Query 016978
Match_columns 379
No_of_seqs 135 out of 1450
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:32:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016978.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016978hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 5.1E-69 1.1E-73 467.7 33.6 374 4-377 2-375 (375)
2 COG1062 AdhC Zn-dependent alco 100.0 5.8E-69 1.3E-73 475.2 33.3 366 8-377 1-366 (366)
3 COG1064 AdhP Zn-dependent alco 100.0 8.4E-67 1.8E-71 472.1 33.1 335 7-378 1-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 7.2E-61 1.6E-65 420.1 30.7 342 8-379 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.1E-59 2.4E-64 411.4 30.8 349 1-378 1-355 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 2E-56 4.2E-61 427.1 36.5 374 4-377 5-381 (381)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.7E-56 8.1E-61 423.2 35.9 367 10-377 2-368 (368)
8 cd08300 alcohol_DH_class_III c 100.0 1.5E-55 3.3E-60 419.4 36.5 367 9-376 2-368 (368)
9 cd08301 alcohol_DH_plants Plan 100.0 2.5E-55 5.5E-60 418.2 36.0 369 8-376 1-369 (369)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 5.5E-55 1.2E-59 416.0 35.5 360 10-374 1-370 (371)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.6E-54 7.9E-59 408.5 34.5 356 9-377 1-358 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 8.8E-54 1.9E-58 407.8 36.3 365 8-378 11-377 (378)
13 cd08277 liver_alcohol_DH_like 100.0 3E-53 6.5E-58 403.1 35.7 365 8-376 1-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 1.3E-52 2.9E-57 395.2 33.7 337 10-377 1-339 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 3.3E-51 7.1E-56 386.1 32.9 336 8-377 3-343 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 5.5E-51 1.2E-55 383.0 33.0 341 10-377 1-350 (350)
17 TIGR02819 fdhA_non_GSH formald 100.0 1.1E-50 2.3E-55 387.4 32.1 346 9-378 2-391 (393)
18 COG0604 Qor NADPH:quinone redu 100.0 1.3E-50 2.8E-55 375.6 29.6 315 10-377 1-326 (326)
19 PLN02586 probable cinnamyl alc 100.0 2.2E-49 4.8E-54 375.4 32.8 338 5-377 8-353 (360)
20 cd08299 alcohol_DH_class_I_II_ 100.0 1.3E-48 2.9E-53 371.9 37.0 368 7-377 5-373 (373)
21 PRK10309 galactitol-1-phosphat 100.0 7.6E-49 1.6E-53 370.8 33.6 338 10-377 1-346 (347)
22 PLN02178 cinnamyl-alcohol dehy 100.0 3.5E-48 7.7E-53 368.3 33.1 332 12-378 9-349 (375)
23 TIGR03201 dearomat_had 6-hydro 100.0 4.1E-48 9E-53 365.8 32.5 333 13-377 2-349 (349)
24 cd05279 Zn_ADH1 Liver alcohol 100.0 1.2E-47 2.5E-52 364.8 35.2 364 10-376 1-365 (365)
25 cd08230 glucose_DH Glucose deh 100.0 4.2E-48 9.1E-53 366.7 31.7 334 10-377 1-355 (355)
26 PLN02514 cinnamyl-alcohol dehy 100.0 2.5E-47 5.5E-52 361.2 33.8 347 1-378 1-351 (357)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.3E-47 2.8E-52 359.1 31.1 321 13-376 2-329 (329)
28 cd08231 MDR_TM0436_like Hypoth 100.0 6.6E-47 1.4E-51 359.5 33.9 348 11-377 2-361 (361)
29 cd08233 butanediol_DH_like (2R 100.0 9.9E-47 2.1E-51 356.9 33.4 335 10-376 1-351 (351)
30 KOG1197 Predicted quinone oxid 100.0 2.2E-47 4.7E-52 322.8 23.3 316 5-378 4-331 (336)
31 cd08278 benzyl_alcohol_DH Benz 100.0 6.7E-46 1.5E-50 352.7 34.1 362 8-376 1-365 (365)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 1.3E-45 2.9E-50 349.2 34.6 342 10-377 1-351 (351)
33 cd08237 ribitol-5-phosphate_DH 100.0 4.4E-46 9.6E-51 350.5 27.2 320 10-378 3-340 (341)
34 cd08279 Zn_ADH_class_III Class 100.0 1.3E-44 2.8E-49 343.8 34.8 360 10-375 1-362 (363)
35 PRK10083 putative oxidoreducta 100.0 1.1E-44 2.4E-49 341.3 33.4 334 10-379 1-339 (339)
36 cd08238 sorbose_phosphate_red 100.0 8.2E-45 1.8E-49 350.0 32.1 331 8-378 1-369 (410)
37 cd05278 FDH_like Formaldehyde 100.0 7.1E-44 1.5E-48 336.8 35.0 340 10-376 1-346 (347)
38 cd08296 CAD_like Cinnamyl alco 100.0 6E-44 1.3E-48 335.4 33.0 330 10-376 1-333 (333)
39 cd08283 FDH_like_1 Glutathione 100.0 2.2E-43 4.8E-48 337.7 34.7 349 10-377 1-386 (386)
40 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.6E-43 5.7E-48 333.4 34.1 336 10-375 1-350 (350)
41 cd08286 FDH_like_ADH2 formalde 100.0 4.3E-43 9.3E-48 331.3 33.9 337 10-377 1-345 (345)
42 TIGR01202 bchC 2-desacetyl-2-h 100.0 8.5E-44 1.9E-48 330.4 28.0 302 9-376 1-308 (308)
43 cd05284 arabinose_DH_like D-ar 100.0 7.4E-43 1.6E-47 329.0 33.0 333 10-377 1-340 (340)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.6E-42 3.5E-47 327.4 33.6 339 10-376 1-344 (345)
45 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.5E-42 3.2E-47 330.2 33.2 360 10-376 1-367 (367)
46 cd08240 6_hydroxyhexanoate_dh_ 100.0 2E-42 4.4E-47 327.3 33.5 336 10-376 1-349 (350)
47 cd08284 FDH_like_2 Glutathione 100.0 7.9E-42 1.7E-46 322.5 33.5 338 10-376 1-343 (344)
48 cd08246 crotonyl_coA_red croto 100.0 6.2E-42 1.3E-46 328.9 32.6 340 6-375 9-391 (393)
49 PLN02702 L-idonate 5-dehydroge 100.0 1.3E-41 2.9E-46 323.3 33.7 338 8-376 16-363 (364)
50 cd08282 PFDH_like Pseudomonas 100.0 1.2E-41 2.7E-46 324.7 33.2 343 10-377 1-375 (375)
51 PRK05396 tdh L-threonine 3-deh 100.0 1.6E-41 3.4E-46 320.1 33.5 336 10-378 1-341 (341)
52 cd08291 ETR_like_1 2-enoyl thi 100.0 4.1E-42 9E-47 321.8 29.0 309 10-376 1-324 (324)
53 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.4E-41 7.3E-46 317.3 33.9 333 10-377 1-337 (337)
54 cd08287 FDH_like_ADH3 formalde 100.0 3.7E-41 8.1E-46 318.1 33.4 334 10-376 1-344 (345)
55 cd08235 iditol_2_DH_like L-idi 100.0 3.9E-41 8.5E-46 317.6 33.2 335 10-376 1-343 (343)
56 TIGR01751 crot-CoA-red crotony 100.0 4.1E-41 9E-46 323.4 32.5 344 5-378 3-388 (398)
57 cd08242 MDR_like Medium chain 100.0 5.4E-41 1.2E-45 313.6 32.3 316 10-376 1-318 (319)
58 cd08262 Zn_ADH8 Alcohol dehydr 100.0 7.7E-41 1.7E-45 315.4 32.6 324 10-376 1-341 (341)
59 PRK13771 putative alcohol dehy 100.0 4E-41 8.7E-46 316.4 30.4 329 10-377 1-333 (334)
60 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.4E-40 2.9E-45 318.4 32.9 336 10-375 29-383 (384)
61 PRK09422 ethanol-active dehydr 100.0 1.7E-40 3.7E-45 312.6 32.9 333 10-378 1-337 (338)
62 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.8E-40 3.9E-45 312.3 32.4 333 10-377 1-338 (338)
63 cd05285 sorbitol_DH Sorbitol d 100.0 1.9E-40 4.1E-45 313.0 32.4 331 12-375 1-341 (343)
64 cd05281 TDH Threonine dehydrog 100.0 3.5E-40 7.6E-45 310.9 33.4 335 10-376 1-340 (341)
65 cd05283 CAD1 Cinnamyl alcohol 100.0 2E-40 4.2E-45 312.1 30.8 334 11-376 1-337 (337)
66 cd08236 sugar_DH NAD(P)-depend 100.0 4.4E-40 9.6E-45 310.5 32.8 336 10-375 1-343 (343)
67 PLN03154 putative allyl alcoho 100.0 3.4E-40 7.3E-45 311.2 29.6 316 6-379 5-347 (348)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 1.2E-39 2.5E-44 307.4 33.3 334 10-377 1-341 (341)
69 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9E-40 1.9E-44 306.7 32.3 329 10-376 1-332 (332)
70 TIGR03366 HpnZ_proposed putati 100.0 4.5E-41 9.8E-46 308.1 22.1 269 66-358 1-280 (280)
71 cd08292 ETR_like_2 2-enoyl thi 100.0 5.3E-40 1.2E-44 307.3 29.7 309 10-376 1-324 (324)
72 cd08232 idonate-5-DH L-idonate 100.0 1.3E-39 2.8E-44 306.8 32.0 331 14-377 2-339 (339)
73 KOG0025 Zn2+-binding dehydroge 100.0 1.2E-39 2.6E-44 280.8 26.9 320 2-378 12-353 (354)
74 cd08234 threonine_DH_like L-th 100.0 4.7E-39 1E-43 302.4 32.3 331 10-375 1-333 (334)
75 TIGR00692 tdh L-threonine 3-de 100.0 7.5E-39 1.6E-43 301.8 32.4 332 16-377 5-340 (340)
76 cd08295 double_bond_reductase_ 100.0 2.3E-39 5E-44 304.9 28.2 311 9-377 7-338 (338)
77 cd08266 Zn_ADH_like1 Alcohol d 100.0 8.3E-39 1.8E-43 300.9 31.5 335 10-377 1-342 (342)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 4.8E-39 1E-43 301.1 29.4 320 10-373 1-324 (325)
79 cd08293 PTGR2 Prostaglandin re 100.0 6.8E-39 1.5E-43 302.6 30.0 299 22-377 23-345 (345)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 2.3E-38 4.9E-43 297.1 31.3 323 10-375 1-329 (329)
81 cd08294 leukotriene_B4_DH_like 100.0 1.7E-38 3.7E-43 297.8 28.7 304 9-377 2-329 (329)
82 cd08245 CAD Cinnamyl alcohol d 100.0 3.1E-38 6.7E-43 296.3 30.2 327 11-375 1-330 (330)
83 cd08274 MDR9 Medium chain dehy 100.0 2.2E-38 4.8E-43 299.7 29.4 323 10-377 1-350 (350)
84 TIGR02825 B4_12hDH leukotriene 100.0 1.8E-38 3.9E-43 297.3 27.7 291 22-376 19-325 (325)
85 PRK10754 quinone oxidoreductas 100.0 5.6E-38 1.2E-42 294.2 29.0 314 9-376 1-326 (327)
86 cd08290 ETR 2-enoyl thioester 100.0 1E-37 2.3E-42 294.1 27.8 312 10-377 1-341 (341)
87 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.7E-37 5.9E-42 286.7 29.4 300 10-341 1-306 (306)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 3E-37 6.5E-42 290.3 28.0 308 11-376 1-334 (336)
89 cd08244 MDR_enoyl_red Possible 100.0 1.9E-36 4E-41 283.3 31.0 312 10-377 1-324 (324)
90 cd08249 enoyl_reductase_like e 100.0 1.6E-36 3.6E-41 285.6 30.1 315 10-377 1-339 (339)
91 cd08250 Mgc45594_like Mgc45594 100.0 1.1E-36 2.4E-41 285.7 28.5 311 9-376 1-329 (329)
92 PTZ00354 alcohol dehydrogenase 100.0 2.5E-36 5.4E-41 283.6 29.9 313 9-378 1-329 (334)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 5.1E-36 1.1E-40 280.5 31.3 313 10-377 1-325 (325)
94 KOG1198 Zinc-binding oxidoredu 100.0 8.6E-37 1.9E-41 283.3 25.2 301 22-379 20-347 (347)
95 cd08276 MDR7 Medium chain dehy 100.0 8.4E-36 1.8E-40 280.1 32.3 330 10-377 1-336 (336)
96 cd05282 ETR_like 2-enoyl thioe 100.0 1.2E-35 2.7E-40 277.6 28.2 298 22-376 14-323 (323)
97 cd08243 quinone_oxidoreductase 100.0 2.1E-35 4.5E-40 275.5 29.0 311 10-375 1-319 (320)
98 cd08270 MDR4 Medium chain dehy 100.0 2.4E-35 5.2E-40 273.6 28.1 297 10-377 1-305 (305)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 4.5E-35 9.7E-40 272.5 29.9 302 16-375 2-311 (312)
100 TIGR02823 oxido_YhdH putative 100.0 1.1E-34 2.4E-39 271.4 30.9 311 11-377 1-323 (323)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 9.5E-35 2.1E-39 272.1 30.2 314 10-377 1-326 (326)
102 cd08252 AL_MDR Arginate lyase 100.0 9.5E-35 2E-39 273.3 29.9 312 10-376 1-336 (336)
103 cd08248 RTN4I1 Human Reticulon 100.0 6.6E-35 1.4E-39 275.9 25.1 311 10-376 1-350 (350)
104 cd08247 AST1_like AST1 is a cy 100.0 7.7E-34 1.7E-38 268.9 27.7 317 11-377 2-352 (352)
105 cd08288 MDR_yhdh Yhdh putative 100.0 2.6E-33 5.6E-38 262.2 30.9 312 10-377 1-324 (324)
106 cd05276 p53_inducible_oxidored 100.0 1.9E-33 4E-38 262.0 29.0 309 10-375 1-323 (323)
107 cd08253 zeta_crystallin Zeta-c 100.0 2E-33 4.4E-38 262.1 29.0 315 10-377 1-325 (325)
108 cd05286 QOR2 Quinone oxidoredu 100.0 3.6E-33 7.8E-38 259.7 30.4 308 11-376 1-319 (320)
109 COG2130 Putative NADP-dependen 100.0 3.1E-33 6.7E-38 243.7 25.4 298 22-379 27-340 (340)
110 cd08272 MDR6 Medium chain dehy 100.0 4.2E-33 9.2E-38 260.3 28.4 311 10-377 1-326 (326)
111 cd08271 MDR5 Medium chain dehy 100.0 7.6E-33 1.6E-37 258.7 29.7 314 10-377 1-325 (325)
112 cd08273 MDR8 Medium chain dehy 100.0 7.4E-33 1.6E-37 259.8 28.8 305 11-375 2-330 (331)
113 cd05188 MDR Medium chain reduc 100.0 3E-33 6.5E-38 254.5 24.6 268 36-337 1-270 (271)
114 cd05288 PGDH Prostaglandin deh 100.0 5.9E-33 1.3E-37 260.3 27.2 304 11-375 3-329 (329)
115 cd08268 MDR2 Medium chain dehy 100.0 4.6E-32 1E-36 253.4 30.2 315 10-376 1-327 (328)
116 cd08251 polyketide_synthase po 100.0 2.7E-32 5.9E-37 252.2 27.0 292 29-375 2-303 (303)
117 TIGR02824 quinone_pig3 putativ 100.0 5.6E-32 1.2E-36 252.5 29.3 311 10-377 1-325 (325)
118 cd05289 MDR_like_2 alcohol deh 100.0 5.7E-32 1.2E-36 250.7 25.4 301 10-375 1-309 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 4.6E-31 1E-35 246.0 28.5 309 10-376 1-323 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 9.9E-31 2.1E-35 245.7 30.4 310 11-377 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 3.3E-31 7.1E-36 247.0 26.1 295 23-375 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.5E-30 3.2E-35 238.8 23.5 282 35-375 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 7.5E-30 1.6E-34 233.8 23.8 277 39-375 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 1.4E-27 3E-32 218.5 22.6 250 56-375 14-277 (277)
125 KOG1202 Animal-type fatty acid 100.0 1.5E-27 3.2E-32 236.1 16.2 292 22-377 1429-1741(2376)
126 KOG1196 Predicted NAD-dependen 99.9 7.4E-25 1.6E-29 190.7 25.3 296 23-378 25-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 3.3E-23 7.1E-28 162.0 7.6 108 34-163 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 3.7E-17 7.9E-22 132.0 12.0 127 205-339 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.2E-12 2.7E-17 123.9 14.7 175 183-378 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 2.2E-11 4.8E-16 118.3 15.8 153 192-350 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.8E-12 3.9E-17 104.0 2.7 120 238-375 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 2.7E-07 5.8E-12 84.2 9.7 167 189-369 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 9.1E-07 2E-11 86.1 12.1 106 193-300 162-288 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.4 4.9E-06 1.1E-10 79.5 13.5 103 182-299 198-302 (425)
135 TIGR01035 hemA glutamyl-tRNA r 98.3 5.7E-08 1.2E-12 93.7 -3.3 159 66-276 89-252 (417)
136 TIGR00936 ahcY adenosylhomocys 98.2 1.5E-05 3.3E-10 75.7 12.2 102 183-299 182-285 (406)
137 PF11017 DUF2855: Protein of u 98.2 8E-05 1.7E-09 67.9 14.7 140 148-300 90-235 (314)
138 PRK00517 prmA ribosomal protei 98.1 2E-05 4.4E-10 70.8 10.1 133 148-298 78-215 (250)
139 PRK08306 dipicolinate synthase 98.1 5.1E-05 1.1E-09 69.8 12.8 95 194-300 151-245 (296)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.1E-05 2.4E-10 74.9 8.3 108 158-277 139-251 (311)
141 PLN02494 adenosylhomocysteinas 98.1 3E-05 6.4E-10 74.5 11.2 101 183-298 241-343 (477)
142 TIGR00518 alaDH alanine dehydr 97.8 0.00014 3E-09 69.1 10.8 98 194-299 166-270 (370)
143 PTZ00075 Adenosylhomocysteinas 97.8 0.00014 3E-09 70.1 10.0 101 184-299 242-344 (476)
144 PRK08324 short chain dehydroge 97.7 0.0002 4.3E-09 73.9 11.0 138 147-298 385-559 (681)
145 COG2518 Pcm Protein-L-isoaspar 97.7 0.00019 4E-09 61.5 8.5 111 172-295 52-168 (209)
146 TIGR00406 prmA ribosomal prote 97.7 0.00023 4.9E-09 65.4 9.5 97 192-298 157-261 (288)
147 PRK12771 putative glutamate sy 97.6 5.6E-05 1.2E-09 76.2 4.9 80 191-276 133-234 (564)
148 PRK00045 hemA glutamyl-tRNA re 97.5 0.00016 3.4E-09 70.2 6.5 158 67-276 92-254 (423)
149 TIGR02853 spore_dpaA dipicolin 97.5 0.0011 2.4E-08 60.7 11.5 94 194-299 150-243 (287)
150 COG4221 Short-chain alcohol de 97.5 0.00059 1.3E-08 59.6 8.9 79 194-274 5-91 (246)
151 PF01488 Shikimate_DH: Shikima 97.5 0.00053 1.1E-08 55.4 8.2 74 194-276 11-87 (135)
152 COG3967 DltE Short-chain dehyd 97.4 0.001 2.2E-08 56.3 8.7 79 194-274 4-88 (245)
153 PRK05693 short chain dehydroge 97.4 0.0024 5.1E-08 58.1 11.5 77 196-274 2-82 (274)
154 KOG1209 1-Acyl dihydroxyaceton 97.3 0.0022 4.7E-08 54.6 9.8 104 194-299 6-141 (289)
155 PRK00377 cbiT cobalt-precorrin 97.3 0.0033 7.2E-08 54.3 11.1 102 188-295 34-144 (198)
156 PRK05786 fabG 3-ketoacyl-(acyl 97.3 0.0041 9E-08 55.1 11.7 102 194-298 4-137 (238)
157 PRK11705 cyclopropane fatty ac 97.2 0.0017 3.6E-08 62.1 9.1 109 178-296 151-267 (383)
158 PRK13943 protein-L-isoaspartat 97.2 0.0029 6.3E-08 58.8 10.4 102 187-295 73-179 (322)
159 PRK05993 short chain dehydroge 97.2 0.0033 7.2E-08 57.3 10.6 79 194-274 3-86 (277)
160 COG2242 CobL Precorrin-6B meth 97.2 0.0053 1.1E-07 51.6 10.3 104 187-297 27-136 (187)
161 COG0300 DltE Short-chain dehyd 97.1 0.0042 9.1E-08 55.6 10.0 80 193-274 4-94 (265)
162 TIGR00438 rrmJ cell division p 97.1 0.0073 1.6E-07 51.7 11.2 101 190-296 28-146 (188)
163 PRK06182 short chain dehydroge 97.1 0.0035 7.5E-08 57.0 9.2 79 194-274 2-84 (273)
164 PF13460 NAD_binding_10: NADH( 97.0 0.0071 1.5E-07 51.2 10.4 93 198-299 1-100 (183)
165 KOG1205 Predicted dehydrogenas 97.0 0.0064 1.4E-07 54.9 10.3 105 194-300 11-153 (282)
166 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0047 1E-07 52.4 8.8 89 192-295 33-126 (178)
167 PRK07326 short chain dehydroge 97.0 0.011 2.5E-07 52.2 11.5 79 194-274 5-92 (237)
168 PRK04148 hypothetical protein; 96.9 0.005 1.1E-07 49.1 7.6 94 193-295 15-108 (134)
169 PRK12742 oxidoreductase; Provi 96.9 0.023 4.9E-07 50.3 12.7 101 194-299 5-134 (237)
170 PRK14967 putative methyltransf 96.9 0.058 1.3E-06 47.5 15.2 98 188-295 30-158 (223)
171 PRK08017 oxidoreductase; Provi 96.9 0.0077 1.7E-07 54.0 9.8 77 196-274 3-84 (256)
172 PRK06139 short chain dehydroge 96.8 0.0053 1.2E-07 57.6 8.4 79 194-274 6-94 (330)
173 COG1748 LYS9 Saccharopine dehy 96.7 0.017 3.6E-07 54.7 11.1 96 196-298 2-101 (389)
174 TIGR02469 CbiT precorrin-6Y C5 96.7 0.0063 1.4E-07 47.8 7.2 101 187-295 12-121 (124)
175 PF00670 AdoHcyase_NAD: S-aden 96.7 0.011 2.3E-07 48.7 8.6 92 192-298 20-112 (162)
176 COG4122 Predicted O-methyltran 96.7 0.014 3.1E-07 50.7 9.8 104 190-296 55-166 (219)
177 PF01135 PCMT: Protein-L-isoas 96.7 0.0025 5.5E-08 55.3 5.2 101 186-295 64-171 (209)
178 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.02 4.3E-07 56.1 12.2 80 193-274 208-294 (450)
179 PF12847 Methyltransf_18: Meth 96.7 0.014 2.9E-07 45.1 8.8 92 194-294 1-109 (112)
180 PRK08177 short chain dehydroge 96.7 0.011 2.4E-07 52.0 9.3 77 196-274 2-81 (225)
181 PRK13942 protein-L-isoaspartat 96.7 0.018 3.9E-07 50.3 10.4 101 186-295 68-175 (212)
182 PRK07806 short chain dehydroge 96.7 0.024 5.2E-07 50.5 11.6 101 194-297 5-135 (248)
183 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0056 1.2E-07 51.4 6.9 101 195-298 20-141 (168)
184 PRK06057 short chain dehydroge 96.7 0.011 2.4E-07 53.0 9.3 79 194-274 6-89 (255)
185 PRK07576 short chain dehydroge 96.7 0.03 6.5E-07 50.6 12.1 78 194-273 8-95 (264)
186 PRK07109 short chain dehydroge 96.6 0.024 5.2E-07 53.2 11.4 79 194-274 7-95 (334)
187 PLN03209 translocon at the inn 96.6 0.037 8.1E-07 55.1 13.0 47 188-235 73-120 (576)
188 PRK08628 short chain dehydroge 96.6 0.029 6.2E-07 50.4 11.5 79 194-274 6-93 (258)
189 PRK07060 short chain dehydroge 96.6 0.015 3.2E-07 51.7 9.4 77 194-274 8-87 (245)
190 PRK08265 short chain dehydroge 96.6 0.029 6.3E-07 50.6 11.4 79 194-274 5-90 (261)
191 PF02353 CMAS: Mycolic acid cy 96.6 0.015 3.1E-07 52.9 9.2 101 185-297 53-167 (273)
192 PRK13944 protein-L-isoaspartat 96.6 0.015 3.2E-07 50.5 8.9 101 186-295 64-172 (205)
193 PF06325 PrmA: Ribosomal prote 96.5 0.0093 2E-07 54.6 7.7 126 156-299 127-262 (295)
194 PRK12829 short chain dehydroge 96.5 0.011 2.3E-07 53.3 8.2 82 191-274 7-96 (264)
195 PRK12828 short chain dehydroge 96.5 0.014 3.1E-07 51.5 8.8 79 194-274 6-92 (239)
196 PRK13940 glutamyl-tRNA reducta 96.5 0.014 3.1E-07 56.2 9.0 77 193-278 179-256 (414)
197 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.011 2.3E-07 53.4 7.8 78 194-273 4-88 (262)
198 PRK06953 short chain dehydroge 96.5 0.022 4.7E-07 50.0 9.6 77 196-274 2-80 (222)
199 PRK06949 short chain dehydroge 96.5 0.016 3.5E-07 51.9 8.8 80 193-274 7-96 (258)
200 PRK06841 short chain dehydroge 96.5 0.016 3.5E-07 51.9 8.8 79 194-274 14-99 (255)
201 PLN02780 ketoreductase/ oxidor 96.5 0.021 4.7E-07 53.2 9.8 80 194-274 52-142 (320)
202 PRK05872 short chain dehydroge 96.4 0.019 4E-07 53.0 9.2 79 194-274 8-95 (296)
203 PRK07814 short chain dehydroge 96.4 0.016 3.5E-07 52.3 8.7 79 194-274 9-97 (263)
204 PRK06200 2,3-dihydroxy-2,3-dih 96.4 0.018 3.9E-07 51.9 9.0 79 194-274 5-90 (263)
205 PRK07831 short chain dehydroge 96.4 0.02 4.4E-07 51.5 9.3 81 192-274 14-107 (262)
206 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.026 5.6E-07 47.2 9.0 97 172-298 21-118 (168)
207 PRK12939 short chain dehydroge 96.4 0.04 8.6E-07 49.0 10.9 79 194-274 6-94 (250)
208 PRK07825 short chain dehydroge 96.4 0.022 4.7E-07 51.7 9.2 78 195-274 5-88 (273)
209 PRK08339 short chain dehydroge 96.4 0.025 5.4E-07 51.1 9.4 79 194-274 7-95 (263)
210 PRK03369 murD UDP-N-acetylmura 96.3 0.021 4.5E-07 56.6 9.5 73 192-275 9-81 (488)
211 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.0085 1.8E-07 58.8 6.7 93 188-298 27-125 (450)
212 PRK07402 precorrin-6B methylas 96.3 0.076 1.7E-06 45.7 11.9 104 186-297 32-143 (196)
213 PRK00811 spermidine synthase; 96.3 0.025 5.4E-07 51.8 9.2 99 194-295 76-190 (283)
214 PRK06180 short chain dehydroge 96.3 0.024 5.2E-07 51.6 9.1 79 194-274 3-88 (277)
215 COG0169 AroE Shikimate 5-dehyd 96.3 0.011 2.3E-07 53.8 6.5 44 194-237 125-168 (283)
216 TIGR02356 adenyl_thiF thiazole 96.3 0.035 7.7E-07 48.1 9.5 35 194-228 20-54 (202)
217 PRK05867 short chain dehydroge 96.3 0.022 4.8E-07 51.0 8.5 79 194-274 8-96 (253)
218 TIGR01470 cysG_Nterm siroheme 96.3 0.24 5.2E-06 43.0 14.6 93 194-297 8-101 (205)
219 PRK07231 fabG 3-ketoacyl-(acyl 96.3 0.018 4E-07 51.2 8.0 79 194-274 4-91 (251)
220 COG2519 GCD14 tRNA(1-methylade 96.3 0.032 7E-07 49.1 9.0 104 186-297 86-196 (256)
221 TIGR01832 kduD 2-deoxy-D-gluco 96.2 0.028 6.1E-07 50.1 9.1 79 194-274 4-90 (248)
222 cd05311 NAD_bind_2_malic_enz N 96.2 0.046 9.9E-07 48.2 10.0 93 193-297 23-129 (226)
223 PRK12549 shikimate 5-dehydroge 96.2 0.037 7.9E-07 50.7 9.7 44 193-236 125-168 (284)
224 PF13241 NAD_binding_7: Putati 96.2 0.012 2.6E-07 45.0 5.5 89 194-299 6-94 (103)
225 PRK06718 precorrin-2 dehydroge 96.2 0.22 4.7E-06 43.1 14.0 91 194-297 9-101 (202)
226 TIGR00080 pimt protein-L-isoas 96.2 0.012 2.6E-07 51.6 6.1 101 186-295 69-176 (215)
227 PRK09072 short chain dehydroge 96.2 0.035 7.7E-07 50.0 9.4 79 194-274 4-90 (263)
228 PRK07774 short chain dehydroge 96.2 0.03 6.5E-07 49.9 8.9 79 194-274 5-93 (250)
229 PRK06484 short chain dehydroge 96.2 0.065 1.4E-06 53.6 12.2 103 193-298 267-402 (520)
230 PRK06128 oxidoreductase; Provi 96.2 0.064 1.4E-06 49.5 11.2 102 194-298 54-193 (300)
231 PRK14175 bifunctional 5,10-met 96.2 0.039 8.4E-07 50.2 9.4 95 173-298 136-232 (286)
232 PRK09291 short chain dehydroge 96.1 0.03 6.4E-07 50.2 8.8 74 195-274 2-83 (257)
233 KOG1014 17 beta-hydroxysteroid 96.1 0.039 8.4E-07 50.0 9.2 79 193-274 47-136 (312)
234 PRK06719 precorrin-2 dehydroge 96.1 0.19 4.1E-06 41.6 12.7 88 194-295 12-99 (157)
235 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.033 7.2E-07 49.6 8.9 78 194-273 4-91 (253)
236 PRK05866 short chain dehydroge 96.1 0.032 6.9E-07 51.4 8.8 79 194-274 39-127 (293)
237 PRK06500 short chain dehydroge 96.1 0.034 7.4E-07 49.5 8.9 79 194-274 5-90 (249)
238 TIGR01809 Shik-DH-AROM shikima 96.1 0.02 4.4E-07 52.3 7.3 75 194-274 124-200 (282)
239 PRK07502 cyclohexadienyl dehyd 96.1 0.063 1.4E-06 49.8 10.7 91 196-297 7-101 (307)
240 PRK07024 short chain dehydroge 96.1 0.039 8.5E-07 49.5 9.1 78 195-274 2-88 (257)
241 PRK00107 gidB 16S rRNA methylt 96.1 0.046 9.9E-07 46.7 8.9 96 192-295 43-144 (187)
242 PRK06196 oxidoreductase; Provi 96.1 0.042 9.1E-07 51.1 9.6 79 194-274 25-109 (315)
243 KOG0725 Reductases with broad 96.0 0.035 7.5E-07 50.4 8.6 80 194-274 7-99 (270)
244 PRK07062 short chain dehydroge 96.0 0.032 7E-07 50.3 8.4 79 194-274 7-97 (265)
245 PRK06198 short chain dehydroge 96.0 0.034 7.3E-07 50.0 8.5 80 194-274 5-94 (260)
246 PRK06483 dihydromonapterin red 96.0 0.054 1.2E-06 47.9 9.7 78 195-274 2-84 (236)
247 cd01075 NAD_bind_Leu_Phe_Val_D 96.0 0.075 1.6E-06 45.9 10.2 47 193-240 26-73 (200)
248 PRK11207 tellurite resistance 96.0 0.03 6.6E-07 48.3 7.7 98 188-296 24-134 (197)
249 PLN02366 spermidine synthase 96.0 0.073 1.6E-06 49.2 10.6 102 193-296 90-206 (308)
250 TIGR01318 gltD_gamma_fam gluta 96.0 0.035 7.6E-07 54.7 9.0 78 193-275 139-237 (467)
251 PRK07478 short chain dehydroge 96.0 0.041 8.9E-07 49.2 8.8 79 194-274 5-93 (254)
252 PRK07523 gluconate 5-dehydroge 96.0 0.035 7.6E-07 49.7 8.4 79 194-274 9-97 (255)
253 PRK14027 quinate/shikimate deh 96.0 0.064 1.4E-06 49.0 9.9 44 193-236 125-168 (283)
254 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.043 9.3E-07 48.5 8.8 79 194-274 4-92 (246)
255 PRK06194 hypothetical protein; 95.9 0.04 8.6E-07 50.3 8.7 79 194-274 5-93 (287)
256 PF00106 adh_short: short chai 95.9 0.023 4.9E-07 47.2 6.5 78 196-274 1-90 (167)
257 PRK06463 fabG 3-ketoacyl-(acyl 95.9 0.046 1E-06 49.0 8.9 79 194-274 6-89 (255)
258 PRK05876 short chain dehydroge 95.9 0.045 9.8E-07 49.8 8.9 79 194-274 5-93 (275)
259 PRK07890 short chain dehydroge 95.9 0.049 1.1E-06 48.8 9.0 79 194-274 4-92 (258)
260 PRK06079 enoyl-(acyl carrier p 95.9 0.037 8.1E-07 49.6 8.1 78 194-273 6-92 (252)
261 PRK12809 putative oxidoreducta 95.9 0.041 8.8E-07 56.5 9.3 75 194-274 309-405 (639)
262 PRK06505 enoyl-(acyl carrier p 95.9 0.045 9.8E-07 49.7 8.7 79 194-274 6-95 (271)
263 PRK06172 short chain dehydroge 95.9 0.046 1E-06 48.8 8.7 79 194-274 6-94 (253)
264 PRK12481 2-deoxy-D-gluconate 3 95.9 0.043 9.3E-07 49.2 8.4 79 194-274 7-93 (251)
265 PRK00258 aroE shikimate 5-dehy 95.8 0.028 6E-07 51.4 7.1 74 193-274 121-195 (278)
266 PRK07904 short chain dehydroge 95.8 0.069 1.5E-06 47.9 9.7 81 192-274 5-97 (253)
267 COG2264 PrmA Ribosomal protein 95.8 0.075 1.6E-06 48.5 9.7 130 157-299 129-266 (300)
268 PRK12823 benD 1,6-dihydroxycyc 95.8 0.039 8.5E-07 49.5 8.1 78 194-273 7-93 (260)
269 PRK08589 short chain dehydroge 95.8 0.047 1E-06 49.6 8.6 79 194-274 5-92 (272)
