----TNLKIWAFGG 374 (379)
Q Consensus 310 ~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D-----~~i~vw~~~~ 374 (379)
++++.|+.+ ..+.+||..+.+-.. +....... ....++.+ ++++++.|+.+ ..+.+|+...
T Consensus 202 ~i~v~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNVEYYDIKLNEWKM-VSPMPWKG-VTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEECCEETTEEBCCEEEEETTTTEEEE-CCCCSCCB-SCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred EEEEEeCCCCCCCCceEEEeeCCCCcEEE-CCCCCCCc-cceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 777777654 368899987654332 22111111 11222333 67788888865 4567777654
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.81 E-value=4.2 Score=34.86 Aligned_cols=224 Identities=10% Similarity=0.074 Sum_probs=103.6
Q ss_pred eEEEEcCCCcEEEEECCCCceeeEeec--CCcceEEEEECCCCCEEEEeeC-----C--C----cEEEEEcCCCC-CCCC
Q 016974 81 RIVSASQDGRLIVWNALTSQKTHAIKL--PCAWVMTCAFSPTGQSVACGGL-----D--S----VCSIFNLNSPT-DKDG 146 (379)
Q Consensus 81 ~l~s~s~D~~v~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~~~-----d--~----~i~iw~~~~~~-~~~~ 146 (379)
+++.|+ ..+.+||..+.+-.. ... +.......+...++..++.||. . . .+.+||..... ....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344555 568899988766332 222 2122233334567788888874 1 1 14556654321 0000
Q ss_pred CcceeeeecccccceEEEEEecCCCceEEEeeCC--------CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCC
Q 016974 147 NLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD--------QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSN 218 (379)
Q Consensus 147 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 218 (379)
..+..+ .+|. .+.+ ++..++.|+.+ ..+.+||+.+..-...-.. .... .. .++... +
T Consensus 84 ~~p~~r--~~~~----~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r-~~-~~~~~~--~ 148 (315)
T 4asc_A 84 PLPSPR--CLFG----LGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL--PYVV-YG-HTVLSH--M 148 (315)
T ss_dssp CBSSCE--ESCE----EEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC--SSCC-BS-CEEEEE--T
T ss_pred CCCcch--hcee----EEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC--CCcc-cc-eeEEEE--C
Confidence 111111 1221 1122 34556666632 4588889887643322110 0111 11 111222 4
Q ss_pred CcEEEEecC-C-----CcEEEEEccCCccceEEEeccc-CC-eeEEEEccCCCEEEEeeCCC-----eEEEEECCCCcee
Q 016974 219 SRMFVSGSC-D-----STARLWDTRVASRAVRTFHGHE-GD-VNTVKFFPDGNRFGTGSDDG-----TCRLFDIRTGHQL 285 (379)
Q Consensus 219 ~~~l~sg~~-d-----~~i~vwd~~~~~~~~~~~~~h~-~~-v~~v~~sp~g~~l~s~s~D~-----~i~iwd~~~~~~~ 285 (379)
+++++.|+. + ..+.+||..... -..+..-. .. -.++.. -+++.++.|+.++ .+.+||+.+.+-.
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCe--EEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 567777776 2 357888876431 11111100 11 112222 2667778887654 5888998876422
Q ss_pred EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC--------------cEEEEeCCCce
Q 016974 286 QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG--------------DCYVWDTLLAK 330 (379)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg--------------~i~iwd~~~~~ 330 (379)
..- .... .......+. .++++++.|+.++ .+.+||..+.+
T Consensus 226 ~~~--~~p~-~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 226 PFE--AFPQ-ERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEC--CCSS-CCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred ECC--CCCC-cccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 211 1111 011112222 3667777776532 46788876654
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.81 E-value=4.2 Score=34.79 Aligned_cols=186 Identities=11% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCCeEEEEcC----C-----CcEEEEECCCCceeeE--eecCCcceEEEEECCCCCEEEEeeCC-----CcEEEEEcCCC
Q 016974 78 ERNRIVSASQ----D-----GRLIVWNALTSQKTHA--IKLPCAWVMTCAFSPTGQSVACGGLD-----SVCSIFNLNSP 141 (379)
Q Consensus 78 ~~~~l~s~s~----D-----~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~d-----~~i~iw~~~~~ 141 (379)
++.+++.|+. + ..+.++|..+.+-... +......-..+.+ ++++++.||.+ ..+.+||+...
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5666677765 2 4688888876542221 1111111122222 56777777754 34667776542
Q ss_pred CCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCC-----CeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC
Q 016974 142 TDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGD-----QTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG 216 (379)
Q Consensus 142 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 216 (379)
. +.....+......-.++.+ ++..++.|+.+ ..+..||+.+......-.. ... .... ++...
T Consensus 148 ~-----W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~-r~~~-~~~~~- 214 (308)
T 1zgk_A 148 E-----WHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM--NTI-RSGA-GVCVL- 214 (308)
T ss_dssp E-----EEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC--SSC-CBSC-EEEEE-
T ss_pred e-----EeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC--CCc-cccc-eEEEE-
Confidence 1 1110001111111112222 34566666654 4578889877643322110 011 1111 12222
Q ss_pred CCCcEEEEecCC-----CcEEEEEccCCccceEEEecccC--CeeEEEEccCCCEEEEeeCC-----CeEEEEECCCC
Q 016974 217 SNSRMFVSGSCD-----STARLWDTRVASRAVRTFHGHEG--DVNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTG 282 (379)
Q Consensus 217 ~~~~~l~sg~~d-----~~i~vwd~~~~~~~~~~~~~h~~--~v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~ 282 (379)
++++++.|+.+ ..+.+||+.... -..+..-.. .-.++.. -++..++.|+.+ ..+.+||+.+.
T Consensus 215 -~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 215 -HNCIYAAGGYDGQDQLNSVERYDVETET--WTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp -TTEEEEECCBCSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred -CCEEEEEeCCCCCCccceEEEEeCCCCc--EEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 55677888765 458888876431 111111000 0112222 256677777644 34667776654
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.65 E-value=4.8 Score=35.16 Aligned_cols=28 Identities=7% Similarity=0.092 Sum_probs=17.3
Q ss_pred cCCCEEEEeeCCC------eEEEEECCCCceeEE
Q 016974 260 PDGNRFGTGSDDG------TCRLFDIRTGHQLQV 287 (379)
Q Consensus 260 p~g~~l~s~s~D~------~i~iwd~~~~~~~~~ 287 (379)
.+++.++.|+.++ .+.++++.+++.+..
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 4677888888543 355567777665544
No 333
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.37 E-value=3.3 Score=38.13 Aligned_cols=113 Identities=15% Similarity=0.074 Sum_probs=61.7
Q ss_pred CCeeEEEEccCCC-EEEEeeCCCeEEEEECCCCc---eeEEEeeccCC----CCCCCeEEEEEccC---CCEEEEE-Eec
Q 016974 251 GDVNTVKFFPDGN-RFGTGSDDGTCRLFDIRTGH---QLQVYYQQHGE----NEIPHVTSIAFSIS---GRLLFAG-YSN 318 (379)
Q Consensus 251 ~~v~~v~~sp~g~-~l~s~s~D~~i~iwd~~~~~---~~~~~~~~~~~----~~~~~v~~~~fs~~---g~~l~sg-~~d 318 (379)
...+.|+|.|+|. .|+.+...|.|++++..... .+..+...... ........++|+|+ ..+|+.. +.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467899999996 34445678999999753221 11111100000 11235789999996 3344433 221
Q ss_pred ------------CcEEEEeCCC----------ceEEEecccccCCccCceeEEEECCCCCeEEEeeCCC
Q 016974 319 ------------GDCYVWDTLL----------AKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 319 ------------g~i~iwd~~~----------~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
..|.-|.... .+.+..+......|. -..|+|.|||.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeCCCC
Confidence 1344465421 233333321223464 47899999998877755543
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.69 E-value=7.3 Score=33.30 Aligned_cols=135 Identities=10% Similarity=0.065 Sum_probs=64.8
Q ss_pred CCcEEEEecCC--------CcEEEEEccCCccceEEEecc-cCC-eeEEEEccCCCEEEEeeC-C-----CeEEEEECCC
Q 016974 218 NSRMFVSGSCD--------STARLWDTRVASRAVRTFHGH-EGD-VNTVKFFPDGNRFGTGSD-D-----GTCRLFDIRT 281 (379)
Q Consensus 218 ~~~~l~sg~~d--------~~i~vwd~~~~~~~~~~~~~h-~~~-v~~v~~sp~g~~l~s~s~-D-----~~i~iwd~~~ 281 (379)
++.+++.|+.+ ..+.+||..... -..+..- ... -.+++. -+++.++.|+. + ..+.+||+.+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 45677777742 357788876431 1111110 011 112222 46677777776 2 3688899887
Q ss_pred CceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC-----cEEEEeCCCceEEEecccccCCccCceeEEEECCCCC
Q 016974 282 GHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG-----DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGS 356 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~ 356 (379)
..-... ..... ....-..+. .++++++.|+.++ .+.+||..+.+-... ......... -.++. -+++
T Consensus 175 ~~W~~~--~~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~-~~~~~--~~~~ 245 (315)
T 4asc_A 175 FEWKEL--APMQT-ARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF-EAFPQERSS-LSLVS--LVGT 245 (315)
T ss_dssp TEEEEC--CCCSS-CCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE-CCCSSCCBS-CEEEE--ETTE
T ss_pred CeEEEC--CCCCC-chhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEEC-CCCCCcccc-eeEEE--ECCE
Confidence 532211 11111 011112222 3677777777654 588899876543322 111111111 12222 2667
Q ss_pred eEEEeeCC
Q 016974 357 ALCTGSWD 364 (379)
Q Consensus 357 ~l~s~s~D 364 (379)
+++.|+.+
T Consensus 246 l~v~GG~~ 253 (315)
T 4asc_A 246 LYAIGGFA 253 (315)
T ss_dssp EEEEEEEE
T ss_pred EEEECCcc
Confidence 78878764
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.99 E-value=9.2 Score=33.33 Aligned_cols=195 Identities=13% Similarity=0.159 Sum_probs=108.1
Q ss_pred eeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeee
Q 016974 75 WTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRML 154 (379)
Q Consensus 75 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 154 (379)
.+|..+.||-=. ..+++|+|+++.++++...... .|.--.|-.+..+-+. . +..+.-|++..... ..+.+
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~lV-T-~taVyHWs~~~~s~------P~kvF 143 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-T-DNAVYHWSMEGESQ------PVKMF 143 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSSEEEEE-E-SSEEEEEESSTTCC------CEEEE
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCCeEEEE-c-CCcEEEEcccCCCC------Cceee
Confidence 466666666544 6789999999999988887753 4555566544433222 2 34688999875221 12222
Q ss_pred cccc----cceEEEEEecCCCceEE-Eee------CCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeC--CCCcE
Q 016974 155 SGHK----GYVSCCQYVPDEDTHLI-TSS------GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISG--SNSRM 221 (379)
Q Consensus 155 ~~h~----~~v~~~~~~~~~~~~l~-s~~------~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~ 221 (379)
.-|. ..|..-...++. ++++ .|- -.|.+.+|..+.+. ...+ .+|.+....+.... ....+
T Consensus 144 dR~~~L~~~QIInY~~d~~~-kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~i-----eGhaa~F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI-----EGHAASFAQFKMEGNAEESTL 216 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTS-CEEEEEEEEEETTEEEEEEEEEETTTTE-EEEE-----CCSEEEEEEECCTTCSSCEEE
T ss_pred ecchhcccceEEEEEECCCC-CEEEEEeEeccCCccceeEEEEeecccc-ccee-----eeeeeeeEEEecCCCCCCceE
Confidence 2221 233333334433 3433 222 24678888887653 2333 35544333332221 11223
Q ss_pred EEEecC---CCcEEEEEccCC--cc------ceEEEec---ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeE
Q 016974 222 FVSGSC---DSTARLWDTRVA--SR------AVRTFHG---HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQ 286 (379)
Q Consensus 222 l~sg~~---d~~i~vwd~~~~--~~------~~~~~~~---h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~ 286 (379)
|+-+.. .+.+++-++... .. .+..+-. -.+-.-++..|+.-..+..-..-|.|.+||++++..+.
