Query 016977
Match_columns 379
No_of_seqs 195 out of 695
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 06:55:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016977.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016977hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v87a_ g.44.1.1 (A:) Deltex p 99.5 1.8E-15 1.3E-19 122.1 5.2 76 201-276 24-101 (114)
2 d1iyma_ g.44.1.1 (A:) EL5 RING 99.4 2.8E-14 2E-18 104.2 2.8 51 200-268 3-54 (55)
3 d3dplr1 g.44.1.1 (R:19-106) RI 99.4 4.7E-14 3.4E-18 110.6 3.5 64 201-268 20-84 (88)
4 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.4 9.4E-14 6.8E-18 103.6 3.2 57 200-271 1-57 (65)
5 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.3 1.1E-13 8E-18 99.5 2.5 50 204-269 2-51 (52)
6 d1chca_ g.44.1.1 (A:) Immediat 99.3 3.6E-13 2.6E-17 100.9 1.2 48 201-268 4-51 (68)
7 d1fbva4 g.44.1.1 (A:356-434) C 99.2 3.1E-12 2.3E-16 98.7 3.6 49 201-269 22-70 (79)
8 d1vyxa_ g.44.1.3 (A:) IE1B pro 99.0 6.5E-11 4.7E-15 86.3 1.7 54 201-268 5-58 (60)
9 d1rmda2 g.44.1.1 (A:1-86) V(D) 98.9 2E-10 1.5E-14 90.7 2.3 55 201-275 22-76 (86)
10 d2baya1 g.44.1.2 (A:1-56) Pre- 98.9 1.4E-10 1.1E-14 83.9 0.4 46 204-269 2-47 (56)
11 d1jm7a_ g.44.1.1 (A:) brca1 RI 98.9 3E-10 2.2E-14 90.2 2.1 50 201-268 20-69 (103)
12 d1bora_ g.44.1.1 (A:) Acute pr 98.8 1.5E-10 1.1E-14 84.7 -0.2 45 201-269 5-49 (56)
13 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.7 6.4E-10 4.7E-14 87.4 0.5 47 201-269 21-67 (97)
14 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.6 7.6E-09 5.5E-13 78.2 3.2 49 201-269 7-55 (78)
15 d2c2la2 g.44.1.2 (A:225-304) S 98.6 4.7E-09 3.4E-13 79.9 1.8 49 201-269 6-54 (80)
16 d1wima_ g.44.1.1 (A:) UbcM4-in 98.2 8.7E-08 6.3E-12 74.0 0.1 51 201-265 4-58 (94)
17 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.2 4.9E-07 3.6E-11 71.7 4.4 48 201-269 21-69 (98)
18 d1f62a_ g.50.1.2 (A:) Williams 92.8 0.029 2.1E-06 38.3 2.7 30 236-265 20-49 (51)
19 d1we9a_ g.50.1.2 (A:) PHD fing 86.2 0.057 4.2E-06 38.3 -0.4 55 201-268 5-60 (64)
20 d1wesa_ g.50.1.2 (A:) PHD Inhi 84.3 0.19 1.3E-05 37.1 1.7 31 237-269 37-68 (71)
21 d1weva_ g.50.1.2 (A:) PHD fing 83.8 0.07 5.1E-06 39.9 -0.9 33 236-268 38-74 (88)
22 d1wewa_ g.50.1.2 (A:) Sumoylat 80.8 0.39 2.8E-05 35.3 2.3 54 201-269 15-75 (78)
23 d1fp0a1 g.50.1.2 (A:19-88) Nuc 78.8 0.21 1.5E-05 36.2 0.2 33 236-268 24-56 (70)
24 d1wila_ g.50.1.3 (A:) Hypothet 77.5 0.55 4E-05 36.6 2.3 36 199-249 12-47 (89)
25 d1mm2a_ g.50.1.2 (A:) Mi2-beta 73.5 0.2 1.4E-05 35.3 -1.1 32 236-267 26-57 (61)
26 d1weea_ g.50.1.2 (A:) PHD fing 68.0 0.32 2.3E-05 35.0 -1.1 34 236-269 36-69 (72)
27 d2dloa1 g.39.1.3 (A:8-42) Thyr 62.9 0.66 4.8E-05 30.7 -0.2 30 199-245 5-34 (35)
28 d2pnxa1 g.50.1.2 (A:195-245) I 60.3 0.58 4.2E-05 32.1 -0.9 26 238-265 25-50 (51)
29 d1wepa_ g.50.1.2 (A:) PHD fing 55.7 2.7 0.0002 30.6 2.1 33 236-268 32-65 (79)
30 d1wema_ g.50.1.2 (A:) Death as 45.5 2.2 0.00016 30.3 0.1 34 236-269 35-73 (76)
31 d1weoa_ g.44.1.1 (A:) Cellulos 36.8 19 0.0014 27.8 4.4 59 198-269 12-70 (93)
32 d1zbdb_ g.50.1.1 (B:) Effector 32.9 1.8 0.00013 34.0 -2.3 56 201-268 47-102 (124)
33 d2co8a2 g.39.1.3 (A:8-43) Nedd 32.6 6.2 0.00045 25.9 0.8 30 200-245 6-35 (36)
34 d1v6ga1 g.39.1.3 (A:1-41) Acti 30.1 5.1 0.00037 27.1 -0.0 29 200-245 13-41 (41)
35 d6rxna_ g.41.5.1 (A:) Rubredox 29.8 4.6 0.00034 27.5 -0.3 12 257-268 29-40 (45)