270 PRK08213 gluconate 5-dehydroge 95.8 0.054 1.2E-06 48.7 8.9 79 194-274 11-99 (259)
271 PRK13394 3-hydroxybutyrate deh 95.8 0.05 1.1E-06 48.8 8.8 79 194-274 6-94 (262)
272 PRK06701 short chain dehydroge 95.8 0.13 2.8E-06 47.2 11.5 80 193-274 44-134 (290)
273 PRK08703 short chain dehydroge 95.8 0.039 8.4E-07 48.9 7.9 80 194-274 5-97 (239)
274 PRK08267 short chain dehydroge 95.8 0.076 1.6E-06 47.7 9.8 77 196-274 2-87 (260)
275 COG0686 Ald Alanine dehydrogen 95.8 0.056 1.2E-06 49.0 8.5 98 195-299 168-271 (371)
276 PRK08317 hypothetical protein; 95.8 0.094 2E-06 46.3 10.3 101 187-296 12-124 (241)
277 PRK07454 short chain dehydroge 95.8 0.068 1.5E-06 47.4 9.4 79 194-274 5-93 (241)
278 TIGR03840 TMPT_Se_Te thiopurin 95.8 0.12 2.6E-06 45.2 10.5 102 192-297 32-153 (213)
279 PRK06138 short chain dehydroge 95.8 0.049 1.1E-06 48.5 8.4 79 194-274 4-91 (252)
280 PRK08862 short chain dehydroge 95.8 0.073 1.6E-06 47.0 9.4 78 194-273 4-92 (227)
281 PRK08643 acetoin reductase; Va 95.8 0.053 1.2E-06 48.5 8.7 78 195-274 2-89 (256)
282 PRK06482 short chain dehydroge 95.8 0.058 1.2E-06 49.0 8.9 77 196-274 3-86 (276)
283 PRK12367 short chain dehydroge 95.8 0.067 1.4E-06 47.9 9.1 73 194-274 13-89 (245)
284 PRK06179 short chain dehydroge 95.8 0.03 6.6E-07 50.6 7.1 76 195-274 4-83 (270)
285 PRK05854 short chain dehydroge 95.8 0.065 1.4E-06 49.8 9.4 79 194-274 13-103 (313)
286 KOG1201 Hydroxysteroid 17-beta 95.8 0.066 1.4E-06 48.4 8.8 80 193-274 36-124 (300)
287 PRK04457 spermidine synthase; 95.7 0.12 2.7E-06 46.7 10.8 94 193-294 65-175 (262)
288 PRK07063 short chain dehydroge 95.7 0.06 1.3E-06 48.4 8.9 79 194-274 6-96 (260)
289 PRK07533 enoyl-(acyl carrier p 95.7 0.061 1.3E-06 48.4 8.8 102 194-298 9-150 (258)
290 PRK09242 tropinone reductase; 95.7 0.061 1.3E-06 48.2 8.8 79 194-274 8-98 (257)
291 PRK09186 flagellin modificatio 95.7 0.067 1.5E-06 47.8 9.1 78 194-273 3-92 (256)
292 PLN02476 O-methyltransferase 95.7 0.096 2.1E-06 47.5 9.8 104 188-295 112-227 (278)
293 PRK07677 short chain dehydroge 95.7 0.061 1.3E-06 48.1 8.7 78 195-274 1-88 (252)
294 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.082 1.8E-06 45.4 9.1 76 194-276 27-109 (194)
295 PRK06181 short chain dehydroge 95.7 0.064 1.4E-06 48.2 8.9 78 195-274 1-88 (263)
296 PRK05884 short chain dehydroge 95.7 0.087 1.9E-06 46.3 9.5 74 197-273 2-78 (223)
297 COG2226 UbiE Methylase involve 95.7 0.17 3.6E-06 44.8 11.0 104 187-299 44-159 (238)
298 PRK07856 short chain dehydroge 95.7 0.049 1.1E-06 48.7 8.0 75 194-274 5-85 (252)
299 PRK07035 short chain dehydroge 95.7 0.064 1.4E-06 47.9 8.7 78 194-273 7-94 (252)
300 PRK12937 short chain dehydroge 95.7 0.2 4.2E-06 44.4 11.8 102 194-298 4-141 (245)
301 CHL00194 ycf39 Ycf39; Provisio 95.6 0.07 1.5E-06 49.7 9.2 95 197-298 2-111 (317)
302 PRK05717 oxidoreductase; Valid 95.6 0.07 1.5E-06 47.8 8.9 79 194-274 9-94 (255)
303 PRK06914 short chain dehydroge 95.6 0.07 1.5E-06 48.5 9.0 78 194-274 2-91 (280)
304 PRK06114 short chain dehydroge 95.6 0.067 1.4E-06 47.9 8.8 79 194-274 7-96 (254)
305 PRK07453 protochlorophyllide o 95.6 0.069 1.5E-06 49.8 9.1 78 194-273 5-92 (322)
306 PLN02253 xanthoxin dehydrogena 95.6 0.06 1.3E-06 49.0 8.5 79 194-274 17-104 (280)
307 COG0373 HemA Glutamyl-tRNA red 95.6 0.061 1.3E-06 51.3 8.6 96 193-298 176-276 (414)
308 PRK07985 oxidoreductase; Provi 95.6 0.16 3.4E-06 46.8 11.3 102 194-298 48-187 (294)
309 PRK08226 short chain dehydroge 95.6 0.072 1.6E-06 47.9 8.9 79 194-274 5-92 (263)
310 PRK06197 short chain dehydroge 95.6 0.075 1.6E-06 49.1 9.2 79 194-274 15-105 (306)
311 PRK07832 short chain dehydroge 95.6 0.076 1.6E-06 48.1 9.0 76 197-274 2-88 (272)
312 PF03446 NAD_binding_2: NAD bi 95.6 0.25 5.5E-06 41.1 11.4 88 196-297 2-95 (163)
313 PRK08993 2-deoxy-D-gluconate 3 95.6 0.074 1.6E-06 47.6 8.8 79 194-274 9-95 (253)
314 PLN02781 Probable caffeoyl-CoA 95.6 0.1 2.2E-06 46.4 9.4 104 188-295 62-177 (234)
315 TIGR02355 moeB molybdopterin s 95.6 0.096 2.1E-06 46.7 9.3 35 194-228 23-57 (240)
316 TIGR00507 aroE shikimate 5-deh 95.6 0.087 1.9E-06 47.9 9.2 92 192-296 114-214 (270)
317 PRK07074 short chain dehydroge 95.6 0.081 1.8E-06 47.4 9.0 78 195-274 2-87 (257)
318 PRK12429 3-hydroxybutyrate deh 95.5 0.063 1.4E-06 48.0 8.3 79 194-274 3-91 (258)
319 PRK12826 3-ketoacyl-(acyl-carr 95.5 0.069 1.5E-06 47.5 8.5 79 194-274 5-93 (251)
320 PRK06398 aldose dehydrogenase; 95.5 0.043 9.3E-07 49.4 7.1 74 194-274 5-82 (258)
321 PRK10538 malonic semialdehyde 95.5 0.08 1.7E-06 47.2 8.8 76 197-274 2-84 (248)
322 PRK06125 short chain dehydroge 95.5 0.066 1.4E-06 48.1 8.3 77 194-274 6-91 (259)
323 PRK05875 short chain dehydroge 95.5 0.08 1.7E-06 48.0 8.9 78 194-273 6-95 (276)
324 PRK08251 short chain dehydroge 95.5 0.086 1.9E-06 46.9 9.0 77 195-273 2-90 (248)
325 PRK12548 shikimate 5-dehydroge 95.5 0.086 1.9E-06 48.4 9.1 36 194-229 125-160 (289)
326 PRK07067 sorbitol dehydrogenas 95.5 0.083 1.8E-06 47.3 8.9 79 194-274 5-90 (257)
327 PRK07577 short chain dehydroge 95.5 0.062 1.3E-06 47.3 7.9 74 194-274 2-78 (234)
328 PRK08340 glucose-1-dehydrogena 95.5 0.083 1.8E-06 47.5 8.9 76 197-274 2-86 (259)
329 PRK13255 thiopurine S-methyltr 95.5 0.15 3.3E-06 44.7 10.2 101 191-296 34-155 (218)
330 PRK06124 gluconate 5-dehydroge 95.5 0.096 2.1E-06 46.9 9.2 79 194-274 10-98 (256)
331 PF01596 Methyltransf_3: O-met 95.5 0.052 1.1E-06 47.1 7.0 101 192-296 43-155 (205)
332 PRK08264 short chain dehydroge 95.5 0.062 1.3E-06 47.5 7.8 75 194-274 5-83 (238)
333 PRK08219 short chain dehydroge 95.5 0.15 3.4E-06 44.4 10.3 76 195-274 3-81 (227)
334 PRK08415 enoyl-(acyl carrier p 95.5 0.093 2E-06 47.8 9.1 102 194-298 4-145 (274)
335 PRK06720 hypothetical protein; 95.5 0.11 2.3E-06 43.7 8.7 79 194-274 15-103 (169)
336 PRK08263 short chain dehydroge 95.5 0.06 1.3E-06 48.9 7.8 78 195-274 3-87 (275)
337 PRK01683 trans-aconitate 2-met 95.4 0.18 3.9E-06 45.3 10.8 99 187-295 24-129 (258)
338 PRK12475 thiamine/molybdopteri 95.4 0.11 2.3E-06 48.9 9.4 36 194-229 23-58 (338)
339 PF00899 ThiF: ThiF family; I 95.4 0.068 1.5E-06 43.0 7.2 34 195-228 2-35 (135)
340 cd01483 E1_enzyme_family Super 95.4 0.14 3.1E-06 41.5 9.2 32 197-228 1-32 (143)
341 PRK08644 thiamine biosynthesis 95.4 0.12 2.6E-06 45.1 9.1 35 194-228 27-61 (212)
342 PF03435 Saccharop_dh: Sacchar 95.4 0.1 2.2E-06 50.0 9.6 90 198-294 1-96 (386)
343 PRK08085 gluconate 5-dehydroge 95.4 0.11 2.3E-06 46.6 9.1 79 194-274 8-96 (254)
344 COG3288 PntA NAD/NADP transhyd 95.4 0.16 3.4E-06 46.0 9.8 131 189-321 158-308 (356)
345 PRK15116 sulfur acceptor prote 95.4 0.22 4.7E-06 45.0 10.9 102 194-297 29-154 (268)
346 PRK05690 molybdopterin biosynt 95.4 0.14 3E-06 45.8 9.7 35 194-228 31-65 (245)
347 PF08704 GCD14: tRNA methyltra 95.4 0.034 7.4E-07 49.5 5.7 106 186-297 32-147 (247)
348 PRK08277 D-mannonate oxidoredu 95.4 0.092 2E-06 47.7 8.8 78 194-273 9-96 (278)
349 PF02254 TrkA_N: TrkA-N domain 95.4 0.23 5E-06 38.5 9.9 74 198-276 1-74 (116)
350 PRK07688 thiamine/molybdopteri 95.3 0.1 2.3E-06 48.9 9.2 35 194-228 23-57 (339)
351 PF02558 ApbA: Ketopantoate re 95.3 0.012 2.6E-07 48.3 2.5 95 198-297 1-102 (151)
352 PRK06101 short chain dehydroge 95.3 0.14 3.1E-06 45.3 9.8 75 196-273 2-80 (240)
353 PRK06484 short chain dehydroge 95.3 0.073 1.6E-06 53.2 8.6 79 194-274 4-89 (520)
354 PRK12384 sorbitol-6-phosphate 95.3 0.09 2E-06 47.1 8.5 78 195-274 2-91 (259)
355 COG0421 SpeE Spermidine syntha 95.3 0.23 5E-06 45.2 10.9 97 196-295 78-189 (282)
356 PRK12769 putative oxidoreducta 95.3 0.076 1.6E-06 54.7 8.8 76 193-274 325-422 (654)
357 PRK14192 bifunctional 5,10-met 95.3 0.12 2.5E-06 47.2 9.0 77 192-298 156-233 (283)
358 PRK06603 enoyl-(acyl carrier p 95.3 0.1 2.3E-06 47.0 8.8 78 194-273 7-95 (260)
359 PRK06077 fabG 3-ketoacyl-(acyl 95.3 0.26 5.6E-06 43.8 11.3 102 195-299 6-143 (252)
360 TIGR03206 benzo_BadH 2-hydroxy 95.3 0.1 2.3E-06 46.3 8.8 78 194-273 2-89 (250)
361 TIGR01963 PHB_DH 3-hydroxybuty 95.3 0.097 2.1E-06 46.7 8.6 78 195-274 1-88 (255)
362 PRK06935 2-deoxy-D-gluconate 3 95.3 0.1 2.2E-06 46.9 8.6 79 194-274 14-101 (258)
363 cd00755 YgdL_like Family of ac 95.3 0.21 4.6E-06 44.1 10.3 34 195-228 11-44 (231)
364 PRK08300 acetaldehyde dehydrog 95.3 0.58 1.3E-05 43.0 13.3 93 196-297 5-101 (302)
365 PRK07791 short chain dehydroge 95.2 0.12 2.6E-06 47.4 9.1 80 193-274 4-102 (286)
366 PRK12936 3-ketoacyl-(acyl-carr 95.2 0.12 2.5E-06 45.8 8.9 79 194-274 5-90 (245)
367 COG2910 Putative NADH-flavin r 95.2 0.12 2.5E-06 43.4 7.9 93 197-299 2-107 (211)
368 PRK07574 formate dehydrogenase 95.2 0.17 3.7E-06 48.2 10.2 45 194-239 191-235 (385)
369 PRK07666 fabG 3-ketoacyl-(acyl 95.2 0.11 2.5E-06 45.8 8.7 80 194-274 6-94 (239)
370 COG0031 CysK Cysteine synthase 95.2 0.28 6.2E-06 44.7 11.0 61 187-247 54-116 (300)
371 PRK08690 enoyl-(acyl carrier p 95.2 0.12 2.5E-06 46.7 8.8 79 194-274 5-94 (261)
372 PRK08303 short chain dehydroge 95.1 0.12 2.7E-06 47.8 8.9 34 194-228 7-41 (305)
373 cd01065 NAD_bind_Shikimate_DH 95.1 0.12 2.6E-06 42.4 8.0 74 193-275 17-92 (155)
374 PRK06523 short chain dehydroge 95.1 0.09 2E-06 47.2 7.8 75 194-273 8-86 (260)
375 COG0569 TrkA K+ transport syst 95.1 0.17 3.8E-06 44.5 9.3 84 197-286 2-87 (225)
376 PRK14191 bifunctional 5,10-met 95.1 0.17 3.6E-06 46.0 9.2 95 173-298 135-231 (285)
377 COG2230 Cfa Cyclopropane fatty 95.1 0.1 2.2E-06 47.1 7.8 106 182-300 60-180 (283)
378 PRK12747 short chain dehydroge 95.1 0.47 1E-05 42.3 12.4 104 194-299 3-147 (252)
379 PRK14103 trans-aconitate 2-met 95.1 0.31 6.8E-06 43.8 11.2 97 186-295 21-125 (255)
380 TIGR02354 thiF_fam2 thiamine b 95.1 0.095 2.1E-06 45.3 7.4 35 194-228 20-54 (200)
381 PRK07984 enoyl-(acyl carrier p 95.0 0.12 2.7E-06 46.6 8.5 78 194-273 5-93 (262)
382 cd00757 ThiF_MoeB_HesA_family 95.0 0.21 4.5E-06 44.1 9.7 34 195-228 21-54 (228)
383 PRK08159 enoyl-(acyl carrier p 95.0 0.17 3.6E-06 46.0 9.3 80 192-273 7-97 (272)
384 PRK08278 short chain dehydroge 95.0 0.12 2.5E-06 47.0 8.2 79 194-274 5-100 (273)
385 PLN03139 formate dehydrogenase 95.0 0.21 4.5E-06 47.7 10.0 46 194-240 198-243 (386)
386 TIGR00477 tehB tellurite resis 94.9 0.12 2.5E-06 44.5 7.6 99 187-296 23-133 (195)
387 PRK08945 putative oxoacyl-(acy 94.9 0.13 2.8E-06 45.8 8.2 82 192-274 9-102 (247)
388 PRK00536 speE spermidine synth 94.9 0.089 1.9E-06 47.3 7.0 97 195-297 73-172 (262)
389 PRK08328 hypothetical protein; 94.9 0.13 2.9E-06 45.5 8.1 35 194-228 26-60 (231)
390 PRK00312 pcm protein-L-isoaspa 94.9 0.091 2E-06 45.8 7.0 97 187-295 71-174 (212)
391 PRK05650 short chain dehydroge 94.9 0.14 3E-06 46.3 8.5 76 197-274 2-87 (270)
392 PRK06940 short chain dehydroge 94.9 0.17 3.6E-06 46.0 9.0 99 195-297 2-126 (275)
393 PRK12743 oxidoreductase; Provi 94.9 0.15 3.3E-06 45.6 8.6 78 195-274 2-90 (256)
394 PRK07097 gluconate 5-dehydroge 94.9 0.17 3.8E-06 45.5 9.0 79 194-274 9-97 (265)
395 PRK06113 7-alpha-hydroxysteroi 94.8 0.16 3.5E-06 45.4 8.7 79 194-274 10-98 (255)
396 COG0334 GdhA Glutamate dehydro 94.8 0.12 2.5E-06 49.0 7.7 37 193-230 205-241 (411)
397 PRK08762 molybdopterin biosynt 94.8 0.14 3.1E-06 48.9 8.6 35 194-228 134-168 (376)
398 PRK13243 glyoxylate reductase; 94.8 0.23 5E-06 46.6 9.8 37 194-231 149-185 (333)
399 PLN02589 caffeoyl-CoA O-methyl 94.8 0.28 6.1E-06 43.8 9.9 100 191-294 76-188 (247)
400 PLN02657 3,8-divinyl protochlo 94.8 0.29 6.3E-06 47.0 10.7 82 190-274 55-146 (390)
401 PRK07417 arogenate dehydrogena 94.8 0.28 6E-06 44.8 10.1 87 197-296 2-91 (279)
402 KOG1207 Diacetyl reductase/L-x 94.8 0.12 2.6E-06 42.8 6.7 46 194-240 6-52 (245)
403 PRK12550 shikimate 5-dehydroge 94.8 0.11 2.3E-06 47.3 7.2 70 191-274 118-188 (272)
404 PRK07102 short chain dehydroge 94.8 0.26 5.7E-06 43.7 9.8 76 196-274 2-86 (243)
405 cd01487 E1_ThiF_like E1_ThiF_l 94.8 0.18 3.9E-06 42.5 8.1 33 197-229 1-33 (174)
406 cd01492 Aos1_SUMO Ubiquitin ac 94.7 0.24 5.1E-06 42.7 9.0 94 194-291 20-136 (197)
407 TIGR00417 speE spermidine synt 94.7 0.28 6E-06 44.6 10.0 100 194-296 72-186 (270)
408 PRK08063 enoyl-(acyl carrier p 94.7 0.18 3.8E-06 44.9 8.6 79 194-274 3-92 (250)
409 PRK08618 ornithine cyclodeamin 94.7 0.32 7E-06 45.4 10.5 94 193-299 125-224 (325)
410 PLN02244 tocopherol O-methyltr 94.7 0.096 2.1E-06 49.3 7.0 95 193-297 117-224 (340)
411 PRK06171 sorbitol-6-phosphate 94.7 0.11 2.3E-06 46.9 7.1 76 194-274 8-87 (266)
412 PRK10669 putative cation:proto 94.7 0.22 4.7E-06 50.4 9.9 76 196-276 418-493 (558)
413 PRK12938 acetyacetyl-CoA reduc 94.7 0.12 2.7E-06 45.8 7.5 79 194-274 2-91 (246)
414 PRK07370 enoyl-(acyl carrier p 94.6 0.15 3.3E-06 45.8 8.0 102 194-298 5-149 (258)
415 KOG1252 Cystathionine beta-syn 94.6 0.23 4.9E-06 45.6 8.7 57 187-244 95-155 (362)
416 PRK05557 fabG 3-ketoacyl-(acyl 94.6 0.21 4.5E-06 44.2 8.8 79 194-274 4-93 (248)
417 PLN00141 Tic62-NAD(P)-related 94.6 0.2 4.4E-06 44.8 8.7 100 194-298 16-133 (251)
418 PLN00203 glutamyl-tRNA reducta 94.6 0.14 3.1E-06 50.8 8.1 72 195-275 266-340 (519)
419 PRK15469 ghrA bifunctional gly 94.6 0.28 6.1E-06 45.5 9.6 36 194-230 135-170 (312)
420 PRK07424 bifunctional sterol d 94.5 0.22 4.7E-06 48.0 9.1 74 194-274 177-255 (406)
421 PRK14188 bifunctional 5,10-met 94.5 0.26 5.7E-06 45.1 9.1 94 173-298 136-232 (296)
422 PRK09135 pteridine reductase; 94.5 0.24 5.2E-06 43.9 9.0 78 194-273 5-94 (249)
423 TIGR02622 CDP_4_6_dhtase CDP-g 94.5 0.092 2E-06 49.6 6.5 75 194-274 3-85 (349)
424 PRK05597 molybdopterin biosynt 94.5 0.24 5.1E-06 46.9 9.2 36 194-229 27-62 (355)
425 PRK07792 fabG 3-ketoacyl-(acyl 94.5 0.29 6.3E-06 45.3 9.7 79 194-274 11-99 (306)
426 TIGR02415 23BDH acetoin reduct 94.5 0.2 4.4E-06 44.6 8.4 77 196-274 1-87 (254)
427 PRK12746 short chain dehydroge 94.5 0.56 1.2E-05 41.8 11.3 79 194-274 5-100 (254)
428 PRK08594 enoyl-(acyl carrier p 94.5 0.19 4.1E-06 45.2 8.2 78 194-273 6-96 (257)
429 PF03807 F420_oxidored: NADP o 94.4 1.4 3E-05 32.7 11.7 85 197-295 1-93 (96)
430 KOG4022 Dihydropteridine reduc 94.4 0.5 1.1E-05 38.7 9.4 97 195-298 3-131 (236)
431 PRK01581 speE spermidine synth 94.4 0.74 1.6E-05 43.3 12.0 102 193-297 149-269 (374)
432 PRK05565 fabG 3-ketoacyl-(acyl 94.4 0.24 5.2E-06 43.8 8.6 78 195-274 5-93 (247)
433 PRK08287 cobalt-precorrin-6Y C 94.4 0.55 1.2E-05 39.9 10.5 98 187-295 24-130 (187)
434 PF13823 ADH_N_assoc: Alcohol 94.4 0.05 1.1E-06 28.9 2.4 22 10-32 1-22 (23)
435 COG2227 UbiG 2-polyprenyl-3-me 94.4 0.45 9.7E-06 41.8 9.7 95 193-295 58-160 (243)
436 PRK03562 glutathione-regulated 94.4 0.27 5.8E-06 50.3 9.8 77 195-276 400-476 (621)
437 PTZ00098 phosphoethanolamine N 94.3 0.37 8.1E-06 43.6 9.7 103 186-297 44-157 (263)
438 TIGR00563 rsmB ribosomal RNA s 94.3 0.32 7E-06 47.3 9.9 103 188-297 232-369 (426)
439 PLN02520 bifunctional 3-dehydr 94.3 0.17 3.7E-06 50.6 8.0 71 194-274 378-449 (529)
440 PRK14194 bifunctional 5,10-met 94.3 0.31 6.7E-06 44.6 9.0 95 173-298 137-233 (301)
441 PLN02823 spermine synthase 94.3 0.44 9.5E-06 44.6 10.2 99 194-295 103-219 (336)
442 PRK08416 7-alpha-hydroxysteroi 94.2 0.28 6E-06 44.1 8.8 78 194-273 7-96 (260)
443 PLN03075 nicotianamine synthas 94.2 0.23 5E-06 45.4 8.1 97 194-295 123-232 (296)
444 PRK10258 biotin biosynthesis p 94.2 0.4 8.7E-06 42.9 9.6 99 188-297 36-141 (251)
445 PLN02986 cinnamyl-alcohol dehy 94.2 0.29 6.3E-06 45.5 9.0 37 194-231 4-41 (322)
446 PRK05562 precorrin-2 dehydroge 94.2 1.9 4.2E-05 37.7 13.4 93 194-297 24-117 (223)
447 TIGR02632 RhaD_aldol-ADH rhamn 94.1 0.23 4.9E-06 51.4 8.9 79 194-274 413-503 (676)
448 PRK07775 short chain dehydroge 94.1 0.5 1.1E-05 42.8 10.3 79 194-274 9-97 (274)
449 PRK12745 3-ketoacyl-(acyl-carr 94.1 0.26 5.7E-06 43.9 8.3 77 196-274 3-90 (256)
450 PRK07411 hypothetical protein; 94.1 0.3 6.6E-06 46.8 9.1 35 194-228 37-71 (390)
451 PRK08220 2,3-dihydroxybenzoate 94.1 0.23 4.9E-06 44.3 7.8 74 194-274 7-86 (252)
452 PF10727 Rossmann-like: Rossma 94.0 0.23 5E-06 39.4 6.8 79 195-287 10-90 (127)
453 PRK08223 hypothetical protein; 94.0 0.27 5.9E-06 44.7 8.1 35 194-228 26-60 (287)
454 PRK08936 glucose-1-dehydrogena 94.0 0.33 7.1E-06 43.6 8.8 79 194-274 6-95 (261)
455 COG1179 Dinucleotide-utilizing 94.0 0.68 1.5E-05 40.6 10.1 34 194-227 29-62 (263)
456 PRK04266 fibrillarin; Provisio 94.0 0.91 2E-05 40.0 11.2 102 188-295 66-175 (226)
457 PRK07889 enoyl-(acyl carrier p 94.0 0.26 5.6E-06 44.3 8.1 79 194-274 6-95 (256)
458 PRK05600 thiamine biosynthesis 94.0 0.37 8.1E-06 45.8 9.4 35 194-228 40-74 (370)
459 PRK05708 2-dehydropantoate 2-r 94.0 0.34 7.4E-06 44.9 9.0 97 196-296 3-104 (305)
460 PF08659 KR: KR domain; Inter 94.0 0.3 6.5E-06 41.4 8.0 77 197-274 2-91 (181)
461 TIGR01505 tartro_sem_red 2-hyd 94.0 0.54 1.2E-05 43.2 10.3 43 197-240 1-43 (291)
462 PRK03659 glutathione-regulated 94.0 0.36 7.7E-06 49.2 9.8 93 196-294 401-496 (601)
463 PRK06522 2-dehydropantoate 2-r 94.0 0.72 1.6E-05 42.4 11.2 92 197-295 2-99 (304)
464 PRK14189 bifunctional 5,10-met 94.0 0.37 8E-06 43.8 8.8 94 174-298 137-232 (285)
465 PRK05855 short chain dehydroge 93.9 0.25 5.4E-06 49.9 8.7 79 194-274 314-402 (582)
466 PRK12825 fabG 3-ketoacyl-(acyl 93.9 0.34 7.3E-06 42.8 8.7 78 194-273 5-93 (249)
467 TIGR01532 E4PD_g-proteo D-eryt 93.9 0.54 1.2E-05 43.8 10.1 101 197-299 1-123 (325)
468 COG1648 CysG Siroheme synthase 93.9 1.8 4E-05 37.6 12.8 95 194-299 11-106 (210)
469 PLN02233 ubiquinone biosynthes 93.9 0.58 1.3E-05 42.3 10.1 101 188-297 67-183 (261)
470 PRK06997 enoyl-(acyl carrier p 93.9 0.35 7.7E-06 43.5 8.8 79 194-274 5-94 (260)
471 PRK01438 murD UDP-N-acetylmura 93.8 0.4 8.6E-06 47.5 9.6 69 194-274 15-88 (480)
472 TIGR00452 methyltransferase, p 93.8 0.83 1.8E-05 42.4 11.0 101 183-295 110-224 (314)
473 PRK11036 putative S-adenosyl-L 93.8 0.78 1.7E-05 41.2 10.7 93 193-295 43-148 (255)
474 cd05211 NAD_bind_Glu_Leu_Phe_V 93.8 0.22 4.8E-06 43.6 6.8 47 193-239 21-77 (217)
475 TIGR01289 LPOR light-dependent 93.7 0.42 9.1E-06 44.4 9.2 78 195-274 3-91 (314)
476 PRK13656 trans-2-enoyl-CoA red 93.7 0.34 7.3E-06 46.0 8.3 79 193-275 39-142 (398)
477 PLN02928 oxidoreductase family 93.7 0.5 1.1E-05 44.6 9.6 36 193-229 157-192 (347)
478 PRK09134 short chain dehydroge 93.7 0.4 8.6E-06 43.0 8.7 79 194-274 8-97 (258)
479 PRK11559 garR tartronate semia 93.7 0.76 1.6E-05 42.3 10.7 43 197-240 4-46 (296)
480 PLN02490 MPBQ/MSBQ methyltrans 93.7 0.5 1.1E-05 44.3 9.4 99 193-297 112-216 (340)
481 PRK00121 trmB tRNA (guanine-N( 93.7 1.2 2.6E-05 38.4 11.3 96 194-295 40-155 (202)
482 TIGR03215 ac_ald_DH_ac acetald 93.6 0.63 1.4E-05 42.5 9.8 89 197-297 3-95 (285)
483 TIGR01829 AcAcCoA_reduct aceto 93.6 0.42 9E-06 42.1 8.7 77 196-274 1-88 (242)
484 PF05368 NmrA: NmrA-like famil 93.6 0.42 9.2E-06 42.1 8.7 70 198-273 1-73 (233)
485 PLN00016 RNA-binding protein; 93.6 0.65 1.4E-05 44.4 10.5 95 195-297 52-165 (378)
486 PRK00216 ubiE ubiquinone/menaq 93.6 0.68 1.5E-05 40.8 10.0 101 188-297 45-159 (239)
487 PRK10792 bifunctional 5,10-met 93.6 0.46 9.9E-06 43.2 8.8 94 174-298 138-233 (285)
488 PF02670 DXP_reductoisom: 1-de 93.6 0.88 1.9E-05 36.1 9.3 86 198-287 1-113 (129)
489 TIGR00138 gidB 16S rRNA methyl 93.6 0.58 1.3E-05 39.7 9.0 92 194-295 42-141 (181)
490 PRK06849 hypothetical protein; 93.5 0.64 1.4E-05 44.6 10.3 92 194-287 3-99 (389)
491 PLN02686 cinnamoyl-CoA reducta 93.5 0.47 1E-05 45.2 9.2 44 193-237 51-95 (367)
492 PF13659 Methyltransf_26: Meth 93.5 0.57 1.2E-05 36.1 8.3 93 195-295 1-114 (117)
493 PRK14982 acyl-ACP reductase; P 93.5 0.34 7.3E-06 45.3 7.9 93 193-298 153-248 (340)
494 PRK14618 NAD(P)H-dependent gly 93.4 0.72 1.6E-05 43.1 10.3 94 196-297 5-105 (328)
495 PRK06947 glucose-1-dehydrogena 93.4 0.38 8.2E-06 42.7 8.1 77 196-274 3-90 (248)
496 PRK09496 trkA potassium transp 93.4 0.57 1.2E-05 45.9 10.0 78 193-274 229-307 (453)
497 PRK12480 D-lactate dehydrogena 93.4 0.91 2E-05 42.5 10.8 37 194-231 145-181 (330)
498 PRK08642 fabG 3-ketoacyl-(acyl 93.4 0.46 1E-05 42.2 8.6 78 194-273 4-90 (253)
499 PRK14106 murD UDP-N-acetylmura 93.4 0.4 8.7E-06 47.0 8.8 70 194-274 4-78 (450)
500 PRK07878 molybdopterin biosynt 93.3 0.47 1E-05 45.6 9.0 35 194-228 41-75 (392)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-69 Score=467.66 Aligned_cols=374 Identities=74% Similarity=1.264 Sum_probs=361.7
Q ss_pred CCccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016978 4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
..++.++||++.+++++||.++|++.++|+.+||+||+.++++|++|...++|..+...+|.++|||.+|+|+++|..|+
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 45678999999999999999999999999999999999999999999999999987789999999999999999999999
Q ss_pred CcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEec
Q 016978 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i 163 (379)
++++||+|+......|+.|.+|+++..|+|...+....-+...+||+++|.-+|+.+||+++.-+|+||.+++...+++|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 99999999999999999999999999999999999888888878999999999999999999999999999999999999
Q ss_pred CCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 016978 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
+++.+++.++++.|.++|+|.|.++.++++||++|.|.|.|++|++++|-|++.|+.++|++|-+++|.+.++++|++++
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~ 241 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEF 241 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecC
Q 016978 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG 323 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~ 323 (379)
+|+.+.....++.+++.|++|+|+-|||+|+.+++++++.+..++||+-|.+|....+..+++.++.++.++++.|+.++
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG 321 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG 321 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence 99986555799999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
.++.+.+++.+++...++++.+.++|++++||+++++||+.|.+++..|.||.+
T Consensus 322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999998864
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=5.8e-69 Score=475.21 Aligned_cols=366 Identities=62% Similarity=1.074 Sum_probs=352.6
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
+++||++.+++++|++++|+++++|.+|||+||+.|+|+||+|..+++|..|.. +|.++|||++|+|++||+.|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 457999999999999999999999999999999999999999999999999888 9999999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|+......|+.|.+|+++++|+|.......+-|.. .+|+++++.+|.+.+|+++.++|++|..+++..++|++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999999988888866 99999999999999999999999999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+++.++++.|..+|.+.++++.+++++|++|.|.|.|++|++++|-|+..|+.+||+++.+++|+++++++|+++++|..
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcc
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+. .+.++.+.++|++|+|++|||+|+...+++++.++.+ +|+.+.+|.......++++++.++.+++|+|++++....
T Consensus 239 ~~-~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 EV-DDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred hh-hhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 72 2699999999999999999999999999999999999 599999999888888999999999999999999999888
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
+.++++++++..+|++++.+++++.++|+|||+||+.+.+++..|.||++
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 89999999999999999999999999999999999999999999888865
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8.4e-67 Score=472.14 Aligned_cols=335 Identities=34% Similarity=0.516 Sum_probs=305.4
Q ss_pred cccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
+++|||+++.++++|+++.|++.|+|+++||+|+|.|+|+|++|++.++|.++...+|.+||||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEee-cCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC
Q 016978 87 PGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 87 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
+||||.+ +...+|+.|.||+++++++|++... +|++ .+| +|+||+++|+.++++||+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TDG------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---ccee-ecC------------------cceeEEEEchHHeEECCC
Confidence 9999998 8999999999999999999999664 4555 555 999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++||.+.|+..|+|++| ++.+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999996 56899999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCC
Q 016978 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 324 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 324 (379)
..+ .+..+.+++. +|+++|+++ +.+++.+++.|+++ |+++++|.........++.+.++ +++++.|+..++
T Consensus 217 ~~~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 217 SSD--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred cCC--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 775 6777777664 999999999 79999999999997 99999999742233445555444 499999998875
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
+.+.++++++..++++++. +.+.++++|+++||+.|.+++.. |+||.+.