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 295 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEE
Confidence 332222 257888887433 11 1111111 12234567888877788888999999999999998764
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.83 E-value=15 Score=35.64 Aligned_cols=199 Identities=11% Similarity=0.096 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCC----CcEEEEECCCCceeeEe-e-----cC--CcceEEEEECCCCCEEEEeeCCC------cEEEEEc
Q 016974 77 SERNRIVSASQD----GRLIVWNALTSQKTHAI-K-----LP--CAWVMTCAFSPTGQSVACGGLDS------VCSIFNL 138 (379)
Q Consensus 77 ~~~~~l~s~s~D----~~v~iwd~~~~~~~~~~-~-----~~--~~~v~~~~~s~~g~~l~~~~~d~------~i~iw~~ 138 (379)
.++..++.|+.+ ..+.++|..+++-...- . .+ ...-..+.+..+++.++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777754 46888888766533221 1 11 11122333333777888887543 3566666
Q ss_pred CCCC-CCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCC--eEEEeecCCCeeEEEecCccccCCccCeEEEEEe
Q 016974 139 NSPT-DKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQ--TCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS 215 (379)
Q Consensus 139 ~~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 215 (379)
.... ......+. ...+|. +.... ++..++.|+.++ .+.+||..+....................++.+.
T Consensus 476 ~t~~W~~~~~~p~--~R~~h~-----~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 476 KTREWSMIKSLSH--TRFRHS-----ACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp TTTEEEECCCCSB--CCBSCE-----EEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred CCCcEEECCCCCC--Ccccce-----EEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 5421 00001111 011221 22222 345677776654 6888998876543322100000011111223344
Q ss_pred CCCCcEEEEecC--C-----CcEEEEEccCCcc--c--eEEEec--ccCC-eeEEEEccCCCEEEEeeCC--------Ce
Q 016974 216 GSNSRMFVSGSC--D-----STARLWDTRVASR--A--VRTFHG--HEGD-VNTVKFFPDGNRFGTGSDD--------GT 273 (379)
Q Consensus 216 ~~~~~~l~sg~~--d-----~~i~vwd~~~~~~--~--~~~~~~--h~~~-v~~v~~sp~g~~l~s~s~D--------~~ 273 (379)
...+++++.|+. + ..+.+||+....- . -..+.. .... -.++....++..++.|+.+ ..
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 333667777876 2 3578888775430 0 111111 1111 1233333347777777743 35
Q ss_pred EEEEECCCCc
Q 016974 274 CRLFDIRTGH 283 (379)
Q Consensus 274 i~iwd~~~~~ 283 (379)
+.+||+.+..
T Consensus 628 v~~yd~~t~~ 637 (695)
T 2zwa_A 628 IISLDPLSET 637 (695)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCe
Confidence 7888887653
No 337
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.70 E-value=9 Score=32.84 Aligned_cols=139 Identities=12% Similarity=0.101 Sum_probs=70.2
Q ss_pred EeCCCCcEEEEe-cCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeC-CCeEEEEECCCCceeEEEeec
Q 016974 214 ISGSNSRMFVSG-SCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSD-DGTCRLFDIRTGHQLQVYYQQ 291 (379)
Q Consensus 214 ~~~~~~~~l~sg-~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~-D~~i~iwd~~~~~~~~~~~~~ 291 (379)
+++.+..++.+- +.++.-.|+-+.........+..+.. .+|+|+++.|.-.+. ...|..-++..+... .+..
T Consensus 111 ~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l~~- 184 (302)
T 3s25_A 111 ASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LFYD- 184 (302)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EEEC-
T ss_pred EEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EEeC-
Confidence 333344444444 23444445544333333344444432 456788888875554 567888887665433 2221
Q ss_pred cCCCCCCCeEEEEEccCCCEEEEEEecC--cEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEeeC--CCcE
Q 016974 292 HGENEIPHVTSIAFSISGRLLFAGYSNG--DCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSW--DTNL 367 (379)
Q Consensus 292 ~~~~~~~~v~~~~fs~~g~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~--D~~i 367 (379)
+ .. ...++|++.+|+-...++ .|..=++..... ..+. +..+ ..|+|++..|.-++. .+.|
T Consensus 185 -~-----~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt------~~~~--~~~~~~g~~Iy~~~~~~~~~i 248 (302)
T 3s25_A 185 -C-----NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT------EANI--EHYNVYGSLIFYQRGGDNPAL 248 (302)
T ss_dssp -S-----CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS------CSCE--EEEEEETTEEEEEECSSSCEE
T ss_pred -C-----Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe------CCCc--ceEEECCCEEEEEECCCCcEE
Confidence 1 12 234679999888765443 455555543332 2221 1122 236677777765432 2344
Q ss_pred EEEecCc
Q 016974 368 KIWAFGG 374 (379)
Q Consensus 368 ~vw~~~~ 374 (379)
..=++++
T Consensus 249 ~~~~~DG 255 (302)
T 3s25_A 249 CVVKNDG 255 (302)
T ss_dssp EEEETTS
T ss_pred EEEECCC
Confidence 4445554
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.46 E-value=1.9 Score=40.37 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=50.9
Q ss_pred cCCeeEEEEccCCCEEEEee-CCCeEEEEECCCCce-----e----EEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC
Q 016974 250 EGDVNTVKFFPDGNRFGTGS-DDGTCRLFDIRTGHQ-----L----QVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG 319 (379)
Q Consensus 250 ~~~v~~v~~sp~g~~l~s~s-~D~~i~iwd~~~~~~-----~----~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg 319 (379)
....+.+.++|||++++.++ -+.++.++|.++-.. + ..... ..+-.. .....+|+++|.-..+-.-|.
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~a-e~e~Gl-GPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVG-EPELGL-GPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEE-CCBCCS-CEEEEEECSSSEEEEEETTTT
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEe-eccCCC-cccEEEECCCCceEeeeeecc
Confidence 34567899999999987766 588999999874211 0 00000 111112 346789999995555556899
Q ss_pred cEEEEeCCC
Q 016974 320 DCYVWDTLL 328 (379)
Q Consensus 320 ~i~iwd~~~ 328 (379)
.|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999744
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.94 E-value=23 Score=34.32 Aligned_cols=156 Identities=10% Similarity=0.085 Sum_probs=75.6
Q ss_pred CceEEEeeCC----CeEEEeecCCCeeEEEe-cC---ccccCCccCeEEEEEeCCCCcEEEEecCCC------cEEEEEc
Q 016974 171 DTHLITSSGD----QTCVLWDITTGLRTSVF-GG---EFQSGHTADVLSVSISGSNSRMFVSGSCDS------TARLWDT 236 (379)
Q Consensus 171 ~~~l~s~~~d----~~i~~wd~~~~~~~~~~-~~---~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~------~i~vwd~ 236 (379)
+..++.|+.+ ..+.+||..++...... .. ...... .. .++.....++.+++.|+.++ .+.+||.
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R-~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR-MC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC-BS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc-cc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4566666643 45778888776443322 10 000000 01 12222211556777777543 4677777
Q ss_pred cCCccceEEEec--ccCCeeEEEEccCCCEEEEeeCCC--eEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccC-CCE
Q 016974 237 RVASRAVRTFHG--HEGDVNTVKFFPDGNRFGTGSDDG--TCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSIS-GRL 311 (379)
Q Consensus 237 ~~~~~~~~~~~~--h~~~v~~v~~sp~g~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~-g~~ 311 (379)
.... -..+.. ..-.-.+++...++..++.|+.++ .+.+||+.+..-...-...........-..+.+..+ +++
T Consensus 476 ~t~~--W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTRE--WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTE--EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCc--EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 6421 111110 001112333324788888888655 689999887542211100000001111233555555 666
Q ss_pred EEEEEe--c-----CcEEEEeCCCce
Q 016974 312 LFAGYS--N-----GDCYVWDTLLAK 330 (379)
Q Consensus 312 l~sg~~--d-----g~i~iwd~~~~~ 330 (379)
++.|+. + ..+.+||..+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 677765 2 358899976654
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.86 E-value=15 Score=31.94 Aligned_cols=61 Identities=11% Similarity=0.178 Sum_probs=30.8
Q ss_pred CCCeEEEEcCC-CcEEEEECCCC-ceeeEee-cC---CcceEEEEECCCCCEEEEeeC-C---------CcEEEEEcCC
Q 016974 78 ERNRIVSASQD-GRLIVWNALTS-QKTHAIK-LP---CAWVMTCAFSPTGQSVACGGL-D---------SVCSIFNLNS 140 (379)
Q Consensus 78 ~~~~l~s~s~D-~~v~iwd~~~~-~~~~~~~-~~---~~~v~~~~~s~~g~~l~~~~~-d---------~~i~iw~~~~ 140 (379)
++.+++.|+.+ ..+.++|..+. ..-..+. .+ ...-.++.+ ++++++.||. + ..+.+||...
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 55666666543 46888888641 1111111 11 111122222 5677777776 2 3467777654
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.57 E-value=4.2 Score=35.60 Aligned_cols=114 Identities=10% Similarity=0.112 Sum_probs=61.9
Q ss_pred EEEEecCCCcEEEEEccCCccceEEEecc-cCCeeEEEE--cc-CCCEEEEe-eCCCeEEEEECCCCceeEEEeeccCCC
Q 016974 221 MFVSGSCDSTARLWDTRVASRAVRTFHGH-EGDVNTVKF--FP-DGNRFGTG-SDDGTCRLFDIRTGHQLQVYYQQHGEN 295 (379)
Q Consensus 221 ~l~sg~~d~~i~vwd~~~~~~~~~~~~~h-~~~v~~v~~--sp-~g~~l~s~-s~D~~i~iwd~~~~~~~~~~~~~~~~~ 295 (379)
+++.++.||.|.-.|..+. +..-.+... ..++....- .+ ++..++.. +.||.+..+|..+|.....+......