36 d1rutx3 g.39.1.3 (X:83-113) LI 28.4 4.8 0.00035 25.7 -0.4 28 203-245 3-30 (31)
37 d2d8ya1 g.39.1.3 (A:9-43) Epli 22.5 10 0.00073 24.6 0.3 29 201-245 6-34 (35)
38 d1x3ha1 g.39.1.3 (A:8-42) Leup 21.8 6.7 0.00049 25.2 -0.7 28 201-245 7-34 (35)
No 1
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1.8e-15 Score=122.13 Aligned_cols=76 Identities=26% Similarity=0.387 Sum_probs=53.5
Q ss_pred CCccccccccchhccCCCcccccc-cCCCCCCceeecCCCHhhHHHHHhhccCCCC-CCCCCcccccccccCCCCchh
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIV-RSGDMPVVGVLSCRHVFHAECLEQTTPKTQK-SDPSCPICLRLQEENSPDQQV 276 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv-~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~-~d~tCPLCRs~~~~~~~~q~~ 276 (379)
....|+||++.|.....+...... ...+...+.+++|||+||.+||++||...+. .+.+||+||+.++.+.++||-
T Consensus 24 ~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~~~~qP~ 101 (114)
T d1v87a_ 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPW 101 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSSSCTT
T ss_pred ccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccCcCCCCC
Confidence 345799999999754333222111 1123445677899999999999999975431 235899999999988777774
No 2
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.41 E-value=2.8e-14 Score=104.22 Aligned_cols=51 Identities=29% Similarity=0.604 Sum_probs=40.5
Q ss_pred CCCccccccccchhccCCCcccccccCCCCCCceee-cCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 200 SDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVL-SCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 200 ~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVL-PCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
.+...|+||+++|.+ .+.+.+| .|||+||.+||.+|+..+ .+||+||..+.
T Consensus 3 ed~~~C~ICl~~~~~--------------~~~~~~l~~C~H~Fh~~Ci~~Wl~~~----~~CP~CR~~i~ 54 (55)
T d1iyma_ 3 DDGVECAVCLAELED--------------GEEARFLPRCGHGFHAECVDMWLGSH----STCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCT--------------TSCCEECSSSCCEECTTHHHHTTTTC----CSCSSSCCCSC
T ss_pred CCCCCCeEECccccC--------------CCEEEEeCCCCCcccHHHHHHHHHhC----CcCCCCCCEeE
Confidence 356679999999982 2235455 699999999999999865 58999998763
No 3
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=4.7e-14 Score=110.57 Aligned_cols=64 Identities=19% Similarity=0.332 Sum_probs=45.6
Q ss_pred CCccccccccchhccCCCcccccccC-CCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRS-GDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~-gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
....|+||++.+.+.++......... .....+.+++|||+||.+||++||..+ .+||+||+.+.
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~~~ 84 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR----QVCPLDNREWE 84 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTC----SBCSSSCSBCC
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHC----CcCCCCCCccc
Confidence 45669999999986554422111111 112246788999999999999999875 48999999986
No 4
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=9.4e-14 Score=103.65 Aligned_cols=57 Identities=18% Similarity=0.335 Sum_probs=43.6
Q ss_pred CCCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccccCC
Q 016977 200 SDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEENS 271 (379)
Q Consensus 200 ~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~~~ 271 (379)
+++..|+||++.+.. ....++.+++|||+||.+||++|+.+.+ .+||+||..+..+.