T Consensus 289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 4799999999999999965 44799999999999999999987 9999875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.2e-61 Score=420.05 Aligned_cols=342 Identities=27% Similarity=0.411 Sum_probs=300.6
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCC---CCCcccccceeEEEEEeCCCCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~---~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
.+|+|+++.++++ +.+.++|.|++ .|+||+|++.++|||++|++++....... +.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4789999999999 99999999987 99999999999999999999998765333 6899999999999999999999
Q ss_pred CcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEec
Q 016978 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i 163 (379)
++++||||++.|..+|..|++|++|.+|+|.+..+. +..+.+| ++++|++.++++|+|+
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeC
Confidence 999999999999999999999999999999998863 3334566 9999999999999999
Q ss_pred CCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 016978 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
||++|++++|++. +++++||| .+++++++|++|||+|||++|+.+...|+++|+.+|++++..++|+++++++|++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999999987 69999998 488999999999999999999999999999999999999999999999999999987
Q ss_pred eCCCCCC--chHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEe
Q 016978 244 VNPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKG 319 (379)
Q Consensus 244 ~~~~~~~--~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~ 319 (379)
.+..... ..+.+.+...... .+|+.|||+|....++.++..++.+ |++++.|+... ..+++..... +++.++|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~--~~~fpi~~v~~kE~~~~g 295 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAE--EIQFPIIDVALKEVDLRG 295 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCC--ccccChhhhhhheeeeee
Confidence 7665422 3444555555443 6999999999999999999999996 99999988543 5555555443 3888888
Q ss_pred eecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEecCC
Q 016978 320 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQD 379 (379)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~--~Kvvi~~~~ 379 (379)
++-+. ..+++..++++++|++.+.++|++.|+++++.+||+.++.++. .|++|..++
T Consensus 296 ~fry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 296 SFRYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 76442 2489999999999999999999999999999999999998884 499998764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-59 Score=411.44 Aligned_cols=349 Identities=30% Similarity=0.463 Sum_probs=309.5
Q ss_pred CCCCCccccceeeeeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEe
Q 016978 1 MSTEGQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78 (379)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~v 78 (379)
|+++..|.+.+++.+..+++ ++++.+++.|+++++||+|+|+|+|||++|++.+.|+++..++|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 77888899999999999999 5777999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCEE-eecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecC
Q 016978 79 GEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 79 G~~v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 157 (379)
|++|++|++|||| +-+...+|..|.+|+++++++|++... .+.|+. .|| ..++|+|++|+++++
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~~-~DG-------------t~~~ggf~~~~~v~~ 145 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGVY-HDG-------------TITQGGFQEYAVVDE 145 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeE-eccccc-cCC-------------CCccCccceeEEEee
Confidence 9999999999999 455678999999999999999996332 234555 666 455679999999999
Q ss_pred cceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHH
Q 016978 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK 236 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~ 236 (379)
.++++||++++.+.||.+.|+..|.|.+| ...++.||++|-|.|+|++|.+++|+|++||. +|+++++++ +|.+.++
T Consensus 146 ~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 146 VFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIK 223 (360)
T ss_pred eeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHH
Confidence 99999999999999999999999999985 66788999999999997799999999999999 999999987 6777888
Q ss_pred hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-cc
Q 016978 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GR 315 (379)
Q Consensus 237 ~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~ 315 (379)
.||++.+++..+ +.++.+.+.+.+++++|.|.+. ....+..++.+++.+ |++|++|.+.. ++.++.+++.. .+
T Consensus 224 ~LGAd~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~ 297 (360)
T KOG0023|consen 224 SLGADVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRK 297 (360)
T ss_pred hcCcceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccE
Confidence 899999988873 3899999999988888888876 345689999999996 99999999754 66666666555 88
Q ss_pred EEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 316 VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 316 ~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
+|.|+..++. .+.++++++..++.+... .+..+++++++||+++++++.. |.||.++
T Consensus 298 ~I~GS~vG~~---ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 298 SIKGSIVGSR---KETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred EEEeeccccH---HHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 8999988854 689999999999999865 5888999999999999999987 9999864
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2e-56 Score=427.11 Aligned_cols=374 Identities=54% Similarity=1.032 Sum_probs=310.0
Q ss_pred CCccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCC
Q 016978 4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v 82 (379)
+++|++|||+++.++++++.++++|.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++
T Consensus 5 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence 346789999999999988999999999999999999999999999999999887542 3578999999999999999999
Q ss_pred CCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCcccccc--CCCcccccCCcceeeeeEEecCcce
Q 016978 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSV 160 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~g~~~~~~~v~~~~~ 160 (379)
+++++||||++.+..+|+.|.+|.+++++.|.+....+..+..+.+|...+.. .+....+....|+|+||+.+|.+.+
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 99999999999999999999999999999999865321100000011000000 0111122233579999999999999
Q ss_pred EecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+++|+++++++++.+++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 99999999999999999999999988888899999999999999999999999999999679999999999999999999
Q ss_pred ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEee
Q 016978 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGT 320 (379)
Q Consensus 241 ~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~ 320 (379)
++++++++.+.++.+.+++.+.+++|++||++|.+..+..++.++++++|+++.+|.......+++.+..+++++++.|+
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 324 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS 324 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEE
Confidence 99998765223577888887766899999999998889999999988339999999865433344444434457888888
Q ss_pred ecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 321 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
..+.+....+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 776554446789999999999999888899999999999999999988877999874
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3.7e-56 Score=423.25 Aligned_cols=367 Identities=66% Similarity=1.154 Sum_probs=305.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++...+++++++++|.|+|.++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|++++++++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 89999999888899999999999999999999999999999999988766556799999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
||++.+..+|+.|.+|..+++++|.+.....++|.. .+|...+...|...++..+.|+|+||+.+|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999999999999999999999999976533233332 2221111111222122223479999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|+++++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998888899999999999999999999999999999779999999999999999999999987643
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcccc
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRS 329 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 329 (379)
..++.+.+++.+++++|++|||+|++..+..+++++++++|+++.+|.......+++.+..++.+..+.++.++......
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 35577778888777899999999987889999999988339999999864333344444444444456666554433446
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 330 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 330 ~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 789999999999999888899999999999999999888777999975
No 8
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.5e-55 Score=419.37 Aligned_cols=367 Identities=78% Similarity=1.284 Sum_probs=308.4
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
+|||+++.+.+++++++++|.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999998876655789999999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|++++++.|.+.....+.|.. .+|...+.-+|...+++.+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999876432222222 222111112233334444567999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++++++++++.+||+++++.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998888889999999999999999999999999999967999999999999999999999998875
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCccc
Q 016978 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 328 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (379)
.+.++.+.+++.+++++|+|||++|++..+..+++++++++|+++.+|.......+++.+..+..+..+.++..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 32368888888887799999999998778999999998834999999976432233444444444556667666655556
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
.+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 789999999999999988889999999999999999998877799985
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.5e-55 Score=418.20 Aligned_cols=369 Identities=65% Similarity=1.165 Sum_probs=311.5
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
++|||+++.+++++++++++|.|+|+++||+||+.+++||++|++.+.|..+...+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 37999999998888999999999999999999999999999999999887665577999999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||||++.+..+|+.|.+|..++++.|.........|....++...+...|...+++.+.|+|+||+.++.+.++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999999999999999999999999986532222221111111122223333444456799999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++++++.+.+||+++++..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999989999999888888999999999999999999999999999987799999999999999999999999876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcc
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+.+.++.+.+++.+++++|++||++|....+..++.++++++|+++.+|.......+++.+..+++++++.+++.+.+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 53245777788877668999999999888899999999992299999998654334555554445688898887766655
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
+.+++++++++.++++++.++++++|||+|+++|++.+.+++..|++|.
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 5678999999999999988888999999999999999999988899874
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.5e-55 Score=415.96 Aligned_cols=360 Identities=41% Similarity=0.714 Sum_probs=301.4
Q ss_pred ceeeeeecCCC--------CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 016978 10 CKAAVAWEPNK--------PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (379)
Q Consensus 10 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 81 (379)
|||+++.++|. .++++++|.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 79999998763 389999999999999999999999999999999988754 346899999999999999999
Q ss_pred CCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceE
Q 016978 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (379)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~ 161 (379)
++++++||||++.+...|+.|.+|+.++++.|.........|.. .+|.-.+..++-...+..+.|+|+||+.+|++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876543222221 11100000111111112234699999999999999
Q ss_pred ecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 016978 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (379)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~ 241 (379)
++|+++++++|+++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999989999999888888999999999999999999999999999996799999999999999999999
Q ss_pred eEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEee
Q 016978 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT 320 (379)
Q Consensus 242 ~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~ 320 (379)
+++++.+ .++.+.+++.+++++|++|||+|....+..++++++++ |+++.+|........+++...++. ++++.++
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 9998876 67888888887778999999999888899999999996 999999975432334555544443 8889988
Q ss_pred ecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEE
Q 016978 321 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCV 374 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvv 374 (379)
+.+.+....+++++++++.++++++.++++++|+|+|+++||+.+.+++.. |+|
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 776554456789999999999999888899999999999999999999887 544
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.6e-54 Score=408.52 Aligned_cols=356 Identities=37% Similarity=0.625 Sum_probs=300.7
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
+|||+++.+++++++++++|.|+|++++|+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 699999999998899999999999999999999999999999999888653 2478899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|.+++.++|....... ......+ |.......+.|+|+||+.+|++.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~-~~~~~~~--------g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNAT-QKMTLTD--------GTELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccc-ccccccc--------CcccccccccccccceEEEehhheEECCCCCC
Confidence 99999999999999999999999998532110 0000000 10000011246999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++|+++++.+.++|+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++++
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988888888999999999999999999999999999966999999999999999999999998876
Q ss_pred CCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCc
Q 016978 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 326 (379)
.++.+.+++.+++ ++|++|||+|++..+..++.+++++ |+++.+|........++++..++. +.++.+++.+...
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 6788888888887 8999999999878899999999996 999999986433334455434333 7788877654333
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
...++++++++++++++++.++++++||++|+++|++.+++++..|++|.+
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 456788999999999999888899999999999999999988877888763
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.8e-54 Score=407.84 Aligned_cols=365 Identities=54% Similarity=1.020 Sum_probs=299.7
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
..|||+++.++++.++++++|.|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|++++++++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 679999999988779999999999999999999999999999999887642 35789999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+..+|+.|.+|+++++++|.+.... ..|....++...+...|....++...|+|+||+.+|++.++++|+++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 99999999999999999999999999874210 00100000000000011111111124799999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++++.++|+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++++++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~ 246 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence 99999999888889998877778899999999999999999999999999996688898899999999999999999876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc--ceeeeccEEEeeecCCC
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP--FQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~ 325 (379)
+.+.++.+.+++.+.+++|++||++|....+..+++.+++++|+++.+|..... ..+.. ..+.+++++.|+..+.+
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFGGW 324 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecCCC
Confidence 522467778888876689999999999777999999999933999999986432 22222 22345888888877655
Q ss_pred cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEecC
Q 016978 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 378 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~~ 378 (379)
....++.+++++++++++++.++++++|+|+|+++|++.+.+++..|+||++.
T Consensus 325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 44567899999999999998778999999999999999999988789999875
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3e-53 Score=403.14 Aligned_cols=365 Identities=62% Similarity=1.099 Sum_probs=305.9
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
+.|||+++.+.+++++++++|.|++.++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 3589999998888899999999999999999999999999999999988654 457899999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+..+|+.|.+|..+.+++|++.... ..|.. .++...+..+|...+++.+.|+|+||+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999999999999999999999999986532 11211 11111111223333334456799999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999887888999999999999999999999999999997799999999999999999999999876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcc
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+.+.++.+.+++.+.+++|++|||+|+...+..+++++++++|+++.+|.... ...++++..++.++++.+++.+.+..
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~ 316 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKS 316 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCCh
Confidence 53345677777777678999999999878889999999873399999998542 23344444444478888887766554
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
..++++++++++++.+++.++++++|+++|+++|++.+.+++..|++|.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 5678999999999999988889999999999999999998886699874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.3e-52 Score=395.22 Aligned_cols=337 Identities=28% Similarity=0.438 Sum_probs=290.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.+.... ...|.++|||++|+|+++|++++.+++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998776 999999999999999999999999999999988776432 2357899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|+.++++.|.+... .+|.. .+ |+|+||+.+|.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987542 23322 33 4999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++|+++++++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999986 5678899999999999999999999999999954999999999999999999999998876
Q ss_pred CCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcc
Q 016978 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
.+ .+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.+++...
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 45 6677777777 8999999999987778999999996 99999997542 22222112223478888876543
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
..+++++++++.++++.+.++++++|+++|+++|++.+.+++..|+||+|
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35789999999999999888899999999999999999887756999975
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-51 Score=386.06 Aligned_cols=336 Identities=20% Similarity=0.296 Sum_probs=277.5
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecccccccccc-CCCC--CCCCCcccccceeEEEEEeCCCCCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
..+|+++++++++ ++++++|.| +.++||||||.++|||++|++.+. |..+ ..++|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4689999999988 999999987 589999999999999999999875 3332 2357999999999999999 7889
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
+++||||++.+..+|+.|++|++++++.|.+... +|....+ ....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999997553 2321000 0012599999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++++++.. .++++||+++. .....+|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++
T Consensus 142 ~~l~~~~aa~~-~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAFA-EPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHhh-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99998776644 47789999864 45667899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecC
Q 016978 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 323 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 323 (379)
++++ .++.+..+ . .+++|++|||+|++..+..++++++++ |+++.+|.... ..++++..++ +++++.++...
T Consensus 220 ~~~~--~~~~~~~~-~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 220 NPQN--DDLDHYKA-E-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred cCCc--ccHHHHhc-c-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec
Confidence 8876 44443322 1 236999999999977899999999996 99999997543 2334444333 37788776532
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
..++++++++++++++++.++++++|+++|+++|++.+.+++.. |++|.+
T Consensus 293 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 35799999999999999888899999999999999999888765 999874
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=5.5e-51 Score=383.03 Aligned_cols=341 Identities=28% Similarity=0.383 Sum_probs=280.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCc-ccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|+++++..++....+.+.+.|.+.++||+|||.++|||++|++.+++..+..+.|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 67777777776344777777778899999999999999999999999877776666 99999999999999 77889999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccc--cceecCCCccccccCCCcccccCCcceeeeeEEecCcceEec-CC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATG--AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-DP 165 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~--~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-P~ 165 (379)
|||++.+..+|+.|.+|+.+.++.|.+...... ++.. .+| +|+||+.+|.+.++++ ||
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~-~~G------------------~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG-IDG------------------GFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCC-CCC------------------ceEEEEEeccccCeecCCC
Confidence 999999999999999999999999996543211 1111 344 9999999997655554 88
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEe
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~ 244 (379)
++ +.+++++..++.++|++........++++|+|+|+|++|++++++|+.+|+.+||+++.+++|++++++ .|++.++
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88 555556666899997764455556666699999999999999999999999999999999999999999 6666666
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeec
Q 016978 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~ 322 (379)
+..+ .+....+.+.+.+ ++|++|||+|...++.+++++++++ |+++.+|.+..... .++...+ .+++++.|+..
T Consensus 220 ~~~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 220 NPSE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred cCcc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC
Confidence 6554 3677788889988 9999999999999999999999996 99999999754432 3333333 34889988843
Q ss_pred CCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-e-EEEEec
Q 016978 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-L-RCVLKM 377 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~-~-Kvvi~~ 377 (379)
. ....+++.+++++++|++.+.+++++.++++|+++||+.+.+++. . |++|++
T Consensus 296 ~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 296 P--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred C--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 2 233689999999999999999999999999999999999998654 4 999874
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.1e-50 Score=387.42 Aligned_cols=346 Identities=24% Similarity=0.357 Sum_probs=273.6
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCC-------CCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 016978 9 TCKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 81 (379)
-|||+++.++++ ++++++|.|+|+ ++||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 489999999987 999999999874 68999999999999999999988653 346899999999999999999
Q ss_pred CCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCc---cccceecCCCccccccCCCcccccCCcceeeeeEEecCc
Q 016978 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA---TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~---~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~ 158 (379)
|+++++||||++.+..+|+.|.+|++++++.|.+.... ..+|.... | .-.|+|+||+.+|..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechh
Confidence 99999999999999999999999999999999975321 01221100 0 002599999999964
Q ss_pred --ceEecCCCCCc----cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 016978 159 --SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (379)
Q Consensus 159 --~~~~iP~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~ 232 (379)
.++++|++++. ..++++.+.+.++|+++ .++++++|++|||.|+|++|++++|+|+.+|++.|++++.+++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998754 34667777889999986 567899999999998999999999999999996677677888999
Q ss_pred HHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCH--------------HHHHHHHHHhccCCceEEEEcc
Q 016978 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 233 ~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++++++|++.+....+ .++.+.+.+.+.+ ++|++|||+|.+ .++++++++++++ |+++.+|.
T Consensus 224 ~~a~~~Ga~~v~~~~~--~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 224 AQARSFGCETVDLSKD--ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHHcCCeEEecCCc--ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 9999999975433333 4567778888777 899999999985 4799999999997 99999998
Q ss_pred CCCCcccc-----------cCccee-eeccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCcee-eeeecchHHHHHHH
Q 016978 298 AASGQEIS-----------TRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRY 364 (379)
Q Consensus 298 ~~~~~~~~-----------~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~~~~~i~~A~~~ 364 (379)
+....... +..... .++.++.+.. ......+.++++++.++++++.++++ ++|||+|+++||+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 63221111 111111 1133444321 11112346899999999999887777 78999999999999
Q ss_pred HhcCCeeEEEEecC
Q 016978 365 MHGGDCLRCVLKMQ 378 (379)
Q Consensus 365 ~~~~~~~Kvvi~~~ 378 (379)
+.+++..|++|+++
T Consensus 378 ~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 378 FDAGAAKKFVIDPH 391 (393)
T ss_pred HhhCCceEEEEeCC
Confidence 99887679999874
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.3e-50 Score=375.59 Aligned_cols=315 Identities=26% Similarity=0.363 Sum_probs=264.9
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.+.+.| ++++|+|.|+|+++||||||.|++||+.|++.+.|. .+..++|+++|.|++|+|+++|++|+.++
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999998887 889999999999999999999999999999999997 34447899999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||||+.... .| + .|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~~-~~---------------------------~------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALGG-VG---------------------------R------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEccC-CC---------------------------C------------------CCcceeEEEecHHHceeCCCC
Confidence 9999986520 00 1 249999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++++||+++++++|||+++.+..++++|++|||+|+ |++|.+++|||+++|+ +++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999986 9999999999999998 6777767788888999999999999
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 323 (379)
+++ .++.+.+++++++ ++|+|||+.|+ +.+..++.+++++ |+++.+|.........++...+.. .....+....
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 988 7799999999999 99999999999 6688899999997 999999986532333444333332 5555555544
Q ss_pred CC---cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcC-Cee-EEEEec
Q 016978 324 GF---KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVLKM 377 (379)
Q Consensus 324 ~~---~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~-~~~-Kvvi~~ 377 (379)
.. ...+.+.++.+++.+|++++. ++.+|||+|..+|......+ +.. |+||++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 22 123456779999999999954 78999999966665544433 554 999974
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.2e-49 Score=375.36 Aligned_cols=338 Identities=24% Similarity=0.355 Sum_probs=276.6
Q ss_pred CccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 016978 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
.+|+.++++.+.+..+++.+.+++.|+|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 45566777777776666999999999999999999999999999999999887654567899999999999999999999
Q ss_pred cCCCCEEeecCC-cCCCCCccccCCCCCCCCCccCcc-cc---ceecCCCccccccCCCcccccCCcceeeeeEEecCcc
Q 016978 85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGAT-GA---GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (379)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~-~~---g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 159 (379)
+++||+|++.+. .+|+.|.+|..+.++.|.+..... .. |.. .+ |+|+||+.+|.+.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~ 148 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK-NY------------------GGYSDMIVVDQHF 148 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCc-CC------------------CccceEEEEchHH
Confidence 999999986554 579999999999999999754310 00 111 12 4999999999999
Q ss_pred eEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhc
Q 016978 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNF 238 (379)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~-~~~~~~l 238 (379)
++++|+++++++|+.++++..|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence 999999999999999999999999987666667899999999999999999999999999 77777666554 5677889
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEE
Q 016978 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i 317 (379)
|+++++++.+ . +.+++.+. ++|+|||++|....+..++++++++ |+++.+|.... ...+++..++. +..+
T Consensus 228 Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i 298 (360)
T PLN02586 228 GADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPLVLGRKLV 298 (360)
T ss_pred CCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHHHhCCeEE
Confidence 9999987654 2 23444443 6999999999877899999999996 99999997532 23444444333 5666
Q ss_pred EeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
.++..+. ..+++++++++.++++++. + ++|+|+|+++||+.+.+++.. |+|+++
T Consensus 299 ~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 299 GGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6665442 3578999999999999853 4 689999999999999999875 999986
No 20
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.3e-48 Score=371.91 Aligned_cols=368 Identities=56% Similarity=0.963 Sum_probs=303.1
Q ss_pred cccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
..+||++++.+++++++++++|.|++.+++|+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.++
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 35699999999888899999999999999999999999999999999988753 34688999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|.+++++.|++.......|.. .++...+-.+|...+++.+.|+|+||++++.+.++++|++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 999999998899999999999999999976532111221 2222222233444445545689999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++++++++.+||+++...+++++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++.
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999988888899999999999999999999999999998679999999999999999999999987
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHh-ccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 016978 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
.+...++.+.+.+.+.+++|+++||+|++..+..++..+ +++ |+++.+|.......+++.+..+..+.++.+++.+.+
T Consensus 243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 321 (373)
T cd08299 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGW 321 (373)
T ss_pred cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCC
Confidence 652234677777776668999999999877788877765 464 999999976433344555433344677888777665
Q ss_pred cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
....++.++++.+.++.+.+.+++.+.|+++++++|++.+.+.+..|+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 322 KSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred ccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 5556788888888888877777788999999999999999987767988864
No 21
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=7.6e-49 Score=370.76 Aligned_cols=338 Identities=22% Similarity=0.339 Sum_probs=280.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++. ++++++|.|+| .++||+|||.++++|++|+..+.+.. ...+|.++|||++|+|+++|++++++++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 78999999886 99999999987 69999999999999999987532211 12358899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|..+.++.|..... +|.. .+ |+|+||+.+|.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-CC------------------CccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999986442 2221 23 4999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++|+++. .+.++|++ ++...+++|++|||+|+|++|++++|+|+.+|++.|++++++++++++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998774 45567877 46678899999999999999999999999999955889999999999999999999998765
Q ss_pred CCchHHHHHHHhcCC-Ccc-EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccC-cceee-eccEEEeeecCC
Q 016978 249 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR-PFQLV-TGRVWKGTAFGG 324 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-g~d-~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~ 324 (379)
.+ .+.+.+.+.+ ++| ++|||+|...++..++++++++ |+++.+|....+..++.. ...++ +++++.+++.+.
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 33 4456666666 888 9999999988899999999996 999999976432222211 11223 478888876542
Q ss_pred Cc--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 325 FK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 ~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
.. ...++++++++++++++++.++++++|+|+|+++|++.+.+++.. |+|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 21 235788999999999999888999999999999999999988865 999986
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.5e-48 Score=368.31 Aligned_cols=332 Identities=24% Similarity=0.338 Sum_probs=270.9
Q ss_pred eeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCEE
Q 016978 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (379)
Q Consensus 12 a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (379)
++...+.++++.+.+++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++++++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 34444444458888999999999999999999999999999998876444578999999999999999999999999999
Q ss_pred eecCCc-CCCCCccccCCCCCCCCCccCcc----ccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 92 IPCYQA-ECRECKFCKSGKTNLCGKVRGAT----GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 92 ~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~----~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
++.+.. +|+.|.+|+++++++|.+..... ..|.. . .|+|+||+.+|++.++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~------------------~G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR-N------------------QGGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCc-C------------------CCccccEEEEchHHeEECCCC
Confidence 876654 69999999999999999864310 01111 1 249999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEe
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFV 244 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~ 244 (379)
++++++++++++..|+|+++..... .++|++|||.|+|++|++++|+|+.+|+ +|++++.+++ +.++++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999998754432 3689999999999999999999999999 7888876654 57888999999998
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecC
Q 016978 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 323 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 323 (379)
++.+ . +.+.+.+. ++|++|||+|.+..+..++++++++ |+++.+|.... ...+++..++ +++++.++..+
T Consensus 229 ~~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 229 VTTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred cCcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCeEEEEeCcc
Confidence 8654 2 34445443 7999999999977889999999996 99999997533 2344444443 37788887654
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
. ..+++++++++++|++++. + +.|||+|+++|++.+.+++.. |+|+++.
T Consensus 300 ~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 300 G---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred C---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 3 3578999999999999854 4 679999999999999998875 9999863
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4.1e-48 Score=365.81 Aligned_cols=333 Identities=29% Similarity=0.446 Sum_probs=281.1
Q ss_pred eeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC-CCCCCCcccccceeEEEEEeCCCCCCcCCCCEE
Q 016978 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (379)
Q Consensus 13 ~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (379)
+++.+++++++++++|.|+++++||+|||.++++|++|++.+.+.. +..++|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4677788779999999999999999999999999999998874433 233568999999999999999999887 99999
Q ss_pred eecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC------
Q 016978 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 165 (379)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~------ 165 (379)
++.+..+|+.|.+|..+++++|.+... .|.. .+ |+|+||+.+|.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999986543 2221 23 4999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++++.+++++.++|+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999988889999999864 5789999999999999999999999999999 7999999999999999999999988
Q ss_pred CCCCC-chHHHHHHHhcCC-Ccc----EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEE
Q 016978 246 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK 318 (379)
Q Consensus 246 ~~~~~-~~~~~~i~~~~~~-g~d----~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~ 318 (379)
+.+.+ .++.+.+++.+++ ++| ++|||+|+...+..++++++++ |+++.+|..... .+++...++. +.++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAK--TEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCC--cccCHHHHhhcccEEE
Confidence 76522 3577778888877 886 8999999988888999999996 999999986432 2333333333 56777
Q ss_pred eeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 319 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
+.+.. ...+++++++++.++++++.++++ .|+|+|+++||+.+.+++.. |+++++
T Consensus 294 g~~~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 294 GNWGC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEecC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 76543 235789999999999999877765 79999999999999998876 988863
No 24
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.2e-47 Score=364.80 Aligned_cols=364 Identities=56% Similarity=0.993 Sum_probs=310.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
+||+++.+.++++.++++|.|.+.+++|+||+.++++|++|++.+.+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47899999887799999999999999999999999999999999888654 34678999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|.+|+.+.+++|+........|.. .+|...+--+|+..+|+.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999999899999999999999999887754444433 4444444446777778778899999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++.+++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+..|++++++++++++++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999988888899999999999889999999999999999668888889999999999999999987662
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhc-cCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCccc
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (379)
+.++.+.+++.+.+++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.++++..+...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 2267778888775599999999998788999999999 96 999999875322344555545444677778776666666
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
..+.++++++.++.+.+.+++.++|+++|+++|++.+.+++..|++|+
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 788999999999999877678899999999999999988777788774
No 25
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=4.2e-48 Score=366.67 Aligned_cols=334 Identities=23% Similarity=0.338 Sum_probs=263.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC---CCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++..++.++.++++|.|+|+++||+|||.+++||++|++.+.|.++.. .+|.++|||++|+|+++|++ ++++
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 6888888654349999999999999999999999999999999998875322 46789999999999999999 9999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||||++.+...|+.|.+|..+++++|...... ..|....+ |+|+||+.+|++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999998889999999999999999864421 11211122 49999999999999999999
Q ss_pred CCccccccccccchhhhhhhh------hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHh
Q 016978 167 APLDKVCLLGCGVPTGLGAVW------NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 237 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~---~~~~~~~~~~ 237 (379)
++ +. +++..++.++++++. ...+.++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 43 344445555444331 22336789999999999999999999999999 7999887 6889999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccC----ccee-e
Q 016978 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR----PFQL-V 312 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~----~~~~-~ 312 (379)
+|++. +++.+ .++.+ . +. .+++|+||||+|++..+..++++++++ |+++.+|........+++ ...+ .
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-KL-VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-hh-cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99987 45544 33333 2 11 248999999999977899999999996 999999986542333443 1222 3
Q ss_pred eccEEEeeecCCCcccccHHHHHHHHHcCCC----CCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 313 TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI----KVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
+++++.|+.... ..+++++++++.++.+ .+.++++++|+++|+++|++.+.++. .|+||+|
T Consensus 291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 478888875432 3578899999988773 25567899999999999999887654 5999975
No 26
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.5e-47 Score=361.19 Aligned_cols=347 Identities=22% Similarity=0.291 Sum_probs=282.5
Q ss_pred CCCCCccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCC
Q 016978 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (379)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 80 (379)
|.+......++|+++.++++++.+++++.|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 44444555689999999999999999999999999999999999999999999988765556789999999999999999
Q ss_pred CCCCcCCCCEEeecCC-cCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcc
Q 016978 81 GVTEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (379)
Q Consensus 81 ~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 159 (379)
+++++++||+|++.+. .+|+.|.+|.++.++.|.........++ ..| ....|+|+||+.+|.+.
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~ 145 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKF 145 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHH
Confidence 9999999999986654 4799999999999999987532100000 001 11135999999999999
Q ss_pred eEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhc
Q 016978 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNF 238 (379)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~l 238 (379)
++++|+++++++++.+++++.|||+++.+....++|++|+|+|+|++|++++|+|+.+|+ ++++++.++++++. ++++
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL 224 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence 999999999999999999999999987666666899999999999999999999999999 67877777766654 4679
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEE
Q 016978 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 317 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i 317 (379)
|+++++++.+ . ..+.+.+. ++|++|||+|....+..++++++++ |+++.+|.... ..++.+..++ +++++
T Consensus 225 Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i 295 (357)
T PLN02514 225 GADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVI 295 (357)
T ss_pred CCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEE
Confidence 9988876544 2 23444443 7999999999877899999999996 99999998643 2344444333 37888
Q ss_pred EeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
.+++.+. ..+++++++++++++++ +++ ++|+|+|+.+|++.+.+++.. |+||+++
T Consensus 296 ~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 296 TGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred EEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 8886553 25789999999999876 445 689999999999999998876 9999875
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.3e-47 Score=359.09 Aligned_cols=321 Identities=22% Similarity=0.310 Sum_probs=269.6
Q ss_pred eeeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 13 AVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 13 ~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
+.+.+++. +++++++|.|+|+++||+|||.++++|++|++.+.|..+....|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 45666653 38899999999999999999999999999999998876544457899999999999999999999999
Q ss_pred CEEeecCC-cCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 89 d~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
|+|++.+. .+|+.|.+|..++++.|.+... +|.. .+ |+|+||+.+|.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99987654 5799999999999999987653 2322 23 499999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46789999999999999999999999999999 799999999999999999999998754
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCc
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK 326 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 326 (379)
+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ...+++..+ .+++++.+++..
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~--- 281 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN--- 281 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC---
Confidence 3 11 136899999988888899999999996 999999975322 123333332 336777776533
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.+.++.++++++.+++++ +++++|+|+|+++|++.+.+++.. |+||.
T Consensus 282 ~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 282 TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 235788899999999986 357899999999999999999886 99873
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=6.6e-47 Score=359.48 Aligned_cols=348 Identities=28% Similarity=0.439 Sum_probs=289.7
Q ss_pred eeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 016978 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE------ 84 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~------ 84 (379)
||+++.++++++++++++.|.|++++|+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999999867999999999999999999999999999999998887653457889999999999999999986
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc-ceEec
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAKI 163 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~i 163 (379)
+++||+|++.+..+|+.|.+|+.+.+++|.+... +|.....| .....|+|++|+.++++ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~------------~~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCD------------DPHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchh---cccccccc------------CCCCCcccceEEEecCCCceEEC
Confidence 9999999999999999999999999999987653 33221000 00013599999999986 79999
Q ss_pred CCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 016978 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
|+++++.+++++++++.|||+++.+....++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++++
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999988999999998776667799999999999999999999999999789999899999999999999999
Q ss_pred eCCCCCC-chHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEee
Q 016978 244 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 320 (379)
Q Consensus 244 ~~~~~~~-~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~ 320 (379)
+++++.. .++...+++.+++ ++|++|||+|+...+..++++++++ |+++.+|........++.+..++ ++.++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8876521 2234567788877 9999999999877899999999996 99999997643333344443323 37777776
Q ss_pred ecCCCcccccHHHHHHHHHcC--CCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 321 AFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~--~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
+.. ..+++.++++++.++ .+.+.++++++|+++|+++|++.+.+++..|+||++
T Consensus 306 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 306 HNY---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccC---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 543 335788999999888 666777889999999999999999988767999863
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=9.9e-47 Score=356.91 Aligned_cols=335 Identities=28% Similarity=0.476 Sum_probs=285.3
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---C--------CCCCCcccccceeEEEEEe
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---P--------EGLFPCILGHEAAGIVESV 78 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~--------~~~~p~~~G~e~~G~V~~v 78 (379)
|||+++.++++ ++++++|.|+|.++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998876 9999999999999999999999999999987665321 1 1136889999999999999
Q ss_pred CCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc
Q 016978 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~ 158 (379)
|++++.+++||+|++.+..+|++|.+|.++.++.|..... .|....+ |+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG------------------GGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC------------------CceeeEEEechH
Confidence 9999999999999999999999999999999999986432 2211012 499999999999
Q ss_pred ceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 016978 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l 238 (379)
.++++|+++++++++.+ .++.+||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5778999987 778899999999999999999999999999997799998999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccE
Q 016978 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 316 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 316 (379)
|++.++++++ .++.+.+++.+++ ++|++||++|....+..++++++++ |+++.+|... ...++++..+. ++++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcE
Confidence 9999999876 6788888888877 7999999999877899999999996 9999999864 23344443333 3788
Q ss_pred EEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchH-HHHHHHHhcCCe--eEEEEe
Q 016978 317 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI-NEAFRYMHGGDC--LRCVLK 376 (379)
Q Consensus 317 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i-~~A~~~~~~~~~--~Kvvi~ 376 (379)
+.+.+.. ...++++++++++++++++.++++++|+++|+ ++|++.+.+++. .|+||.
T Consensus 292 i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 292 LTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8877543 23689999999999999887888999999996 799999988885 499873
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.2e-47 Score=322.84 Aligned_cols=316 Identities=24% Similarity=0.292 Sum_probs=272.5
Q ss_pred CccccceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 016978 5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 5 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 82 (379)
..|+..|.+++++.|.+ ++++++|.|+|.|++++||-.|+|+|..|..+..|.+...++|++||.|.+|+|+++|+.|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 45778899999999987 8899999999999999999999999999999999999877899999999999999999999
Q ss_pred CCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEe
Q 016978 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ 162 (379)
+++++||||+..- ..|.|+|+..+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999997431 124999999999999999
Q ss_pred cCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 016978 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (379)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~ 241 (379)
+|+.+++.+||++....+|||..+++..+++||++|||+.| |++|+++.|+++..|+ .+|++.++.+|++.+++.|+.
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999998999999999999999999999999965 9999999999999999 899999999999999999999
Q ss_pred eEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee--ccEEE
Q 016978 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWK 318 (379)
Q Consensus 242 ~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~--~~~i~ 318 (379)
+.++++. +|+.+++.+.|++ |+|+++|..|. +++...+.+|++. |++|.+|+.+.. .-+++ ...+. .+.+.
T Consensus 194 h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl-~~p~~-l~~ls~k~l~lv 267 (336)
T KOG1197|consen 194 HPIDYST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGL-IDPIP-LNQLSPKALQLV 267 (336)
T ss_pred ceeeccc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCC-CCCee-hhhcChhhhhhc
Confidence 9999988 8999999999999 99999999999 7799999999996 999999986432 11222 11122 33332
Q ss_pred -eeecCCCcccc----cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 319 -GTAFGGFKSRS----QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 319 -~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
.+.++-...+. ...+++.++.++.+++. |+++|||+++.+|+.+++++... |+++...