T Consensus 12 ~V~v~t~dG~l~Ald~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv- 89 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNG-HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV- 89 (339)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH-
T ss_pred EEEEEeCCCeEEEEECCCC-cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce-
Confidence 5566777777777776544 333333322 112211110 01 23334343 68999999998887543222211100
Q ss_pred CCCCeEE----EEEc----cCCCEEEEEEecCcEEEEeCCCceEEEecc
Q 016974 296 EIPHVTS----IAFS----ISGRLLFAGYSNGDCYVWDTLLAKVVLNLG 336 (379)
Q Consensus 296 ~~~~v~~----~~fs----~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~ 336 (379)
...++.. +... ..+..+++|+.+|.++..|..+++.+..+.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1111111 0000 145688899999999999999999988764
No 342
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=86.53 E-value=19 Score=32.79 Aligned_cols=197 Identities=14% Similarity=0.179 Sum_probs=108.9
Q ss_pred EeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeee
Q 016974 74 DWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRM 153 (379)
Q Consensus 74 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~ 153 (379)
-.+|..+.||-=. ..+++|+|+++.++++....+.. |.--.|-.+. .|+-.. +..|.-|++..... ..+.
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~-VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~------P~kv 141 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLN-TVALVT-DNAVYHWSMEGESQ------PVKM 141 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC-CCEEEEEETT-EEEEEC-SSEEEEEESSSSCC------CEEE
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC-ceEEEecCCC-eEEEEc-CCeeEEecccCCCC------chhh
Confidence 3466666666543 78999999999998888776543 3333443332 233222 45688999865221 2222
Q ss_pred ecccc----cceEEEEEecCCCceEE-Eee------CCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC--CCc
Q 016974 154 LSGHK----GYVSCCQYVPDEDTHLI-TSS------GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS--NSR 220 (379)
Q Consensus 154 ~~~h~----~~v~~~~~~~~~~~~l~-s~~------~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~ 220 (379)
+.-|. ..|..-...++. ++++ .|- -.|.+.+|..+.+. ...+ .+|.+...++..... ...
T Consensus 142 FdR~~~L~~~QIInY~~d~~~-kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~i-----eGhaa~F~~~~~~g~~~~~~ 214 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI-----EGHAASFAQFKMEGNAEEST 214 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTS-SEEEEEEEEEETTEEEEEEEEEESTTCC-EEEE-----CCSEEEEEEEECTTCSSEEE
T ss_pred eecchhcccceEEEEEECCCC-CeEEEEeecccCCcccceEEEeeccccc-cchh-----eeeeeeeEEEecCCCCCCce
Confidence 22221 233333344443 3433 222 24678888887653 2233 456544444433221 112
Q ss_pred EEEEecC---CCcEEEEEccCC--c------cceEEEe---cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeE
Q 016974 221 MFVSGSC---DSTARLWDTRVA--S------RAVRTFH---GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQ 286 (379)
Q Consensus 221 ~l~sg~~---d~~i~vwd~~~~--~------~~~~~~~---~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~ 286 (379)
+|+-+.. .+.+++-++... . +.+..+- .-.+---++..|+.-..+..-..-|.|.++|+.++..+.
T Consensus 215 lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 215 LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp EEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeee
Confidence 3433332 267888887533 1 1111111 112234578888887888888999999999999998764
Q ss_pred E
Q 016974 287 V 287 (379)
Q Consensus 287 ~ 287 (379)
.
T Consensus 295 ~ 295 (494)
T 1bpo_A 295 M 295 (494)
T ss_dssp E
T ss_pred e
Confidence 3
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=85.30 E-value=42 Score=35.64 Aligned_cols=198 Identities=13% Similarity=0.125 Sum_probs=100.1
Q ss_pred eeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCCcceeeee
Q 016974 75 WTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRML 154 (379)
Q Consensus 75 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 154 (379)
.+|..+.||-= ...+++|+|+.+.+++++...+. .|.--.|-..... +-.+ +..|.-|++.....+..-......+
T Consensus 73 MnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~l-~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 73 MNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTV-ALVT-DNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred cCCCcceEEEe-cCCeEEEeehHHhhhhcccccCC-CceEEEecCCCee-EEEc-CCeEEEeccCCCCccHHHHhcchhc
Confidence 34555555544 37899999999888877766543 3444455433332 2222 3468999996522111000001111
Q ss_pred cccccceEEEEEecCCCceEE-Ee------eCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe--CCCCcEEEEe
Q 016974 155 SGHKGYVSCCQYVPDEDTHLI-TS------SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS--GSNSRMFVSG 225 (379)
Q Consensus 155 ~~h~~~v~~~~~~~~~~~~l~-s~------~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~l~sg 225 (379)
. ...|..-...++. .+++ +| .-.|.+.+|..+.+.. ..+ .||.+....+... +....+|+-+
T Consensus 149 ~--~~QIinY~~d~~~-kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~i-----egha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 149 A--GCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI-----EGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred c--cCeeEEeeeCCCC-CeEEEEeeccCCCcccceeeeeecccccc-hhh-----hHhHhhhheeccCCCCCCceEEEEE
Confidence 1 1223333334433 3433 22 2357788888765421 122 3443333222221 1112233222
Q ss_pred c---CCCcEEEEEccCC--c------cceEEEec---ccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCcee
Q 016974 226 S---CDSTARLWDTRVA--S------RAVRTFHG---HEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 285 (379)
Q Consensus 226 ~---~d~~i~vwd~~~~--~------~~~~~~~~---h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~ 285 (379)
. ..+.++|-++... + +.+..+-. -..-.-++..|+.-..+...+.-|.|.++|+.++..+
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 1 1257888877432 1 11111111 1222346777777777888888999999999998765
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.46 E-value=5.5 Score=40.37 Aligned_cols=39 Identities=31% Similarity=0.281 Sum_probs=33.7
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeec
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL 107 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 107 (379)
.+.+++..++..+++|-+.|+++|||++.+++++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 467777888888999999999999999999998877654
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.79 E-value=21 Score=30.33 Aligned_cols=96 Identities=13% Similarity=0.204 Sum_probs=46.9
Q ss_pred cCCCEEEEeeCC------CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecC-----cEEEEeCCC
Q 016974 260 PDGNRFGTGSDD------GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNG-----DCYVWDTLL 328 (379)
Q Consensus 260 p~g~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg-----~i~iwd~~~ 328 (379)
.++..++.|+.+ ..+.+||+.+.+-...- .... ....-..+. .++++++.|+.++ .+.+||..+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA--PMKT-PRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC--CCSS-CCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC--CCCC-CcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCC
Confidence 467777777642 35889998875422211 1111 011112222 3667777776443 577888766
Q ss_pred ceEEEecccccCCccCceeEEEECCCCCeEEEeeCC
Q 016974 329 AKVVLNLGSLQNSHEGRITCLGLSADGSALCTGSWD 364 (379)
Q Consensus 329 ~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D 364 (379)
.+-.. +........ .-..+. .++++++.|+.+
T Consensus 232 ~~W~~-~~~~p~~r~-~~~~~~--~~~~i~v~GG~~ 263 (318)
T 2woz_A 232 NKWEV-MTEFPQERS-SISLVS--LAGSLYAIGGFA 263 (318)
T ss_dssp CCEEE-CCCCSSCCB-SCEEEE--ETTEEEEECCBC
T ss_pred CeEEE-CCCCCCccc-ceEEEE--ECCEEEEECCee
Confidence 54322 211111111 112222 356777877765
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.69 E-value=22 Score=30.31 Aligned_cols=146 Identities=14% Similarity=0.214 Sum_probs=69.8
Q ss_pred CceEEEeeCC-------CeEEEeecCCCeeEEEecCcc-ccCCccCeEEEEEeCCCCcEEEEecCC------CcEEEEEc
Q 016974 171 DTHLITSSGD-------QTCVLWDITTGLRTSVFGGEF-QSGHTADVLSVSISGSNSRMFVSGSCD------STARLWDT 236 (379)
Q Consensus 171 ~~~l~s~~~d-------~~i~~wd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~sg~~d------~~i~vwd~ 236 (379)
+..++.|+.+ ..+.+||+.+..-...-.... ...| ++.. .++++++.|+.+ ..+.+||.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-----~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-----NVIS--HNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-----EEEE--ETTEEEEECCEESSSCBCCCEEEEET
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-----EEEE--ECCEEEEEcCCCCCCCccceEEEEcC
Confidence 4566666653 347778887764433211100 0122 1112 255677777642 35788887
Q ss_pred cCCccceEEEecccC--CeeEEEEccCCCEEEEeeCC-----CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCC
Q 016974 237 RVASRAVRTFHGHEG--DVNTVKFFPDGNRFGTGSDD-----GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISG 309 (379)
Q Consensus 237 ~~~~~~~~~~~~h~~--~v~~v~~sp~g~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g 309 (379)
.... -..+..-.. .-.+++. -++..++.|+.+ ..+.+||+.+.+-...- .... ....-..+ ..++
T Consensus 183 ~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~-~r~~~~~~--~~~~ 254 (318)
T 2woz_A 183 KKGD--WKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT--EFPQ-ERSSISLV--SLAG 254 (318)
T ss_dssp TTTE--EEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC--CCSS-CCBSCEEE--EETT
T ss_pred CCCE--EEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECC--CCCC-cccceEEE--EECC
Confidence 6431 111111111 1112222 266777777643 35778998775422111 1101 01111222 2356
Q ss_pred CEEEEEEec--------------CcEEEEeCCCceE
Q 016974 310 RLLFAGYSN--------------GDCYVWDTLLAKV 331 (379)
Q Consensus 310 ~~l~sg~~d--------------g~i~iwd~~~~~~ 331 (379)
++++.|+.+ ..+.+||..+.+-
T Consensus 255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 777776643 3578888766543
No 347
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=82.64 E-value=1.6 Score=25.00 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=26.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 3 SSVSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+.++++.++++.+++.+..++.++...++.+
T Consensus 9 dlvsel~~r~e~LE~Ri~~LE~KLd~L~~~l 39 (43)
T 2pnv_A 9 DMISDLNERSEDFEKRIVTLETKLETLIGSI 39 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999998887765
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=82.31 E-value=25 Score=30.71 Aligned_cols=113 Identities=10% Similarity=0.040 Sum_probs=61.1
Q ss_pred ceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEe--CCCCcEEEEe-cCCCcEEEEEccCCccceEEEec
Q 016974 172 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSIS--GSNSRMFVSG-SCDSTARLWDTRVASRAVRTFHG 248 (379)
Q Consensus 172 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~l~sg-~~d~~i~vwd~~~~~~~~~~~~~ 248 (379)
..++.++.||.|.-.|..+|...=.+... ...++....-. +.++..++.. ..||.|..++....... ..+.-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~ 85 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSI 85 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeecc
Confidence 36788899999999998888655444221 11112211100 0122344433 57888887776543211 11110
Q ss_pred ----ccCCeeE----EEEcc----CCCEEEEeeCCCeEEEEECCCCceeEEEe
Q 016974 249 ----HEGDVNT----VKFFP----DGNRFGTGSDDGTCRLFDIRTGHQLQVYY 289 (379)
Q Consensus 249 ----h~~~v~~----v~~sp----~g~~l~s~s~D~~i~iwd~~~~~~~~~~~ 289 (379)
...++.. +...+ .+..+.+|+.++.+...|+++|+.+..+.