T Consensus 1 ~dd~~CpIC~~~~~~------------~~~~~~~~~~C~H~fc~~Ci~~~~~~~~---~~CP~CR~~i~~~~ 57 (65)
T d1g25a_ 1 MDDQGCPRCKTTKYR------------NPSLKLMVNVCGHTLCESCVDLLFVRGA---GNCPECGTPLRKSN 57 (65)
T ss_dssp CCTTCCSTTTTHHHH------------CSSCCEEECTTCCCEEHHHHHHHHHTTS---SSCTTTCCCCSSCC
T ss_pred CCCCCCCcCCceeec------------CCceEEEeCccChHhhHHHHHHHhCcCc---CCCCCCCcCccccc
Confidence 467889999998752 1222355679999999999999997643 47999999887543
No 5
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1.1e-13 Score=99.52 Aligned_cols=50 Identities=22% Similarity=0.363 Sum_probs=40.5
Q ss_pred cccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 204 KCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 204 ~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+|+||+++|.. +..++.+++|||+||.+||++|+...+ .+||+||+.+.+
T Consensus 2 eCpICl~~~~~-------------~~~~~~~~~CgH~~c~~C~~~w~~~~~---~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 2 ECPLCMEPLEI-------------DDINFFPCTCGYQICRFCWHRIRTDEN---GLCPACRKPYPE 51 (52)
T ss_dssp EETTTTEECCG-------------GGTTCCSSSSSCCCCHHHHHHHTTTSC---CBCTTTCCBCSC
T ss_pred CCcCCChhhhC-------------CCceEEecCCCCccchHHHHHHHhhcC---CCCCccCCcCCC
Confidence 69999999872 223345679999999999999998654 579999999864
No 6
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.26 E-value=3.6e-13 Score=100.87 Aligned_cols=48 Identities=27% Similarity=0.575 Sum_probs=40.2
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
..+.|+||++.|. + .+.+++|||+||..||++|+.++ .+||+||..+.
T Consensus 4 ~~d~C~IC~~~~~--------------~--~~~~~~C~H~Fc~~Ci~~w~~~~----~~CP~CR~~i~ 51 (68)
T d1chca_ 4 VAERCPICLEDPS--------------N--YSMALPCLHAFCYVCITRWIRQN----PTCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCCC--------------S--CEEETTTTEEESTTHHHHHHHHS----CSTTTTCCCCC
T ss_pred CCCCCccCCcCcc--------------C--CcEEeCCCCcCcHHHHHHHHHhC----CcCCCCCcchH
Confidence 4567999999986 2 25578999999999999999875 58999999875
No 7
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=3.1e-12 Score=98.68 Aligned_cols=49 Identities=22% Similarity=0.491 Sum_probs=40.3
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+...|+||++.+. + ..+++|||+||.+||++|+..+. .+||+||..+..
T Consensus 22 ~~~~C~IC~~~~~--------------~---~~~~~CgH~fC~~Ci~~wl~~~~---~~CP~Cr~~i~~ 70 (79)
T d1fbva4 22 TFQLCKICAENDK--------------D---VKIEPCGHLMCTSCLTSWQESEG---QGCPFCRCEIKG 70 (79)
T ss_dssp CTTBCTTTSSSBC--------------C---EECSSSCCEECHHHHHHHHHTTC---CSCTTTCCCCCC
T ss_pred CCCCCccCCCcCC--------------C---eEEeCCCCeeeHHHHHHHHHHCc---CcCCCCCcCccC
Confidence 3456999998876 2 45789999999999999997543 589999999974
No 8
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.96 E-value=6.5e-11 Score=86.27 Aligned_cols=54 Identities=20% Similarity=0.405 Sum_probs=38.3
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
+...|.||++.+.+. ...+..-..|+|+||..||++|+...+ +.+||+||+.+.
T Consensus 5 d~~~C~IC~~~~~~~------------~~~~c~c~~c~h~~H~~Cl~~W~~~~~--~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 5 DVPVCWICNEELGNE------------RFRACGCTGELENVHRSCLSTWLTISR--NTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEECSCC------------CCCSCCCSSGGGSCCHHHHHHHHHHHT--CSBCTTTCCBCC
T ss_pred CCCCCccCCccCCCc------------eeEecccCCCCCEEcHHHHHHHHhhCC--CCCCcccCCeee
Confidence 567799999987621 111122234579999999999996543 268999999875
No 9
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.89 E-value=2e-10 Score=90.69 Aligned_cols=55 Identities=24% Similarity=0.510 Sum_probs=43.0
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccccCCCCch
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEENSPDQQ 275 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~~~~~q~ 275 (379)
+...|+||++.+. + ..+++|||+|...||++|+...+ ..||+||..+....-.+|
T Consensus 22 ~~l~C~IC~~~~~--------------~---pv~~~CgH~FC~~Ci~~~~~~~~---~~CP~Cr~p~~~~~l~~P 76 (86)
T d1rmda2 22 KSISCQICEHILA--------------D---PVETSCKHLFCRICILRCLKVMG---SYCPSCRYPCFPTDLESP 76 (86)
T ss_dssp HHTBCTTTCSBCS--------------S---EEECTTSCEEEHHHHHHHHHHTC---SBCTTTCCBCCGGGCBCC
T ss_pred cCcCCccCCcchh--------------c---ceecCCCChhhHHHHHHHHhhCC---CcCcccCCCCChhhccCH
Confidence 3456999999887 1 34789999999999999997543 589999998876544444
No 10
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.86 E-value=1.4e-10 Score=83.91 Aligned_cols=46 Identities=22% Similarity=0.207 Sum_probs=37.7
Q ss_pred cccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 204 KCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 204 ~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
.|+||++.+. + .|....|||+|+.+||.+|+.++ .+||+|+..+..