T Consensus 268 rpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 268 RPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred cHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 22222222222 34567778888998865 89999999999999999999987 9998754
No 31
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.7e-46 Score=352.73 Aligned_cols=362 Identities=36% Similarity=0.664 Sum_probs=293.1
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
++|||+++.++++++++++.+.|++.+++|+||+.++++|++|++...|..+ ..+|.++|||++|+|+++|+++..+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4689999999877799999999999999999999999999999999888654 346889999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccc-cCCCcc-cccCCcceeeeeEEecCcceEecCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
||+|++.+. .|+.|.+|..+..++|........+|.. ++|-.... .+|++. .+++..|+|++|+.++++.++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998775 8999999999999999876533222221 11100000 001110 0133457999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++++.+++++.+|+.++.+...+++|++|||+|+|++|++++|+|+.+|+.++++++++++|.++++++|++++++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998888889999999999988999999999999999977999999999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCC
Q 016978 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGG 324 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 324 (379)
+++ .++.+.+.+.+.+++|+++||+|+...+..++++++++ |+++.+|.........++...+ .++.++.++....
T Consensus 238 ~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 238 PKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 876 57777788877339999999999877899999999996 9999999753222334444443 3467776665433
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
....+.++++++++.++++.+.+. .+.|+++++++|++.+.+++..|+||+
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 322356788999999999865333 468999999999999998887799885
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-45 Score=349.19 Aligned_cols=342 Identities=25% Similarity=0.349 Sum_probs=284.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +.+++.+.|.+.+++|+||+.++++|++|++.+.+..+..+.|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999987 89999999999999999999999999999998887665556688999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCCCC
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~ 167 (379)
+|++.+..+|+.|..|..++++.|.+... +++.. ....|+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~--~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG--GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC--Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 99998888999999999999999987531 11100 0112499999999974 899999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.++..+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+++++++++++.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999988999999984 778899999999998899999999999999997799999999999999999999999887
Q ss_pred CCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccC--ccee-eeccEEEeeecC
Q 016978 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR--PFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~~~~-~~~~~i~~~~~~ 323 (379)
+ .++.+.+.+.+.+ ++|++|||+|+...+..++++++++ |+++.+|.........++ ++.. ....++.+....
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 296 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP 296 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence 6 5677788887766 8999999999878899999999996 999999976543223332 1111 224445443321
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCc-eeeeeecchHHHHHHHHhcCCe--eEEEEec
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEY-VTHNMTLGEINEAFRYMHGGDC--LRCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~~~i~~A~~~~~~~~~--~Kvvi~~ 377 (379)
...++++++++++.++++++.+. +.+.|+++|+++|++.+++++. .|++|++
T Consensus 297 --~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 --GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred --CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 13467899999999999997443 4456999999999999998874 4999975
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.4e-46 Score=350.52 Aligned_cols=320 Identities=17% Similarity=0.223 Sum_probs=252.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC----CCCCcccccceeEEEEEeCCCCCCc
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
-|+++++++++ ++++|+|.|+ +++||+|||.++|||++|++.++|.++. ..+|.++|||++|+|+++|.+ .+
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~ 78 (341)
T cd08237 3 NQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY 78 (341)
T ss_pred ccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence 47899999998 9999999995 9999999999999999999999987532 257999999999999998875 79
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC
Q 016978 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
++||||++.+..+|+ |+.|. ..+.|.+... +|.. .+| +|+||+.+|++.++++|+
T Consensus 79 ~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 79 KVGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSG-YDG------------------FMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred CCCCEEEECCCCCch-hcccc--hhccCCCcce---eEec-CCC------------------ceEEEEEEchHHeEECCC
Confidence 999999999887877 55663 5577876432 2322 334 999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhh--ccCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCce
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
++++++|+++. +++++|+++.. ...+++|++|||+|+|++|++++|+|+. +|+.+|++++++++|++++++.+++.
T Consensus 134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~ 212 (341)
T cd08237 134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY 212 (341)
T ss_pred CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence 99999887554 78888988643 3456899999999999999999999996 66658999999999999998866543
Q ss_pred EeCCCCCCchHHHHHHHhcCC-CccEEEEcCC---CHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEE
Q 016978 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 317 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i 317 (379)
.++ + ...+ ++|+|||++| .+.++..++++++++ |+++.+|.... ..+++...++ +++++
T Consensus 213 ~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i 276 (341)
T cd08237 213 LID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY--PVPINTRMVLEKGLTL 276 (341)
T ss_pred ehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC--CcccCHHHHhhCceEE
Confidence 221 1 1122 7999999999 456799999999996 99999997532 3344444333 47888
Q ss_pred EeeecCCCcccccHHHHHHHHHcC---CCCCCCceeeeeecc---hHHHHHHHHhcCCeeEEEEecC
Q 016978 318 KGTAFGGFKSRSQVPWLVDKYMKK---EIKVDEYVTHNMTLG---EINEAFRYMHGGDCLRCVLKMQ 378 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~i~~~~~~~---~i~~A~~~~~~~~~~Kvvi~~~ 378 (379)
.++..+ ...+++++++++.++ +.++.++++++|+++ |+++|++...++...|+||+++
T Consensus 277 ~g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 277 VGSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 887543 235789999999998 335678899999985 5666666665553449999875
No 34
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.3e-44 Score=343.82 Aligned_cols=360 Identities=44% Similarity=0.780 Sum_probs=292.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.+++++++|.|++.+++|+||+.++++|+.|+.++.|..+ ..+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999988899999999999999999999999999999998888665 34678899999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|++|.+|++++.++|.+.... -+|.. .++...+---|.........|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999875421 00000 0000000000111111123469999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++++++.+||.++....++.+|++|||+|+|++|++++++|+.+|+.+|+++++++++.++++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998888889999999999988999999999999999955999999999999999999999988876
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCcc
Q 016978 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 327 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~ 327 (379)
.++...+++.+.+ ++|+++|++++...+..++++++++ |+++.+|.........+....+. .+..+.++.++....
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 5677778887765 8999999999777899999999996 99999987543233344444433 255556665544344
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 375 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi 375 (379)
...++++++++.++++.+.+.+.++|+++|+++|++.+.+++..|.||
T Consensus 315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 567889999999999987666788999999999999999888776665
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.1e-44 Score=341.27 Aligned_cols=334 Identities=22% Similarity=0.388 Sum_probs=277.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +.++++|.|+|.+++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999999886 99999999999999999999999999999999888765556789999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|.+|.++++++|.+... ++.. .+ |+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-cC------------------CcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999986542 2211 23 49999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
++++ +...+.++|+ +.+..++++|++|||+|+|++|++++|+|+. +|+..+++++++++|.++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4457778886 5677889999999999999999999999996 69967888999999999999999999998865
Q ss_pred CCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCc
Q 016978 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 326 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 326 (379)
.++.+.+... + ++|++||++|.+..+..++++++++ |+++.+|.... ...+....+. +++++.+...
T Consensus 216 --~~~~~~~~~~--g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 216 --EPLGEALEEK--GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred --ccHHHHHhcC--CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----
Confidence 5566665432 3 5789999999877899999999996 99999987532 2222222222 2455554432
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC-e-eEEEEecCC
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKMQD 379 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~-~-~Kvvi~~~~ 379 (379)
....++++++++.++++.+.+++.+.|+++++++|++.+.+++ . .|+|+.+.|
T Consensus 285 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2357889999999999987666789999999999999998654 3 499999875
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=8.2e-45 Score=349.98 Aligned_cols=331 Identities=19% Similarity=0.249 Sum_probs=263.9
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccc-cCCCC-C-----CCCCcccccceeEEEEEeCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDP-E-----GLFPCILGHEAAGIVESVGE 80 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~-~g~~~-~-----~~~p~~~G~e~~G~V~~vG~ 80 (379)
|+||++++.+++. ++++++|.|+|+++||+|||.++|||++|++.+ .|... . .++|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 4689999999987 999999999999999999999999999999976 44321 1 14688999999999999999
Q ss_pred CCC-CcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc-
Q 016978 81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 158 (379)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~- 158 (379)
+++ .+++||||++.+...|+.|..|.. +|.. .+| +|+||+.+|.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~-~~G------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYT-YPG------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------cccc-CCC------------------cceEEEEecHHh
Confidence 998 599999999998888988887721 1211 234 99999999987
Q ss_pred ---ceEecCCCCCccccccc-cccc-hhhhhhh--------hhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 016978 159 ---SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRV 222 (379)
Q Consensus 159 ---~~~~iP~~~~~~~aa~l-~~~~-~ta~~~l--------~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g--~~~v 222 (379)
.++++|+++++++|+++ +.+. .+++.++ .+.+++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999998865 2111 1233322 24578899999999985 999999999999985 4579
Q ss_pred EEEcCChhHHHHHHhc--------CCc-eEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceE
Q 016978 223 IGIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTS 292 (379)
Q Consensus 223 i~v~~~~~~~~~~~~l--------g~~-~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~i 292 (379)
++++++++|+++++++ |++ .++++.+ ..++.+.+++.+++ ++|++||++|.+..+..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 776 4676643 14677888888887 9999999999888899999999996 888
Q ss_pred EEEccCC-CCcccccCcceeee-ccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe
Q 016978 293 VIVGVAA-SGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC 370 (379)
Q Consensus 293 v~~g~~~-~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~ 370 (379)
+.++... .....+++...+.. ++++.++..+ ...+++++++++++|++++.++++++|+|+|+++|++.+. ++.
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~ 360 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIP 360 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccC
Confidence 7765422 11123444444433 7888887543 2357999999999999999889999999999999999999 554
Q ss_pred e-EEEEecC
Q 016978 371 L-RCVLKMQ 378 (379)
Q Consensus 371 ~-Kvvi~~~ 378 (379)
. |+||..+
T Consensus 361 ~gKvvl~~~ 369 (410)
T cd08238 361 GGKKLIYTQ 369 (410)
T ss_pred CceEEEECC
Confidence 4 9999763
No 37
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=7.1e-44 Score=336.85 Aligned_cols=340 Identities=29% Similarity=0.460 Sum_probs=285.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++.+++. +.+.++|.|.| .+++|+||+.++++|++|+..+.|.++..++|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998887 89999999999 89999999999999999999998877666678999999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.+...|+.|.+|.+++..+|.+.....+.|. ...|+|++|++++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999987553221111 123499999999987 99999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++.+++++.+||+++ ...++++|++|||.|+|++|++++|+|+.+|+.+++++++++++.+.++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999986 77889999999998889999999999999997578888888999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
++ .++.+.+++.+++ ++|++||+.|+...+..++++++++ |+++.+|..............+..+.++.+....
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP-- 294 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccC--
Confidence 76 5687888887776 8999999999866799999999996 9999998653321111112122335555554322
Q ss_pred cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-e-EEEEe
Q 016978 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-L-RCVLK 376 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~-~-Kvvi~ 376 (379)
....++++++++.++.+.+.+.+...|+++++++|++.+..++. . |+|++
T Consensus 295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 24578889999999999876556788999999999999988776 4 98876
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6e-44 Score=335.43 Aligned_cols=330 Identities=27% Similarity=0.452 Sum_probs=280.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.++.++++|.|++.+++|+||+.++++|++|+..+.|..+....|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999966699999999999999999999999999999999888665445688999999999999999999999999
Q ss_pred EEeecC-CcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
+|++.+ ...|+.|.+|..+.++.|..... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 57899999999999999997653 2221 22 4999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++++.+++.+.+||+++.. .++++|++|||+|+|++|++++++|+.+|+ +|+++++++++++.++++|+++++++..
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998754 589999999999999999999999999999 7999999999999999999999998866
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCcc
Q 016978 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 327 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 327 (379)
.++.+.+++. +++|+++|++|.+..+..++++++++ |+++.+|... ...+++...+ .+++++.++..+.
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---
Confidence 5566666665 37999999998767899999999996 9999999864 2344443333 3378888776432
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
..++..+++++..++++. ++ +.|+++|+++|++.+.+++.. |+|++
T Consensus 287 ~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 357888888888887764 34 689999999999999998876 99875
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.2e-43 Score=337.69 Aligned_cols=349 Identities=28% Similarity=0.396 Sum_probs=284.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.++++ +.+.+.|.|+| .+++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999998866 99999999988 49999999999999999999999987666678899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCccccc--------CCcceeeeeEEecCc--
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHF--------MGTSTFSQYTVVHDV-- 158 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~--------~~~g~~~~~~~v~~~-- 158 (379)
|+|++.+...|+.|++|..+.+++|.+......+ ++ ++|+.-+.. ...|+|++|+.++.+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~ 149 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEM-----AK-----LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADV 149 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccc-----cc-----ccccccccccccccccCCCCCeeEEEEEcccccC
Confidence 9999998889999999999999999976532100 00 000000000 113699999999988
Q ss_pred ceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 016978 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l 238 (379)
.++++|+++++++|++++..+.+||+++ +.+++.+|++|||+|+|++|++++++|+.+|+.+++++++++++.++++++
T Consensus 150 ~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~ 228 (386)
T cd08283 150 GPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSH 228 (386)
T ss_pred eEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 8999999999999999999999999987 788899999999998899999999999999985699999999999999998
Q ss_pred CCceEeCCCCCCc-hHHHHHHHhcCC-CccEEEEcCCC---------------------HHHHHHHHHHhccCCceEEEE
Q 016978 239 GVTEFVNPKDHDK-PIQQVLVDLTDG-GVDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 239 g~~~v~~~~~~~~-~~~~~i~~~~~~-g~d~vid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
+...++++.+ . ++.+.+++.+.+ ++|++||++|+ ...+..++++++++ |+++.+
T Consensus 229 ~~~~vi~~~~--~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~ 305 (386)
T cd08283 229 LGAETINFEE--VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSII 305 (386)
T ss_pred CCcEEEcCCc--chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEE
Confidence 5446777665 4 478888888877 89999999875 34689999999996 999999
Q ss_pred ccCCCCcccccCcc-eeeeccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eE
Q 016978 296 GVAASGQEISTRPF-QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LR 372 (379)
Q Consensus 296 g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~--~K 372 (379)
|..... ...+++. .+.++.++.+.... ....+.++++++.++++.+.+++.+.|+++|+++|++.+.+++. .|
T Consensus 306 g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 381 (386)
T cd08283 306 GVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIK 381 (386)
T ss_pred cCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEE
Confidence 875432 2233332 22336666665322 23578889999999999876667889999999999999988773 49
Q ss_pred EEEec
Q 016978 373 CVLKM 377 (379)
Q Consensus 373 vvi~~ 377 (379)
+||+.
T Consensus 382 ~~~~~ 386 (386)
T cd08283 382 VVLKP 386 (386)
T ss_pred EEecC
Confidence 99863
No 40
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.6e-43 Score=333.39 Aligned_cols=336 Identities=26% Similarity=0.404 Sum_probs=279.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC---------CCCCcccccceeEEEEEeCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---------GLFPCILGHEAAGIVESVGE 80 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~V~~vG~ 80 (379)
|||++++++++ +++++++.|++.+++|+||+.++++|+.|+..+.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 78999998887 999999999999999999999999999999988775311 14677899999999999999
Q ss_pred CCC--CcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc
Q 016978 81 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 81 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~ 158 (379)
+++ .+++||+|++.+..+|+.|.+|..+++++|.... .+|... ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence 999 8999999999999999999999999999997543 233210 012499999999988
Q ss_pred -ceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 016978 159 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 159 -~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
.++++|+++++++++++ .++.++|+++ +.+++++|++|||.|+|++|++++++|+.+|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7889999986 77899999999997789999999999999998678889899999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccE
Q 016978 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 316 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~ 316 (379)
+|++.++++.. .++.+.+.+.+++ ++|++||++|....+..++++++++ |+++.+|.......+++......++++
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 99999888765 6777888888777 8999999999767789999999996 999999865432222221111123556
Q ss_pred EEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 317 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 317 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
+.++.... ..+.+++++++++.+++.+++.+.|+++++++|++.+++++.. |+|+
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 66554332 3678899999999998765578999999999999999988765 8874
No 41
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=4.3e-43 Score=331.31 Aligned_cols=337 Identities=28% Similarity=0.423 Sum_probs=285.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++. ++++++|.|+| .+++|+||+.++++|+.|+..+.|..+..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999999887 99999999986 89999999999999999999998876655568899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.+...|+.|.+|..++.+.|....+. .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999999899999999999999999865331 1211 22 499999999987 89999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+++.+++.+.+||.++....++.+|++|||.|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877778889999999999889999999999999994489999899999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 324 (379)
++ .++.+.+.+.+.+ ++|++|||+|....+..+++.++++ |+++.+|.... ...+++.. +.+++++.+....
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc-
Confidence 76 5677778887776 8999999999877889999999996 99999986432 23344433 2336666654321
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC---eeEEEEec
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD---CLRCVLKM 377 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~---~~Kvvi~~ 377 (379)
...+.+++++++++.+.+.+++.++|+++++++|++.+.+.. ..|+||++
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 145788999999999887777789999999999999988763 35999974
No 42
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=8.5e-44 Score=330.36 Aligned_cols=302 Identities=22% Similarity=0.303 Sum_probs=239.9
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecc-ccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 016978 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
+|||+++.+++. +++++.|.|+|+++||+|||.+++|| ++|++.+.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998887 99999999999999999999999996 7999988887643 2579999999999999999998 6
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
+++||||++. |..|..|.. | .. |+|+||+.+|++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 9999999863 223332211 0 12 399999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++++. ++++ .+.+||+++.+ . ..++++|||+|+|++|++++|+|+++|++.|++++.+++|++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999854 5454 56899998744 3 34689999999999999999999999996677888888887776543 445
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 016978 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
++.+ . ...++|+||||+|+..+++.++++++++ |+++.+|..... .+++...+ .+++++.++...
T Consensus 192 ~~~~--~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 192 DPEK--D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred Chhh--c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC--cccccchhhhcceEEEEeccc
Confidence 4432 1 1238999999999987899999999996 999999986432 33333333 336777765432
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEe
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-LRCVLK 376 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~-~Kvvi~ 376 (379)
...++++++++++++++++.++++++|||+|+++|++.+.+++. .|++|+
T Consensus 258 ---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 ---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23579999999999999998889999999999999998776655 499984
No 43
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=7.4e-43 Score=328.99 Aligned_cols=333 Identities=29% Similarity=0.432 Sum_probs=283.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.++++++.+.+.+.|.+.+++|+||+.++++|++|+..+.|.++ ...+|.++|+|++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999999877899999999999999999999999999999998887654 235688999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+...|+.|.+|+.+..++|..... .|.. .+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIG-TDG------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCcc-CCC------------------cceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999998775 2332 334 9999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++++++.+++.+.|||+++... ..+.+|++|||+|+|.+|++++|+|+.+|..+|+++.+++++.+.++++|++++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 99999999999999999987665 46889999999999889999999999999338898989999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 323 (379)
++. . +.+.+++.+.+ ++|+++|++|+...+..++++++++ |+++.+|.... ..++... +.+++++.+....
T Consensus 219 ~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 219 ASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred CCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc
Confidence 876 4 77788888776 8999999999877799999999996 99999987542 2222222 2346666665433
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
....+.++++++.++.+.+ ..+.|+++++++|++.+.+++.. |+|+.+
T Consensus 292 ---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 292 ---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2357888999999998874 34679999999999999988876 888753
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.6e-42 Score=327.36 Aligned_cols=339 Identities=27% Similarity=0.450 Sum_probs=286.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.++.+++.|.|.+.+++|+||+.++++|++|+..+.|..+...+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999999888899999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCCCC
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~ 167 (379)
+|++.+...|++|.+|+.+..+.|.+... .|.. .+ |+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-CC------------------CcceeEEEcccccCceEECCCCC
Confidence 99987778999999999999999998542 2221 12 499999999974 999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++.+.+||+++.+..++.++++|||+|+|++|++++|+|+.+|+ +|+++.+++++.+.++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999998999999998778889999999999999999999999999999 899998999999999999999998875
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc-cccCccee-eeccEEEeeecCCC
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQL-VTGRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~-~~~~~i~~~~~~~~ 325 (379)
+ ..++...+.++..+++|++|||+|+...+...+++++++ |+++.+|....... ..++...+ .++.++.+....
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 245666777766558999999999767789999999996 99999987543221 23333333 235666665432
Q ss_pred cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
....+++++++++++++.+.+++.+.++++++++|++.+++++.. |+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 235788899999999988766678899999999999999988876 88864
No 45
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.5e-42 Score=330.24 Aligned_cols=360 Identities=32% Similarity=0.530 Sum_probs=290.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC---cC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~---~~ 86 (379)
|||+++.+++.++++.+.|.|.+.+++|+||+.++++|++|+....+..+. .+|.++|||++|+|+.+|++++. ++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 789999998777999999999999999999999999999999988886654 56789999999999999999988 99
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccC-CCcccccCCcceeeeeEEecCcceEecCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
+||+|++.+..+|+.|.+|..+.+++|.+...+...+....+|+..+... +... -....|+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPV-YMYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcc-ccccCCcceeEEEechhhEEECCC
Confidence 99999998889999999999999999998652211110001110000000 0000 001246999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++.+++.+++++.|||+++.....+.++++|||+|+|++|++++++|+.+|+.+++++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999888888899999999988999999999999999955999989999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
+++ .++.+.+++...+ ++|++||++++.+.+..++++++++ |+++.+|.........++...+ ..+.++.+++..
T Consensus 239 ~~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AAK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CCc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 876 6777788887766 8999999999965789999999996 9999998754322333443443 236666654321
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.....++++++++.++.+.+.+.+.+.|+++++.+|++.+++++.. |+||+
T Consensus 316 --~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 --RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred --CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1235788899999999998766678899999999999999998876 88874
No 46
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2e-42 Score=327.32 Aligned_cols=336 Identities=28% Similarity=0.432 Sum_probs=282.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC------------CCCCCcccccceeEEEEE
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP------------EGLFPCILGHEAAGIVES 77 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~ 77 (379)
|||+++..++.++++.++|.|++.+++|+||+.++++|++|+..+.|..+ ..++|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 79999998888899999999999999999999999999999998877643 224577899999999999
Q ss_pred eCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecC
Q 016978 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 157 (379)
+|++++++++||+|++.+...|+.|..|.++.+++|..... .|.. .. |+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-QD------------------GGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-cc------------------CcceeeEEecH
Confidence 99999999999999999999999999999999999976432 2211 22 49999999999
Q ss_pred cceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 016978 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+.++++|+++++.+++.+.+.+.+||+++.....+.++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998777667789999999889999999999999999778899899999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEE
Q 016978 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVW 317 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i 317 (379)
+|++.+++.++ .++.+.+.+...+++|++||+.|....+..++++++++ |+++.+|........+.... .+.+.++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI 294 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence 99988888765 56666777766558999999999777899999999996 99999987543222222221 1246666
Q ss_pred EeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.+..... .+++.+++++++++.+.+. ....|+++++++|++.+.+++.. |++++
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 6655432 2578889999999988753 56789999999999999988876 98875
No 47
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=7.9e-42 Score=322.53 Aligned_cols=338 Identities=28% Similarity=0.418 Sum_probs=276.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCC-CCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~-~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++..++. +++++++.|+|. +++|+||+.++++|+.|+....|.++ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 68999988754 999999999985 99999999999999999998888665 3357889999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.+..+|+.|.+|++++.+.|.+... +|.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 999999989999999999999999986432 1110 0 00013499999999865 99999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++.++++++|||+++. .+++.+|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 57899999999998899999999999999975788998889999999999985 4555
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 324 (379)
+. .++...+.+.+++ ++|++||++|+...+..++++++++ |+++.+|..... ........ +..+.++....
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence 44 5677788888776 9999999999877899999999996 999999975421 22222222 22355554331
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
......++++++++.++.+.+.+++.+.|+++++++|++.+.+++..|+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 1234678999999999998876567889999999999998887666788874
No 48
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=6.2e-42 Score=328.88 Aligned_cols=340 Identities=21% Similarity=0.271 Sum_probs=275.6
Q ss_pred ccccceeeeeec--CCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC----------CCCCCcccccc
Q 016978 6 QVITCKAAVAWE--PNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHE 70 (379)
Q Consensus 6 ~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e 70 (379)
.|.+|||+++.. .+.+ +++.++|.|.+.+++|+||+.++++|++|++...+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 467899998853 3333 78899999999999999999999999999988766411 01122488999
Q ss_pred eeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceee
Q 016978 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (379)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 150 (379)
++|+|+++|++++.+++||+|++.+...|+.|..|..+..++|..... +|+...+ |+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~------------------g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNY------------------GSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCC------------------Ccce
Confidence 999999999999999999999999999999999999999999986543 3432122 4999
Q ss_pred eeEEecCcceEecCCCCCccccccccccchhhhhhhhhc--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 016978 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 151 ~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
+|+.++...++++|+++++++++.+++.+.+||+++... +++++|++|||+|+ |++|++++++|+.+|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999987654 67899999999997 9999999999999999 7778889
Q ss_pred ChhHHHHHHhcCCceEeCCCCCC--------------------chHHHHHHHhcCC--CccEEEEcCCCHHHHHHHHHHh
Q 016978 228 DPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECC 285 (379)
Q Consensus 228 ~~~~~~~~~~lg~~~v~~~~~~~--------------------~~~~~~i~~~~~~--g~d~vid~~g~~~~~~~~~~~l 285 (379)
++++++.++++|+++++++++.+ ..+.+.+.+++++ ++|++||++|+ ..+..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence 99999999999999998864311 1356677787776 79999999998 6689999999
Q ss_pred ccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHH
Q 016978 286 HKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRY 364 (379)
Q Consensus 286 ~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~ 364 (379)
+++ |+++.+|..... ...+....+ ..+.++.+.+... ..++.++++++.++.+.+ .+.++|+++|+++|++.
T Consensus 306 ~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~ 378 (393)
T cd08246 306 DRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQL 378 (393)
T ss_pred ccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHH
Confidence 996 999999875321 122222222 2356666654432 247888999999998874 36789999999999999
Q ss_pred HhcC-Cee-EEEE
Q 016978 365 MHGG-DCL-RCVL 375 (379)
Q Consensus 365 ~~~~-~~~-Kvvi 375 (379)
+.++ +.. |+|+
T Consensus 379 ~~~~~~~~gkvvv 391 (393)
T cd08246 379 MHRNQHHVGNMAV 391 (393)
T ss_pred HHhCccccceEEE
Confidence 9988 565 8876
No 49
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.3e-41 Score=323.34 Aligned_cols=338 Identities=25% Similarity=0.396 Sum_probs=269.8
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 016978 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
..++++++..++. +.+++.+.|.+.+++|+||+.++++|++|+.++.+... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4466666776665 99999999989999999999999999999998876321 1235778999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
+++||+|++.+..+|+.|..|+.+.++.|..... ++....+ |+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~------------------g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH------------------GSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC------------------CcccceEEcchHHeEECC
Confidence 9999999999999999999999999999986321 2211112 499999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++.++++.. .+.++|+++ ...++.+|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|+++++
T Consensus 154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999999887522 344577775 778899999999999999999999999999996788898899999999999999887
Q ss_pred CCCCCCchHHHHHHHh---cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEee
Q 016978 245 NPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 320 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~---~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~ 320 (379)
+++....++.+.+.+. +.+++|++||++|+...+..++++++++ |+++.+|.... ...+...... +++++.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~ 308 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGV 308 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEe
Confidence 6543224566666554 2348999999999778899999999996 99999997532 1222222222 36677665
Q ss_pred ecCCCcccccHHHHHHHHHcCCCCCCCceeeeeec--chHHHHHHHHhcCCee-EEEEe
Q 016978 321 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTL--GEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~--~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
+.. ...+..++++++++.+.+.+++.+.|++ +++++|++.+.+++.. |+||.
T Consensus 309 ~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 309 FRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred ccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 432 2467889999999998766667788666 7999999998888765 99985
No 50
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.2e-41 Score=324.65 Aligned_cols=343 Identities=28% Similarity=0.376 Sum_probs=274.3
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++.+++. ++++++|+|.+ .+++|+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 68899988875 99999999986 799999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCc---cccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEec
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGA---TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKI 163 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~---~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~i 163 (379)
|+|++.+..+|+.|..|+.+..+.|...... ..+|.. . ..-..|+|++|+.+|.+ .++++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~--------------~-~~~~~g~~a~y~~v~~~~~~~~~l 143 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYV--------------D-MGPYGGGQAEYLRVPYADFNLLKL 143 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccccccc--------------c-cCCCCCeeeeEEEeecccCcEEEC
Confidence 9999999999999999999999999864321 001100 0 00012599999999976 89999
Q ss_pred CCCCCcc---ccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 164 DPQAPLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 164 P~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
|++++++ +++.++..+.+||+++ ..+++++|++|||.|+|++|++++|+|+++|+.+|++++++++|.++++++|+
T Consensus 144 P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 222 (375)
T cd08282 144 PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222 (375)
T ss_pred CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9999998 5677888899999987 78899999999999889999999999999998678889999999999999998
Q ss_pred ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH-----------HHHHHHHHhccCCceEEEEccCCCCcc------
Q 016978 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWGTSVIVGVAASGQE------ 303 (379)
Q Consensus 241 ~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~~~~------ 303 (379)
..+++++ .++.+.+.+.+.+++|+++||+|+.. .+..++++++++ |+++.+|.......
T Consensus 223 -~~v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 223 -IPIDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred -eEeccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 4566654 56777787776668999999998752 588999999996 99998886532111
Q ss_pred -----cccCcceee-eccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 304 -----ISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 304 -----~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
..++...+. .+..+.+... .....+.+++++++++++++.+++.+.|+++++++|++.+.+++..|+|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 111111111 1333333221 1235688899999999998766688999999999999999988833999863
No 51
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.6e-41 Score=320.13 Aligned_cols=336 Identities=25% Similarity=0.396 Sum_probs=272.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.++++++++.+.|.|+|.+++|+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999988889999999999999999999999999999998765531 1224678899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|..+.+++|.... +.|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTK---GVGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcc---eeeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 9999999999999999999999999998643 12221 23 49999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++.+ ..+.++++++.. ...+|++|+|.|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888754 355566555433 34689999999889999999999999999668888889999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 324 (379)
++ .++.+.+++.+++ ++|++|||.|+...+..++++++++ |+++.+|.......++ ...+ +++.++.++...
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~--~~~~~~~~~~l~~~~~~- 289 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAID--WNKVIFKGLTIKGIYGR- 289 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCccc--HHHHhhcceEEEEEEcc-
Confidence 76 6788888888776 9999999999888899999999996 9999998754322222 2222 235666655321
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEecC
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 378 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~~ 378 (379)
.....+..+++++.++ +.+.+.+.+.|+++++++|++.+.+++..|+|++|+
T Consensus 290 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 290 -EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred -CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 1123456788888888 544455789999999999999988877449999875
No 52
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.1e-42 Score=321.79 Aligned_cols=309 Identities=21% Similarity=0.229 Sum_probs=252.7
Q ss_pred ceeeeeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 016978 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
|||+++.+++.| +++.++|.|.|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 789999998854 788899999999999999999999999999998887643 35788999999999999999999
Q ss_pred C-cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEe
Q 016978 84 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (379)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ 162 (379)
+ +++||+|++.+. .+ |+|++|+.+|++.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999975321 01 3999999999999999
Q ss_pred cCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEE-c-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-G-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-G-ag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+|+++++++++.+++...|||.. ....+. ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888888899754 455555 56666665 4 59999999999999999 89999999999999999999
Q ss_pred ceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEE
Q 016978 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWK 318 (379)
Q Consensus 241 ~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~ 318 (379)
++++++++ .++.+.+++.+.+ ++|++||++|+.. ....+.+++++ |+++.+|.........++... +.+++++.
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 99998876 6788888888877 9999999999854 67789999996 999999875332211232222 23477887
Q ss_pred eeecCCCc---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 319 GTAFGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
++....+. ...++++++++++ +.++ +.++++|+|+|+++|++.+.+++.. |++|.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TELK--TTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Cccc--cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 77655432 2346777888887 6665 5688999999999999999998775 99874
No 53
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.4e-41 Score=317.34 Aligned_cols=333 Identities=30% Similarity=0.517 Sum_probs=278.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +++.++|.|++.+++|+|||.++++|+.|+....+..+...+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999998876 99999999999999999999999999999999888765556688999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|+..+..+|+.|..|+.++++.|..-.. ++.. . .|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVH-R------------------DGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeec-C------------------CCcceeEEEechh-eEECCCCCCH
Confidence 99998889999999999999999953221 2211 1 2499999999999 9999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++ ..+.++++++ ...++.+|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.++++++|+++++++.+
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 4677888876 77889999999999889999999999999999 8999988999999999999999998876
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCcc
Q 016978 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 327 (379)
.++.+.+.+.+++ ++|++|||.|+...+..++++++++ |+++.+|.... ...++...+.. ++++.+.. ...
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~---~~~ 285 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG--PVTFPDPEFHKKELTILGSR---NAT 285 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC--CCccCHHHHHhCCCEEEEec---cCC
Confidence 5688888888776 8999999998877899999999996 99999986542 22233222222 45555442 123
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC-ee-EEEEec
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-CL-RCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~-~~-Kvvi~~ 377 (379)
...+.++++++.++.+.+.+.+...|+++++++|++.+.+++ .. |+|+++
T Consensus 286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 357888999999999987444778999999999999999884 54 999875
No 54
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.7e-41 Score=318.06 Aligned_cols=334 Identities=28% Similarity=0.441 Sum_probs=277.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++.++++ +.+.+.|.|+| .+++|+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 78999998887 99999999986 8999999999999999999988876543 357899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.....|+.|.+|..+..+.|.+... +|.. ++| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999999986442 3322 444 99999999975 99999999
Q ss_pred CCccccc-----cccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 016978 167 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (379)
Q Consensus 167 ~~~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~ 241 (379)
++++.+. ++...+.+||+++ ..+++.+|++|+|.|+|++|++++|+|+++|+++++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9882222 1224678888876 567899999999998899999999999999996689998898899999999999
Q ss_pred eEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc-ceeeeccEEEe
Q 016978 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKG 319 (379)
Q Consensus 242 ~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~i~~ 319 (379)
+++++.. .++.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.... ...++. ..+.++.++.+
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence 9999876 6677888888777 8999999999878899999999996 99999987542 233333 22344677665
Q ss_pred eecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 320 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
.... ....++++++++.++++.+.+++.+.++++++++|++.+.+.+..|++|+
T Consensus 291 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 291 GPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred ecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 3221 23578889999999999876667899999999999999888776799986
No 55
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.9e-41 Score=317.64 Aligned_cols=335 Identities=30% Similarity=0.476 Sum_probs=279.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +.+.+.+.|++.+++|+||+.++++|+.|+..+.|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998886 99999999999999999999999999999998888664334577899999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcc-----eEecC
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 164 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~iP 164 (379)
+|++.++.+|+.|++|..++.++|...... |.. . .|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee---ccC-C------------------CCcceeeEEecccccccccEEECC
Confidence 999999999999999999999999876532 211 2 24999999999998 99999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++.+++.+ ..+.+||+++. ..++++|++|||+|+|.+|++++|+|+.+|++.|+++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998876 68889999874 45899999999998899999999999999994488888999999999999999998
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeec
Q 016978 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~ 322 (379)
++++ .++.+.+++.+.+ ++|+++||+++...+..++++++++ |+++.+|.........+.+..+. .+..+.+...