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 0111110 00000 35578899999999999999998876653
No 349
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=80.57 E-value=3.7 Score=20.77 Aligned_cols=25 Identities=36% Similarity=0.387 Sum_probs=16.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQK 29 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (379)
|++|+|+...+...+.++++++...
T Consensus 1 isrlee~~r~l~~ivq~lq~r~drl 25 (32)
T 2akf_A 1 VSRLEEDVRNLNAIVQKLQERLDRL 25 (32)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777766666666666554
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.54 E-value=7.5 Score=39.40 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=31.6
Q ss_pred CeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 252 DVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 252 ~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
.+.+++..++..++++-+.|+++|+|++.+++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4667777788889999999999999999999877654
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=78.01 E-value=32 Score=29.36 Aligned_cols=178 Identities=6% Similarity=0.041 Sum_probs=88.5
Q ss_pred EeeCCCCeEEEEcCC--------------CcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEee--CCCcEEEEE
Q 016974 74 DWTSERNRIVSASQD--------------GRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGG--LDSVCSIFN 137 (379)
Q Consensus 74 ~~~~~~~~l~s~s~D--------------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~d~~i~iw~ 137 (379)
-+++++++|+-+... ..|+..++..++... +... ....|+++++.|+-.. .++.-.||.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD----PCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS----CEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC----CccEEEEeCCEEEEEeecCCCCceEEE
Confidence 457888888766432 467777776554322 2211 1236788999888776 344455555
Q ss_pred cCCCCCCCCCcceeeeecccccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCC
Q 016974 138 LNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGS 217 (379)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 217 (379)
++..... ...+..+.. ..+.+++..+..+......|..-++..+.+...+. + ... ..+.|.
T Consensus 134 ~~~dGs~------~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-----~---~~~-~~~~P~ 194 (302)
T 3s25_A 134 IRIDGEE------KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-----C---NCY-KPVVLD 194 (302)
T ss_dssp EETTSCC------CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-----S---CEE-EEEEEE
T ss_pred EECCCCC------eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-----C---Ccc-ceeeec
Confidence 4432111 112222221 23455655444454446778777876665444332 1 111 224454
Q ss_pred CCcEEEEecCCCcEEEEEccCCccceEEEecccCCeeEEEEccCCCEEEEeeC--CCeEEEEECC
Q 016974 218 NSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNTVKFFPDGNRFGTGSD--DGTCRLFDIR 280 (379)
Q Consensus 218 ~~~~l~sg~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l~s~s~--D~~i~iwd~~ 280 (379)
++.++.+...++ -+|+-+.........+. ...+ ..|+|++.+|.-++. ...|..-++.
T Consensus 195 g~~iy~t~~~~~-~~I~~~~ldG~~~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 195 DTNVYYMDVNRD-NAIVHVNINNPNPVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp TTEEEEEEGGGT-TEEEEECSSSCCCEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred CCEEEEEEcCCC-cEEEEEECCCCCeEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 555554443332 33443332222233332 2233 347888888875532 3455555554
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=65.35 E-value=8.3 Score=36.23 Aligned_cols=70 Identities=13% Similarity=0.072 Sum_probs=45.8
Q ss_pred EEEEeCCCCcEEEEecCCCcEEEEEccCCcc-----------c-eEEEecccCCeeEEEEccCCCEEEEeeCCCeEEEEE
Q 016974 211 SVSISGSNSRMFVSGSCDSTARLWDTRVASR-----------A-VRTFHGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFD 278 (379)
Q Consensus 211 ~~~~~~~~~~~l~sg~~d~~i~vwd~~~~~~-----------~-~~~~~~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd 278 (379)
.+.++|....++++|-.+.++.++|+..... . ..... -.-.....+|.++|.-..|-.-|..|--|+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 3555664444556677789999999873211 1 11111 112356789999996667777899999999
Q ss_pred CCC
Q 016974 279 IRT 281 (379)
Q Consensus 279 ~~~ 281 (379)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 864
No 353
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=64.32 E-value=28 Score=32.96 Aligned_cols=59 Identities=24% Similarity=0.197 Sum_probs=38.3
Q ss_pred eeEEEEccCCCEEEEeeCC------------CeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEE
Q 016974 253 VNTVKFFPDGNRFGTGSDD------------GTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAG 315 (379)
Q Consensus 253 v~~v~~sp~g~~l~s~s~D------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg 315 (379)
.--|+|+|.|.+++.--.+ ..+.+.+..+++....+..+ ...+++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P----~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP----IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC----TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC----CCccCcCeeECCCCCEEEEE
Confidence 4678999999866543221 23455566666554333322 23569999999999988776
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.29 E-value=5.8 Score=41.17 Aligned_cols=38 Identities=32% Similarity=0.288 Sum_probs=31.6
Q ss_pred EEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeec
Q 016974 70 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL 107 (379)
Q Consensus 70 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 107 (379)
+.+++..++..+|++-+.|+++|||++.+++++.+...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 44556667888999999999999999999998877654
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=64.20 E-value=86 Score=28.58 Aligned_cols=29 Identities=10% Similarity=0.011 Sum_probs=21.3
Q ss_pred ceEEEEECCCCC-EEEEeeCCCcEEEEEcC
Q 016974 111 WVMTCAFSPTGQ-SVACGGLDSVCSIFNLN 139 (379)
Q Consensus 111 ~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~ 139 (379)
....++|.|+|. .|+.+...+.|++++.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 457889999996 45555678888888643
No 356
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=63.52 E-value=13 Score=22.07 Aligned_cols=31 Identities=29% Similarity=0.539 Sum_probs=20.2
Q ss_pred chhHHHHHHHHHH----HHHHHHHHHHHHHHHhhc
Q 016974 4 SVSELKERHAAAI----ETVNSLRERLKQKRQQLL 34 (379)
Q Consensus 4 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 34 (379)
+++||.++.+.+. +.+++++.+-.++|+-.+
T Consensus 11 s~eEL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIl 45 (51)
T 2jo8_A 11 TVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPIL 45 (51)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccHHHHHHHHHHHHHHHHhHhhHH
Confidence 5678888776664 445566666677766543
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.61 E-value=14 Score=35.72 Aligned_cols=37 Identities=8% Similarity=0.214 Sum_probs=30.2
Q ss_pred cEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeec
Q 016974 69 KVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL 107 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 107 (379)
.|.++.+ +..+|++-+.|+++|+|++.+++++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666544 467999999999999999999988877665
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=58.51 E-value=95 Score=27.20 Aligned_cols=47 Identities=6% Similarity=-0.026 Sum_probs=25.0
Q ss_pred CeEEEEcCCCcEEEEECCC-CceeeEe--ecCCcceEEEEECC--CCCEEEEe
Q 016974 80 NRIVSASQDGRLIVWNALT-SQKTHAI--KLPCAWVMTCAFSP--TGQSVACG 127 (379)
Q Consensus 80 ~~l~s~s~D~~v~iwd~~~-~~~~~~~--~~~~~~v~~~~~s~--~g~~l~~~ 127 (379)
..|..|...| +.+.+... +..-..+ ......+.++++.| .+...+.+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~ 74 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA 74 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe
Confidence 3566666666 44444332 2222222 23445689999998 44444443
No 359
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=58.11 E-value=14 Score=17.61 Aligned_cols=21 Identities=29% Similarity=0.536 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 016974 13 AAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+++...++.+++++...|+.+
T Consensus 4 delykeledlqerlrklrkkl 24 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKKL 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 345556677777776666554
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=57.36 E-value=1e+02 Score=27.25 Aligned_cols=173 Identities=8% Similarity=0.112 Sum_probs=87.6
Q ss_pred eEEEeecCCC--eeEEEecC--ccccCCccCeEEEEEe-C--C----CCcEEEEecCCCcEEEEEccCCccceEEE----
Q 016974 182 TCVLWDITTG--LRTSVFGG--EFQSGHTADVLSVSIS-G--S----NSRMFVSGSCDSTARLWDTRVASRAVRTF---- 246 (379)
Q Consensus 182 ~i~~wd~~~~--~~~~~~~~--~~~~~h~~~v~~~~~~-~--~----~~~~l~sg~~d~~i~vwd~~~~~~~~~~~---- 246 (379)
+|.+||+.++ ..+..+.. .... ....+..+.+. . . ++..+++-+....|-++|+... +.-+.+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~-~swRv~~~~~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQ-DSWNVTHPTF 201 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTT-EEEEEECGGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCC-cEEEEccCCC
Confidence 3455666665 44433321 1111 22346666666 1 1 2334556666788999998754 222222
Q ss_pred ----------ecc----cCCeeEEEEccC----CCEEEEeeCCCeEEEEECC-----CC---ceeEEEeeccCCCCCCCe
Q 016974 247 ----------HGH----EGDVNTVKFFPD----GNRFGTGSDDGTCRLFDIR-----TG---HQLQVYYQQHGENEIPHV 300 (379)
Q Consensus 247 ----------~~h----~~~v~~v~~sp~----g~~l~s~s~D~~i~iwd~~-----~~---~~~~~~~~~~~~~~~~~v 300 (379)
.|. ...|..++++|+ ++.|.-....+. ++|.+. .. ..++.+ ...+ ....-
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~-G~kg--~~s~~ 277 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELL-GNRG--KYNDA 277 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEE-EECC--TTCCE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEe-eecC--CCCCc
Confidence 111 135788888887 666654443332 344332 11 112211 1111 11234
Q ss_pred EEEEEc-cCCCEEEEEEecCcEEEEeCCC-c---eEEEecccccCCccCceeEEEECCCCCeEEEee
Q 016974 301 TSIAFS-ISGRLLFAGYSNGDCYVWDTLL-A---KVVLNLGSLQNSHEGRITCLGLSADGSALCTGS 362 (379)
Q Consensus 301 ~~~~fs-~~g~~l~sg~~dg~i~iwd~~~-~---~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s 362 (379)
...+++ .+|.++++--....|..|+... . .....+.. ...-..+..+++.++|...+.++
T Consensus 278 ~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~--d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 278 IALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT--SSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE--CTTCCSEEEEEECTTSCEEEEEC
T ss_pred ceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEE--CCCccccCeEEECCCCeEEEEEC
Confidence 456776 6777777777888999999765 1 11111110 11223467788877887666553
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.34 E-value=59 Score=30.66 Aligned_cols=61 Identities=23% Similarity=0.200 Sum_probs=39.8
Q ss_pred CeeEEEEccCCCEEEEe-eC-----------CCeEEEEECCCCceeEEEeeccCCCCCCCeEEEEEccCCCEEEEEE
Q 016974 252 DVNTVKFFPDGNRFGTG-SD-----------DGTCRLFDIRTGHQLQVYYQQHGENEIPHVTSIAFSISGRLLFAGY 316 (379)
Q Consensus 252 ~v~~v~~sp~g~~l~s~-s~-----------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~ 316 (379)
....|.|.++|.+.++- .. ...+..++..+++....+... ....++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P----~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP----IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC----TTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC----CCccccCCEECCCCCEEEEEE
Confidence 46789999999877632 11 125666677666654333211 123589999999999888764
No 362
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=57.32 E-value=32 Score=22.00 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=26.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 1 MSSSVSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
|.|-|+.|++++.+++++...|+.+-.-.|...