T Consensus 2 ~C~Ic~~~~~--------------~--Pv~~~~cGh~fc~~cI~~~l~~~----~~CP~c~~~l~~ 47 (56)
T d2baya1 2 LCAISGKVPR--------------R--PVLSPKSRTIFEKSLLEQYVKDT----GNDPITNEPLSI 47 (56)
T ss_dssp CCTTTCSCCS--------------S--EEEETTTTEEEEHHHHHHHHHHH----SBCTTTCCBCCG
T ss_pred CCccCCchHH--------------h--cCccCCCCCcccHHHHHHHHhhc----cCCCccCCcCCH
Confidence 5999999987 1 23334699999999999999975 489999998874
No 11
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=3e-10 Score=90.18 Aligned_cols=50 Identities=22% Similarity=0.677 Sum_probs=39.3
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
+...|+||++.|. + + + .++|||+|+..||.+|+...+ ....||+||..+.
T Consensus 20 ~~l~CpIC~~~~~--------------~-p-v-~~~CgH~fC~~Ci~~~~~~~~-~~~~CP~Cr~~~~ 69 (103)
T d1jm7a_ 20 KILECPICLELIK--------------E-P-V-STKCDHIFCKFCMLKLLNQKK-GPSQCPLCKNDIT 69 (103)
T ss_dssp HHTSCSSSCCCCS--------------S-C-C-BCTTSCCCCSHHHHHHHHSSS-SSCCCTTTSCCCC
T ss_pred cCcCCCccCchhC--------------C-e-E-EcCCCCchhhHHHHHHHHHCC-CCCcCcCCCCcCC
Confidence 3456999999887 1 2 2 579999999999999997543 2358999999885
No 12
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=1.5e-10 Score=84.75 Aligned_cols=45 Identities=27% Similarity=0.575 Sum_probs=36.4
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+...|+||++.+. + ..+|+|||+||..||++|. .+||+||..+..
T Consensus 5 ~~l~C~IC~~~~~--------------~---p~~lpCgH~fC~~Ci~~~~-------~~CP~Cr~~~~~ 49 (56)
T d1bora_ 5 QFLRCQQCQAEAK--------------C---PKLLPCLHTLCSGCLEASG-------MQCPICQAPWPL 49 (56)
T ss_dssp CCSSCSSSCSSCB--------------C---CSCSTTSCCSBTTTCSSSS-------SSCSSCCSSSSC
T ss_pred CCCCCcccCcccC--------------C---CEEecCCCHHhHHHHHcCC-------CcCcCCCCcccC
Confidence 3458999999887 1 2368999999999998772 479999999863
No 13
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=6.4e-10 Score=87.41 Aligned_cols=47 Identities=23% Similarity=0.675 Sum_probs=37.5
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+...|+||++.|. + .+.+.+|||+||..||.+|+.. .||+||..+..
T Consensus 21 ~~l~C~IC~~~~~--------------~--pv~~~~CgH~fC~~Ci~~~~~~------~CP~Cr~~~~~ 67 (97)
T d1jm7b_ 21 KLLRCSRCTNILR--------------E--PVCLGGCEHIFCSNCVSDCIGT------GCPVCYTPAWI 67 (97)
T ss_dssp HTTSCSSSCSCCS--------------S--CBCCCSSSCCBCTTTGGGGTTT------BCSSSCCBCSC
T ss_pred hcCCCccCCchhh--------------c--CceeCCCCCchhHHHHHHHHhc------cccccCCcCch
Confidence 3457999999987 1 2434589999999999999853 59999988764
No 14
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.61 E-value=7.6e-09 Score=78.19 Aligned_cols=49 Identities=12% Similarity=0.335 Sum_probs=41.0
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+...|+||++.|. | ..+++|||+|...||++|+.... ..||+|+..+..