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 8876 6788888887777 8999999999877789999999996 99999986433222222222222 2455554432
Q ss_pred CCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
. ....++++++++.++.+.+.+.+..+|+++++.+|++.+.+++ . |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 293 A---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 2356888999999999876445678899999999999999988 6 99874
No 56
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.1e-41 Score=323.41 Aligned_cols=344 Identities=22% Similarity=0.292 Sum_probs=278.3
Q ss_pred Cccccceeeeeec--CCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC----------CCCCC-cccc
Q 016978 5 GQVITCKAAVAWE--PNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILG 68 (379)
Q Consensus 5 ~~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G 68 (379)
-.|.+|||+++.. +++| +.+.++|.|.+.+++|+||+.++++|++|++...+... ....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 3456899999955 5654 88999999999999999999999999999876655321 11123 2799
Q ss_pred cceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcce
Q 016978 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST 148 (379)
Q Consensus 69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (379)
||++|+|+++|++++.+++||+|++.+...|++|++|..++++.|..... +|....+ |+
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~------------------g~ 141 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF------------------GS 141 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC------------------cc
Confidence 99999999999999999999999999999999999999999999976542 3322122 49
Q ss_pred eeeeEEecCcceEecCCCCCccccccccccchhhhhhhhh--ccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 016978 149 FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 149 ~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
|++|+.++.+.++++|+++++++++.+.+.+.+||+++.. .+++.+|++|||+|+ |++|++++|+|+.+|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999998754 467899999999998 9999999999999999 77888
Q ss_pred cCChhHHHHHHhcCCceEeCCCCCC--------------------chHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHH
Q 016978 226 DIDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284 (379)
Q Consensus 226 ~~~~~~~~~~~~lg~~~v~~~~~~~--------------------~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~ 284 (379)
++++++.+.++++|+++++++++++ ..+.+.+.+.+++ ++|++|||+|. ..+..++++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHh
Confidence 8889999999999999999875421 1355667778876 89999999997 668999999
Q ss_pred hccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHH
Q 016978 285 CHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 363 (379)
Q Consensus 285 l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~ 363 (379)
++++ |+++.+|..... ...++...+ ..+.++.+..+.. ..++.++++++.++++.+ .+.++++++|+++|++
T Consensus 300 l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~ 372 (398)
T TIGR01751 300 CRRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQ 372 (398)
T ss_pred hccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHH
Confidence 9996 999999875431 122222222 2255566554432 245788999999998874 3779999999999999
Q ss_pred HHhcCCee-EEEEecC
Q 016978 364 YMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 364 ~~~~~~~~-Kvvi~~~ 378 (379)
.+.+++.. |+|+++.
T Consensus 373 ~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 373 DVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHcCCCCceEEEEeC
Confidence 99988876 9998763
No 57
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=5.4e-41 Score=313.59 Aligned_cols=316 Identities=26% Similarity=0.395 Sum_probs=262.9
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. ++++++|.|++.+++|+||+.++++|++|+....|..+ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 68999998765 99999999999999999999999999999998888654 5788999999999999997 67999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|...+..+|+.|.+|+.+.++.|.+... .+....+| +|++|+.++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------------~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG------------------AFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC------------------ceEEEEEechHHeEECcCCCCH
Confidence 99999999999999999999999998653 22211233 9999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++.+ ..+.++|. +.+..++++|++|||+|+|.+|++++|+|+.+|+ +|+++..++++.++++++|++.++++++
T Consensus 133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~- 208 (319)
T cd08242 133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA- 208 (319)
T ss_pred HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc-
Confidence 888764 34556666 4577889999999999989999999999999999 6999988999999999999988877643
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCcc
Q 016978 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 327 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 327 (379)
. +.+ ++|+++||+|+...+..++++++++ |+++..+.... ...++...+ .++.++.+...+
T Consensus 209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~---- 271 (319)
T cd08242 209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG---- 271 (319)
T ss_pred -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc----
Confidence 1 233 8999999999877789999999996 99998776432 223332222 236666665432
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~ 376 (379)
.++++++++.++++++.+++.+.|+++++++|++.+.++...|+||+
T Consensus 272 --~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 272 --PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred --cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 37889999999999766668899999999999999987775699986
No 58
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7.7e-41 Score=315.43 Aligned_cols=324 Identities=22% Similarity=0.369 Sum_probs=262.0
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-----------CCCCCcccccceeEEEEEe
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 78 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~v 78 (379)
|||+++.++ ++++++++.|++.+++|+||+.++++|+.|++...|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689999876 599999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCC-cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecC
Q 016978 79 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 79 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 157 (379)
|+++++ +++||+|++.+...|+.|..|..+..+ .. .|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------~~------------------~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------EA------------------PGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------CC------------------CCceeeeEEech
Confidence 999997 999999999999999999999432110 01 249999999999
Q ss_pred cceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 016978 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+.++++|+++++++++ ++.++++||++ ...+++++|++|||+|+|++|.+++|+|+.+|+..++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999877 55688899998 578899999999999889999999999999999668888889999999999
Q ss_pred cCCceEeCCCCCCc--hHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eee
Q 016978 238 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT 313 (379)
Q Consensus 238 lg~~~v~~~~~~~~--~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 313 (379)
+|++++++++.... .+. .+.+...+ ++|++||+.|+...+..++++++++ |+++.+|....... ..+.. +.+
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~ 280 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRK 280 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhc
Confidence 99998998765211 232 34444445 8999999999865788999999996 99999987532222 11111 223
Q ss_pred ccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 314 GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
+.++.+.... ..+++.+++++++++.+.+.+++.+.|+++++++|++.+.+++.. |+|++
T Consensus 281 ~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 281 ELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 5555543321 234788999999999998766778999999999999999988876 99874
No 59
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4e-41 Score=316.42 Aligned_cols=329 Identities=25% Similarity=0.397 Sum_probs=276.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.++++++.++++|.|.+.+++|+||+.++++|++|+....|..+..++|.++|||++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 78999999998899999999999999999999999999999998888766556788999999999999999998999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|.+|..++++.|..... +|.. .+| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEE-LDG------------------FFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccc-cCc------------------eeeeeeecchhceEECCCCCCH
Confidence 99999888999999999999999987653 3322 234 9999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
.+++.+++.+.+||+++... ++.++++|||+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++++ ++++++++
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987555 8999999999988 9999999999999999 889888999999999888 77666553
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--cccCcceeeeccEEEeeecCCCc
Q 016978 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPFQLVTGRVWKGTAFGGFK 326 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 326 (379)
++.+.+++. +++|+++||+|+ ..+..++++++++ |+++.+|....... ..+... +.+++++.+... .
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~ 283 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---A 283 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---C
Confidence 355556554 379999999998 4589999999996 99999997543222 222222 334677766532 2
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
.+.+++.+++++.++.++. .+.+.|+++|+++|++.+.+++.. |+++..
T Consensus 284 ~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 3467889999999998873 467899999999999999987765 998864
No 60
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.4e-40 Score=318.37 Aligned_cols=336 Identities=25% Similarity=0.393 Sum_probs=270.0
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC------C-CCCCCcccccceeEEEEEeCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~vG~~v 82 (379)
+.+.++..+ . ++++++|.|++.+++|+||+.++++|++|+..+.+.. + ..++|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 455555543 3 9999999999999999999999999999988776321 1 13568899999999999999999
Q ss_pred CCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEe
Q 016978 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ 162 (379)
+.+++||+|++.+..+|+.|..|..++++.|..... .|.. .+| +|++|+.++.+.+++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~g------------------~~~~~v~v~~~~~~~ 164 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-ADG------------------AFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CCC------------------cceeeEEechHHeEE
Confidence 999999999999999999999999999999996552 3322 234 999999999999999
Q ss_pred cCCCC-------Cccccccccccchhhhhhhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 016978 163 IDPQA-------PLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (379)
Q Consensus 163 iP~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~ 234 (379)
+|+++ +++ +++++.++++||+++... .++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++
T Consensus 165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~ 243 (384)
T cd08265 165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL 243 (384)
T ss_pred CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 99864 444 555666888999988666 689999999999889999999999999998779999889999999
Q ss_pred HHhcCCceEeCCCCC-CchHHHHHHHhcCC-CccEEEEcCCC-HHHHHHHHHHhccCCceEEEEccCCCCcccccCccee
Q 016978 235 AKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGN-VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL 311 (379)
Q Consensus 235 ~~~lg~~~v~~~~~~-~~~~~~~i~~~~~~-g~d~vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~ 311 (379)
++++|+++++++++. ..++...+++.+.+ ++|+|+|+.|+ ...+..++++++++ |+++.+|.... ..++.+..+
T Consensus 244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~ 320 (384)
T cd08265 244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVL 320 (384)
T ss_pred HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHH
Confidence 999999999887642 13677888888887 99999999987 34688999999996 99999986532 222222222
Q ss_pred -eeccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016978 312 -VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 375 (379)
Q Consensus 312 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi 375 (379)
....++.+.... .....+.++++++.++.+.+.+++.+.|+++++++|++.+.++...|+|+
T Consensus 321 ~~~~~~l~~~~~~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 321 QVRRAQIVGAQGH--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hhCceEEEEeecc--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 124455554321 12246889999999999987666788999999999999976665448875
No 61
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.7e-40 Score=312.63 Aligned_cols=333 Identities=26% Similarity=0.415 Sum_probs=273.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.+..++++|.|++.+++|+||+.++++|++|+..+.|..+. ..|.++|||++|+|+.+|++++.+++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 799999998885449999999999999999999999999999888876543 2367899999999999999999999999
Q ss_pred EEeecC-CcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
+|++.+ ..+|+.|++|..+..+.|.+... .|.. .+| +|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VDG------------------GMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-ccC------------------cceeEEEEchHHeEeCCCCCC
Confidence 998765 46899999999999999987653 3322 234 999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+.+++.+++.+.|||+++ ..+++++|++|||+|+|++|++++++|+. +|+ +|+++++++++++.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999986 77889999999999999999999999998 499 899999999999999999999988875
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCc
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 326 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 326 (379)
. ..++.+.+++..+ ++|.++++.++...+..++++++++ |+++.+|.... .++++...+. .+..+.++...
T Consensus 216 ~-~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (338)
T PRK09422 216 R-VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG--- 287 (338)
T ss_pred c-cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC---
Confidence 3 1346666776665 6896655556668899999999996 99999987532 2233322222 25555554432
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
...+++++++++.++.+.+ .+ ..++++++++|++.+.+++.. |+++.+.
T Consensus 288 ~~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 288 TRQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred CHHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 2357888999999998864 34 458999999999999988876 9998765
No 62
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.8e-40 Score=312.31 Aligned_cols=333 Identities=31% Similarity=0.475 Sum_probs=280.6
Q ss_pred ceeeeeecCCCC-eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 10 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~~~-~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||++++..++++ +.+.+.|.|.+.+++|+|++.++++|+.|+....|..+ ..++|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999998 67888889999999999999999999999999888765 2356788999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+..+|+.|.+|+.++.+.|..... .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965432 2222 23 399999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++.+++.++..+.+||+++....+++++++|||.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998888889999999999889999999999999999 799999999999999999999888776
Q ss_pred CCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCC
Q 016978 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 325 (379)
+ ..+.+.+ +...+ ++|+++||+|....+..++++++++ |+++.+|.... ...++...+.. +.++.++...
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 289 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG-- 289 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC--
Confidence 5 4555555 44455 8999999999877899999999996 99999987532 22233333333 5555554322
Q ss_pred cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
....+..+++++.++.+.+. .+.+++++++++++.+.+++.. |+|+++
T Consensus 290 -~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 -TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23578889999999998864 4789999999999999988876 999864
No 63
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-40 Score=313.01 Aligned_cols=331 Identities=31% Similarity=0.482 Sum_probs=269.2
Q ss_pred eeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCC-CCC--CCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPE--GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 12 a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~-~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|+++.++.. +.+++.|.|++.+++|+||+.++++|+.|+..+.+. ... ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 457788865 999999999999999999999999999998876422 111 1357789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|++|+.+.+++|.+.... +.... .|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPV------------------DGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccC------------------CCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999864321 10001 24999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++++.+ ..+.+|++++ +.+++++|++|||.|+|++|++++|+|+.+|+++|+++.+++++.++++++|+++++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998877 4778899885 8889999999999988999999999999999944899989999999999999999998876
Q ss_pred CCch---HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 016978 249 HDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 249 ~~~~---~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
.+ +.+.+.+.+.+ ++|++|||.|+...+..++++++++ |+++.+|..... ..++.... ..+..+.+....
T Consensus 217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC
Confidence 34 36777777776 8999999999866799999999996 999999864322 22221111 224555544322
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEE
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 375 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~--~Kvvi 375 (379)
...++++++++.++.+.+.+.+.++|+++++.+|++.+.+++. .|++|
T Consensus 292 ----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 ----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred ----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2578889999999987655557789999999999999998863 49998
No 64
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.5e-40 Score=310.94 Aligned_cols=335 Identities=30% Similarity=0.442 Sum_probs=271.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++++++..+.+.+.+.|+|.+++|+||+.++++|+.|+.++.+.. .....|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888779999999999999999999999999999988755432 1224567899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+.++|+.|.+|..+++++|.... ..|.. . .|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVD-T------------------DGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEecc-C------------------CCcceEEEEechHHcEECcCC
Confidence 9999999999999999999999999997532 22211 2 349999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++++.+ +++..+.++++++. ....+|++|||.|+|++|++++|+|+.+|+.+|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 45557778887654 356789999999889999999999999998668888888999999999999998887
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
+. .++. .+++..++ ++|++|||+|+.+.+..++++++++ |+++.+|.......+.+....++.+..+.+....
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR-- 289 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--
Confidence 65 5666 77777776 9999999999878889999999996 9999998754322222221122335556554321
Q ss_pred cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.....+.++++++.++.+.+.+.+...++++++++|++.+.+++ . |+|++
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 12345778999999999886666778899999999999999888 6 99986
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2e-40 Score=312.12 Aligned_cols=334 Identities=28% Similarity=0.401 Sum_probs=274.5
Q ss_pred eeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCE
Q 016978 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (379)
|++..++.+..+.+++++.|++.+++|+||+.++++|++|+..+.|.....++|.++|||++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 46777777766999999999999999999999999999999999887755567899999999999999999999999999
Q ss_pred Ee-ecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 91 VI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 91 V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
|+ ......|++|.+|.++..+.|....... +| +........|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--------~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-------NG--------KYPDGTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-------cc--------cccCCCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 4456789999999999999998765320 00 00001122459999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++.+.+...+||+++.. .++++|++|+|.|+|++|++++++|+.+|+ +++++++++++.+.++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 9999999999999998644 568999999998889999999999999999 8999999999999999999999887654
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCccc
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 328 (379)
.++.. . ..+++|++|||+|....+.+++++++++ |+++.+|...... .+++..+ .++.++.+..... .
T Consensus 223 -~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 223 -PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred -hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 33322 1 1348999999999865689999999996 9999998754322 3344442 3478888776542 3
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.++..+++++.++++.+ . .+.|+++++++||+.+.+++.. |+|++
T Consensus 292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 57889999999998864 3 4789999999999999999876 98874
No 66
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.4e-40 Score=310.48 Aligned_cols=336 Identities=29% Similarity=0.473 Sum_probs=276.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++++.++ +.+++.+.|++.+++|+||+.++++|+.|+....+.+ ....|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 78999999876 9999999999999999999999999999998887765 224578899999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+...|+.|++|..+.+..|++... +|.. .+ |+|++|+.+|.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSR-RD------------------GAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eecc-cC------------------CcccceEEechHHeEECcCCCCH
Confidence 99999988999999999999999988643 2321 23 49999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++ ..+.+||+++. ..+++++++|||+|+|.+|++++|+|+.+|+++++++.+++++.+.++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 57789999874 778999999999988999999999999999944999988899999999999999998876
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcc-e-eeeccEEEeeecCCC-
Q 016978 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-Q-LVTGRVWKGTAFGGF- 325 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~-~~~~~~i~~~~~~~~- 325 (379)
.. ...+++...+ ++|++|||.|+...+..++++++++ |+++.+|.......+....+ . +.++.++.+......
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 44 6667777766 8999999998877889999999996 99999997543211111111 1 133666666654321
Q ss_pred -cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhc-CCee-EEEE
Q 016978 326 -KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG-GDCL-RCVL 375 (379)
Q Consensus 326 -~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~-~~~~-Kvvi 375 (379)
.....+++++++++++++.+.+.+...+++++++++++.+.+ ++.. |+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 123567889999999998754456788999999999999998 5544 8874
No 67
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-40 Score=311.18 Aligned_cols=316 Identities=19% Similarity=0.267 Sum_probs=250.1
Q ss_pred ccccceeeeeec-CCC-C----eEEEE---eeCCC-CCCCeEEEEEeeeeccccccccccCCCCCCCCCccccc--ceeE
Q 016978 6 QVITCKAAVAWE-PNK-P----LVIED---VQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAG 73 (379)
Q Consensus 6 ~~~~~~a~~~~~-~~~-~----~~~~~---~~~p~-~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G 73 (379)
++.+.|++++.+ +.+ | |.+.+ ++.|. +++||||||+.|+++|+.|+..+.+.......|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 445568888844 322 2 77776 46663 48999999999999999987644332222245889998 8899
Q ss_pred EEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeE
Q 016978 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 153 (379)
Q Consensus 74 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 153 (379)
+|..+|++++.+++||+|+.. |+|+||+
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999621 2899999
Q ss_pred EecCcc--eEe--cCCCCCcc-ccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 016978 154 VVHDVS--VAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 154 ~v~~~~--~~~--iP~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
.++.+. +++ +|++++++ +|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 998753 544 59999986 688899999999999888889999999999988 9999999999999999 8999989
Q ss_pred ChhHHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCc-cc-
Q 016978 228 DPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ-EI- 304 (379)
Q Consensus 228 ~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~-~~- 304 (379)
++++++.++ ++|+++++++++ ..++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~ 268 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSAS 268 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCC
Confidence 999999987 799999998864 1367777877776689999999998 5789999999996 9999999754321 00
Q ss_pred --ccCccee-eeccEEEeeecCCCc--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 305 --STRPFQL-VTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 305 --~~~~~~~-~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
.+++..+ .+++++.+++.+.+. ..+.++++++++++|++++. +.++|+|+|+++|++.+++++.. |+||+++
T Consensus 269 ~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 269 QGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred CCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 1122222 237778877654321 22457789999999999853 67789999999999999999887 9999985
Q ss_pred C
Q 016978 379 D 379 (379)
Q Consensus 379 ~ 379 (379)
+
T Consensus 347 ~ 347 (348)
T PLN03154 347 K 347 (348)
T ss_pred C
Confidence 3
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.2e-39 Score=307.41 Aligned_cols=334 Identities=32% Similarity=0.497 Sum_probs=280.2
Q ss_pred ceeeeeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
|||+++.+++ ..+.+++++.|.+.+++|+||+.++++|++|..++.|..+. .+.|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899999887 23999999999999999999999999999999988876643 245678999999999999999999999
Q ss_pred CCEEeecC-CcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 88 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
||+|++.+ ..+|+.|.+|+.+..+.|.+... .|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-VD------------------GTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-cC------------------CcceeEEEeccccEEECCCC
Confidence 99999876 57899999999999999987643 2221 23 49999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58999999999988 7799999999999999 8999999999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 323 (379)
+.+ .++...+.+.+++ ++|++||+.++...+..++++++++ |+++.+|.... ...+++...+. ++.++.+....
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC
Confidence 876 5777888888766 8999999888778899999999996 99999987542 22234333322 36666654332
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
...+++++++++.++++.+ .+ ..|+++++++|++.+.+++.. |+|++|
T Consensus 293 ---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 ---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2367889999999999864 23 679999999999999988876 999875
No 69
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9e-40 Score=306.70 Aligned_cols=329 Identities=34% Similarity=0.545 Sum_probs=273.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++..+++++.++++|.|.+.+++|+|++.++++|++|+..+.|..+....|.++|||++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999988666699999999999999999999999999999999988776666788999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+...|+.|.+|..+..+.|.+.. .+|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEE-VD------------------GGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccc-cC------------------CeeeeEEEechhheEECCCCCCH
Confidence 9999998999999999999999998752 24422 23 49999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
++++.+++++.+||+++.. +++.++++|||+|+ |++|++++++++..|+ +|+++.+++++.+.++++|.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998766 88999999999988 9999999999999999 7888888889999999899887775432
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcc-eeeeccEEEeeecCCCcc
Q 016978 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~ 327 (379)
+.+.+.+.. ++|++++++|... ...++++++++ |+++.+|....... .+... ..+++..+.+... ..
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSIS---AT 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecC---CC
Confidence 555555543 7999999999844 88999999996 99999987543211 11111 1123455544421 23
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
..+++++++++.++.+.+ .+.++|+++++++|++.+.+++.. |+|++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 457888999999998774 367899999999999999988876 88874
No 70
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=4.5e-41 Score=308.09 Aligned_cols=269 Identities=26% Similarity=0.411 Sum_probs=221.1
Q ss_pred ccccceeEEEEEeCCCCC------CcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCc
Q 016978 66 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139 (379)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~ 139 (379)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.++++.|.+... +|.....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 589999999999999999 89999999999999999999999999999997653 22210000
Q ss_pred ccccCCcceeeeeEEecCc-ceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 016978 140 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 218 (379)
Q Consensus 140 ~~~~~~~g~~~~~~~v~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g 218 (379)
.....|+|+||+.+|++ .++++|+++++++++.+++.+.|+|+++ +.....+|++|||+|+|++|++++|+|+.+|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012499999999997 7999999999999999998999999986 4456679999999999999999999999999
Q ss_pred CCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 219 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 219 ~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+++|++++.+++|+++++++|+++++++.+ ..+.+++.+.+ ++|++||++|.+..++.++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999989999999999999999887643 24556667666 8999999999988899999999996 99999997
Q ss_pred CCCCcccccCcceeee-ccEEEeeecCCCcccccHHHHHHHHHc--CCCCCCCceeeeeecchH
Q 016978 298 AASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK--KEIKVDEYVTHNMTLGEI 358 (379)
Q Consensus 298 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~i~~~~~~~~i 358 (379)
.......++++..++. ++++.++... ...+++++++++.+ +++++.++++++||++|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 5432344555555544 8888887543 23679999999998 467777889999999874
No 71
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=5.3e-40 Score=307.34 Aligned_cols=309 Identities=23% Similarity=0.298 Sum_probs=258.3
Q ss_pred ceeeeeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCc
Q 016978 10 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
|||+++.+++.| +.++++|.|.+.++||+|||.++++|+.|+..+.|..+ ....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999888764 78899999999999999999999999999999888765 23568899999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC
Q 016978 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
++||+|++.+. + |+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------H------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------C------------------CcceeEEEEchHHeEECCC
Confidence 99999975421 2 3999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++++++.+++.+.++|+++ ..+++++|++|||+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999988889999976 5688999999999987 9999999999999999 788888888888888889999998
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeec
Q 016978 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~ 322 (379)
++++ .++.+.+.+.+.+ ++|++|||+|+ ..+..++++++++ |+++.+|... ....++++... .++.++.++..
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 8866 6788889998887 99999999998 4588999999996 9999998752 22233332222 34777777665
Q ss_pred CCCc-------ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 323 GGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 323 ~~~~-------~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.... ....+..+++++.++.+.+. +.+.|+++|+++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 4321 12357789999999998854 46889999999999999877665 88874
No 72
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.3e-39 Score=306.78 Aligned_cols=331 Identities=27% Similarity=0.413 Sum_probs=264.1
Q ss_pred eeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecccccccccc-CCCCC--CCCCcccccceeEEEEEeCCCCCCcCCCCE
Q 016978 14 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (379)
Q Consensus 14 ~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (379)
++++.+. +.+++.+.|.+.+++|+||+.++++|++|+..+. +..+. ...|.++|+|++|+|+++|++++.+++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4667776 9999999999999999999999999999987763 33211 135778999999999999999999999999
Q ss_pred EeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCcc
Q 016978 91 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (379)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~ 170 (379)
|++.+...|+.|.+|..+..+.|..... +|...++ ....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999997532 2211000 0113499999999999999999999999
Q ss_pred ccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 016978 171 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 171 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
+|+. ..++++||+++...... +|++|||.|+|.+|++++|+|+.+|+++++++++++++.++++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 8876 46788899987665556 9999999988999999999999999867899988999999999999999998765
Q ss_pred chHHHHHHHhc-C-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCCCcc
Q 016978 251 KPIQQVLVDLT-D-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 251 ~~~~~~i~~~~-~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 327 (379)
.++ .+.. . +++|+++|+.|....+..++++++++ |+++.+|.... ....++.. +.+++++.+... .
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 288 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG--PVPLPLNALVAKELDLRGSFR----F 288 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccCcHHHHhhcceEEEEEec----C
Confidence 232 2222 2 26999999999767799999999996 99999986432 22222222 223556655432 2
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
...++++++++.++.+.+.+.+.++|+++++++|++.+.+++.. |+|+++
T Consensus 289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 289 DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 34688899999999988766678999999999999999887765 999874
No 73
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.2e-39 Score=280.80 Aligned_cols=320 Identities=23% Similarity=0.312 Sum_probs=259.3
Q ss_pred CCCCccccceeeeeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEE
Q 016978 2 STEGQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVES 77 (379)
Q Consensus 2 ~~~~~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~ 77 (379)
|++..+...|+++|.+.|+| +++++.++|....++|+||.+|+.|||+|+..+.|.+|.. ++|.+-|.|++|.|+.
T Consensus 12 sa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~ 91 (354)
T KOG0025|consen 12 SASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVA 91 (354)
T ss_pred cccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEE
Confidence 34566678899999999998 8899999998888889999999999999999999999887 7899999999999999
Q ss_pred eCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecC
Q 016978 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 157 (379)
+|+++++|++||+|...+. +.|+|++|.+.++
T Consensus 92 vGs~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e 123 (354)
T KOG0025|consen 92 VGSNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSE 123 (354)
T ss_pred ecCCcCccCCCCeEeecCC------------------------------------------------CCccceeeEeecc
Confidence 9999999999999975432 2459999999999
Q ss_pred cceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----H
Q 016978 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----F 232 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~----~ 232 (379)
+.+++++++++++.||++..+..|||..|.+..++.+||+|+-.|| +++|++.+|+|+++|+ +.|.+.++... .
T Consensus 124 ~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~ 202 (354)
T KOG0025|consen 124 SDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELK 202 (354)
T ss_pred cceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHH
Confidence 9999999999999999999999999999999999999999999998 9999999999999999 55555565543 4
Q ss_pred HHHHhcCCceEeCCCCC-CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce
Q 016978 233 DRAKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ 310 (379)
Q Consensus 233 ~~~~~lg~~~v~~~~~~-~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~ 310 (379)
+.++.+||++|+...+. +.+... ..... .+.+.|||+|+.. ..++.+.|.++ |+.+.||..+ ..++.++...
T Consensus 203 ~~Lk~lGA~~ViTeeel~~~~~~k---~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMS-kqPv~~~ts~ 276 (354)
T KOG0025|consen 203 KQLKSLGATEVITEEELRDRKMKK---FKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMS-KQPVTVPTSL 276 (354)
T ss_pred HHHHHcCCceEecHHHhcchhhhh---hhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCcc-CCCcccccch
Confidence 55667999999865442 111111 11123 7899999999955 77888999997 9999999864 4555555544
Q ss_pred e-eeccEEEeeecCCCcccc--------cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEecC
Q 016978 311 L-VTGRVWKGTAFGGFKSRS--------QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQ 378 (379)
Q Consensus 311 ~-~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~--~Kvvi~~~ 378 (379)
+ +++++++|+|+..|.... ...++.+++..|+|...+ ....+|+|...|++...+... .|-+|.++
T Consensus 277 lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 277 LIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred heeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 4 449999999998874322 245678888999998653 366799999999886544333 26666654
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.7e-39 Score=302.35 Aligned_cols=331 Identities=30% Similarity=0.477 Sum_probs=273.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +.+.+.+.|++.+++|+||+.++++|+.|+....|..+.. +|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~-~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC-CCcccccceEEEEEEeCCCCCCCCCCC
Confidence 78999998886 9999999999999999999999999999999888876533 678999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+...|+.|.+|..++++.|..... .|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-CC------------------CcceeEEEecHHHcEECcCCCCH
Confidence 99999999999999999999999987642 2211 22 49999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
.+++.+ ..+.++++++ +.+++++|++|||+|+|.+|.+++++|+.+|+++|+++++++++.+.++++|++.++++++
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998766 6778899887 7889999999999988999999999999999944888989999999999999988888765
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCccc
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 328 (379)
.++... +....+++|++|||.|....+..++++++++ |+++.+|........++.+..+. .+.++.+... ..
T Consensus 214 -~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 286 (334)
T cd08234 214 -EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI----NP 286 (334)
T ss_pred -CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc----CH
Confidence 344444 3333338999999998777899999999996 99999987543223344433333 2555555432 22
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
..++++++++.++++.+.+.+..+|+++++++|++.+.+ +.. |+|+
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 468889999999998866667889999999999999998 554 8886
No 75
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=7.5e-39 Score=301.76 Aligned_cols=332 Identities=27% Similarity=0.399 Sum_probs=268.4
Q ss_pred ecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCcCCCCEEe
Q 016978 16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92 (379)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (379)
++++.++++++.|.|+|.++||+||+.++++|+.|+..+.+.. ...++|.++|+|++|+|+++|++++.+++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 5788889999999999999999999999999999998765542 1224577899999999999999999999999999
Q ss_pred ecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCcccc
Q 016978 93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172 (379)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 172 (379)
+.+...|+.|..|..+..+.|..... +|.. .. |+|++|+.++++.++++|++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVD-TD------------------GCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---Eeec-CC------------------CcceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999998643 2221 22 49999999999999999999998655
Q ss_pred ccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCch
Q 016978 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252 (379)
Q Consensus 173 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~ 252 (379)
+++..+.+|++++ .....+|++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~ 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--ED 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cC
Confidence 4566788888875 345779999999888999999999999999944888888899999999999988888765 67
Q ss_pred HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcccccH
Q 016978 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQV 331 (379)
Q Consensus 253 ~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 331 (379)
+.+.+.+...+ ++|++|||.|+...+...+++++++ |+++.+|.......+++....+..+.++.+... ....+.+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhH
Confidence 88888887776 8999999999877899999999996 999999875322222211111222455554431 1222457
Q ss_pred HHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 016978 332 PWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 332 ~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~Kvvi~~ 377 (379)
.+++++++++++++.+.+.+.++++++.++++.+.+++..|+|++|
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 7899999999998655578999999999999999877655999875
No 76
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.3e-39 Score=304.94 Aligned_cols=311 Identities=23% Similarity=0.281 Sum_probs=246.1
Q ss_pred cceeeeeecCCC-CeEEEEeeC----CCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccce--eEEEEEeCC
Q 016978 9 TCKAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESVGE 80 (379)
Q Consensus 9 ~~~a~~~~~~~~-~~~~~~~~~----p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~vG~ 80 (379)
-+|++....+.. .+.+++.+. |+|+++||||||.|++||+.|+..+.|..+. ...|.++|++. .|++..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 356666544443 289999887 7899999999999999999999988885433 24578899754 456666888
Q ss_pred CCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecC-cc
Q 016978 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VS 159 (379)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~ 159 (379)
.++.+++||+|+.. |+|+||+.+|+ ..
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999621 28999999999 79
Q ss_pred eEecC-CCCCcc-ccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 016978 160 VAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 160 ~~~iP-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
++++| +++++. +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678876 788899999999999878889999999999998 9999999999999999 7999889999999999
Q ss_pred h-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCccc----ccCccee
Q 016978 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQL 311 (379)
Q Consensus 237 ~-lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~~ 311 (379)
+ +|+++++++.+ ..++.+.+++.+.+++|++||++|+ ..+..++++++++ |+++.+|........ ..+...+
T Consensus 194 ~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~ 270 (338)
T cd08295 194 NKLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI 270 (338)
T ss_pred HhcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence 8 99999998654 1367777777765699999999998 6699999999996 999999864321110 0111122
Q ss_pred -eeccEEEeeecCCCcc--cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 312 -VTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 312 -~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
++++++.++....... ...+.++++++.++++++. +...|+++++++|++.+++++.. |+|+++
T Consensus 271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 2356666654433211 2346778999999998864 45669999999999999988876 999874
No 77
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=8.3e-39 Score=300.93 Aligned_cols=335 Identities=26% Similarity=0.395 Sum_probs=276.4
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++...+.+ +.+.+.+.|.+.+++|+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 689999854433 778888888889999999999999999999988876542 25578899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|.+++++.|.+... +|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-VD------------------GGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-cC------------------cceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999997532 3322 22 38999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++++.+||+++.+..++.++++|||+|+ +.+|++++++++..|+ +++.+++++++.+.++.++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999899999998888888999999999988 7999999999999999 7888889999999998888887776
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc-ceeeeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 323 (379)
..+ .++.+.+.+.+.+ ++|++++++|. ..+..++++++++ |+++.+|..... ...... ..+..+.++.+....
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 654 5666777776665 89999999998 5588999999996 999999865432 222222 122336666655433
Q ss_pred CCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
....+.++++++.++.+.+ ++.+.|+++++++|++.+.+++.. |+|++.
T Consensus 293 ---~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 ---TKAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ---CHHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2346888999999998774 367889999999999999887765 998863
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=4.8e-39 Score=301.15 Aligned_cols=320 Identities=28% Similarity=0.380 Sum_probs=258.2
Q ss_pred ceeeeeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++..++ +.+.+.+.+.|++++++|+||+.++++|++|+..+.+ .....+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899988776 3488888888889999999999999999999888764 2222457789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+...|+.|.+|+.+..+.|.+... +|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-SN------------------GGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-CC------------------CceeeEEEcCHHHceeCCCCCC
Confidence 999999999999999999999999997543 2321 22 4999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+++++.+++++.+||+++.. +++++|++|+|+|+ |++|++++++|+.+|+ +|+++. +.+.++++|++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 99999999999999998754 88999999999998 9999999999999999 787774 23777889998888764
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCc
Q 016978 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 326 (379)
+ ..+.+++.+ +++|+++|++|+ ..+..++++++++ |+++.+|... .....++...+.. +.++.+...+
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 280 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG--- 280 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC---
Confidence 3 345566666 689999999998 5799999999996 9999998742 1223333333332 4555555433
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EE
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RC 373 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kv 373 (379)
.+++++++++++...+ . .+.+.|+++|+++|++.+.+++.. |+
T Consensus 281 ~~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 281 TRKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred CHHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 2357888888885433 2 356889999999999998877654 54
No 79
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=6.8e-39 Score=302.63 Aligned_cols=299 Identities=19% Similarity=0.263 Sum_probs=231.5
Q ss_pred eEEEEeeCCCC-CCCeEEEEEeeeecccccccccc---CCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCc
Q 016978 22 LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWS---GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (379)
Q Consensus 22 ~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (379)
+++.+.|.|+| +++||||||.|+|||+.|+.... +.....++|.++|||++|+|+++|++++.+++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 88999999987 49999999999999999853322 2111235678999999999999999999999999997420
Q ss_pred CCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccc----cc
Q 016978 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 173 (379)
Q Consensus 98 ~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~----aa 173 (379)
++|+||+.++++.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 2799999999999999999865443 44
Q ss_pred cccccchhhhhhhhhccCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCC
Q 016978 174 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 249 (379)
Q Consensus 174 ~l~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~ 249 (379)
+++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|+++++++++
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5667889999998788888877 99999988 9999999999999998679999899999999876 99999998876
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC-ccccc----Cc--ceeee--ccEEEee
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEIST----RP--FQLVT--GRVWKGT 320 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~----~~--~~~~~--~~~i~~~ 320 (379)
.++.+.+++.+++++|++||++|+. .+..++++++++ |+++.+|..... ..... .+ ..+.. +.+....