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 357789999999999999999887777766554
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.25 E-value=9.8 Score=39.45 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=30.8
Q ss_pred CeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEE
Q 016974 252 DVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY 288 (379)
Q Consensus 252 ~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~ 288 (379)
.+.+++..++..++++-+.|+++|+||+.++..+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4455666778889999999999999999999877654
No 364
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=56.34 E-value=21 Score=23.58 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=16.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHH
Q 016974 3 SSVSELKERHAAAIETVNSLRERLKQ 28 (379)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (379)
|.+++|++++..+.+.+.-++-++..
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieE 31 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEE 31 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777777777777755555444433
No 365
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=56.28 E-value=19 Score=18.44 Aligned_cols=29 Identities=21% Similarity=0.415 Sum_probs=21.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 3 SSVSELKERHAAAIETVNSLRERLKQKRQ 31 (379)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (379)
|+++-++|+.++.++.+.+..+++.+..-
T Consensus 2 ekiaaikeeqaaieeeiqaikeeiaaiky 30 (36)
T 1bb1_B 2 EKIAAIKEEQAAIEEEIQAIKEEIAAIKY 30 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888888888888777766543
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.55 E-value=36 Score=32.27 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=37.9
Q ss_pred eEEEEEccCCCEEEEEEec------------CcEEEEeCCCceEEEecccccCCccCceeEEEECCCCCeEEEe
Q 016974 300 VTSIAFSISGRLLFAGYSN------------GDCYVWDTLLAKVVLNLGSLQNSHEGRITCLGLSADGSALCTG 361 (379)
Q Consensus 300 v~~~~fs~~g~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~ 361 (379)
.--|+|+|.|.++++-+.+ ..+.+.+..+++...-+. ..-...++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~---~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV---GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE---CCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe---CCCCccCcCeeECCCCCEEEEE
Confidence 4568999999976654332 134445555555443331 1234579999999999988764
No 367
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=55.49 E-value=31 Score=20.67 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQLL 34 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (379)
++.|+.+.+.+..+++.|.++++..+.++.
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567778888888888888888887776653
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=53.29 E-value=22 Score=34.46 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=28.6
Q ss_pred CeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEe
Q 016974 252 DVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYY 289 (379)
Q Consensus 252 ~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~ 289 (379)
.|.++.+ +..++++-+.|.++|+||+++++.+....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555554 46799999999999999999998776543
No 369
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=51.98 E-value=27 Score=18.93 Aligned_cols=24 Identities=29% Similarity=0.261 Sum_probs=15.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Q 016974 4 SVSELKERHAAAIETVNSLRERLK 27 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~ 27 (379)
.+++.++++..+..+++.|+++-.
T Consensus 9 TLeEtkeQi~~l~~kl~~LkeEKH 32 (38)
T 2l5g_A 9 SLEETKEQILKLEEKLLALQEEKH 32 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677777777777776665543
No 370
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.98 E-value=1.9e+02 Score=27.93 Aligned_cols=277 Identities=11% Similarity=0.069 Sum_probs=134.7
Q ss_pred ccEEEEEeeCCCCeEEEEcCCCcEEEEECCCCceeeEeecCCcceEEEEECCCCCEEEEeeCCCcEEEEEcCCCCCCCCC
Q 016974 68 GKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGN 147 (379)
Q Consensus 68 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~ 147 (379)
..|.++.-..++ .|..|+.+| +..+|..+.+...........|.++.. .+|. |-.+..+ -+..++.....
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~----- 132 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRK----- 132 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCC-----
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCe-----
Confidence 458888777666 455555555 788998765432211111234555543 3454 4444445 46667754311
Q ss_pred cceeeee-cc-cccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccCCccCeEEEEEeCCCCcEEEEe
Q 016974 148 LPVSRML-SG-HKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSG 225 (379)
Q Consensus 148 ~~~~~~~-~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 225 (379)
....... .+ ....|.++....++ .|-.|+.. -+..+|..++.................|.++.....++.+.+ |
T Consensus 133 ~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-g 208 (758)
T 3ott_A 133 LTSFDTRRNGLPNNTIYSIIRTKDN--QIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-G 208 (758)
T ss_dssp EEEECHHHHCCSCSCEEEEEECTTC--CEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEE-E
T ss_pred EEEeccCCCCcCCCeEEEEEEcCCC--CEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEE-E
Confidence 1000000 00 12346666554433 34445544 477788766543221100000001234677766643333333 4
Q ss_pred cCCCcEEEEEccCCccceEEEe-cccCCeeEEEEccCCCEEEEeeCCCeEEEEECCCCceeEEEeeccC---CCCCCCeE
Q 016974 226 SCDSTARLWDTRVASRAVRTFH-GHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG---ENEIPHVT 301 (379)
Q Consensus 226 ~~d~~i~vwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~---~~~~~~v~ 301 (379)
+. +.+..+|.... . ...+. -....|.++...++|.+.+ |+.+ -+.+++..++.. ..+..... .-....|.
T Consensus 209 t~-~Gl~~~~~~~~-~-~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~ 282 (758)
T 3ott_A 209 TE-GYLFQYFPSTG-Q-IKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIW 282 (758)
T ss_dssp EE-EEEEEEETTTT-E-EEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCC-EEECCCTTCTTSCSCSCEE
T ss_pred EC-CCCeEEcCCCC-e-EEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcE-EEEEcCCCCcCcCCcCeEE
Confidence 43 45777886532 1 11111 1234588888888887655 4444 578888766542 22221111 01123588
Q ss_pred EEEEccCCCEEEEEEecCcEEEEeCCCceEEEecccc-cCCccCceeEEEECCCCCeEEEeeCCCcE
Q 016974 302 SIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSL-QNSHEGRITCLGLSADGSALCTGSWDTNL 367 (379)
Q Consensus 302 ~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~~~s~d~~~l~s~s~D~~i 367 (379)
++..+.+|.+- .|+..| +.++.............. .......|.++.-..+|.+.+. +.+|..
T Consensus 283 ~i~~D~~g~lW-iGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~Gl~ 346 (758)
T 3ott_A 283 NIFADQEHNIW-LGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANGLI 346 (758)
T ss_dssp EEEECTTCCEE-EEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTEEE
T ss_pred EEEEcCCCCEE-EEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCcce
Confidence 99888888644 455556 555542211111111000 0112346888888888887664 455533
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.29 E-value=1.1e+02 Score=28.79 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=40.9
Q ss_pred cEEEEEeeCCCCeEE-EEcC-----------CCcEEEEECCCCceeeEeecC-CcceEEEEECCCCCEEEEee
Q 016974 69 KVYSLDWTSERNRIV-SASQ-----------DGRLIVWNALTSQKTHAIKLP-CAWVMTCAFSPTGQSVACGG 128 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~-s~s~-----------D~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~ 128 (379)
....|.|.++|.+.+ |=.. ...|...+..+++....+..+ ...+..++|+||++.|..+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 356789999998777 3211 114666676677765555544 35689999999999887653
No 372
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=42.96 E-value=39 Score=18.13 Aligned_cols=29 Identities=14% Similarity=0.289 Sum_probs=17.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
-+.||+.+.+++......|+.+..+.+..
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~l 30 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKKK 30 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35566666666666666666666555544
No 373
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=41.40 E-value=40 Score=17.83 Aligned_cols=30 Identities=7% Similarity=0.199 Sum_probs=19.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
-+.||+.+...+...-++|+.+..+.|..+
T Consensus 2 RMnQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 2 RMXQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 356777777777666666766666665543
No 374
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=40.89 E-value=48 Score=18.57 Aligned_cols=26 Identities=31% Similarity=0.359 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKR 30 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (379)
|++|+++....+....+|++++.-.+
T Consensus 5 l~eLE~r~k~le~~naeLEervstLq 30 (42)
T 2oqq_A 5 LSELENRVKDLENKNSELEERLSTLQ 30 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777777777777776665543
No 375
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=38.30 E-value=20 Score=19.68 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=21.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 2 SSSVSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
++++..++.+...+..+++.+++++....+.+
T Consensus 3 ~~~i~avKkKiq~lq~q~d~aee~~~~~~~~l 34 (37)
T 3azd_A 3 SSSLEAVRRKIRSLQEQNYHLENEVARLKKLV 34 (37)
T ss_dssp ---CHHHHHHHHHHHHHTTTTHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677777777777777777777777665543
No 376
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=38.07 E-value=60 Score=21.23 Aligned_cols=29 Identities=24% Similarity=0.310 Sum_probs=19.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
-|.+|+.+++.....+++|.+.+.+.+++
T Consensus 15 Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~ 43 (78)
T 3efg_A 15 RLVELETRLSFQEQALTELSEALADARLT 43 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777777666555444
No 377
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=36.33 E-value=45 Score=17.03 Aligned_cols=23 Identities=35% Similarity=0.489 Sum_probs=9.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLK 27 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~ 27 (379)
++-++|+.--++-++.++.++..
T Consensus 10 vsalkeqflmlmfkvsalkekvs 32 (36)
T 3tq2_A 10 VSALKEQFLMLMFKVSALKEKVS 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444443
No 378
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=35.81 E-value=50 Score=17.40 Aligned_cols=30 Identities=3% Similarity=0.121 Sum_probs=19.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
-+.||+.+.+.+...-.+|+.+....+..+
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 356677777777666666766666665543
No 379
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=35.63 E-value=40 Score=21.32 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=6.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHH
Q 016974 2 SSSVSELKERHAAAIETVNSLR 23 (379)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~ 23 (379)
++.++++.+.+..-.+.+.+|+
T Consensus 10 ~~~~e~~~~~i~~Kde~I~eLE 31 (67)
T 1zxa_A 10 SELEEDFAKILMLKEERIKELE 31 (67)
T ss_dssp -------CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccHHHHHHHH
Confidence 3444444444444444444443
No 380
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=35.60 E-value=2.1e+02 Score=24.52 Aligned_cols=113 Identities=12% Similarity=0.082 Sum_probs=68.4
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceeE--EEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCC--CceEEE---
Q 016974 261 DGNRFGTGSDDGTCRLFDIRTGHQLQ--VYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTL--LAKVVL--- 333 (379)
Q Consensus 261 ~g~~l~s~s~D~~i~iwd~~~~~~~~--~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~--~~~~~~--- 333 (379)
+..+++..+.+|.++--.+..-.... ... ...-.....+..+........|+..+..|.++.+... .-....
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~-~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIV-AVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEE-SCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceE-EEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 57789999999999988765421100 000 0001112345555555566788889999998888765 211100
Q ss_pred ---ecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCcee
Q 016974 334 ---NLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGGYR 376 (379)
Q Consensus 334 ---~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~~~ 376 (379)
..-.+ .....|.++...+++..|+..+..|.++.-.+..|.