T Consensus 7 ~~l~CpIc~~~m~--------------d---PV~~~cgh~fc~~ci~~~~~~~~---~~cP~~~~~l~~ 55 (78)
T d1t1ha_ 7 EYFRCPISLELMK--------------D---PVIVSTGQTYERSSIQKWLDAGH---KTCPKSQETLLH 55 (78)
T ss_dssp SSSSCTTTSCCCS--------------S---EEEETTTEEEEHHHHHHHHTTTC---CBCTTTCCBCSS
T ss_pred ccCCCcCcCchhh--------------C---ceEccCCCcchHHHHHHHHHHCC---CCCCcccccCCc
Confidence 6788999999987 2 23679999999999999997653 579999998864
No 15
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.60 E-value=4.7e-09 Score=79.89 Aligned_cols=49 Identities=8% Similarity=0.158 Sum_probs=40.7
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+...|+||++.|. | + | +++|||+|...||.+|+.... .+||+|+..+..
T Consensus 6 ~~l~CpIc~~l~~--------------d-P-v-~~~cGhtfc~~ci~~~l~~~~---~~cP~c~~~l~~ 54 (80)
T d2c2la2 6 DYLCGKISFELMR--------------E-P-C-ITPSGITYDRKDIEEHLQRVG---HFNPVTRSPLTQ 54 (80)
T ss_dssp STTBCTTTCSBCS--------------S-E-E-ECSSCCEEETTHHHHHHHHTC---SSCTTTCCCCCG
T ss_pred ccccCcCcCchhh--------------h-h-c-ccCCcCeecHHHHHHHHhcCC---ccCCCccccccc
Confidence 5678999999987 2 2 3 689999999999999997653 589999998763
No 16
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.20 E-value=8.7e-08 Score=73.96 Aligned_cols=51 Identities=22% Similarity=0.393 Sum_probs=36.7
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCC----CCCCCCCccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKT----QKSDPSCPICLR 265 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~----~~~d~tCPLCRs 265 (379)
....|+||++++.. ...+.+++|||.|+.+||.+|+... .....+||.|.-
T Consensus 4 ~~~~C~IC~~~~~~--------------~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 4 GSSGCKLCLGEYPV--------------EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp SBCCCSSSCCCCBG--------------GGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCCcCccCCCcccC--------------CceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 45679999998861 2224566899999999999999632 222357998653
No 17
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.20 E-value=4.9e-07 Score=71.67 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=39.3
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCC-CHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCR-HVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCG-HVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
+...|+||++.|. | ..+++|| |+|-..||++|+..+ .+||+|+..+..
T Consensus 21 ~~f~CPI~~~lm~--------------d---PV~~~~~~~ty~r~~I~~~l~~~----~~~P~~~~~l~~ 69 (98)
T d1wgma_ 21 DEFLDPIMSTLMC--------------D---PVVLPSSRVTVDRSTIARHLLSD----QTDPFNRSPLTM 69 (98)
T ss_dssp TTTBCTTTCSBCS--------------S---EEECTTTCCEEEHHHHHHHTTTS----CBCTTTCSBCCT
T ss_pred HHhCCcCchhHHH--------------H---HHhcccccchhhHHHHHHHHHhc----CCcccccccccc
Confidence 5788999999987 2 3367776 589999999999764 589999998864
No 18
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.83 E-value=0.029 Score=38.32 Aligned_cols=30 Identities=27% Similarity=0.662 Sum_probs=24.7
Q ss_pred cCCCHhhHHHHHhhccCCCCCCCCCccccc
Q 016977 236 SCRHVFHAECLEQTTPKTQKSDPSCPICLR 265 (379)
Q Consensus 236 PCGHVFHaeCLeqWL~k~~~~d~tCPLCRs 265 (379)
.|...||..|++.-+......+..||.|+.
T Consensus 20 ~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 20 ECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp TTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 699999999999887665445688999985
No 19
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=86.16 E-value=0.057 Score=38.32 Aligned_cols=55 Identities=22% Similarity=0.477 Sum_probs=34.6
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCC-CCCCCCCcccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKT-QKSDPSCPICLRLQE 268 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~-~~~d~tCPLCRs~~~ 268 (379)
....|.||.+.... +...|.=-.|+.-||..|+..-.... ...+..||.|+...+
T Consensus 5 ~~~~C~~C~~~~~~-------------~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~~~ 60 (64)
T d1we9a_ 5 SSGQCGACGESYAA-------------DEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp SCCCCSSSCCCCCS-------------SSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCcCcCcCCCCCC-------------CCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCcCC
Confidence 45689999987551 11112223799999999997432221 113589999986544
No 20
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.25 E-value=0.19 Score=37.12 Aligned_cols=31 Identities=26% Similarity=0.476 Sum_probs=21.2
Q ss_pred CCC-HhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 237 CRH-VFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 237 CGH-VFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
|-+ -||..||. |......+..||.|+..-+.