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 6788888888766999999999985 479999999996 999999853210 11111 00 01111 2222222
Q ss_pred ecCCCc--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 321 AFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 321 ~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
...... ....++++++++.++++++. ....++++++++|++.+.+++.. |+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 111111 12346678889999998865 34557999999999999988876 999875
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.3e-38 Score=297.11 Aligned_cols=323 Identities=28% Similarity=0.383 Sum_probs=267.6
Q ss_pred ceeeeeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCc
Q 016978 10 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
||++++.+++. ++.+.+.+.|.+.+++|+||+.++++|++|+..+.|..+...+|.++|||++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998884 48888888888999999999999999999999988876655678899999999999999999999
Q ss_pred CCCCEEeecC-CcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 86 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 86 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
++||+|++.+ ..+|+.|.+|..+.+++|..... +|.. .+ |+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-VD------------------GGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-cC------------------CceEEEEEecchhEEECC
Confidence 9999998754 36899999999999999997764 2322 23 399999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++.+++.+++.+.+||+++ +.++++++++|||+|+|++|++++++|+..|+ +|+++.+++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88999999999999999999999999999998 899998999999999999998887
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCC
Q 016978 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 324 (379)
+... . ..+++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.+....
T Consensus 217 ~~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCC-
Confidence 7654 1 1237999999877778899999999996 99999885321 1111222222235555554322
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
....+.++++++.++.+.+ +.+.|+++++++|++.+.+++.. |+|+
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2346788899999998875 25889999999999999988776 8764
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.7e-38 Score=297.84 Aligned_cols=304 Identities=19% Similarity=0.217 Sum_probs=243.1
Q ss_pred cceeeeeec-C-CCC----eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 016978 9 TCKAAVAWE-P-NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 9 ~~~a~~~~~-~-~~~----~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 82 (379)
+||++++.+ + +.+ +++.+.|.|+|+++||+|||.+++||+.|.....+ ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 589999988 3 443 88999999999999999999999999987653221 124688999999999995 44
Q ss_pred CCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc---c
Q 016978 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 159 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~ 159 (379)
+.+++||+|+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999631 178999999999 9
Q ss_pred eEecCCCCCc-----cccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 016978 160 VAKIDPQAPL-----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (379)
Q Consensus 160 ~~~iP~~~~~-----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~ 233 (379)
++++|+++++ ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999982 2234677899999999888889999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--c---ccCc
Q 016978 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--I---STRP 308 (379)
Q Consensus 234 ~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~---~~~~ 308 (379)
+++++|+++++++++ .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... . ....
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 999999999999876 678888888776689999999998 6689999999996 99999985422111 0 1111
Q ss_pred c-eeeeccEEEeeecCCCc--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 309 F-QLVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 309 ~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
. .+.+++++.++....+. ....++++++++.++++++. ...+|+++++++|++.+.+++.. |+|+++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1 12336667665543321 12346678899999998865 34568999999999999998876 999874
No 82
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3.1e-38 Score=296.33 Aligned_cols=327 Identities=31% Similarity=0.477 Sum_probs=268.7
Q ss_pred eeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCE
Q 016978 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (379)
||+++.++|..+.+++.|.|.+.+++|+|++.++++|++|+..+.|..+...+|.++|||++|+|+.+|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68889988666999999999999999999999999999999998887655567889999999999999999999999999
Q ss_pred EeecCC-cCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCc
Q 016978 91 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 91 V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~ 169 (379)
|++.+. ..|+.|.+|++++.++|.+.... +.. .. |+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-TQ------------------GGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-cC------------------CccccEEEEcHHHeEECCCCCCH
Confidence 987654 67999999999999999986642 211 22 49999999999999999999999
Q ss_pred cccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 016978 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
.+++.+++...+||+++.. .++.++++|||+|+|.+|++++++|+.+|+ +|+++.+++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999998899999998754 789999999999988899999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCccc
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 328 (379)
...... ..+++|+++|+.++...+..++++++++ |+++.+|..... ...+....+.. +.++.++..+. .
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 222222 2247999999988778899999999996 999999865322 11111222222 55555554432 2
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
..++++++++.++.+.+ ..+.|+++++++|++.+.+++.. |+|+
T Consensus 286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 46788889999998874 34789999999999999988876 7764
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-38 Score=299.69 Aligned_cols=323 Identities=25% Similarity=0.285 Sum_probs=257.1
Q ss_pred ceeeeeecCCCC--eEEEE-eeCCCCCCCeEEEEEeeeeccccccccccCCCC--------------------CCCCCcc
Q 016978 10 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 66 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 66 (379)
||++++.+++.+ +.+.+ ++.|.+.+++|+|||.++++|++|+..+.|..+ ..++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888877754 55654 577788999999999999999999988877543 2356889
Q ss_pred cccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCc
Q 016978 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (379)
Q Consensus 67 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 146 (379)
+|||++|+|+++|++++.+++||+|++.+...|+.|..|.. |.. +|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCC-CC------------------
Confidence 99999999999999999999999999988888887765421 110 1111 12
Q ss_pred ceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 016978 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 147 g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
|+|++|+.++.+.++++|+++++.+++.+++++.+||+++ ...++++|++|||+|+ |++|++++++|+.+|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 4999999999999999999999999999999999999986 7788999999999998 9999999999999999 68888
Q ss_pred cCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCccc
Q 016978 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304 (379)
Q Consensus 226 ~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 304 (379)
..++ +++.++++|++.+++... ..+.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ...
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-ccc
Confidence 6655 888889999976665443 33333 445555 89999999998 5689999999996 99999986422 223
Q ss_pred ccCcce-eeeccEEEeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 305 STRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 305 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
.++... +.++.++.++... ....+.++++++.++++.+ ++.+.|+++++++|++.+.+++.. |+|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLG---TREVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cCCHHHhhhcceEEEEeecC---CHHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 334333 2347777766543 2357888999999998874 367889999999999999887766 998863
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.8e-38 Score=297.27 Aligned_cols=291 Identities=20% Similarity=0.250 Sum_probs=233.8
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCC
Q 016978 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRE 101 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 101 (379)
+++.+.|.|+|++|||||||.|+++|+.|+. |.++....|.++|.|++|+|+++|+ .+++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8899999999999999999999999997654 3332233478999999999999874 69999999732
Q ss_pred CccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEec----CCCCCcccc-cccc
Q 016978 102 CKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLG 176 (379)
Q Consensus 102 ~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i----P~~~~~~~a-a~l~ 176 (379)
++|++|+.++.+.+.++ |+++++++| ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16899999999988888 899999987 6788
Q ss_pred ccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHH
Q 016978 177 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255 (379)
Q Consensus 177 ~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~ 255 (379)
+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++++. ..+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHH
Confidence 899999999888899999999999986 9999999999999999 89999899999999999999999988651 24556
Q ss_pred HHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---ccccc--Ccce-eeeccEEEeeecCCCc---
Q 016978 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---QEIST--RPFQ-LVTGRVWKGTAFGGFK--- 326 (379)
Q Consensus 256 ~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---~~~~~--~~~~-~~~~~~i~~~~~~~~~--- 326 (379)
.++..+++++|++||++|+. .+..++++++++ |+++.+|..... ...+. .+.. ++.++++.++....+.
T Consensus 199 ~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 66666555899999999984 579999999996 999999864321 11111 1111 2235666665543221
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
....++++++++.++++++. +...|+++++++|++.+.+++.. |+|++
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 12467889999999999865 45678999999999999988876 99874
No 85
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=5.6e-38 Score=294.19 Aligned_cols=314 Identities=23% Similarity=0.264 Sum_probs=255.0
Q ss_pred cceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
+||++++.+++.+ +.+++++.|.+.+++|+||+.++++|++|+....|.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999998875 88999999999999999999999999999998888776555788999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999974211 1 138999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++++++.+++.+.+||.++.+.+++++|++|+|+|+ |.+|++++|+|+.+|+ +++++++++++++.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999888889999998877788999999999976 9999999999999999 7899989999999999999999988
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-------ccEE
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-------GRVW 317 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-------~~~i 317 (379)
.+. .++.+.+++.+++ ++|++|||+|+ ..+...+++++++ |+++.+|..... ...+....+.. ...+
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEeccee
Confidence 765 6788888888887 99999999998 5688899999996 999999875421 11111111101 1111
Q ss_pred EeeecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.+...........+..+++++.++.+.+..++.+.|+++++++|++.+.+++.. |+||+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111100000011245678899999988655557889999999999999988876 99986
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1e-37 Score=294.07 Aligned_cols=312 Identities=23% Similarity=0.315 Sum_probs=254.6
Q ss_pred ceeeeeecCCCC---eEEEEeeCCCCCC-CeEEEEEeeeeccccccccccCCCCCC-C----CCcccccceeEEEEEeCC
Q 016978 10 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 80 (379)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~~VlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~vG~ 80 (379)
|||+++.+++.| +.+++.|.|+|.+ ++|+||+.++++|+.|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 799999999876 8999999998887 999999999999999999888865432 2 577899999999999999
Q ss_pred CCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcce
Q 016978 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (379)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~ 160 (379)
++..+++||+|++... . .|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------~------------------~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------G------------------LGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------C------------------CccchheEeccHHHe
Confidence 9999999999985421 1 139999999999999
Q ss_pred EecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHH
Q 016978 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 235 (379)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~----~~~~~~ 235 (379)
+++|+++++++++.+++.+.+||+++.....+++|++|||+|+ |++|++++|+|+++|+ +++++.+++ ++++.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999987 9999999999999999 677776655 678888
Q ss_pred HhcCCceEeCCCCCCc---hHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-e
Q 016978 236 KNFGVTEFVNPKDHDK---PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-L 311 (379)
Q Consensus 236 ~~lg~~~v~~~~~~~~---~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~ 311 (379)
+++|++++++++. . ++...++...++++|++|||+|+. .+...+++++++ |+++.+|..... ...+++.. +
T Consensus 192 ~~~g~~~~~~~~~--~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~ 266 (341)
T cd08290 192 KALGADHVLTEEE--LRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLI 266 (341)
T ss_pred HhcCCCEEEeCcc--cccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHh
Confidence 9999999988765 3 677777776655899999999985 477789999996 999999864322 22333322 3
Q ss_pred eeccEEEeeecCCCc-------ccccHHHHHHHHHcCCCCCCCceeeee---ecchHHHHHHHHhcCCee-EEEEec
Q 016978 312 VTGRVWKGTAFGGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 312 ~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~i~~~~---~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
.++.++.+....... ....+.++++++.++.+.+. ....+ +++++++|++.+.+++.. |+|++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 267 FKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 347777776643321 01247778899999988754 34556 999999999999888776 999875
No 87
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.7e-37 Score=286.75 Aligned_cols=300 Identities=28% Similarity=0.471 Sum_probs=250.3
Q ss_pred ceeeeeecCCC-CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPNK-PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++++.+. .+++++++.|++.+++|+||+.++++|++|+....|.......|.++|+|++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 57888887553 49999999999999999999999999999998888865434457899999999999999999999999
Q ss_pred CEEeecCC-cCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 89 d~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
|+|++.+. ..|+.|++|..+..+.|.... ++|.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQ-AD------------------GGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeec-CC------------------CceEEEEEcchHHeEECcCCC
Confidence 99998874 789999999999999998642 23321 22 499999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhHHHHHHhcCCceEeC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v--~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++ ++....+||+++...+++++|++|||.|+|.+|++++|+|+.+|+ +|+++ .+++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999998888899999999998889999999999999999 67776 335568889999999888 7
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 323 (379)
+.. .++...+.+...+ ++|++||+.|+...+...+++++++ |+++.+|... .....++...++ +++++.|++++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence 765 6788888887766 8999999998777899999999996 9999999864 223344433343 48899998876
Q ss_pred CCcccccHHHHHHHHHcC
Q 016978 324 GFKSRSQVPWLVDKYMKK 341 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~ 341 (379)
+ +++++++++++++|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 4 36799999988764
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3e-37 Score=290.32 Aligned_cols=308 Identities=19% Similarity=0.254 Sum_probs=245.2
Q ss_pred eeeeeecC---CCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCc
Q 016978 11 KAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 11 ~a~~~~~~---~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
||+++.++ +.+ +++.++|.|+|.++||+|||.++++|+.|..++.+..+...+|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888886 554 8888999999999999999999999999998888765545678899999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC
Q 016978 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
++||+|+.... .. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~---------------------------~~-~~------------------g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD---------------------------ID-RP------------------GSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC---------------------------CC-CC------------------CcccceEEEcHHHcccCCC
Confidence 99999974310 00 12 3999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhc
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~a~~la~~~-g~~~vi~v~~~~~~~~~~~~l 238 (379)
++++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999878888877 999999987 99999999999998 99 899998999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEE
Q 016978 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i 317 (379)
|++++++++. ++.+.+++...+++|+++|++++...+...+++++++ |+++.++... .++ ...+.. +.++
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~~~--~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA---ELD--ISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc---ccc--chhhhhcceEE
Confidence 9999987643 5666777754448999999987767899999999996 9999885421 122 222221 2333
Q ss_pred EeeecC--C-C--c----ccccHHHHHHHHHcCCCCCCCceeeee---ecchHHHHHHHHhcCCee-EEEEe
Q 016978 318 KGTAFG--G-F--K----SRSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 318 ~~~~~~--~-~--~----~~~~~~~~~~~~~~~~i~~~~~i~~~~---~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.+..+. . . . ....++++++++.++.+++. +.+.+ +++++++|++.+.+++.. |+|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 332211 0 0 0 01346789999999988743 33445 468999999999988876 88875
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.9e-36 Score=283.31 Aligned_cols=312 Identities=23% Similarity=0.265 Sum_probs=254.5
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
|||+++++++.+ +.+.+.+.|.+.+++|+|++.++++|+.|+....|..+. ...|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999887654 667777777789999999999999999999888775432 345788999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
+++||+|++... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------~~~------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------RAG------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------CCC------------------ceeeEEEEEchHHeEeCC
Confidence 999999986421 012 399999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
+++++.+++.+++.+.+|| ++...++++++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4677888999999999986 9999999999999999 89999899999999999999888
Q ss_pred eCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeee
Q 016978 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTA 321 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~ 321 (379)
+++.+ .++.+.+.+.+++ ++|+++|++|+.. ...++++++++ |+++.+|...... ..++... +.++.++.+..
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 88765 6677788887776 8999999999854 68999999996 9999998754322 2333222 23366666655
Q ss_pred cCCCc---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 322 FGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
..... ..+.+.+.++++.++++.. .+...|+++++++|++.+.+++.. |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 43221 1235677888898998764 367889999999999999988876 999864
No 90
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.6e-36 Score=285.64 Aligned_cols=315 Identities=24% Similarity=0.303 Sum_probs=249.4
Q ss_pred ceeeeeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++ +.+++++++.|+++++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 7899999995 238899999999999999999999999999998876654 22357789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.....|+ + .+ .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~------------~--------~~---~~------------------g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP------------N--------DP---RN------------------GAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC------------C--------CC---CC------------------CcccceEEechhheEECCCCCC
Confidence 999876543221 0 00 22 4999999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+++++.+++.+.+||+++.+..++ .++++|||+|+ |++|++++++|+.+|+ +|+++. ++++++.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987666544 78999999998 9999999999999999 788776 5688999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhcc--CCceEEEEccCCCCcccccCcceeeecc
Q 016978 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK--GWGTSVIVGVAASGQEISTRPFQLVTGR 315 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 315 (379)
+|+++++++.+ .++.+.+++.+.+++|++||++|++..+..+++++++ + |+++.+|...... .. +.. ....
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~-~~~-~~~~ 269 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP-RKG-VKVK 269 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC-CCC-ceEE
Confidence 99999998866 6777888877766899999999986779999999999 8 9999998754321 11 111 1111
Q ss_pred EEEeeecC------CCcccccHHHHHHHHHcCCCCCCCceeeeee--cchHHHHHHHHhcCC-ee-EEEEec
Q 016978 316 VWKGTAFG------GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMT--LGEINEAFRYMHGGD-CL-RCVLKM 377 (379)
Q Consensus 316 ~i~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~--~~~i~~A~~~~~~~~-~~-Kvvi~~ 377 (379)
.+...... .......+..+++++.++++.+.+ ...++ ++|+++|++.+.+++ .. |+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11111111 011123466788899999888653 35567 999999999999888 65 999874
No 91
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.1e-36 Score=285.66 Aligned_cols=311 Identities=23% Similarity=0.289 Sum_probs=252.4
Q ss_pred cceeeeeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 016978 9 TCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 9 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
+|||+++.+++. ++.+++.+.|.+.+++|+||+.++++|+.|+....|..+. ..+|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 589999999877 3899999999999999999999999999999988876543 35788999999999999999999
Q ss_pred CcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEec
Q 016978 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i 163 (379)
.+++||+|++.. . |+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------~------------------g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------F------------------GAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------C------------------cceeEEEEechHHeEEC
Confidence 999999997531 1 38999999999999999
Q ss_pred CCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 016978 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
|++ +.+++.+++++.+||+++.+..++++|++|||+|+ |.+|++++|+|+..|+ +|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677788899999999877788999999999987 9999999999999999 7899889999999999999988
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCc---------ccccCcceeee
Q 016978 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ---------EISTRPFQLVT 313 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~---------~~~~~~~~~~~ 313 (379)
+++.++ .++.+.+.....+++|++||++|+ ..+..++++++++ |+++.+|...... ...+....+.+
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 887665 556666666554589999999997 6789999999996 9999998753210 01122222333
Q ss_pred ccEEEeeecCCCc--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 314 GRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 314 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
+.++.++...... ....+.++++++.++.+.+.....+.|+++++++|++.+.+++.. |+|++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 6666666543221 124567788899999887643345668999999999999988776 98874
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-36 Score=283.57 Aligned_cols=313 Identities=22% Similarity=0.280 Sum_probs=254.7
Q ss_pred cceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCc
Q 016978 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
||||+++.+++.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....|..+. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999998864 777788888889999999999999999999888776532 2456789999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC
Q 016978 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
++||+|+... .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------PG------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------CC------------------CceeeEEEecHHHcEeCCC
Confidence 9999997431 11 3999999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++.+++.+++++.+||+++....++++|++|||+|+ |++|++++++|+.+|+ +++.+.+++++.+.++++|+++++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999877788999999999987 9999999999999999 667788999999999999998888
Q ss_pred CCCCCCch-HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccc-cCcceeee-ccEEEee
Q 016978 245 NPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGT 320 (379)
Q Consensus 245 ~~~~~~~~-~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~~~~-~~~i~~~ 320 (379)
++.. .+ +.+.+++.+++ ++|++||+.++ ..+..++++++++ |+++.+|.... .... ++...++. ..++.++
T Consensus 191 ~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T PTZ00354 191 RYPD--EEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFS 265 (334)
T ss_pred ecCC--hhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEee
Confidence 8765 33 77778888766 99999999987 6789999999996 99999986432 2211 33333233 4466665
Q ss_pred ecCCCcc--c-----ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 321 AFGGFKS--R-----SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 321 ~~~~~~~--~-----~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
....... . ..++++++++.++.+.+ .+.+.+++++++++++.+.+++.. |+|+.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 266 TLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred eccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 5433111 0 12466778888888774 367889999999999999987765 9999875
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=5.1e-36 Score=280.48 Aligned_cols=313 Identities=22% Similarity=0.274 Sum_probs=243.0
Q ss_pred ceeeeeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.++++ ++++++.|.|.+.+++|+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999986 59999999999999999999999999999999988875432 45788999999999999 456899
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+. .+|.. .+ |+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~-~~------------------g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMN-TD------------------GGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCC-CC------------------ceeEEEEEEchhhEEECCCC
Confidence 9999986421 01111 22 49999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhcc--CCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTA--KVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
+++++++.+++.+.+||.++.... ++. .+++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999998875443 335 3579999998 9999999999999999 7999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeee
Q 016978 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 321 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~ 321 (379)
+++..+ . .....+....+++|++||+.|+ ..+..++++++++ |+++.+|..... ...+.+..+ .++.++.+..
T Consensus 195 ~~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 195 VLDRED--L-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGID 268 (325)
T ss_pred EEcchh--H-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEE
Confidence 887654 2 1122222333389999999998 5699999999996 999999975432 223444444 3477777765
Q ss_pred cCCCcc---cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 322 FGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~~---~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
...... ...++.+.+++..+... .+..+|+++|+++|++.+.+++.. |+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 269 SVNCPMELRKQVWQKLATEWKPDLLE---IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eecCchhHHHHHHHHHHHHHhcCCcc---ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 443211 11233344444455222 367899999999999999988876 999864
No 94
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.6e-37 Score=283.27 Aligned_cols=301 Identities=28% Similarity=0.411 Sum_probs=230.5
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCC----CCcccccceeEEEE---EeC-CCCCCcCCCCEEee
Q 016978 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL----FPCILGHEAAGIVE---SVG-EGVTEVQPGDHVIP 93 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~----~p~~~G~e~~G~V~---~vG-~~v~~~~~Gd~V~~ 93 (379)
....+.++|.|.+++++|++.++++|+.|+.++.|.+.... +|.++++++.|++. ..| ..+..+..||.++.
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 45578899999999999999999999999999999876553 67555555555533 334 22334555555532
Q ss_pred cCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccc
Q 016978 94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173 (379)
Q Consensus 94 ~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa 173 (379)
. ...|+|+||+.+|...++++|+++++.+||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 1 123499999999999999999999999999
Q ss_pred cccccchhhhhhhhhcc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 174 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 174 ~l~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.++.|||.+++... ++++|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 9999999999977 9999999999999996 45555599999999999999999999
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC---CCcccccCcceeeeccE-----EE
Q 016978 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA---SGQEISTRPFQLVTGRV-----WK 318 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~---~~~~~~~~~~~~~~~~~-----i~ 318 (379)
++ .++.+.+++.+.++||+||||+|+. .......++... |+...++... .+.... ..+..+..+. +.
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 284 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLK 284 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccc-cchhhhhhhhheeeeee
Confidence 98 8999999999844999999999995 477777778885 7655554432 111111 0000001101 11
Q ss_pred e---eecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecCC
Q 016978 319 G---TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 379 (379)
Q Consensus 319 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~~ 379 (379)
+ .+.......+.++.+.+++++++++ +.+++.||++++.+|++.+.+++.. |+++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~ie~gkik--p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 285 GVNYRWLYFVPSAEYLKALVELIEKGKIK--PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred ccceeeeeecCCHHHHHHHHHHHHcCccc--CCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 1 1111123456788899999999777 5589999999999999999987765 99998763
No 95
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-36 Score=280.14 Aligned_cols=330 Identities=25% Similarity=0.380 Sum_probs=265.8
Q ss_pred ceeeeeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++...+. .+.+.+.+.|.+++++|+|++.++++|++|+....|..+.. ..|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 78999987653 38888888888899999999999999999999888765432 4678899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.....|+.+.+| .|.... ++|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~---~~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPT------AEDEAS---ALGGP-ID------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEeccccccccccc------cccccc---ccccc-cC------------------ceeeeEEEecHHHeEECCCC
Confidence 9999998776666544333 332211 12211 23 49999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+++.+++.+.+||+++...+++++|++|+|+|+|++|++++++|+.+|+ +|++++.++++++.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998777889999999999889999999999999999 79999899999999999999998876
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 324 (379)
+. ..++.+.+++.+++ ++|+++|+.+. ..+..++++++++ |+++.+|....... ...... +.++.++.+.....
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RT-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEA-PVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred Cc-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCcc-CcCHHHHhhcceEEEEEecCc
Confidence 53 14577778888876 99999999986 6689999999996 99999987543211 222222 23477777766543
Q ss_pred CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
...++++++++.++.+.+. ....|++++++++++.+.+++.. |+++++
T Consensus 288 ---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 ---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred ---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3578888899988877643 46889999999999999988776 988863
No 96
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.2e-35 Score=277.63 Aligned_cols=298 Identities=19% Similarity=0.286 Sum_probs=248.4
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCC
Q 016978 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 100 (379)
+.+++.|.|++.+++|+||+.++++|+.|...+.+.... ...|.++|||++|+|+.+|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999888776543 246789999999999999999999999999985421
Q ss_pred CCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccch
Q 016978 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180 (379)
Q Consensus 101 ~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 180 (379)
+ |+|++|+.++.+.++++|+++++.+++.+++...
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 2 3899999999999999999999999999988999
Q ss_pred hhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHH
Q 016978 181 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259 (379)
Q Consensus 181 ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~ 259 (379)
+||+++.....+.+|++|||+|+ |++|++++++|+.+|+ +++++.+++++++.++++|+++++++++ .++...+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99999878788899999999988 9999999999999999 7888888899999999999999998876 567888888
Q ss_pred hcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCcc-------ccc
Q 016978 260 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQ 330 (379)
Q Consensus 260 ~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-------~~~ 330 (379)
.+++ ++|++|||.|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.+.....+.. ...
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8877 9999999999954 67889999996 999999875433 3344444444 467777665543311 134
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 331 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 331 ~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
+.++++++.++.+.+. +.+.|+++++++|++.+.+++.. |+|++
T Consensus 279 ~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 279 FAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 6778888889988753 57889999999999999988766 88864
No 97
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.1e-35 Score=275.45 Aligned_cols=311 Identities=25% Similarity=0.397 Sum_probs=248.7
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||++++.+.+.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 688888877653 67778888888999999999999999999998888765556688999999999999995 57999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.... +|.. .+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGRT-FD------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCCC-CC------------------cccceEEEcCHHHcEeCCCCC
Confidence 9999865320 1100 22 399999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++++++.+++++.+||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999888888999999999988 9999999999999999 79999899999999999999888754
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCccc----ccCcceeeeccEEEeeec
Q 016978 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQLVTGRVWKGTAF 322 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~~~~~~~i~~~~~ 322 (379)
. .++.+.+++. .+++|+++|++|+ ..+..++++++++ |+++.+|........ ......+.+++++.+...
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 3 4666777777 4499999999998 6699999999996 999999874322111 111111123555555443
Q ss_pred CCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
... ....+..+++++.++.+.+. ....|+++|+++|++.+.+++.. |+|+
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDV-PQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-hHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 221 12357788899999988753 56889999999999999888766 8775
No 98
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-35 Score=273.55 Aligned_cols=297 Identities=21% Similarity=0.237 Sum_probs=240.9
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||++++.+.+ | +++.+.|.|.+.+++|+||+.++++|+.|+....+. ..|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 6888888755 4 667788999999999999999999999998876521 23568999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------AM------------------GAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------CC------------------cceeeEEEEchHHeEECCCCC
Confidence 99997431 12 399999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++.+++++++.+.+||+++...... +|++|+|+|+ |++|++++++|+.+|+ +|+.+.+++++.+.++++|++.++..
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999987555544 6999999988 9999999999999999 89999899999999999998765543
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee---ccEEEeeecC
Q 016978 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFG 323 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~---~~~i~~~~~~ 323 (379)
.+ +..++++|+++|++|+. .+..++++++.+ |+++.+|... .....+++..+.. +.++.++.+.
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 12234799999999984 689999999996 9999998754 2223333333333 6677766654
Q ss_pred C-CcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 G-FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~-~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
. ......+..+++++.++++.+. +.+.++++++++|++.+.+++.. |+|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 3 1123467888999999999854 67889999999999999988876 999865
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.5e-35 Score=272.51 Aligned_cols=302 Identities=24% Similarity=0.306 Sum_probs=241.9
Q ss_pred ecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccc-cCCCCC--CCCCcccccceeEEEEEeCCCCCCcCCCCEEe
Q 016978 16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92 (379)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (379)
+++++ +++.+++.|++.+++|+||+.++++|+.|+..+ .|..+. ...|.++|+|++|+|+.+|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34555 999999999999999999999999999999887 665322 12477899999999999999999999999998
Q ss_pred ecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCcccc
Q 016978 93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172 (379)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 172 (379)
+.. .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 542 1389999999999999999998 233
Q ss_pred ccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCch
Q 016978 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252 (379)
Q Consensus 173 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~ 252 (379)
+.+..+++++++++. .+++++|++|||+|+|.+|++++|+|+.+|+++|+++.+++++.++++++|++++++.+. .+
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~ 185 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EA 185 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cC
Confidence 322257788888764 788999999999988999999999999999944999988999999999999998888655 67
Q ss_pred HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCCC-cccc
Q 016978 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGF-KSRS 329 (379)
Q Consensus 253 ~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~ 329 (379)
+.+.+.+.+++ ++|+++||+|....+..++++++++ |+++.+|... .....+++.. .+.+..+.+...... ....
T Consensus 186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (312)
T cd08269 186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE 263 (312)
T ss_pred HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence 88888888877 9999999998877899999999996 9999998653 2222333222 122555544432221 1235
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEE
Q 016978 330 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 375 (379)
Q Consensus 330 ~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~--~Kvvi 375 (379)
.++++++++.++.+.+.+.+.+.|+++++++|++.+.+++. .|+++
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 264 GMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 78889999999998865556788999999999999998865 49887
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.1e-34 Score=271.39 Aligned_cols=311 Identities=23% Similarity=0.272 Sum_probs=240.9
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||+++.+.+.| ++++++|.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+. +++..+++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 67888887775 789999999999999999999999999999988886533 25688899999999998 55678999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+.. .|.. .+ |+|++|+.+|.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-HD------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-CC------------------ccceEEEEEchhheEECCCCC
Confidence 9999865310 1110 22 399999999999999999999
Q ss_pred Cccccccccccchhhhhhhh--hccCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 016978 168 PLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
++++++.+++.+.+|+.++. ..+.+.+|+ +|||+|+ |++|++++++|+.+|+ +++++.+++++++.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 99999999988889887753 334488898 9999998 9999999999999999 78877788888899999999888
Q ss_pred eCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeec
Q 016978 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 322 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~ 322 (379)
++..+ .+. .++....+++|+++||+|+. .+..++++++++ |+++.+|.... ...+.+...+ ..+.++.+...
T Consensus 195 ~~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred Ecccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 87654 222 44455555799999999984 689999999996 99999997532 2233322333 34677776553
Q ss_pred CCCcc---cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 323 GGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 323 ~~~~~---~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
..... ...+..+.+++..+.+.. . .+.|+++++++|++.+.+++.. |+|+.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 32111 112445556666776653 2 4689999999999999988876 998863
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=9.5e-35 Score=272.12 Aligned_cols=314 Identities=19% Similarity=0.248 Sum_probs=238.4
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC-CCCCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.+++++ +.+++.|.|.+.+++|+||+.++++|++|.....+.. ....+|.++|||++|+|+++| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999988874 8889999999999999999999999999987654321 122458899999999999964 46799
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+.. .|.. .+ |+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 99999865320 1111 23 39999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhc--cC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNT--AK-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~--~~-~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
+++++++.+++.+.|||.++... .. ...+++|||+|+ |.+|++++|+|+.+|+ +|+++.+++++++.++++|+++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998876432 23 334789999998 9999999999999999 8999989999999999999988
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeee
Q 016978 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 321 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~ 321 (379)
+++.++ . ..+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|.... ...++.+..+ .++.++.+..
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence 888765 2 3455556654489999999998 6689999999996 99999997532 2233333333 3477777764
Q ss_pred cCCCcccccHHHHHHHHHcCCCCC---CCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 322 FGGFKSRSQVPWLVDKYMKKEIKV---DEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~i~~---~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
..... .....++++.+.. .+.+ ...+.++|+++++++|++.+.+++.. |+|+++
T Consensus 269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 32110 0122333333332 2221 12357899999999999999988876 999864
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=9.5e-35 Score=273.28 Aligned_cols=312 Identities=19% Similarity=0.200 Sum_probs=249.6
Q ss_pred ceeeeeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 016978 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
|||+++.+++.+ +...++|.|++.+++|+||+.++++|++|+..+.+..+..++|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999998874 555678888889999999999999999999888776654456778999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
+++||+|+..... . .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~-------------------------~---~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDI-------------------------T---RP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCC-------------------------C---CC------------------ccceEEEEEchHHeeeCC
Confidence 9999999753110 0 22 399999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~ 237 (379)
+++++++++.+++.+.+||+++.+.+++.+ |++|+|+|+ |++|++++|+|+.+| + +|++++.++++.+.+++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998878788887 999999986 999999999999999 7 89999899999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccE
Q 016978 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRV 316 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~ 316 (379)
+|++++++... ++.+.++....+++|++||++|....+..++++++++ |+++.+|... ..++...+ .++.+
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccce
Confidence 99998887653 4555565443348999999999767899999999996 9999998642 22233333 24566
Q ss_pred EEeeecCCC---c------ccccHHHHHHHHHcCCCCCCCc-eeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 317 WKGTAFGGF---K------SRSQVPWLVDKYMKKEIKVDEY-VTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 317 i~~~~~~~~---~------~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
+.+..+... . ....+.++++++.++.+.+... ....++++++++|++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 655443221 0 0123677889999998885311 12457999999999999988876 88874
No 103
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.6e-35 Score=275.90 Aligned_cols=311 Identities=23% Similarity=0.273 Sum_probs=240.5
Q ss_pred ceeeeeecCCCC---eEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCC---------------CCCCCcccccc
Q 016978 10 CKAAVAWEPNKP---LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 70 (379)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 70 (379)
|||+++.++++| +.++|++.|+| .+++|+||+.++++|++|+....|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999888886 88999999999 499999999999999999998877421 23568899999
Q ss_pred eeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceee
Q 016978 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (379)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 150 (379)
++|+|+.+|++++++++||+|++.+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999864321 1124999
Q ss_pred eeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 016978 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 151 ~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
+|+.++.+.++++|+++++.+++.+++.+.+||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998877776654 999999986 9999999999999999 78877
Q ss_pred cCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--
Q 016978 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-- 303 (379)
Q Consensus 226 ~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-- 303 (379)
.++ ++.+.++++|++.+++..+ .++.+.+... +++|++||++|.. ....++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCccccccc
Confidence 654 6788889999988887765 4555544432 3899999999985 689999999996 99999986432111
Q ss_pred ccc--Ccc----eeee-ccE-E-Eee---ecCCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee
Q 016978 304 IST--RPF----QLVT-GRV-W-KGT---AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 371 (379)
Q Consensus 304 ~~~--~~~----~~~~-~~~-i-~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~ 371 (379)
... .++ .+.. ... + ... +.........+.++++++.++.+.+ .+.+.|+++++++|++.+.+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~ 344 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHAR 344 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCc
Confidence 111 000 0000 000 0 000 0000112346888999999998764 367889999999999999887765
Q ss_pred -EEEEe
Q 016978 372 -RCVLK 376 (379)
Q Consensus 372 -Kvvi~ 376 (379)
|++++
T Consensus 345 ~~vv~~ 350 (350)
T cd08248 345 GKTVIK 350 (350)
T ss_pred eEEEeC
Confidence 88864
No 104
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=7.7e-34 Score=268.90 Aligned_cols=317 Identities=19% Similarity=0.228 Sum_probs=236.6
Q ss_pred eeeeeecCCCCeEEEEeeCCCC---CCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCC-Cc
Q 016978 11 KAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT-EV 85 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~---~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~-~~ 85 (379)
|++++.+++.|+++++++.|.| ++++|+||+.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6889999998888888887766 89999999999999999988765432222 2377899999999999999998 89
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc----ceE
Q 016978 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SVA 161 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~ 161 (379)
++||+|++.....|+ . .|+|++|+.++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~~--------------------------~------------------~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPYG--------------------------G------------------QGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCCC--------------------------C------------------CceeeEEEEEccccccceeE
Confidence 999999865321110 1 2499999999987 799
Q ss_pred ecCCCCCccccccccccchhhhhhhhhcc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhc
Q 016978 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~l 238 (379)
++|+++++.+++.+++++.+||+++.+.. ++++|++|||+|+ |++|++++|+|+.+|. ++++++. ++++++.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999988 8999999999999854 3677774 45556688899
Q ss_pred CCceEeCCCCCCch---HHHH-HHHhcCC-CccEEEEcCCCHHHHHHHHHHhc---cCCceEEEEccCCCCc--ccc---
Q 016978 239 GVTEFVNPKDHDKP---IQQV-LVDLTDG-GVDYSFECIGNVSVMRAALECCH---KGWGTSVIVGVAASGQ--EIS--- 305 (379)
Q Consensus 239 g~~~v~~~~~~~~~---~~~~-i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~---~~~G~iv~~g~~~~~~--~~~--- 305 (379)
|++++++.++ .+ +... ++..+++ ++|++|||.|+...+..++++++ ++ |+++.++...... ...