T Consensus 187 ~Gv~~i~L--~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 187 SGVQGMRF--NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp BCEESSCC--CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred CCeeeecC--CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcc
Confidence 00011 123456666666667788999999999988877654
No 381
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=35.43 E-value=1.9e+02 Score=24.01 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=66.6
Q ss_pred CCCEEEEeeCCCeEEEEECCCCc----eeEEEeeccCCCCCCCeEEEEEccCCCEEEEEEecCcEEEEeCCCceE-----
Q 016974 261 DGNRFGTGSDDGTCRLFDIRTGH----QLQVYYQQHGENEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKV----- 331 (379)
Q Consensus 261 ~g~~l~s~s~D~~i~iwd~~~~~----~~~~~~~~~~~~~~~~v~~~~fs~~g~~l~sg~~dg~i~iwd~~~~~~----- 331 (379)
+..+++..+.+|.++-..+..-. ....+ .-.+...+..+....+...|+..+.+|.++.++...-..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i----~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a 154 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPII----KLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGA 154 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECS----CCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEE----ecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCC
Confidence 45789999999999998865421 00000 011223455655555667888899999988887422111
Q ss_pred --EEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEEEecCcee
Q 016974 332 --VLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKIWAFGGYR 376 (379)
Q Consensus 332 --~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~vw~~~~~~ 376 (379)
+.-+ .+.. ...|..+...+++..|+..+..|.++...+..|.
T Consensus 155 ~Gv~~i-~L~~--~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~ 198 (276)
T 3no0_A 155 RGVQGI-KLEK--NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIP 198 (276)
T ss_dssp CCEECC-CCCT--TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSC
T ss_pred CCEEEE-ccCC--CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcc
Confidence 1111 1111 2455555544566788889999999998887653
No 382
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=34.87 E-value=86 Score=20.87 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQLL 34 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (379)
.++++++++.+.++..++.+++...+.++.
T Consensus 3 ~~~L~~~i~~L~~q~~~L~~ei~~~~a~L~ 32 (85)
T 3viq_B 3 KSQLESRVHLLEQQKEQLESSLQDALAKLK 32 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456677777777777777777777666554
No 383
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=34.78 E-value=53 Score=17.31 Aligned_cols=29 Identities=7% Similarity=0.211 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+.||+++.+.+...-..|+.++...+..+
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34666666666666666666666655543
No 384
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=34.28 E-value=74 Score=21.85 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQLLD 35 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (379)
|++.+.......+.++.+++.+...|+++.+
T Consensus 66 LAeAka~~~Ka~~~~~el~~~I~~LrqEl~~ 96 (98)
T 4fm3_A 66 LAESKVLTQKSKDQLGELDKSLKRLRKQLGE 96 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3445555666677788888888888887643
No 385
>2rh2_A Dihydrofolate reductase type 2; folate metabolism, plasmid-encoded R67 DHFR, TMP-resistant DHFR, antibiotic resistance, methotrexate resistance; 0.96A {Escherichia coli} SCOP: b.34.4.1 PDB: 1vif_A* 1vie_A 2gqv_A 2rk1_A* 2rk2_A* 3sfm_A 2p4t_A*
Probab=33.72 E-value=17 Score=21.18 Aligned_cols=33 Identities=18% Similarity=0.417 Sum_probs=26.5
Q ss_pred eEEEECCCCCeEEEeeCCCcEEEEecCceeecC
Q 016974 347 TCLGLSADGSALCTGSWDTNLKIWAFGGYRRVL 379 (379)
Q Consensus 347 ~~~~~s~d~~~l~s~s~D~~i~vw~~~~~~~~~ 379 (379)
+|-...|.|..+-+-+.-|.|.||.+..+.|++
T Consensus 30 yct~ltpegyaveseshpgsvqiyp~~alervn 62 (62)
T 2rh2_A 30 YCTNLTPEGYAVESEAHPGSVQIYPVAALERIN 62 (62)
T ss_dssp ECCSSCSSEEEEEESSSTTCEEEEEGGGEEECC
T ss_pred EEccccccceEEecccCCCcEEEEEhhhhhccC
Confidence 344456888888888889999999999988875
No 386
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=32.74 E-value=51 Score=16.51 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQK 29 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (379)
++-|+++++++...+.++.=++.+.
T Consensus 4 iaalkqeiaalkkeiaalkfeiaal 28 (33)
T 4dzn_A 4 IAALKQEIAALKKEIAALKFEIAAL 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666665555444
No 387
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=32.31 E-value=60 Score=17.20 Aligned_cols=29 Identities=7% Similarity=0.323 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+.||+.+.+.+...-..++.++.+.+..+
T Consensus 3 M~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 3 MKQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45677777777766677777776666554
No 388
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=31.82 E-value=3.8e+02 Score=26.27 Aligned_cols=162 Identities=12% Similarity=0.118 Sum_probs=76.6
Q ss_pred ccceEEEEEecCCCceEEEeeCCCeEEEeecCCCeeEEEecCccccC--CccCeEEEEEeCCCCcEEEEecCCCc----E
Q 016974 158 KGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSG--HTADVLSVSISGSNSRMFVSGSCDST----A 231 (379)
Q Consensus 158 ~~~v~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~sg~~d~~----i 231 (379)
.+.|.++.++|.++..++.++..+.|...+= .+..-..+....... ....+.++++.+.+...+..+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 3578999999987677777777776654432 222222221100000 12468889888755444443332211 3
Q ss_pred EEEEccCCccceEEEec---------ccCCeeEEEEccC-CCEEEEeeCCCeEEEEECCC-CceeEEEeecc--CCCCCC
Q 016974 232 RLWDTRVASRAVRTFHG---------HEGDVNTVKFFPD-GNRFGTGSDDGTCRLFDIRT-GHQLQVYYQQH--GENEIP 298 (379)
Q Consensus 232 ~vwd~~~~~~~~~~~~~---------h~~~v~~v~~sp~-g~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~--~~~~~~ 298 (379)
.||-.....+.-..... ....+..++++|. .+.+..+...+.| |-... |+.-....... ..+ ..
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~-~~ 169 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTN-GI 169 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCST-TT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCC-CC
Confidence 44443333222222111 0013567888874 4455555533333 32222 22111111100 011 13
Q ss_pred CeEEEEEccC-CCEEEEEEec-CcEEE
Q 016974 299 HVTSIAFSIS-GRLLFAGYSN-GDCYV 323 (379)
Q Consensus 299 ~v~~~~fs~~-g~~l~sg~~d-g~i~i 323 (379)
.+..+.|+|. +..|+++..+ +.|+.
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred CeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 5788999884 4466666654 44443
No 389
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=31.51 E-value=53 Score=20.17 Aligned_cols=26 Identities=23% Similarity=0.270 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 7 ELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
.+..+-..+...+..|++++...++.
T Consensus 33 ~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 33 DLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444433
No 390
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=31.05 E-value=37 Score=19.53 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=15.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHH
Q 016974 2 SSSVSELKERHAAAIETVNSLRERL 26 (379)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (379)
|-.|++.+|+.+.+..++..|+.+.
T Consensus 5 QrELeEa~Erae~ae~~vnkLR~k~ 29 (45)
T 3zwh_Q 5 QRELEDATETADAMNREVSSLKNKL 29 (45)
T ss_dssp SSHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456666666666666666655443
No 391
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=30.03 E-value=52 Score=15.82 Aligned_cols=24 Identities=17% Similarity=0.340 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQ 28 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~ 28 (379)
+.+|+++-+.+.+.+.+++-++.+
T Consensus 2 irrlkqknarlkqeiaaleyeiaa 25 (28)
T 3ra3_B 2 IRRLKQKNARLKQEIAALEYEIAA 25 (28)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHH
Confidence 445555555555555555544433
No 392
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=29.67 E-value=79 Score=17.75 Aligned_cols=25 Identities=8% Similarity=0.236 Sum_probs=14.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQK 29 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (379)
|.+..++++...+++..++.+++..
T Consensus 11 I~kVdrEI~Kte~kI~~lqkKlkeL 35 (42)
T 2l5g_B 11 MDRVDREITMVEQQISKLKKKQQQL 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555556666666666666555544
No 393
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=29.45 E-value=69 Score=18.32 Aligned_cols=9 Identities=11% Similarity=0.431 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 016974 21 SLRERLKQK 29 (379)
Q Consensus 21 ~~~~~~~~~ 29 (379)
+++++++..
T Consensus 19 E~RkElqK~ 27 (45)
T 1use_A 19 EVKKELQKV 27 (45)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333344333
No 394
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=28.84 E-value=69 Score=16.81 Aligned_cols=29 Identities=3% Similarity=0.197 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+.||+.+.+++......+..++...+..+
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 35666666666666666666666665543
No 395
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=28.59 E-value=65 Score=19.19 Aligned_cols=27 Identities=7% Similarity=0.075 Sum_probs=14.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKR 30 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (379)
+|.+|..+.+.+-.++..|...+...|
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~ 31 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAAR 31 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555555554444
No 396
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=27.85 E-value=1e+02 Score=20.83 Aligned_cols=27 Identities=7% Similarity=0.292 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 6 SELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
++|.++++.+.++++.+.+.+.+.+..
T Consensus 52 aKL~Rk~DKl~~ele~l~~~l~~~k~~ 78 (93)
T 3sjb_C 52 TKNNRKLDSLDKEINNLKDEIQSENKA 78 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888888888877777654
No 397
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.80 E-value=3e+02 Score=23.85 Aligned_cols=99 Identities=10% Similarity=0.048 Sum_probs=44.8
Q ss_pred CeeEEEEccC-CCEEEEeeCCCeEEEEECCCCceeEEEeeccCCCC--------CCCeEEEEEccC-CCEEEEEEecCcE
Q 016974 252 DVNTVKFFPD-GNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGENE--------IPHVTSIAFSIS-GRLLFAGYSNGDC 321 (379)
Q Consensus 252 ~v~~v~~sp~-g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~--------~~~v~~~~fs~~-g~~l~sg~~dg~i 321 (379)
.+.+|.++|. ...|..+..++.|...+ ..++.-........... ...+.++.++|. ...|.++... .|
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~-gl 255 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC-GI 255 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-EE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-eE
Confidence 5788999883 34454454444444332 12222221111000000 124789999986 3566666544 35
Q ss_pred EEEeCCCceEEEeccc-ccCCccCceeEEEECC
Q 016974 322 YVWDTLLAKVVLNLGS-LQNSHEGRITCLGLSA 353 (379)
Q Consensus 322 ~iwd~~~~~~~~~~~~-~~~~h~~~v~~~~~s~ 353 (379)
+..+- .++....+.. +...-...+.+++++|
T Consensus 256 ~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p 287 (394)
T 3b7f_A 256 YRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQ 287 (394)
T ss_dssp EEEET-TTTEEECGGGGSCTTTCSCEEEEEECS
T ss_pred EEeCC-CCCcceECCCCCCCCCccceEEEEECC
Confidence 55442 2222222211 1010013456788876
No 398
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=27.68 E-value=1.1e+02 Score=20.56 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=21.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQLLD 35 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (379)
-+++|+++-+.+...++.|.+++...+..+.+
T Consensus 44 r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~ 75 (87)
T 1hjb_A 44 KVLELTAENERLQKKVEQLSRELSTLRNLFKQ 75 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666677777777777777766543
No 399
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=27.35 E-value=68 Score=22.53 Aligned_cols=27 Identities=11% Similarity=0.267 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQ 31 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (379)
+.+|+++...+.++++.+++++++.++
T Consensus 9 ~~~l~~~~~~l~~~i~~lkeel~~L~~ 35 (109)
T 2wg5_A 9 MKQLEDKVEELLSKNYHLENEVARLRS 35 (109)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 457777888888888888777777754
No 400
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=27.10 E-value=1.6e+02 Score=20.49 Aligned_cols=10 Identities=20% Similarity=0.202 Sum_probs=5.1
Q ss_pred EecCcEEEEe
Q 016974 316 YSNGDCYVWD 325 (379)
Q Consensus 316 ~~dg~i~iwd 325 (379)
..||.+.++|
T Consensus 64 ~~dGNLVl~d 73 (113)
T 3mez_B 64 GHSGELDITD 73 (113)
T ss_dssp CTTSCEEEEC
T ss_pred eCCCcEEEEC
Confidence 3455555554
No 401
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=25.95 E-value=1.2e+02 Score=19.81 Aligned_cols=30 Identities=27% Similarity=0.141 Sum_probs=17.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQLL 34 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (379)
|++|.+....-...++.+.+++....+++.