T Consensus 37 C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~gp 68 (71)
T d1wesa_ 37 CPIEWFHFSCVS--LTYKPKGKWYCPKCRGDSGP 68 (71)
T ss_dssp CSCCCEETTTTT--CSSCCSSCCCCTTTSSCCSC
T ss_pred CCCcCccCccCC--CCcCCCCcEECcCCccccCc
Confidence 444 59999995 33333346899999876553
No 21
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.82 E-value=0.07 Score=39.93 Aligned_cols=33 Identities=18% Similarity=0.542 Sum_probs=22.8
Q ss_pred cCCCHhhHHHHHhhccC----CCCCCCCCcccccccc
Q 016977 236 SCRHVFHAECLEQTTPK----TQKSDPSCPICLRLQE 268 (379)
Q Consensus 236 PCGHVFHaeCLeqWL~k----~~~~d~tCPLCRs~~~ 268 (379)
.|...||..||...+.. ....+.-||.|.....
T Consensus 38 ~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~ 74 (88)
T d1weva_ 38 ECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp SSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCCccccccCCCcccccccccCCCeEECcccCchHh
Confidence 69999999998755431 1122478999976544
No 22
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=80.77 E-value=0.39 Score=35.26 Aligned_cols=54 Identities=17% Similarity=0.326 Sum_probs=32.3
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceee--cCCCHhhHHHHHhhc----c-CCCCCCCCCccccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVL--SCRHVFHAECLEQTT----P-KTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVL--PCGHVFHaeCLeqWL----~-k~~~~d~tCPLCRs~~~~ 269 (379)
....| ||.+... +...+..- .|..-||..|+.--- . ........||.|+...+.
T Consensus 15 ~~~~C-~C~~~~~--------------~~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~~p 75 (78)
T d1wewa_ 15 IKVRC-VCGNSLE--------------TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCC-SSCCCCC--------------CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CccEe-ECCCccC--------------CCcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcCCC
Confidence 34568 9987755 12223222 499999999985211 0 011123789999877654
No 23
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.77 E-value=0.21 Score=36.24 Aligned_cols=33 Identities=24% Similarity=0.610 Sum_probs=26.4
Q ss_pred cCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 236 SCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 236 PCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
.|...||..|+...+......+..||.|+....
T Consensus 24 ~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 24 QCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp TSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence 699999999999877655445688999976655
No 24
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.50 E-value=0.55 Score=36.61 Aligned_cols=36 Identities=22% Similarity=0.585 Sum_probs=23.8
Q ss_pred CCCCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhh
Q 016977 199 PSDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQT 249 (379)
Q Consensus 199 p~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqW 249 (379)
...+..|.|| +.+.. . +. .--..|+-|||..||++.
T Consensus 12 v~~D~mC~vC-~v~t~------~------~l--~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 12 VVNDEMCDVC-EVWTA------E------SL--FPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCSCCCTTT-CCCCS------S------CC--SSCSSSSSCCCHHHHHHH
T ss_pred CCcCcccccc-Ccccc------c------ce--ecceeecchhhHHHHHHh
Confidence 3577789999 44441 1 11 111258899999999987
No 25
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.49 E-value=0.2 Score=35.33 Aligned_cols=32 Identities=25% Similarity=0.663 Sum_probs=24.7
Q ss_pred cCCCHhhHHHHHhhccCCCCCCCCCccccccc
Q 016977 236 SCRHVFHAECLEQTTPKTQKSDPSCPICLRLQ 267 (379)
Q Consensus 236 PCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~ 267 (379)
.|.-.||..||...+......+..||.|+...
T Consensus 26 ~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~ 57 (61)
T d1mm2a_ 26 TCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCccCchhhcCCCcCcCCCCcEECCCCcCcc
Confidence 68999999999877765444468899997543
No 26
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=67.99 E-value=0.32 Score=34.99 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=24.4
Q ss_pred cCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 236 SCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 236 PCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
.|.--||..|+.--.......+..||.|+.....