T Consensus 197 g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~ 273 (352)
T cd08247 197 GADHFIDYDA--HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNS 273 (352)
T ss_pred CCCEEEecCC--CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhh
Confidence 9999988765 33 3333 4444424 89999999998777889999999 96 9999874221110 000
Q ss_pred -----cCcceeeeccEEEeeec---CCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 306 -----TRPFQLVTGRVWKGTAF---GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 306 -----~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.....+....++....+ ........+.++++++.++.+.+ .+.+.|+++++++|++.+.+++.. |+|++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 00111111111111100 00011235777889999998764 367889999999999999988876 99886
Q ss_pred c
Q 016978 377 M 377 (379)
Q Consensus 377 ~ 377 (379)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 3
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=2.6e-33 Score=262.17 Aligned_cols=312 Identities=18% Similarity=0.239 Sum_probs=242.5
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.++|.+ +.++++|.|+|.+++|+||+.++++|++|.....|..+. ..+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 789999988853 889999999999999999999999999999888776432 23577899999999999 7778899
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.... .|. +..|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VGE-------------------RHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CCC-------------------CCCCcceeEEEEchHHeeeCCCC
Confidence 99999864210 000 01249999999999999999999
Q ss_pred CCccccccccccchhhhhhhh--hccCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 016978 167 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
+++++++.+++.+++++.++. +..+.. +|++|||+|+ |++|++++|+|+.+|+ +++++.+++++.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999988888876643 223445 6789999998 9999999999999999 7888889999999999999999
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeee
Q 016978 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 321 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~ 321 (379)
++++++ ....++..+.+++|.++|++++ ..+..++..++.+ |+++.+|.... ....+++..+ .++.++.+..
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 988754 2224555555578999999998 4577888888986 99999987532 2222333333 4477777764
Q ss_pred cCCCc---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 322 FGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
..... ....+..+++++.++.+.+ +.+.++++|+++|++.+.+++.. |+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 33221 1123555666777787753 36889999999999999988876 998864
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.9e-33 Score=261.98 Aligned_cols=309 Identities=24% Similarity=0.320 Sum_probs=251.8
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.+.+.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....+..+. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999886654 777888888889999999999999999999888776533 24678999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL-------------------------------AG------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec-------------------------------CC------------------CceeEEEEcCHHHhccCCCC
Confidence 999997531 11 38999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.++..+.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +++++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 7999989999999999999988887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
... .++.+.+.+.+.+ ++|+++|+.|+.. +...+.+++++ |+++.+|..... ...+....+ .++.++.++...
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeecc
Confidence 765 5677777777766 8999999999844 88899999996 999999865322 123333333 347777776654
Q ss_pred CCcc-------cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 324 GFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 324 ~~~~-------~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
.... ...+.++++++.++++.+ ...+.|+++++++|++.+.+++.. |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 3211 112456777888888764 367889999999999999887765 7764
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2e-33 Score=262.09 Aligned_cols=315 Identities=23% Similarity=0.336 Sum_probs=251.8
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++..++.+ +.+.++|.|.+.+++|+|++.++++|++|+....|..+. ...|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888877654 778899999999999999999999999999888776542 35788999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++..+.. ++ .. |++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~~-----------------------~~---~~------------------g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLGW-----------------------GR---RQ------------------GTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEecccc-----------------------CC---CC------------------cceeeEEEecHHHcEeCCCC
Confidence 999998764200 00 12 38999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++++.+||+++....++.+|++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877789999999999987 9999999999999999 8999989999999999999988887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 323 (379)
... .++.+.+.+.+.+ ++|+++|+++.. .....+++++++ |+++.+|.... ...+++.. +..+.++.+....
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGGL--RGTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecCC--cCCCChhHHHhcCceEEeeehh
Confidence 765 5677777777666 899999999984 478889999996 99999987532 22222222 2235555544322
Q ss_pred CCc---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 GFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
... ....+..+.+++.++.+.+. ....|++++++++++.+.+++.. |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 270 TATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 211 11234455667777777643 56889999999999999987776 988763
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.6e-33 Score=259.71 Aligned_cols=308 Identities=27% Similarity=0.358 Sum_probs=248.9
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCC
Q 016978 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||+.+..++.+ +.+.+.+.|.+.+++|+|++.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46677666654 667777777788999999999999999999888776543 457789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCC
Q 016978 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.. .. |+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------PP------------------GAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------CC------------------CceeEEEEecHHHceeCCCCCC
Confidence 9997531 01 3899999999999999999999
Q ss_pred ccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 016978 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+.+++.+++...++++++.+..++.+|++|||+|+ |++|++++++|+.+|+ +|++++.++++.+.++++|++++++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999888899999998877888999999999996 9999999999999999 899998999999999999998888776
Q ss_pred CCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCC
Q 016978 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 325 (379)
+ .++.+.+.+.+.+ ++|+++||.++ ..+..++++++++ |+++.+|..... ...+++..+ .++.++.+......
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 5 6777788888776 89999999998 5689999999996 999999875322 122222222 23555544332221
Q ss_pred c-c----cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 326 K-S----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 326 ~-~----~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
. . ...+.++++++.++.+.+. ..+.|+++++++|++.+.+++.. |+|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 1 1 1234567888888887754 56789999999999999988776 88875
No 109
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3.1e-33 Score=243.66 Aligned_cols=298 Identities=24% Similarity=0.299 Sum_probs=239.6
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeC--CCCCCcCCCCEEeecCCcCC
Q 016978 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAEC 99 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~ 99 (379)
+.++|+++|+|++|+||||..|.++.|....-++ ..+..--|+-+|...+|.++... |+.+.|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~-d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS-DAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeeccc-CCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 9999999999999999999999999984332222 22222346677776666555443 567889999999632
Q ss_pred CCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccc--cccc
Q 016978 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC--LLGC 177 (379)
Q Consensus 100 ~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa--~l~~ 177 (379)
.+|++|..++.+.+.|++++.-+..+. .+..
T Consensus 101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 189999999999999998775444433 3667
Q ss_pred cchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCchHHH
Q 016978 178 GVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQ 255 (379)
Q Consensus 178 ~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~ 255 (379)
+..|||.+|++.+++++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.|.++||+. +++.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~ 210 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQ 210 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHH
Confidence 89999999999999999999999987 9999999999999999 99999999999999998 99999999998 79999
Q ss_pred HHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC--CcccccCcce---eee-ccEEEeeecCC-Cc--
Q 016978 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS--GQEISTRPFQ---LVT-GRVWKGTAFGG-FK-- 326 (379)
Q Consensus 256 ~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~~~~~~~~~---~~~-~~~i~~~~~~~-~~-- 326 (379)
.+.+..+.|+|+.||++|+ +.+...+..|+.. +|++.+|..+. +...+..+.. ++. .+++.|+.... +.
T Consensus 211 ~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~ 288 (340)
T COG2130 211 ALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR 288 (340)
T ss_pred HHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence 9999998899999999999 6699999999995 99999997642 1112222221 222 67788877632 21
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecCC
Q 016978 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 379 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~~ 379 (379)
..+-.+++..++++|+|+..+ +-+-.||.+++||.-|.+++.. |.|+++.+
T Consensus 289 ~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 289 FPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 224577899999999999875 3334799999999999999987 99999864
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.2e-33 Score=260.33 Aligned_cols=311 Identities=23% Similarity=0.320 Sum_probs=250.4
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.+++.+ +.+.+.+.|.+.+++|+|++.++++|++|+....+.... ...|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 789999988876 778888888889999999999999999999887776432 23577899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|+..... ++ .. .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~------------------------~~--~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAGG------------------------LG--GL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccCC------------------------cC--CC------------------CCceeEEEEecHHHcccCCCC
Confidence 99999864310 00 01 248999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++.+.+||+++.+..++.+|++|+|+|+ |++|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999899999998878889999999999986 9999999999999999 78888777 8889999999988887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 324 (379)
... . +.+.+.+.+.+ ++|+++|++++ ..+..+++++++. |+++.+|... ........ .++.++.+.....
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~~-~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA---THDLAPLS-FRNATYSGVFTLL 265 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC---ccchhhHh-hhcceEEEEEccc
Confidence 755 4 77788888877 89999999998 4588899999996 9999998653 11211111 2355555544321
Q ss_pred --C------cccccHHHHHHHHHcCCCCCCCcee-eeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 325 --F------KSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 --~------~~~~~~~~~~~~~~~~~i~~~~~i~-~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
. .....+..+++++.++.+... ++ +.|++++++++++.+.+++.. |+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 1 012356778888888887643 34 889999999999999887766 998864
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.6e-33 Score=258.75 Aligned_cols=314 Identities=23% Similarity=0.304 Sum_probs=247.6
Q ss_pred ceeeeeecCC--CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
|||+++.+++ +.+.++++|.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999999 34999999999999999999999999999999887776543344778999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+.. + .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~-------------------------~---~~------------------~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL-------------------------A---RG------------------GSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC-------------------------C---CC------------------ccceeEEEeCHHHeEECCCCC
Confidence 9999864320 0 12 389999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++.+++.+++.+.+|++++.+.+++.+|++|+|+|+ |++|++++++|+..|+ +++.+. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999888888999999999998 8999999999999999 777775 6778888899999888877
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc-cccCcceeeeccEEEeeecCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 324 (379)
.. .++.+.+.+...+ ++|++++++++.. ....++++++. |+++.+|....... ..+.....+..+.+.......
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHG 268 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEeccccccc
Confidence 65 5677777877776 8999999999854 67789999996 99999875432111 011100111133332222111
Q ss_pred C-----cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 325 F-----KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 ~-----~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
. ...+.+.++++++.++.+.+. ..+.|+++++.+|++.+.+++.. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 269 DPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred chhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 1 111235678888888887643 45789999999999999988766 988863
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.4e-33 Score=259.81 Aligned_cols=305 Identities=25% Similarity=0.324 Sum_probs=239.9
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCcCC
Q 016978 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||+++...+.+ +.+.+++.|.|.+++|+|++.++++|+.|+..+.|..+.. .+|.++|||++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888888765 8888999999999999999999999999999888765432 56889999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|++... + |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------V------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------C------------------cceeeEEEechHHeEECCCCC
Confidence 999975421 1 389999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++.+++.+++++.+||+++.+.+++.+|++|+|+|+ |++|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999877788999999999987 9999999999999999 7888877 88899999999754 444
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--cccCcc-----------eeee
Q 016978 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPF-----------QLVT 313 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~-----------~~~~ 313 (379)
.. .++... +...+++|+++||+|+.. +..++++++++ |+++.+|....... +.+.+. ....
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 33 333333 233348999999999865 88999999996 99999987543222 111110 1111
Q ss_pred --ccEEEeeecCCC----cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 314 --GRVWKGTAFGGF----KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 314 --~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
..+......... .....+.++++++.++.+.+ .+.+.|+++++++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 222222221100 11245778889999998874 367889999999999998887765 8775
No 113
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=3e-33 Score=254.47 Aligned_cols=268 Identities=32% Similarity=0.471 Sum_probs=218.7
Q ss_pred eEEEEEeeeeccccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCC
Q 016978 36 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (379)
Q Consensus 36 ~VlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 114 (379)
||+|++.++++|+.|+..+.|..+ ....|.++|+|++|+|+++|++++.+++||+|++.+...|+.|++|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999888765 335678999999999999999999999999999999999999999997 666
Q ss_pred CccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCC
Q 016978 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (379)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 194 (379)
.... .+.. . .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+++
T Consensus 77 ~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LGEG-L------------------DGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---eccc-c------------------CCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 5442 1111 2 2499999999999999999999999999999999999999877777799
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCC
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g 273 (379)
|++|||+|+|++|++++++++.+|. +|+++++++++.+.++++|++++++..+ .++.+.+. ...+ ++|+++|+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999996699999999999998 8999999999999999999988887765 55555555 4444 8999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcccccHHHHHHH
Q 016978 274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 337 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 337 (379)
....+..++++++++ |+++.+|..............+.++.++.++..+.. .++++++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 866789999999996 999999876443222222223344777777765432 356666554
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=5.9e-33 Score=260.29 Aligned_cols=304 Identities=22% Similarity=0.257 Sum_probs=238.0
Q ss_pred eeeeeecCCC----C--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCC
Q 016978 11 KAAVAWEPNK----P--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG 81 (379)
Q Consensus 11 ~a~~~~~~~~----~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~ 81 (379)
||+++.+.++ + ++++++|.|++.+++|+||+.++++|+.|+....+... ....+.++|+|++|+|+++|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 5666655442 1 88999999999999999999999999987655444321 1123457899999999999964
Q ss_pred CCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecC-cce
Q 016978 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 160 (379)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~ 160 (379)
.+++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999631 27999999999 999
Q ss_pred EecCCCCC--cccccc-ccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 016978 161 AKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 161 ~~iP~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
+++|++++ +..++. +++++.+||+++...+.+.+|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999995 445555 88899999999878788999999999986 9999999999999999 8999989999999998
Q ss_pred h-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccc----c-Ccce
Q 016978 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS----T-RPFQ 310 (379)
Q Consensus 237 ~-lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~----~-~~~~ 310 (379)
+ +|+++++++++ .++.+.+.+.+.+++|++|||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 99999988876 567777777765589999999998 6699999999996 9999998654321111 1 1122
Q ss_pred eeeccEEEeeecCCCcc--cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 311 LVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 311 ~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
+.++.++.+..+..... ...+.++++++.++.+.+.+ ...++++++++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 33466766655433211 23567788899999988653 3558999999999999887765 7764
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.6e-32 Score=253.41 Aligned_cols=315 Identities=27% Similarity=0.385 Sum_probs=249.5
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++...+.+ +.+.+.+.|.+.+++|+|++.++++|+.|+.+..+..... .+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688888876653 7777888888899999999999999999998887765332 4577899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+...+. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~--------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAADLG--------------------------QY------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccccC--------------------------CC------------------ccceEEEEechHhcEeCCCC
Confidence 99999875431100 12 39999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++.+.++|+++.....+.++++|+|+|+ |.+|++++++++..|+ +++.+++++++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877888999999999988 9999999999999999 8898888999999999999888887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcc-eeeeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 323 (379)
.+. .++.+.+.+.+.+ ++|+++++.++ .....++++++++ |+++.+|..... ...+... .+.++.++.+..+.
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecc
Confidence 765 5677777777766 89999999998 5688899999996 999999865431 1122222 23336666655443
Q ss_pred CC-ccccc----HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 324 GF-KSRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 324 ~~-~~~~~----~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.. ....+ +..+.+++.++.+.+. ....|++++++++++.+.+++.. |+|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 21 11122 3344555667776643 56789999999999999887766 98875
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=2.7e-32 Score=252.22 Aligned_cols=292 Identities=24% Similarity=0.362 Sum_probs=233.6
Q ss_pred CCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccC
Q 016978 29 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 107 (379)
Q Consensus 29 ~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 107 (379)
.|++.+++|+||+.++++|+.|+..+.+..+.. .+|.++|+|++|+|+++|++++++++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 577889999999999999999999888765432 568899999999999999999999999999864210
Q ss_pred CCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhh
Q 016978 108 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187 (379)
Q Consensus 108 ~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 187 (379)
.+ |+|++|+.++.+.++++|+++++.+++.++..+.+||+++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 12 3999999999999999999999999999999999999986
Q ss_pred hccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-Cc
Q 016978 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 265 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~ 265 (379)
+..++++|++|+|+|+ |++|++++|+|+.+|+ +++++.+++++.+.++++|++.+++... .++.+.+.+.+++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5788999999999966 9999999999999999 8999989999999999999999988766 6777788888877 99
Q ss_pred cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC------cccccHHHHHHHHH
Q 016978 266 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYM 339 (379)
Q Consensus 266 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 339 (379)
|+++|++++ ......++++++. |+++.+|.........+....+..+..+....+... .....+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 6688999999996 999999865322222222222222222222211110 01124667888888
Q ss_pred cCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 340 KKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 340 ~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
++.+++. ..+.|++++++++++.+.+++.. |+++
T Consensus 269 ~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 269 EGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8887743 56889999999999999988766 7764
No 117
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=5.6e-32 Score=252.51 Aligned_cols=311 Identities=23% Similarity=0.307 Sum_probs=251.7
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+.+..++.+ +.+.+.+.|.+.+++|+|++.++++|+.|+....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 688888887765 667777777788999999999999999999888775533 24578899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCC
Q 016978 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 166 (379)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV-------------------------------AG------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc-------------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence 999997531 11 38999999999999999999
Q ss_pred CCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 016978 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++++.++|+++.+..++.+|++|+|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998888889999999999987 9999999999999999 8889988999999999999888877
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 016978 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
... .++...+.....+ ++|+++|+.|+ ..+..++.+++++ |+++.+|....... .+++..+ .++.++.+....
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 655 5677777777776 89999999998 4688899999996 99999987432211 3333333 447777776654
Q ss_pred CC-cc------cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 324 GF-KS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~-~~------~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
.. .. ...+.++++++.++.+.+ .+.+.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 32 11 112355677888888764 367889999999999998887766 888763
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=5.7e-32 Score=250.68 Aligned_cols=301 Identities=24% Similarity=0.297 Sum_probs=239.7
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
|||+++..++.. +.+.+.+.|.+.+++|+||+.++++|+.|+..+.|... ...+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 688898887764 56777888888999999999999999999988877542 2355889999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecC
Q 016978 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP 164 (379)
+++||+|+..+.. + .+ |+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~-------------------------~---~~------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------T---RG------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC-------------------------C---CC------------------CcceeEEEecHHHhccCC
Confidence 9999999865320 0 12 389999999999999999
Q ss_pred CCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 016978 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
+++++..++.+++.+.++|+++.+...+.+|++|||+|+ |.+|++++++++..|+ +++++..++ +.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999888899999998877777999999999997 9999999999999999 788887777 8888899998888
Q ss_pred eCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeec
Q 016978 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 322 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 322 (379)
++... .++.. .+.+ ++|+++|++|+. ....++++++++ |+++.+|....... ..+..+.++....+
T Consensus 193 ~~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~ 259 (309)
T cd05289 193 IDYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV 259 (309)
T ss_pred EeCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence 87654 33332 3334 899999999985 689999999996 99999987543111 11122344443333
Q ss_pred CCCcccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
... ...+.++++++.++.+.+ ++.+.|+++++++|++.+.+++.. |+|+
T Consensus 260 ~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 260 EPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred ccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 211 357888999999988763 367889999999999998887765 7763
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=4.6e-31 Score=245.98 Aligned_cols=309 Identities=30% Similarity=0.446 Sum_probs=247.9
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCC-CCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCc
Q 016978 10 CKAAVAWEPNKP--LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
|+|+++..++.+ +.+.+.+ |.+. +++++|++.++++|+.|+..+.|.... ...|.++|||++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688898865543 7777777 6665 599999999999999999888776532 2446689999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCC
Q 016978 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 165 (379)
++||+|+..+ .. |++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------GQ------------------GGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------CC------------------ceeEEEEEcCHHHceeCCC
Confidence 9999998542 01 3899999999999999999
Q ss_pred CCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 016978 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++.+++.+...+.+||+++....++.++++|+|+|+ |++|++++++|+..|+ +|+.++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99998888888899999998777788999999999998 9999999999999999 799998999999999999998888
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc-ceeeeccEEEeeec
Q 016978 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~ 322 (379)
+... .++.+.+.+.+++ ++|.++|++|+ .....++++++++ |+++.+|....... .+.+ ..+.++.++.+...
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 7765 5677788888776 89999999998 6688899999996 99999987432111 1112 11233666666654
Q ss_pred CCCc------ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 016978 323 GGFK------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 323 ~~~~------~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~ 376 (379)
.... ....+.++++++.++.+.+ .....|+++++.+|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 4321 1134677888898888764 367889999999999998887765 88763
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.9e-31 Score=245.68 Aligned_cols=310 Identities=23% Similarity=0.320 Sum_probs=242.1
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCcCC
Q 016978 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||+.+...+.+ +.+.+.+.|.+.+++|+||+.++++|+.|+..+.|..+. ...|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 45666655542 777788888889999999999999999999988776532 245778999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCC
Q 016978 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 167 (379)
||+|+.... + |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~~-------------------------------~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR-------------------------------F------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC-------------------------------C------------------CeeeeEEEecHHHeEECCCCC
Confidence 999985421 1 389999999999999999999
Q ss_pred CccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHhcCCceEeC
Q 016978 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~~~lg~~~v~~ 245 (379)
++.+++.+++.+.++|+++.+..++++|++|+|+|+ |++|++++++|+.+ . .+.+++ ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEee
Confidence 999999998999999999888888999999999998 99999999999999 2 233332 3456788888999988888
Q ss_pred CCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCc--ccc-------------cCcce
Q 016978 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ--EIS-------------TRPFQ 310 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~~~-------------~~~~~ 310 (379)
.+. .++.+.+++.+.+++|+++|+.|+ .....++++++++ |+++.+|...... .+. +.+..
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 765 677777877775589999999998 4588899999996 9999998654211 111 11111
Q ss_pred -eeeccEEEeeecCCCcc-----cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 311 -LVTGRVWKGTAFGGFKS-----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 311 -~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
+..+.++.+..+..... ...+.++++++.++.+.+. ....|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 22366666665432111 1235678888888887643 56889999999999999988766 998864
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.3e-31 Score=247.02 Aligned_cols=295 Identities=25% Similarity=0.315 Sum_probs=227.3
Q ss_pred EEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCC
Q 016978 23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99 (379)
Q Consensus 23 ~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (379)
.+.+.+.|++.+++|+|++.++++|++|+..+.|..+. ...|..+|||++|+|+++|++++.+++||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 77888999999999999999999999999988776521 23467899999999999999999999999998653210
Q ss_pred CCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccc
Q 016978 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179 (379)
Q Consensus 100 ~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 179 (379)
.. |+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 12 389999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHH
Q 016978 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (379)
Q Consensus 180 ~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~ 258 (379)
.+||+++....++++|++|+|+|+ |++|++++++|+.+|+ +|+++..+ ++.+.++++|++++++... .++. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999999877777999999999998 9999999999999999 88888665 8888889999988887655 3332 3
Q ss_pred HhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCccccc---CcceeeeccEEEeeecCCCcccccHHH
Q 016978 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPW 333 (379)
Q Consensus 259 ~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~ 333 (379)
..+.+ ++|+++||+|+. ......+..++++ |+++.+|.......... ..........+...... .....+.+
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK--PNAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec--CCHHHHHH
Confidence 34445 899999999852 2233444448995 99999987543222111 01111112222222211 12467888
Q ss_pred HHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 334 LVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 334 ~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
+++++.++++.+ .+.+.|+++++++|++.+.+++.. |+++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 999999988764 367889999999999999987765 7763
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.98 E-value=1.5e-30 Score=238.75 Aligned_cols=282 Identities=22% Similarity=0.264 Sum_probs=226.9
Q ss_pred CeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCC
Q 016978 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (379)
Q Consensus 35 ~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 114 (379)
++|+||+.++++|++|+....|.. ..+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887764 23577899999999999999999999999997531
Q ss_pred CccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCC
Q 016978 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (379)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 194 (379)
+ |+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+..++++
T Consensus 60 -------------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------P------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------c------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1 389999999999999999999999999998899999998878788999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC--CceEeCCCCCCchHHHHHHHhcCC-CccEEEE
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid 270 (379)
|++|+|+|+ |++|++++|+|+.+|+ +++++..++++.+.++++| ++.+++..+ .++.+.+++.+.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999976 9999999999999999 8999988889999999888 677777655 5777888888776 8999999
Q ss_pred cCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC------cccccHHHHHHHHHcCCCC
Q 016978 271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYMKKEIK 344 (379)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~i~ 344 (379)
+.|+. .+..++++++++ |+++.+|..............+..+.++....+... .....+.++++++.++++.
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99985 799999999996 999999875432111122222222344433322211 0123467788888888876
Q ss_pred CCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 345 VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 345 ~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
+ .....++++++++|++.+.+++.. |+|+
T Consensus 264 ~--~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 P--LPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred c--CCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 3 356789999999999999988765 7763
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=7.5e-30 Score=233.78 Aligned_cols=277 Identities=22% Similarity=0.361 Sum_probs=222.2
Q ss_pred EEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccC
Q 016978 39 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118 (379)
Q Consensus 39 V~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~ 118 (379)
||+.++++|++|++...|..+ .|.++|||++|+|+++|+.++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877643 357899999999999999999999999997531
Q ss_pred ccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEE
Q 016978 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198 (379)
Q Consensus 119 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 198 (379)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|
T Consensus 56 ---------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------P------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------C------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 1 3899999999999999999999999999999999999987788889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC--ceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCC
Q 016978 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 274 (379)
Q Consensus 199 lI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~ 274 (379)
+|+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|+ +.++++.+ .++.+.+.+...+ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999889999999999998 67777765 5677778777776 89999999986
Q ss_pred HHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC-----cccccHHHHHHHHHcCCCCCCCce
Q 016978 275 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF-----KSRSQVPWLVDKYMKKEIKVDEYV 349 (379)
Q Consensus 275 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~i 349 (379)
..+..++.+++++ |+++.+|.........+.+..+..+.++.+..+... .....+.++++++.++++.+. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 6688999999996 999999875321112222222222444444332211 011246678888888887753 4
Q ss_pred eeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 350 THNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 350 ~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
.+.|+++++.++++.+.+++.. |+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 5779999999999999988765 7763
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.4e-27 Score=218.52 Aligned_cols=250 Identities=28% Similarity=0.386 Sum_probs=195.4
Q ss_pred CCCCCCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCcccccc
Q 016978 56 GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 135 (379)
Q Consensus 56 g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~ 135 (379)
|.++. ++|.++|||++|+|+++|++++++++||+|+..
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 44444 488999999999999999999999999999742
Q ss_pred CCCcccccCCcceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHH
Q 016978 136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAK 215 (379)
Q Consensus 136 ~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~ 215 (379)
+.|++|+.++.+.++++|+++++.+++.+ +.+.+||+++ ..+++++|++|||+|+|++|++++++|+
T Consensus 52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 16899999999999999999999998888 7899999986 5788999999999988999999999999
Q ss_pred HcCCCeEEEEcCChhHHHHHHhcC-CceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEE
Q 016978 216 AAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 293 (379)
Q Consensus 216 ~~g~~~vi~v~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv 293 (379)
.+|+++|+++++++++.++++++| ++.++...+ ..+.+ ++|++||+++....+...+++++++ |+++
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~ 187 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV 187 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence 999944999999999999999999 555544322 11233 8999999988877889999999996 9999
Q ss_pred EEccCCCCcccccCcceee-eccEEEeeecCCC---------cccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHH
Q 016978 294 IVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF---------KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 363 (379)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~ 363 (379)
.+|..... ..... ..+. ...++.+...... ...+.+.++++++.++.+... +.+.|+++++++|++
T Consensus 188 ~~g~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~ 263 (277)
T cd08255 188 LVGWYGLK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYR 263 (277)
T ss_pred EEeccCCC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHH
Confidence 99875432 11111 1111 1334444433211 112468889999999987643 578899999999999
Q ss_pred HHhcCC--eeEEEE
Q 016978 364 YMHGGD--CLRCVL 375 (379)
Q Consensus 364 ~~~~~~--~~Kvvi 375 (379)
.+.+++ ..|+++
T Consensus 264 ~~~~~~~~~~k~~~ 277 (277)
T cd08255 264 LLFEDPPECLKVVL 277 (277)
T ss_pred HHHcCCccceeeeC
Confidence 998883 348874
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=1.5e-27 Score=236.12 Aligned_cols=292 Identities=19% Similarity=0.237 Sum_probs=241.2
Q ss_pred eEEEEeeCC---CCCCCeEEEEEeeeeccccccccccCCCCCCCCC-------cccccceeEEEEEeCCCCCCcCCCCEE
Q 016978 22 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-------CILGHEAAGIVESVGEGVTEVQPGDHV 91 (379)
Q Consensus 22 ~~~~~~~~p---~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (379)
+.+.+-|.. +..++.=+.-|-|+.||..|++...|..+...+| .++|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 444455433 2356677899999999999999999988766554 4789999997 4569999
Q ss_pred eecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEecCCCCCccc
Q 016978 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (379)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 171 (379)
+..... -+++..+.++.+++|.+|.+.++++
T Consensus 1499 M~mvpA-------------------------------------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVPA-------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeeeh-------------------------------------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 755320 1678888899999999999999999
Q ss_pred cccccccchhhhhhhhhccCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC----CceEeCC
Q 016978 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNP 246 (379)
Q Consensus 172 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg----~~~v~~~ 246 (379)
|+..|+.++|+|+||..++..++|++|||+ |+|++|++|+.+|.+.|+ +|+.+..+.||++++.++. .+.+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 569999999999999999 8999999999999998643 4445566
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
++ .+|...+++.|+| |+|+|+++... +-++.+++||+.. |+|..+|...-..+.+..+..|++|.++.|..+-+.
T Consensus 1609 Rd--tsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RD--TSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cc--ccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 55 8999999999999 99999999888 5599999999995 999999987655666777777888898888776544
Q ss_pred c--ccccHHHHHHHHHcCCCC--CCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 016978 326 K--SRSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~i~--~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~ 377 (379)
- ..+++.++..++++|.-. +.|+.+++|+-.++++||+++.++++. |||+++
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 2 223566677777665333 456678999999999999999999998 999986
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=7.4e-25 Score=190.74 Aligned_cols=296 Identities=22% Similarity=0.259 Sum_probs=220.5
Q ss_pred EEEEeeCC-CCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccc----cceeEEEEEeCCCCCCcCCCCEEeecCC
Q 016978 23 VIEDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILG----HEAAGIVESVGEGVTEVQPGDHVIPCYQ 96 (379)
Q Consensus 23 ~~~~~~~p-~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 96 (379)
...+++++ ++++++|+||..|-+..|.-..-++-..+. .--|+.|| ..++|+|++. +.+++++||.|.
T Consensus 25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~---- 98 (343)
T KOG1196|consen 25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVW---- 98 (343)
T ss_pred eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEE----
Confidence 33445544 458899999999999876543333221111 11122333 2789999994 668899999995
Q ss_pred cCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCc--ceEecCC--CCCcccc
Q 016978 97 AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDP--QAPLDKV 172 (379)
Q Consensus 97 ~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~--~~~~~~a 172 (379)
|.. +|.||..+++. ..++||. ++++...
T Consensus 99 --------------------------g~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~y 130 (343)
T KOG1196|consen 99 --------------------------GIV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYY 130 (343)
T ss_pred --------------------------Eec----------------------cceEEEEecCcchhcccCCCCCccCHhhh
Confidence 333 89999988764 4455543 4444443
Q ss_pred c-cccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCC
Q 016978 173 C-LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 249 (379)
Q Consensus 173 a-~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~ 249 (379)
. ++..+.+|||..+.+....++|++|+|.|| |++|+++.|+|+.+|+ +|+++..++||.+++++ +|.+..+||.+
T Consensus 131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~- 208 (343)
T KOG1196|consen 131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE- 208 (343)
T ss_pred hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-
Confidence 3 466789999999999999999999999988 9999999999999999 99999999999999885 79999999988
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC---Cccccc--CcceeeeccEEEeeecCC
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---GQEIST--RPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~---~~~~~~--~~~~~~~~~~i~~~~~~~ 324 (379)
+.+..+++++..+.|+|+-||.+|+ ..+...+..|+.. |+++.+|+.+. +.+..+ ....+.+.+.+.++....
T Consensus 209 e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d 286 (343)
T KOG1196|consen 209 ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD 286 (343)
T ss_pred ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence 2489999999888899999999999 5588999999995 99999997641 111111 122234467777755443
Q ss_pred Cc--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 016978 325 FK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 325 ~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi~~~ 378 (379)
+. ...-++.+..++++|+|...+-+.. .|+..+.||..|-+++.. |.++++.