T Consensus 30 IeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~ 59 (78)
T 3efg_A 30 LTELSEALADARLTGARNAELIRHLLEDLG 59 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555556666666666666666554
No 402
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=25.93 E-value=53 Score=20.50 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=7.8
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSL 22 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (379)
+++|+++++.+++.+..|
T Consensus 46 ~~~L~~ri~~Le~~l~~l 63 (70)
T 1zme_C 46 LQQLQKDLNDKTEENNRL 63 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444433
No 403
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=25.79 E-value=88 Score=17.06 Aligned_cols=17 Identities=24% Similarity=0.284 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 016974 12 HAAAIETVNSLRERLKQ 28 (379)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ 28 (379)
.++++..+.++++++.+
T Consensus 22 laaleselqalekklaa 38 (48)
T 1g6u_A 22 LAALESELQALEKKLAA 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33334444444444433
No 404
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=25.26 E-value=82 Score=16.52 Aligned_cols=28 Identities=4% Similarity=0.104 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
+.||+.+.+.+...-.+|+.+....+..
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~l 29 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3455566665555555555555555444
No 405
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.07 E-value=4.7e+02 Score=25.25 Aligned_cols=241 Identities=12% Similarity=0.093 Sum_probs=108.4
Q ss_pred ECCCCCEEEEe-----eCCCcEEEEEcCCCCCCCCCcceeeeecc-c--ccceEEEEEecCCCceEEEe----------e
Q 016974 117 FSPTGQSVACG-----GLDSVCSIFNLNSPTDKDGNLPVSRMLSG-H--KGYVSCCQYVPDEDTHLITS----------S 178 (379)
Q Consensus 117 ~s~~g~~l~~~-----~~d~~i~iw~~~~~~~~~~~~~~~~~~~~-h--~~~v~~~~~~~~~~~~l~s~----------~ 178 (379)
++|++++++.+ +.-..++++|+.++.--.+.+. .. .++ . ......++|.. ++.++++. +
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~-~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~~~~~~ 213 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PI-TNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNEITSSL 213 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CB-CTTCCBCCEETCCEEEEE-TTEEEECCCCSTTCBCTTS
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cc-cccccccccccceeeEEC-CCEEEEEeCCCCCCcCcCC
Confidence 89999876652 3335689999976432111111 00 000 0 00112236663 33444432 2
Q ss_pred CCCeEEEeecCCCe--eEEEecCccccCCccCeEEEEEeCCCCc----EEEEecCC---CcEEEEEccCCccceEEEecc
Q 016974 179 GDQTCVLWDITTGL--RTSVFGGEFQSGHTADVLSVSISGSNSR----MFVSGSCD---STARLWDTRVASRAVRTFHGH 249 (379)
Q Consensus 179 ~d~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~----~l~sg~~d---~~i~vwd~~~~~~~~~~~~~h 249 (379)
...+|+.|.+.+.. ...+++.. ...-..+......... .+++.+.+ ..+.+.|..........+.-.
T Consensus 214 ~~~~v~~~~~Gt~~~~~~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 214 YPNSLYIWKRGESIEKAKKLFEVP----KEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp SBCEEEEEETTSCGGGCEEEEECC----TTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CCCEEEEEECCCChHHCeEEeccC----CCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 34678899887653 22233221 1111222333332221 35543322 334555543221222222111
Q ss_pred cCCeeEEEEccCCCEEEEee----------CCCeEEEEECCCCc-------eeEEEeeccCCCCCCCeEEEEEccCCCEE
Q 016974 250 EGDVNTVKFFPDGNRFGTGS----------DDGTCRLFDIRTGH-------QLQVYYQQHGENEIPHVTSIAFSISGRLL 312 (379)
Q Consensus 250 ~~~v~~v~~sp~g~~l~s~s----------~D~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~v~~~~fs~~g~~l 312 (379)
.. ..+..++++..++... ..+.|...|+.++. ....+..+. ....+..+.+..+ .++
T Consensus 290 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 290 SD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT---ANEVFNFISTTKD-RVF 363 (711)
T ss_dssp TT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC---TTEEEEEEEECSS-CEE
T ss_pred Cc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC---CCCeEEEEEEECC-EEE
Confidence 11 1223445665555321 35567788876531 122222211 1224677888765 577
Q ss_pred EEEEecC--cEEEEeCCCceE-EEe-cccccCCccCceeEEEECCCCC-eEEEeeCC---CcEEEEecC
Q 016974 313 FAGYSNG--DCYVWDTLLAKV-VLN-LGSLQNSHEGRITCLGLSADGS-ALCTGSWD---TNLKIWAFG 373 (379)
Q Consensus 313 ~sg~~dg--~i~iwd~~~~~~-~~~-~~~~~~~h~~~v~~~~~s~d~~-~l~s~s~D---~~i~vw~~~ 373 (379)
++...++ .|+++|..+++. ... +. + . ..+.|....+++++. ++++.+.. ..+..+++.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~-l-p-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLK-L-P-YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEEC-C-C-STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccC-C-C-CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 7777777 467777655431 111 11 1 1 123466666667664 44443332 345555543
No 406
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=25.06 E-value=87 Score=22.11 Aligned_cols=27 Identities=15% Similarity=0.225 Sum_probs=12.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQ 31 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (379)
|++|+.++..+.++|....+++++.|+
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erlr~ 99 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERLRR 99 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444444444444444444443
No 407
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=24.87 E-value=57 Score=20.28 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
+++|+++-..+...++.|+.++...++.
T Consensus 32 ~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 32 CKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555555555544443
No 408
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.86 E-value=3.6e+02 Score=23.75 Aligned_cols=196 Identities=12% Similarity=0.145 Sum_probs=95.9
Q ss_pred cEEEEEeeCCCCeEE--EEcC-------------CCcEEEEECCCC--ceeeEeecCC------cceEEEEEC---CC--
Q 016974 69 KVYSLDWTSERNRIV--SASQ-------------DGRLIVWNALTS--QKTHAIKLPC------AWVMTCAFS---PT-- 120 (379)
Q Consensus 69 ~v~~~~~~~~~~~l~--s~s~-------------D~~v~iwd~~~~--~~~~~~~~~~------~~v~~~~~s---~~-- 120 (379)
.|..+...+.+++-+ +|-. --+|.+||+.+. +.++++..+. .....+++. |.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 577787777665433 2311 125888999999 9888887653 345666666 32
Q ss_pred --CCEEEEe-eCCCcEEEEEcCCCCCC-----C--CCcceeeeeccc----ccceEEEEEecCC---CceEEEeeCCCeE
Q 016974 121 --GQSVACG-GLDSVCSIFNLNSPTDK-----D--GNLPVSRMLSGH----KGYVSCCQYVPDE---DTHLITSSGDQTC 183 (379)
Q Consensus 121 --g~~l~~~-~~d~~i~iw~~~~~~~~-----~--~~~~~~~~~~~h----~~~v~~~~~~~~~---~~~l~s~~~d~~i 183 (379)
+.++..+ +....+.|+|+.+.... . ..........|. ...+..++.+|+. +..|.-....+ -
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~ 246 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-I 246 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-S
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-C
Confidence 2343333 34677889998764210 0 000001111121 1346667777751 22333222221 1
Q ss_pred EEeecCC-----C---eeEEEecCccccCCccCeEEEEEeCCCCcEEEEecCCCcEEEEEccC-Cc--cceEEEeccc--
Q 016974 184 VLWDITT-----G---LRTSVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRV-AS--RAVRTFHGHE-- 250 (379)
Q Consensus 184 ~~wd~~~-----~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~vwd~~~-~~--~~~~~~~~h~-- 250 (379)
++|.+.+ + .....++ ..+........++.+.++.++++--....|..|+... .- .....+....
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G---~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l 323 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLG---NRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRF 323 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEE---ECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTC
T ss_pred cEEEEEHHHhhCcchhhceEEee---ecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCc
Confidence 2232221 1 0111111 0111122334455445778888888889999999864 21 1222222111
Q ss_pred CCeeEEEEccCCCEEEEe
Q 016974 251 GDVNTVKFFPDGNRFGTG 268 (379)
Q Consensus 251 ~~v~~v~~sp~g~~l~s~ 268 (379)
..+..+.+.++|...+..
T Consensus 324 ~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 324 VFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CSEEEEEECTTSCEEEEE
T ss_pred cccCeEEECCCCeEEEEE
Confidence 235566665555544443
No 409
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=24.83 E-value=77 Score=20.33 Aligned_cols=11 Identities=27% Similarity=0.407 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q 016974 18 TVNSLRERLKQ 28 (379)
Q Consensus 18 ~~~~~~~~~~~ 28 (379)
.+++++.++.+
T Consensus 41 ~I~eLEk~L~e 51 (72)
T 3nmd_A 41 LIDELELELDQ 51 (72)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33334333333
No 410
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=24.73 E-value=1.2e+02 Score=18.04 Aligned_cols=29 Identities=14% Similarity=0.163 Sum_probs=15.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 4 SVSELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
+|.+|++.++.+...+....++.+..++.