T Consensus 36 ~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~~~p 69 (72)
T d1weea_ 36 GCGVWHHTRCIGINNADALPSKFLCFRCIELSGP 69 (72)
T ss_dssp SSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCSS
T ss_pred CCCCcCchhhcCCccccCCCCcEECcCCcCcCCc
Confidence 7889999999865433332345899999877554
No 27
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.89 E-value=0.66 Score=30.69 Aligned_cols=30 Identities=17% Similarity=0.468 Sum_probs=22.4
Q ss_pred CCCCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHH
Q 016977 199 PSDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAEC 245 (379)
Q Consensus 199 p~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeC 245 (379)
....+.|.+|.+.+.+ . + +-..|-.||..|
T Consensus 5 ~~tlEkC~~C~~~I~d--------------r--i-LrA~Gk~yHP~C 34 (35)
T d2dloa1 5 VATLEKCATCSQPILD--------------R--I-LRAMGKAYHPGC 34 (35)
T ss_dssp CSSCCBCTTTCCBCCS--------------C--C-EEETTEEECTTT
T ss_pred HHHHHHHHHhchHHHH--------------H--H-HHHhCCCCCCCC
Confidence 3567889999999882 2 1 337888999887
No 28
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=60.29 E-value=0.58 Score=32.08 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=18.3
Q ss_pred CCHhhHHHHHhhccCCCCCCCCCccccc
Q 016977 238 RHVFHAECLEQTTPKTQKSDPSCPICLR 265 (379)
Q Consensus 238 GHVFHaeCLeqWL~k~~~~d~tCPLCRs 265 (379)
.--||..||. +......+..||.|++
T Consensus 25 ~~WfH~~Cvg--l~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 25 IEWFHFACVG--LTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp SCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCEeCCccC--CCcCCCCcEECcCCCC
Confidence 3469999997 3433334588999986
No 29
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=55.70 E-value=2.7 Score=30.60 Aligned_cols=33 Identities=21% Similarity=0.477 Sum_probs=22.1
Q ss_pred cCCCHhhHHHHHhhccC-CCCCCCCCcccccccc
Q 016977 236 SCRHVFHAECLEQTTPK-TQKSDPSCPICLRLQE 268 (379)
Q Consensus 236 PCGHVFHaeCLeqWL~k-~~~~d~tCPLCRs~~~ 268 (379)
.|.--||..|+.--... ....+..||.|+...+
T Consensus 32 ~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~g 65 (79)
T d1wepa_ 32 LCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp TTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred CCCCcEeccccCcchhcCCCCCEEECccCcCCcC
Confidence 68899999999643221 1112479999987554
No 30
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.48 E-value=2.2 Score=30.33 Aligned_cols=34 Identities=26% Similarity=0.625 Sum_probs=20.8
Q ss_pred cCCCHhhHHHHH----hhc-cCCCCCCCCCccccccccc
Q 016977 236 SCRHVFHAECLE----QTT-PKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 236 PCGHVFHaeCLe----qWL-~k~~~~d~tCPLCRs~~~~ 269 (379)
.|.=-||..|+. ... ......+..||.|+...+.
T Consensus 35 ~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~~~p 73 (76)
T d1wema_ 35 RCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp SSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCCCcCCccccCCCcccccccCCCCCcEECCCCcCcCCC
Confidence 578889999983 111 0011123799999766553
No 31
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=36.81 E-value=19 Score=27.76 Aligned_cols=59 Identities=20% Similarity=0.399 Sum_probs=40.6
Q ss_pred CCCCCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCccccccccc
Q 016977 198 VPSDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQEE 269 (379)
Q Consensus 198 ~p~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~~ 269 (379)
..+..+.|-||.+.+-- ..+++. -|+---|+--.-..|.+-=....+ ..||.|+..+..
T Consensus 12 ~~~~~q~CqiCGd~VG~---------~~~Ge~-FVAC~eC~FPvCrpCyEYErkeG~---q~CpqCkt~Ykr 70 (93)
T d1weoa_ 12 KNLDGQFCEICGDQIGL---------TVEGDL-FVACNECGFPACRPCYEYERREGT---QNCPQCKTRYKR 70 (93)
T ss_dssp SCCSSCBCSSSCCBCCB---------CSSSSB-CCSCSSSCCCCCHHHHHHHHHTSC---SSCTTTCCCCCC
T ss_pred hhcccchhhhccccccc---------CCCCCE-EEEecccCCccchHHHHHHHhccC---ccCcccCChhhh
Confidence 34788899999998751 112221 233335777778899987766654 689999999974
No 32
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=32.94 E-value=1.8 Score=34.04 Aligned_cols=56 Identities=23% Similarity=0.398 Sum_probs=35.4
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHHHHhhccCCCCCCCCCcccccccc
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAECLEQTTPKTQKSDPSCPICLRLQE 268 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeCLeqWL~k~~~~d~tCPLCRs~~~ 268 (379)
....|.+|...|.- . ......=..||++|+..|-..-....+.....|-+|.....