T Consensus 13 sV~KLek~ID~LEdeL~~eKek~~~i~~e 41 (52)
T 2z5i_A 13 EVARLKKLVDDLEDELYAQKLKYKAISEE 41 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45555555555555555544444444443
No 411
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.38 E-value=97 Score=28.93 Aligned_cols=68 Identities=15% Similarity=0.064 Sum_probs=41.4
Q ss_pred eEEEEEccCCC--EEEEEEecCcEEEEeCCCc----eEEEecccccCCccCcee-EEEECCCCCeEEEeeCCCcEEE
Q 016974 300 VTSIAFSISGR--LLFAGYSNGDCYVWDTLLA----KVVLNLGSLQNSHEGRIT-CLGLSADGSALCTGSWDTNLKI 369 (379)
Q Consensus 300 v~~~~fs~~g~--~l~sg~~dg~i~iwd~~~~----~~~~~~~~~~~~h~~~v~-~~~~s~d~~~l~s~s~D~~i~v 369 (379)
.++++....+. .++.|+++|.|+=.-+... ....++... ....+|. .+.+++++..|..++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~--~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVF--KDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECC--TTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEee--cCCCccccceEEccCCCeEEEEecccccee
Confidence 45555554443 5777999997653322211 122222111 1235775 8899999999999999887765
No 412
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=23.58 E-value=2.1e+02 Score=27.54 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=42.6
Q ss_pred eEEEEEc----cCCC---EEEEEEecCcEE-EEeCCCce-EEEecccccCCccCceeEEEECCCC--CeEEEeeCCCcEE
Q 016974 300 VTSIAFS----ISGR---LLFAGYSNGDCY-VWDTLLAK-VVLNLGSLQNSHEGRITCLGLSADG--SALCTGSWDTNLK 368 (379)
Q Consensus 300 v~~~~fs----~~g~---~l~sg~~dg~i~-iwd~~~~~-~~~~~~~~~~~h~~~v~~~~~s~d~--~~l~s~s~D~~i~ 368 (379)
.++|+.+ .+|+ .++.|+++|.|. +-...... .+..+..+ ....+|..+.++++. .+|..++.++.++
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~--~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~ 476 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLF--QDFEPVQTLLLSSKKGNRFVYAGSNSGVVQ 476 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECC--TTCCCCCEEEECCSSSSCEEEEECSSCEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEeccc--CCCCcceeeEeccCCCccEEEEEEcCeEEE
Confidence 3555542 3444 678899999764 32222222 22222222 234688899999988 9999999988777
Q ss_pred E
Q 016974 369 I 369 (379)
Q Consensus 369 v 369 (379)
|
T Consensus 477 v 477 (663)
T 1olz_A 477 A 477 (663)
T ss_dssp E
T ss_pred E
Confidence 6
No 413
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=23.00 E-value=1.4e+02 Score=19.41 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+++|+++-..+...+..|.+++...++.+
T Consensus 45 ~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 45 VLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555544
No 414
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=22.69 E-value=1.9e+02 Score=26.64 Aligned_cols=68 Identities=19% Similarity=0.268 Sum_probs=41.3
Q ss_pred eEEEEEccC----CC--EEEEEEecCcEE-EEeCCCce-------EEEecccccCCccCceeEEEECCCCCeEEEeeCCC
Q 016974 300 VTSIAFSIS----GR--LLFAGYSNGDCY-VWDTLLAK-------VVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDT 365 (379)
Q Consensus 300 v~~~~fs~~----g~--~l~sg~~dg~i~-iwd~~~~~-------~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~ 365 (379)
.++|+...- |+ .++.|+++|.|+ +--..... .+.++..+ ....+|..+.++++.++|..++.++
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~--~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF--REPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCS--SSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeec--CCCCccceEEEcCCCCEEEEEECCe
Confidence 456655432 43 577799999765 32211111 11122111 1346899999999999999999998
Q ss_pred cEEE
Q 016974 366 NLKI 369 (379)
Q Consensus 366 ~i~v 369 (379)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 415
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=22.52 E-value=1.4e+02 Score=19.81 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCcch
Q 016974 8 LKERHAAAIETVNSLRERLKQKRQQLLDVDV 38 (379)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (379)
++.+.+.+...++.+.+++.....++.++++
T Consensus 20 eqrEle~le~~Ie~LE~~i~~le~~ladp~~ 50 (89)
T 2lw1_A 20 LQRELEQLPQLLEDLEAKLEALQTQVADASF 50 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3556777778888888888888888776654
No 416
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=22.19 E-value=2.2e+02 Score=26.49 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=40.4
Q ss_pred CeeEEEEccCC--CEEEEeeCCCeEEEEECCCCc----eeEEEeeccCCCCCCCeE-EEEEccCCCEEEEEEecCcEEE
Q 016974 252 DVNTVKFFPDG--NRFGTGSDDGTCRLFDIRTGH----QLQVYYQQHGENEIPHVT-SIAFSISGRLLFAGYSNGDCYV 323 (379)
Q Consensus 252 ~v~~v~~sp~g--~~l~s~s~D~~i~iwd~~~~~----~~~~~~~~~~~~~~~~v~-~~~fs~~g~~l~sg~~dg~i~i 323 (379)
..++|+....+ ..+..|..||.|.=..+.... .+..+.. . ....+|. .+.|++++++|++++.++-++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v-~--~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSV-F--KDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEEC-C--TTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEe-e--cCCCccccceEEccCCCeEEEEecccccee
Confidence 35566655433 346778888886544443221 1121111 1 1123564 7899999999999988765555
No 417
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.16 E-value=2.2e+02 Score=27.31 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=37.1
Q ss_pred EEEEEEecCcEE-EEeCCCc------e-EEEecccccCCccCceeEEEECCCCCeEEEeeCCCcEEE
Q 016974 311 LLFAGYSNGDCY-VWDTLLA------K-VVLNLGSLQNSHEGRITCLGLSADGSALCTGSWDTNLKI 369 (379)
Q Consensus 311 ~l~sg~~dg~i~-iwd~~~~------~-~~~~~~~~~~~h~~~v~~~~~s~d~~~l~s~s~D~~i~v 369 (379)
.++.|+++|.|+ +.-.... . .+.++..+ ....+|..+.++++.+.|..++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~--~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF--REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECS--SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeec--CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 577899999764 3221111 1 11222111 24568999999999999999999988776
No 418
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=22.09 E-value=84 Score=15.49 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 016974 12 HAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
.+++...+++..++++++-+++
T Consensus 4 lnallasleaenkqlkakveel 25 (31)
T 1p9i_A 4 LNALLASLEAENKQLKAKVEEL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555556666654443
No 419
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=21.96 E-value=1.7e+02 Score=19.19 Aligned_cols=27 Identities=19% Similarity=0.367 Sum_probs=14.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016974 3 SSVSELKERHAAAIETVNSLRERLKQK 29 (379)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (379)
..|..++.+-..+.+.+..+++++...
T Consensus 13 ~klq~~E~rN~~Le~~v~~le~~Le~s 39 (79)
T 3cvf_A 13 QKVQDLETRNAELEHQLRAMERSLEEA 39 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 345555555555566666665555443
No 420
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=21.17 E-value=1.2e+02 Score=17.63 Aligned_cols=27 Identities=4% Similarity=0.024 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 6 SELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
.+|-++...++..-..+++++.+.++.
T Consensus 14 ~~L~~kv~~Le~~c~~~eQEieRL~~L 40 (48)
T 3vmx_A 14 IQLATKIQHLEFSCSEKEQEIERLNKL 40 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 334444444444444444454444443
No 421
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=20.97 E-value=2.2e+02 Score=21.36 Aligned_cols=23 Identities=13% Similarity=0.304 Sum_probs=10.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 016974 5 VSELKERHAAAIETVNSLRERLK 27 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~ 27 (379)
+++|+++.....+.++.-.+.++
T Consensus 7 ~~~Le~Ek~~~~~rI~~K~~~Lq 29 (155)
T 2aze_A 7 CQNLEVERQRRLERIKQKQSQLQ 29 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555444444444443
No 422
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.92 E-value=3.4e+02 Score=24.89 Aligned_cols=57 Identities=11% Similarity=0.099 Sum_probs=37.2
Q ss_pred cEEEEecCCCcEEEEEccCCc-------cceEEEec--ccCCeeEEEEccCCCEEEEeeCCCeEEE
Q 016974 220 RMFVSGSCDSTARLWDTRVAS-------RAVRTFHG--HEGDVNTVKFFPDGNRFGTGSDDGTCRL 276 (379)
Q Consensus 220 ~~l~sg~~d~~i~vwd~~~~~-------~~~~~~~~--h~~~v~~v~~sp~g~~l~s~s~D~~i~i 276 (379)
..+..|..+|.|+-.-+.... ..+..++- ...+|..+.++++..+|..++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 456778889987544332111 12233332 3568999999999999999998876665
No 423
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=20.76 E-value=1.6e+02 Score=18.20 Aligned_cols=27 Identities=7% Similarity=0.219 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 6 SELKERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
++|+.+...+...-..|..++...+++
T Consensus 33 ~~Le~~v~~L~~eN~~L~~ev~~Lr~~ 59 (63)
T 2dgc_A 33 KQLEDKVEELLSKNYHLENEVARLKKL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444443
No 424
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=20.69 E-value=1.7e+02 Score=19.06 Aligned_cols=28 Identities=11% Similarity=0.252 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 6 SELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
..|+++...+.+.++.++++..+.+.++
T Consensus 50 ~~L~~~~~~l~~e~~~L~~~~~~L~~~l 77 (83)
T 1nkp_B 50 QYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555555555554443
No 425
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=20.51 E-value=1.1e+02 Score=16.21 Aligned_cols=29 Identities=7% Similarity=0.148 Sum_probs=17.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016974 5 VSELKERHAAAIETVNSLRERLKQKRQQL 33 (379)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (379)
+.|++.+.+++......++.++...++.+
T Consensus 3 MnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 3 LKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 45566666666666666666666655543
No 426
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=20.40 E-value=93 Score=15.33 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016974 7 ELKERHAAAIETVNSLRERLKQK 29 (379)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (379)
-++.+-++++.++.++++++.+.
T Consensus 5 alekkcaalesklqalekkleal 27 (31)
T 3ljm_A 5 ALEKKCAALESKLQALEKKLEAL 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666666666553
No 427
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=20.28 E-value=1.1e+02 Score=18.46 Aligned_cols=24 Identities=8% Similarity=0.008 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 016974 9 KERHAAAIETVNSLRERLKQKRQQ 32 (379)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~ 32 (379)
.+-++...+.++++.++....+++
T Consensus 26 D~FLd~v~~~~~~l~~e~~~L~~~ 49 (57)
T 2wuj_A 26 NEFLAQVRKDYEIVLRKKTELEAK 49 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445554444444443
No 428
>2d8d_A Aroag, phospho-2-dehydro-3-deoxyheptonate aldolase/chori mutase; chorismate, dimer, structural genomics, NPPSFA; 1.15A {Thermus thermophilus} SCOP: a.130.1.1 PDB: 2d8e_A
Probab=20.03 E-value=1.7e+02 Score=19.38 Aligned_cols=27 Identities=11% Similarity=0.127 Sum_probs=19.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016974 1 MSSSVSELKERHAAAIETVNSLRERLK 27 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (379)
|.+.|+++.++++...+++-+|-.+..
T Consensus 1 m~~~L~~lR~~ID~iD~~l~~Ll~~R~ 27 (90)
T 2d8d_A 1 MDERIQALRKEVDRVNREILRLLSERG 27 (90)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556799999999999888877654443
Done!