T Consensus 47 ~~~~C~~C~~~f~~---~---------~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k~re 102 (124)
T d1zbdb_ 47 GVNRCILCGEQLGM---L---------GSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQRE 102 (124)
T ss_dssp SSSBCSSSCCBCST---T---------SCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHHH
T ss_pred CCCcCcccCCcccC---C---------CCCCCcCccCCcccccCCCCCccCCCCCCCEECccCcchHH
Confidence 44679999998761 0 11111224799999999965433323223467999998764
No 33
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.61 E-value=6.2 Score=25.85 Aligned_cols=30 Identities=27% Similarity=0.503 Sum_probs=20.7
Q ss_pred CCCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHH
Q 016977 200 SDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAEC 245 (379)
Q Consensus 200 ~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeC 245 (379)
...+.|.+|.+..- -+ -++..=|++||..|
T Consensus 6 g~~~~C~~C~K~VY--------------~~--Erl~a~g~~yHk~C 35 (36)
T d2co8a2 6 GAGDLCALCGEHLY--------------VL--ERLCVNGHFFHRSC 35 (36)
T ss_dssp CSSCBCSSSCCBCC--------------TT--TBCCBTTBCCBTTT
T ss_pred CCCCcccccCCEEe--------------ee--eEEEecCcEecccc
Confidence 35678999998765 11 22345589999888
No 34
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.13 E-value=5.1 Score=27.06 Aligned_cols=29 Identities=24% Similarity=0.574 Sum_probs=20.8
Q ss_pred CCCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHH
Q 016977 200 SDTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAEC 245 (379)
Q Consensus 200 ~~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeC 245 (379)
.-...|..|.+.++ .+++ ..=+|.||.+|
T Consensus 13 ~fG~~C~~C~~~It---------------G~V~--~Ag~~~yHP~C 41 (41)
T d1v6ga1 13 LYGTRCFSCDQFIE---------------GEVV--SALGKTYHPDC 41 (41)
T ss_dssp SCCCBCTTTCCBCC---------------SCCE--EETTEEECTTT
T ss_pred HhCcccccccCEee---------------eeee--EecCcccCCCC
Confidence 56778999999987 2222 23458899887
No 35
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=29.81 E-value=4.6 Score=27.50 Aligned_cols=12 Identities=33% Similarity=0.811 Sum_probs=9.3
Q ss_pred CCCCcccccccc
Q 016977 257 DPSCPICLRLQE 268 (379)
Q Consensus 257 d~tCPLCRs~~~ 268 (379)
+..||+|...-.
T Consensus 29 dw~CP~C~a~K~ 40 (45)
T d6rxna_ 29 DWCCPVCGVSKD 40 (45)
T ss_dssp TCBCTTTCCBGG
T ss_pred CCCCcCCCCcHH
Confidence 478999987643
No 36
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.42 E-value=4.8 Score=25.73 Aligned_cols=28 Identities=21% Similarity=0.609 Sum_probs=18.5
Q ss_pred ccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHH
Q 016977 203 FKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAEC 245 (379)
Q Consensus 203 ~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeC 245 (379)
..|+-|.+.+.. .|. | ...=++|||.+|
T Consensus 3 g~Ca~C~~~I~~------------~e~--V-mRA~~~VyHl~C 30 (31)
T d1rutx3 3 GACSACGQSIPA------------SEL--V-MRAQGNVYHLKC 30 (31)
T ss_dssp EECTTTCCEECT------------TSE--E-EEETTEEECGGG
T ss_pred cccccccCcCCh------------hHh--h-eecccceeeecc
Confidence 358889888761 122 2 234579999998
No 37
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.46 E-value=10 Score=24.57 Aligned_cols=29 Identities=28% Similarity=0.645 Sum_probs=20.2
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHH
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAEC 245 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeC 245 (379)
..+.|.+|.+..- +.-.+..=|++||..|
T Consensus 6 ~~~kC~~C~K~VY----------------~~E~~~a~g~~~Hk~C 34 (35)
T d2d8ya1 6 ARETCVECQKTVY----------------PMERLLANQQVFHISC 34 (35)
T ss_dssp SSCBCTTTCCBCC----------------TTSEEECSSSEEETTT
T ss_pred CCcccccCCCEEe----------------eeeeEecCCeehhhcc
Confidence 4568999988765 1123445679999888
No 38
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.79 E-value=6.7 Score=25.16 Aligned_cols=28 Identities=32% Similarity=0.602 Sum_probs=20.3
Q ss_pred CCccccccccchhccCCCcccccccCCCCCCceeecCCCHhhHHH
Q 016977 201 DTFKCGLCERFLSQRSPWSSRRIVRSGDMPVVGVLSCRHVFHAEC 245 (379)
Q Consensus 201 ~~~~CaICle~LsqrsP~ss~~iv~~gD~~vVaVLPCGHVFHaeC 245 (379)
-...|..|.+++.. +. +-..|..||.+|
T Consensus 7 fapkC~~C~~~I~g---------------~~--v~Al~~~wHpeC 34 (35)
T d1x3ha1 7 FSPKCGGCNRPVLE---------------NY--LSAMDTVWHPEC 34 (35)
T ss_dssp CSCBCTTTCCBCCS---------------SC--EEETTEEECTTT
T ss_pred hChhhhhcCCcccc---------------hh--eeecCCccCccc
Confidence 34679999999872 12 346688899888
Done!