T Consensus 287 ~~d~~~k~ld~l~~~ikegKI~y~edi~~--Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 287 YLDKYPKFLDFLLPYIKEGKITYVEDIAD--GLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhhhHHHHHHHHHHHhcCceEEehhHHH--HHhccHHHHHHHhccCcccceEEEee
Confidence 32 2334677888899999996544433 699999999999999886 9998875
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=3.3e-23 Score=162.00 Aligned_cols=108 Identities=37% Similarity=0.689 Sum_probs=94.0
Q ss_pred CCeEEEEEeeeeccccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCC
Q 016978 34 AGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112 (379)
Q Consensus 34 ~~~VlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~ 112 (379)
|+||+|||.+++||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999994 4555889999999999999999999999999999999998999999999999999
Q ss_pred CCCccCccccceecCCCccccccCCCcccccCCcceeeeeEEecCcceEec
Q 016978 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 113 c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i 163 (379)
|.+... +|.. .+| +|+||+.+|+++++|+
T Consensus 81 c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLG-LDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTS-STC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcC-CCC------------------cccCeEEEehHHEEEC
Confidence 987664 3433 445 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.73 E-value=3.7e-17 Score=132.05 Aligned_cols=127 Identities=29% Similarity=0.445 Sum_probs=112.1
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHH
Q 016978 205 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283 (379)
Q Consensus 205 ~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~ 283 (379)
++|++++|+|+++|+ +|++++++++|+++++++|+++++++++ .++.+.+++.+++ ++|+||||+|++..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999987 7799999999998 99999999998899999999
Q ss_pred HhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCcccccHHHHHHHHH
Q 016978 284 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYM 339 (379)
Q Consensus 284 ~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 339 (379)
+++++ |+++.+|... ....+++...++. ++++.+++.+. .+++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99996 9999999976 4456666666555 89999998764 468888888775
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.46 E-value=1.2e-12 Score=123.88 Aligned_cols=175 Identities=15% Similarity=0.176 Sum_probs=133.4
Q ss_pred hhhhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhc
Q 016978 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 183 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
+.++.+..+ ..+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|++.++.+|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344445444 4689999999999999999999999999 89999999999999999998432 1 11122
Q ss_pred CCCccEEEEcCCCHHHHHHH-HHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCcccccHH--HHHHH
Q 016978 262 DGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVDK 337 (379)
Q Consensus 262 ~~g~d~vid~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~--~~~~~ 337 (379)
.++|+||+|+|+...++.. +..++++ |+++.+|.. ...++...+.. ++++.++..... ..+++ +.+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888876 9999996 999999864 23444444443 666666643321 12455 78999
Q ss_pred HHcCCC-CCCCceeee-----eecc-hHHHHHHHHhcCCee--EEEEecC
Q 016978 338 YMKKEI-KVDEYVTHN-----MTLG-EINEAFRYMHGGDCL--RCVLKMQ 378 (379)
Q Consensus 338 ~~~~~i-~~~~~i~~~-----~~~~-~i~~A~~~~~~~~~~--Kvvi~~~ 378 (379)
+.+|++ .+...+.+. |+|+ |+.+++..+.+++.. |+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999999 777778888 8999 999999999887653 8887653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.35 E-value=2.2e-11 Score=118.28 Aligned_cols=153 Identities=18% Similarity=0.221 Sum_probs=112.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCC-----------CchHHHHHHH
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLVD 259 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~-----------~~~~~~~i~~ 259 (379)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+. +.++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 5689999999999999999999999999 89999999999999999999854 554321 1233333333
Q ss_pred h-cC--CCccEEEEcCCC-----HHHH-HHHHHHhccCCceEEEEccCCCC-cccccCcceee--eccEEEeeecCCCcc
Q 016978 260 L-TD--GGVDYSFECIGN-----VSVM-RAALECCHKGWGTSVIVGVAASG-QEISTRPFQLV--TGRVWKGTAFGGFKS 327 (379)
Q Consensus 260 ~-~~--~g~d~vid~~g~-----~~~~-~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~--~~~~i~~~~~~~~~~ 327 (379)
. .+ +++|+||+|++. +.++ +++++.++++ |+++++|....+ ...+.+...+. +++++.|.+.. +
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~--P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL--P- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC--c-
Confidence 2 33 379999999996 3464 9999999997 999999985322 23344333343 48888877532 2
Q ss_pred cccHH-HHHHHHHcCCCCCCCcee
Q 016978 328 RSQVP-WLVDKYMKKEIKVDEYVT 350 (379)
Q Consensus 328 ~~~~~-~~~~~~~~~~i~~~~~i~ 350 (379)
..++ +..+++.++.+.+.++++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 3455 589999998888666654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.27 E-value=1.8e-12 Score=104.03 Aligned_cols=120 Identities=22% Similarity=0.286 Sum_probs=77.0
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC--CHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeecc
Q 016978 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 315 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 315 (379)
||++++++|++ .++ ...+++|+|||++| ....+..+++++ ++ |+++.++. ....+... ....
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~--~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARR--LKGR 64 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHH--HHCH
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhh--hccc
Confidence 69999999986 565 22349999999999 655557777888 96 99999974 00001000 0111
Q ss_pred EEEeeecCC-Cc---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016978 316 VWKGTAFGG-FK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 316 ~i~~~~~~~-~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~A~~~~~~~~~~-Kvvi 375 (379)
.+....+.. .. ..+.++++++++++|++++. +.++|||+++.+|++.+++++.. |+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 122222221 01 23459999999999999964 88999999999999999999987 9997
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.59 E-value=2.7e-07 Score=84.17 Aligned_cols=167 Identities=21% Similarity=0.305 Sum_probs=101.2
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhc----CCceEeCCCCCCchHHHHHHHhcCC
Q 016978 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
.+.+++|++||.+|+|+ |..+.++++..|.. +|++++.+++.++.+++. +.+.+-... .++.+ + .+.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cchhh-C-CCCCC
Confidence 35688999999999987 98888889888763 799999999998888763 332211000 11110 0 12234
Q ss_pred CccEEEEcC------CCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCcccccHHHHHHH
Q 016978 264 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 337 (379)
Q Consensus 264 g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 337 (379)
.||+|+... .....+..+.+.|+++ |+++..+..... .+ +..+.....+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~---~~~~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL---PEEIRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC---CHHHHHhHHHHhccccC---CCCHHHHHHH
Confidence 799998543 2246799999999997 999987664322 11 11111111111111111 1244556666
Q ss_pred HHc-CCCCCCCceeeeeecchHHHHHHHH--hcCC
Q 016978 338 YMK-KEIKVDEYVTHNMTLGEINEAFRYM--HGGD 369 (379)
Q Consensus 338 ~~~-~~i~~~~~i~~~~~~~~i~~A~~~~--~~~~ 369 (379)
+.+ |.........+.++++++.++++.+ .+++
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 665 3333322245668899999999988 4444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.53 E-value=9.1e-07 Score=86.11 Aligned_cols=106 Identities=21% Similarity=0.315 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCC-----------CchHHHHHHHh
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLVDL 260 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~-----------~~~~~~~i~~~ 260 (379)
.++++|+|+|+|.+|++++++|+.+|+ +|++++.++++++.++++|++.+ ++..+. ..++.+..++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999998763 222110 12344333333
Q ss_pred cC---CCccEEEEcC---CCHH---HHHHHHHHhccCCceEEEEccCCC
Q 016978 261 TD---GGVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 261 ~~---~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
.. .++|++|+|+ |.+. ..++.++.++++ +.+|+++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 33 2799999999 5433 467889999997 99999987543
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.41 E-value=4.9e-06 Score=79.54 Aligned_cols=103 Identities=25% Similarity=0.318 Sum_probs=78.3
Q ss_pred hhhhhhhccCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHh
Q 016978 182 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 182 a~~~l~~~~~~~-~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~ 260 (379)
.|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 355544443444 89999999999999999999999999 899999988887666666754 221 21222
Q ss_pred cCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccCC
Q 016978 261 TDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 261 ~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 299 (379)
.++|+||+++|+.+.+. ..+..++++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26899999999988776 678888996 8888888754
No 135
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.26 E-value=5.7e-08 Score=93.68 Aligned_cols=159 Identities=18% Similarity=0.200 Sum_probs=104.6
Q ss_pred ccccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCC
Q 016978 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 145 (379)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 145 (379)
.-|.|+++.+.+|++++.+ +|++.+.+ ||.|.+| ++.|..... .|.. .++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~-l~~---------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKV-LER---------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHH-HHH----------------
Confidence 3588999999999998776 66777777 9999988 455554332 2222 333
Q ss_pred cceeeeeEEecCcceEe---c-CCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 016978 146 TSTFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR 221 (379)
Q Consensus 146 ~g~~~~~~~v~~~~~~~---i-P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~ 221 (379)
.|++++.++. .+.. | +..++...+| .....+..+..++++|+|+|+|.+|..+++.++..|+.+
T Consensus 139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 8988888765 3332 2 2222222221 110122333467899999999999999999999999668
Q ss_pred EEEEcCChhHH-HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 016978 222 VIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 222 vi~v~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 276 (379)
|++++++.++. ++++++|.. .+.. .+..+.+ .++|+||.|++.+.
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence 99999998875 467777763 2222 1222222 25999999988754
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.22 E-value=1.5e-05 Score=75.72 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=77.9
Q ss_pred hhhhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhc
Q 016978 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 183 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
+.++.+..+ ..+|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...++..|+. +++ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence 344444434 4689999999999999999999999999 899998888887777777763 221 11222
Q ss_pred CCCccEEEEcCCCHHHHHH-HHHHhccCCceEEEEccCC
Q 016978 262 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 262 ~~g~d~vid~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~ 299 (379)
.+.|++|+++|+...++. .+..++++ +.++.+|-..
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 257999999999887875 88888996 8999887653
No 137
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.15 E-value=8e-05 Score=67.90 Aligned_cols=140 Identities=16% Similarity=0.123 Sum_probs=92.5
Q ss_pred eeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhcc---CCCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 016978 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 222 (379)
Q Consensus 148 ~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~vG~~a~~la~-~~g~~~v 222 (379)
.|-+|.++..+..+.- +....++..-| .+.|+|. |.+.. ..-..+.|||.+| +-.++.++.+++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 5666777665554411 11112222223 4566665 22221 1234467777877 889999888888 5555599
Q ss_pred EEEcCChhHHHHHHhcCC-ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC
Q 016978 223 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 223 i~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
|++ +|+...++.+++|. +.|+.|++ +..+.....-+++|.+|+..+...+...+....-..+.+|..+.
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 999 66777789999997 55777765 44444446678999999999888888888886456777887543
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.11 E-value=2e-05 Score=70.82 Aligned_cols=133 Identities=23% Similarity=0.272 Sum_probs=83.4
Q ss_pred eeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 016978 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 148 ~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
+|.+|.. +...++.+++.+++..+..-. +.. .+..+.. ...++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~~--~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALEK--LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHHh--hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555543 667889999988877654221 111 1111211 256899999999986 887776554 67767999999
Q ss_pred ChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC--CccEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 016978 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 228 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~--g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++...+.+++.....-+. .. . ....+ .||+|+...... ..++.+.+.|+++ |+++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~-~~--~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVE-LN--V-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCC-ce--E-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 999888776531110000 00 0 01111 599998655442 4567888889997 999987654
No 139
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.11 E-value=5.1e-05 Score=69.78 Aligned_cols=95 Identities=22% Similarity=0.332 Sum_probs=74.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
.+++|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.++++|++.+ .. .++ .+.. ..+|+||+|++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l----~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SEL----AEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHH----HHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999988888888887532 11 122 2221 25999999987
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCC
Q 016978 274 NVSVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
........++.++++ +.++.++....
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 754456777889996 99999987543
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.10 E-value=1.1e-05 Score=74.92 Aligned_cols=108 Identities=20% Similarity=0.218 Sum_probs=79.8
Q ss_pred cceEecCCCCCccccccccccchhhhhhhhhccCC----CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-
Q 016978 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV----EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF- 232 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~- 232 (379)
...+++|+.+..+.++... +.+.+++++ +.+.. .++++|+|+|+|.+|..+++.++..|+.+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 5778889999888887765 566676664 33332 4799999999999999999999998877899999998764
Q ss_pred HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHH
Q 016978 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (379)
Q Consensus 233 ~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~ 277 (379)
++++++|+. +++. .++.+.+ ..+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPL----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeH----HHHHHHH-----hcCCEEEECCCCCch
Confidence 777888873 3322 1222222 148999999998664
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.09 E-value=3e-05 Score=74.48 Aligned_cols=101 Identities=25% Similarity=0.318 Sum_probs=78.4
Q ss_pred hhhhhhccCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhc
Q 016978 183 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 183 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
+.++++..++ -.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|... + +..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 4444454443 679999999999999999999999999 8999998888776777777642 1 1222221
Q ss_pred CCCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccC
Q 016978 262 DGGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 298 (379)
..|+++++.|+...+ ...+..++++ +.++.+|-.
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 489999999987754 8899999996 999999875
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.84 E-value=0.00014 Score=69.08 Aligned_cols=98 Identities=21% Similarity=0.272 Sum_probs=68.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.+ ++........+ ..++.+.+ ..+|+||+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888777654 45432222221 12222222 2589999997
Q ss_pred ---CC--HH-HHHHHHHHhccCCceEEEEccCC
Q 016978 273 ---GN--VS-VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 273 ---g~--~~-~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+. +. .....++.++++ +.++.++...
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 32 22 236777889996 9999998653
No 143
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.80 E-value=0.00014 Score=70.15 Aligned_cols=101 Identities=23% Similarity=0.327 Sum_probs=75.9
Q ss_pred hhhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcC
Q 016978 184 GAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 184 ~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~ 262 (379)
.++++..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+.. . ++.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----
Confidence 34444333 4579999999999999999999999999 8999988877665555566532 1 122222
Q ss_pred CCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccCC
Q 016978 263 GGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 263 ~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 299 (379)
...|+|+.+.|....+. ..+..++++ +.++.+|-..
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 25899999999877774 889999997 9999998653
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.74 E-value=0.0002 Score=73.89 Aligned_cols=138 Identities=24% Similarity=0.317 Sum_probs=87.6
Q ss_pred ceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 016978 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 147 g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
-++++|..+++..++.+ +..+.+++..... ...+..+|++|||+|+ |++|..+++.+...|+ +|+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~ 452 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA 452 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence 46677777887777777 5555566542110 0122346899999987 9999999999999999 89999
Q ss_pred cCChhHHHHHH-hcCC--c-e--EeCCCCCCchHHHHHHHhc--CCCccEEEEcCCC-----------------------
Q 016978 226 DIDPKKFDRAK-NFGV--T-E--FVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN----------------------- 274 (379)
Q Consensus 226 ~~~~~~~~~~~-~lg~--~-~--v~~~~~~~~~~~~~i~~~~--~~g~d~vid~~g~----------------------- 274 (379)
+++.++.+.+. .++. . . ..|..+ ...+.+.+.+.. .+++|++|+++|.
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887765543 3433 1 1 123332 122333333321 2479999999982
Q ss_pred --HHHHHHHHHHhcc---CCceEEEEccC
Q 016978 275 --VSVMRAALECCHK---GWGTSVIVGVA 298 (379)
Q Consensus 275 --~~~~~~~~~~l~~---~~G~iv~~g~~ 298 (379)
..+++.++..+++ + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1234555666655 4 789988764
No 145
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.72 E-value=0.00019 Score=61.47 Aligned_cols=111 Identities=21% Similarity=0.201 Sum_probs=78.3
Q ss_pred cccccccchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH----HHHHhcCCceE-eCC
Q 016978 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEF-VNP 246 (379)
Q Consensus 172 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~----~~~~~lg~~~v-~~~ 246 (379)
.-.+.-+.+.|. +.+...+++|++||=+|+| .|+.++-+|+..| +|+.+++.++-. +.++.+|...| +..
T Consensus 52 gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~ 126 (209)
T COG2518 52 GQTISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRH 126 (209)
T ss_pred CceecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEE
Confidence 333333344443 4677889999999999996 6999999999988 899999988743 44556888543 222
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.|. .+.+... .||.|+-+.+-+..-..+++.|+++ |+++.-
T Consensus 127 gDG-------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 127 GDG-------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred CCc-------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 221 1123333 8999998877766568889999997 998755
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.69 E-value=0.00023 Score=65.41 Aligned_cols=97 Identities=24% Similarity=0.293 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCce-EeCCCCCCchHHHHHHHhcCCCcc
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~i~~~~~~g~d 266 (379)
..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +... +.... .+ ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 45789999999987 887777665 5777999999999887777652 2211 10000 01 1112234899
Q ss_pred EEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 016978 267 YSFECIGNV---SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 267 ~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+|+...... .++..+.+.|+++ |.++..|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998654332 4567788999997 999887653
No 147
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.63 E-value=5.6e-05 Score=76.22 Aligned_cols=80 Identities=26% Similarity=0.361 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhHHHHHHhcCCceEeCCCC-
Q 016978 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 248 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~---------------------~~~~~~~~~lg~~~v~~~~~- 248 (379)
..++|++|+|+|+|+.|+.+++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 35677888999887766432
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHH
Q 016978 249 HDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~g~d~vid~~g~~~ 276 (379)
.+... +.+ ..++|+||+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 11111 111 126999999999853
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.54 E-value=0.00016 Score=70.17 Aligned_cols=158 Identities=20% Similarity=0.228 Sum_probs=95.1
Q ss_pred cccceeEEEEEeCCCCCCcCCCCEEeecCCcCCCCCccccCCCCCCCCCccCccccceecCCCccccccCCCcccccCCc
Q 016978 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (379)
Q Consensus 67 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 146 (379)
-|+|+++.+.+|++++.+.-+|+ +.. ||.|.. -+..|..... .|.. .++
T Consensus 92 ~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk~----a~~~a~~~g~---~g~~-l~~----------------- 140 (423)
T PRK00045 92 EGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVKD----AYALAQEAGT---VGTI-LNR----------------- 140 (423)
T ss_pred CCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHHH----HHHHHHHcCC---chHH-HHH-----------------
Confidence 59999999999999887744444 333 444431 1222221111 1111 122
Q ss_pred ceeeeeEEecCcceEecCCCCCccccccccccchhhhhhhhhccC----CCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 016978 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK----VEPGSIVAVFGLGTVGLAVAEGAKAAGASRV 222 (379)
Q Consensus 147 g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~g~~VlI~Gag~vG~~a~~la~~~g~~~v 222 (379)
.|++.+ ++|..+..+.+.. ..+.+.+++++ +.+. -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 141 -lf~~a~--------~~~k~v~~~t~i~-~~~~Sv~~~Av-~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 141 -LFQKAF--------SVAKRVRTETGIG-AGAVSVASAAV-ELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred -HHHHHH--------HHHhhHhhhcCCC-CCCcCHHHHHH-HHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 554443 3344443332222 22445555554 2222 2578999999999999999999999998789
Q ss_pred EEEcCChhHHH-HHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 016978 223 IGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 223 i~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 276 (379)
++++++.++.+ +++++|.+ ++.. .+..+.+ .++|+||+|+|.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~----~~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPL----DELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeH----HHHHHHh-----ccCCEEEECCCCCC
Confidence 99999988754 77777753 3322 1221111 26899999998754
No 149
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.53 E-value=0.0011 Score=60.70 Aligned_cols=94 Identities=20% Similarity=0.284 Sum_probs=69.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
.|++|+|+|.|.+|..++..++.+|+ +|+++++++++.+.+.++|... +.. .++.+.+ ..+|+|+++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~----~~l~~~l-----~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL----NKLEEKV-----AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH----HHHHHHh-----ccCCEEEECCC
Confidence 57999999999999999999999999 8999999988877777777532 111 1222221 25899999987
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCC
Q 016978 274 NVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
..-.-...+..++++ ..++.++...
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 643235567778885 8888887643
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.52 E-value=0.00059 Score=59.58 Aligned_cols=79 Identities=18% Similarity=0.301 Sum_probs=59.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCC----ceEeCCCCCCchHHHHHHHhcCC--Cc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~----~~v~~~~~~~~~~~~~i~~~~~~--g~ 265 (379)
.++.++|+|| +++|.+.++.+...|+ +|+.+.+.+++++.+. +++. ...+|..+ ..+....+...... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4588999999 9999999999999999 9999999999887655 5773 22345444 23444455544444 69
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++.+|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998885
No 151
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.51 E-value=0.00053 Score=55.37 Aligned_cols=74 Identities=24% Similarity=0.336 Sum_probs=53.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCc--eEeCCCCCCchHHHHHHHhcCCCccEEEE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~--~v~~~~~~~~~~~~~i~~~~~~g~d~vid 270 (379)
.+.+|||+|+|+.|.+++..+...|+++|+.+.++.+|.+.+. .++.. .++.+++ +.+.+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 5899999999999999999999999988999999988866554 45322 2333332 22111 15999999
Q ss_pred cCCCHH
Q 016978 271 CIGNVS 276 (379)
Q Consensus 271 ~~g~~~ 276 (379)
|++.+.
T Consensus 82 aT~~~~ 87 (135)
T PF01488_consen 82 ATPSGM 87 (135)
T ss_dssp -SSTTS
T ss_pred ecCCCC
Confidence 988753
No 152
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.42 E-value=0.001 Score=56.32 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=58.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC---ceEeCCCCC--CchHHHHHHHhcCCCccE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDH--DKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~---~~v~~~~~~--~~~~~~~i~~~~~~g~d~ 267 (379)
-|.+|||+|. +++|+..++-...+|- +||.+.+++++++-+++.-. ..+.|..+. ...+.+.+.+..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 3789999965 9999999999999998 99999999999998876433 224444431 1235555555433 5899
Q ss_pred EEEcCCC
Q 016978 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+++++|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998875
No 153
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0024 Score=58.12 Aligned_cols=77 Identities=23% Similarity=0.373 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEEEEc
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~g~d~vid~ 271 (379)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899988 9999999999999999 89999898887777666665433 34433 133333333332 2379999999
Q ss_pred CCC
Q 016978 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
+|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 154
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.33 E-value=0.0022 Score=54.61 Aligned_cols=104 Identities=20% Similarity=0.224 Sum_probs=73.3
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCce-EeCCCC--CCchHHHHHHHhcCCCccE
Q 016978 194 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD--HDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga--g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~~~~~--~~~~~~~~i~~~~~~g~d~ 267 (379)
..+.|||+|. |++|.+++.-...-|+ .|+++.+.-+++..+. ++|... -+|..+ +-..+..+++..++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999965 9999999999999999 9999999998887666 677532 233322 1234555677777889999
Q ss_pred EEEcCCCHH----------H--------------H--HHHHHHhccCCceEEEEccCC
Q 016978 268 SFECIGNVS----------V--------------M--RAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 268 vid~~g~~~----------~--------------~--~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.++.+|.+. . + .....+++.. |+||.+|...
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~ 141 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLA 141 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEeccee
Confidence 999777521 1 1 1223456775 9999988654
No 155
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.30 E-value=0.0033 Score=54.31 Aligned_cols=102 Identities=25% Similarity=0.418 Sum_probs=70.4
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcC-CceEeCCCCCCchHHHHHHHhc
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
....+.++++||-+|+|. |.+++.+++.++. .+|++++.+++..+.++ .+| .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 456788999999999987 9999999988753 48999999998877664 355 22221111 1222222222
Q ss_pred CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 016978 262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999985443 45688888999997 998853
No 156
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.0041 Score=55.06 Aligned_cols=102 Identities=25% Similarity=0.326 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc---CCceEe--CCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+ |..+ .....+.+.+.. .++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4789999988 9999999999999999 899999988876554 222 222222 2222 122333333221 136
Q ss_pred ccEEEEcCCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 016978 265 VDYSFECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 265 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+|.++.+.+.. ..++..+..++++ |+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 89999888741 1244555666775 899988764
No 157
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.22 E-value=0.0017 Score=62.09 Aligned_cols=109 Identities=19% Similarity=0.251 Sum_probs=75.4
Q ss_pred cchhhhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHH
Q 016978 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257 (379)
Q Consensus 178 ~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i 257 (379)
+-.+.+..+.+..++++|++||-+|+| .|.++..+++..|+ +|++++.+++..+.+++.....-+.... .++
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~---- 222 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY---- 222 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----
Confidence 334445556677888999999999985 67778888988898 8999999999999888754321111110 122
Q ss_pred HHhcCCCccEEEEc-----CCC---HHHHHHHHHHhccCCceEEEEc
Q 016978 258 VDLTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 258 ~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g 296 (379)
... .+.+|.|+.. +|. ...++.+.+.|+++ |.++...
T Consensus 223 ~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 111 3479988743 233 35688899999997 9998754
No 158
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.22 E-value=0.0029 Score=58.75 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=71.6
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCchHHHHHHHhc
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+....
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--
Confidence 455678899999999997 59999999998874 36999999998766554 35665432221 122111111
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.+|+|+.+.+........++.++++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999888766667788899997 998763
No 159
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0033 Score=57.31 Aligned_cols=79 Identities=16% Similarity=0.243 Sum_probs=56.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCchHHHHHHH---hcCCCccEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVD---LTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~---~~~~g~d~v 268 (379)
.+++|||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ..++...+.+ ...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4678999998 9999999999888999 89999999888877776665433 24333 1223333332 233479999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
++++|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 160
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.16 E-value=0.0053 Score=51.55 Aligned_cols=104 Identities=27% Similarity=0.336 Sum_probs=70.8
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCchHHHHHHHhcC
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~ 262 (379)
+.+.++++|+.++=+|+| .|-.+++++...-..+||++++++++.++.+ ++|.+.+.... .+..+.+..+.
T Consensus 27 ls~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~- 101 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP- 101 (187)
T ss_pred HHhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC-
Confidence 355678999988878885 3666778885444559999999999887665 57876432221 12223333221
Q ss_pred CCccEEEEcCCC--HHHHHHHHHHhccCCceEEEEcc
Q 016978 263 GGVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 263 ~g~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+|.+|---|. ...++.++..|+++ |++|.-..
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 59999964333 46788999999997 99986644
No 161
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.12 E-value=0.0042 Score=55.64 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c----CCce-E--eCCCCCCchHHHHHHHhcCC
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTE-F--VNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~-v--~~~~~~~~~~~~~i~~~~~~ 263 (379)
..+.++||+|| +++|...+..+...|+ +++.+.|+++|++.+.+ + |... + .|..+ +.+......++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence 46789999999 9999999999999999 99999999999876643 2 2222 2 23333 22333333333222
Q ss_pred --CccEEEEcCCC
Q 016978 264 --GVDYSFECIGN 274 (379)
Q Consensus 264 --g~d~vid~~g~ 274 (379)
.+|++++++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 79999999986
No 162
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.11 E-value=0.0073 Score=51.67 Aligned_cols=101 Identities=22% Similarity=0.296 Sum_probs=62.7
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEE
Q 016978 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYS 268 (379)
Q Consensus 190 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-g~d~v 268 (379)
..+++|++||.+|+|+-+.......+..+..+|++++.++.+ ...++. ++..+-......+.+.+..+. ++|+|
T Consensus 28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D~V 102 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVDVV 102 (188)
T ss_pred cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCccEE
Confidence 456899999999997655544444444344489999998764 112333 222111113334445554444 89999
Q ss_pred EE-cC----CC------------HHHHHHHHHHhccCCceEEEEc
Q 016978 269 FE-CI----GN------------VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 269 id-~~----g~------------~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+. .. |. ..++..+.++|+++ |+++...
T Consensus 103 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 103 MSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 94 22 21 35678889999997 9998753
No 163
>PRK06182 short chain dehydrogenase; Validated
Probab=97.05 E-value=0.0035 Score=56.99 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~g~d~vi 269 (379)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++...+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 4679999998 9999999999988999 89999898887766555554332 23333 133333343322 23799999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 164
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.03 E-value=0.0071 Score=51.24 Aligned_cols=93 Identities=25% Similarity=0.311 Sum_probs=63.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCchHHHHHHHhcCCCccEEEEcCCC-
Q 016978 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN- 274 (379)
Q Consensus 198 VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~g~d~vid~~g~- 274 (379)
|+|+|+ |.+|..+++.+...|. +|+++.+++++.+. ..+.+.+. +..+ . +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d--~---~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD--P---DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC--H---HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh--h---hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998776 44444332 2222 2 22333222 69999999985
Q ss_pred ---HHHHHHHHHHhccC-CceEEEEccCC
Q 016978 275 ---VSVMRAALECCHKG-WGTSVIVGVAA 299 (379)
Q Consensus 275 ---~~~~~~~~~~l~~~-~G~iv~~g~~~ 299 (379)
.+.....++.++.. -.+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 34455666665543 13677776543
No 165
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.02 E-value=0.0064 Score=54.94 Aligned_cols=105 Identities=22% Similarity=0.342 Sum_probs=67.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee----CCCCCCchHHHHHHH--hc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV----NPKDHDKPIQQVLVD--LT 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~----~~~~~~~~~~~~i~~--~~ 261 (379)
.|+.|+|+|| +++|.+.+--.-..|+ +++.+.+..++++.+ ++.++.. ++ |-.+ ..+....+.+ ..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 4789999999 9999988888888899 677766777666555 4455444 22 2222 1223323322 12
Q ss_pred CCCccEEEEcCCCH-------------------------HHHHHHHHHhccCC-ceEEEEccCCC
Q 016978 262 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGW-GTSVIVGVAAS 300 (379)
Q Consensus 262 ~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~iv~~g~~~~ 300 (379)
.|++|++++.+|-. .....++..|++.+ |+||.++...+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 35899999987751 22456666666644 89999987654
No 166
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.98 E-value=0.0047 Score=52.37 Aligned_cols=89 Identities=31% Similarity=0.392 Sum_probs=59.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
--.|++|.|+|.|.+|...+++++.+|+ +|++.+++....+...+.+... .++.+.+.+ .|+|+.+
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLAQ-----ADIVSLH 98 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHHH------SEEEE-
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcch-----hhhhhhh
Confidence 3468999999999999999999999999 9999999888766445555421 223333333 7888876
Q ss_pred CCCH----H-HHHHHHHHhccCCceEEEE
Q 016978 272 IGNV----S-VMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 272 ~g~~----~-~~~~~~~~l~~~~G~iv~~ 295 (379)
.... . .=...+..++++ ..+|.+
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~ 126 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNV 126 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEES
T ss_pred hccccccceeeeeeeeeccccc-eEEEec
Confidence 6531 1 124556677775 666655
No 167
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.011 Score=52.17 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC---ceEe--CCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~---~~v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
++.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.. -+.+ |..+ ..++.+.+.+.. .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999988888899 799998887765443 33321 1222 2222 233444444332 137
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 168
>PRK04148 hypothetical protein; Provisional
Probab=96.90 E-value=0.005 Score=49.10 Aligned_cols=94 Identities=22% Similarity=0.277 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.++.+|+++|.| .|...++.+..+|. .|++++.+++..+.+++.+.+.+.+.-- ..+. ++ .+++|+++.+-
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~-----~~-y~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL-----EI-YKNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH-----HH-HhcCCEEEEeC
Confidence 456889999999 88755666667899 9999999999999999988766543211 1111 11 13799999998
Q ss_pred CCHHHHHHHHHHhccCCceEEEE
Q 016978 273 GNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
..++..+.+++..++-+..++..
T Consensus 86 pp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 86 PPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE
Confidence 88887777777766642333333
No 169
>PRK12742 oxidoreductase; Provisional
Probab=96.88 E-value=0.023 Score=50.26 Aligned_cols=101 Identities=22% Similarity=0.264 Sum_probs=62.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHH-HHHhcCCceE-eCCCCCCchHHHHHHHhcCCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~-~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~g~d~vi 269 (379)
++++|||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999988 9999999999999999 7776644 444443 3344555432 23322 1223333332 23699999
Q ss_pred EcCCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 016978 270 ECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 270 d~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+++|.. + +...++..+... |+++.++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 998741 0 113444455665 8999887643
No 170
>PRK14967 putative methyltransferase; Provisional
Probab=96.88 E-value=0.058 Score=47.48 Aligned_cols=98 Identities=22% Similarity=0.217 Sum_probs=64.1
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCC
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
....++++++||-.|+|. |.+++.+++. ++.+|++++.+++..+.+++ .+....+... ++.+. ...+
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCC
Confidence 344577899999999986 8888888875 65589999999987776553 3433222221 22221 1224
Q ss_pred CccEEEEcCCC---------------------------HHHHHHHHHHhccCCceEEEE
Q 016978 264 GVDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 264 g~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.||+|+...+. ...+..+.+.|+++ |+++.+
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 79998863110 12456778889996 998865
No 171
>PRK08017 oxidoreductase; Provisional
Probab=96.88 E-value=0.0077 Score=53.96 Aligned_cols=77 Identities=25% Similarity=0.353 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCchH---HHHHHHhcCCCccEEEE
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPI---QQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~---~~~i~~~~~~g~d~vid 270 (379)
++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+++.++..+ .|..+ ...+ .+.+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 89999999988887777776543 23322 1222 22333333357899998
Q ss_pred cCCC
Q 016978 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 172
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0053 Score=57.56 Aligned_cols=79 Identities=20% Similarity=0.358 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCchHHHHHHHh--cCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDL--TDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~--~~~ 263 (379)
++++|||+|+ |++|.++++.+...|+ +|+.+++++++++.+ ++.|.+.. .|..+ ..+..+.+.+. ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 5789999998 9999999999999999 899998988876533 34565432 23332 12222222221 124
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 173
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.74 E-value=0.017 Score=54.71 Aligned_cols=96 Identities=20% Similarity=0.188 Sum_probs=66.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC---Cc-eEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg---~~-~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
.+|||+|+|.+|..+++.+.+.|-.+|++.+++.++.+.+.... .. ..+|..+ .....+.++ ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHh-----cCCEEEEe
Confidence 57999999999999999999888459999999999888887653 22 2445443 123333332 35999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 272 IGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+.......+-.|++.+ =.++.....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 99866555444555553 455555443
No 174
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.74 E-value=0.0063 Score=47.82 Aligned_cols=101 Identities=22% Similarity=0.319 Sum_probs=67.5
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCchHHHHHHHh
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~ 260 (379)
.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++... ++..+. .. ... .
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--~~---~~~-~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA--PE---ALE-D 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc--cc---cCh-h
Confidence 3444567788999999976 8888899988764589999999988777653 34332 222111 10 011 1
Q ss_pred cCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 016978 261 TDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 261 ~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
..+.+|+|+-..+. ..+++.+.+.|+++ |+++..
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 12379999875433 34788999999997 998864
No 175
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.74 E-value=0.011 Score=48.74 Aligned_cols=92 Identities=26% Similarity=0.362 Sum_probs=60.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
.-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +. ...+.+ ...|+++-+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence 4579999999999999999999999999 999999999876666655653 21 122221 258999999
Q ss_pred CCCHHHH-HHHHHHhccCCceEEEEccC
Q 016978 272 IGNVSVM-RAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 272 ~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 298 (379)
+|..+.+ .+-+..|+++ ..+...|-.
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 9986643 5677888885 555555543
No 176
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.73 E-value=0.014 Score=50.68 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=73.1
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCCC
Q 016978 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG 264 (379)
Q Consensus 190 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~g 264 (379)
++.+..++||=+|.+ +|+.++++|..+. -.+++.++.++++.+.+++ .|.+..+.--. ..+..+.+.+...+.
T Consensus 55 ~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~gdal~~l~~~~~~~ 132 (219)
T COG4122 55 ARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-GGDALDVLSRLLDGS 132 (219)
T ss_pred HHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-cCcHHHHHHhccCCC
Confidence 445577899988874 6888999999887 3489999999999887764 56655211111 024556666644558
Q ss_pred ccEEE-EcC--CCHHHHHHHHHHhccCCceEEEEc
Q 016978 265 VDYSF-ECI--GNVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 265 ~d~vi-d~~--g~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
||+|| |+. -.+..++.++.+|+++ |.++.=.
T Consensus 133 fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 133 FDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred ccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 99998 432 2367899999999996 8777443
No 177
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.73 E-value=0.0025 Score=55.34 Aligned_cols=101 Identities=25% Similarity=0.324 Sum_probs=66.7
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHH----HhcCCceE-eCCCCCCchHHHHHHH
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRA----KNFGVTEF-VNPKDHDKPIQQVLVD 259 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-~vi~v~~~~~~~~~~----~~lg~~~v-~~~~~~~~~~~~~i~~ 259 (379)
+++...++||++||-+|+| .|+.++-+++..|.. +|+.++..++-.+.+ +.++.+.+ +...+ . ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g-----~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--G-----SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G-----GGT
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--h-----hhc
Confidence 4566779999999999986 588999999988853 699999888655444 34566432 22222 1 011
Q ss_pred hcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 260 LTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 260 ~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
... ++||.|+-+.+-+..-...++.|+++ |++|..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 122 38999998877766667888999997 999863
No 178
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.73 E-value=0.02 Score=56.14 Aligned_cols=80 Identities=24% Similarity=0.343 Sum_probs=51.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hH-HHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCc
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~--~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
.+|+++||+|+ |++|..+++.+...|+ +|+++++.+ ++ .+...+++...+ .|..+ .......+.... .+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCC
Confidence 36889999988 9999999999999999 888887643 22 233344554332 34333 122222222222 2379
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++|+++|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999883
No 179
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.72 E-value=0.014 Score=45.07 Aligned_cols=92 Identities=26% Similarity=0.287 Sum_probs=61.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcC----C-ce-EeCCCCCCchHHHHHHHhcCCCcc
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFG----V-TE-FVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg----~-~~-v~~~~~~~~~~~~~i~~~~~~g~d 266 (379)
||++||-+|+|. |..++.+++. .++ +|++++.+++-.+.+++.- . +. -+...+ + . ......+++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d----~-~-~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD----A-E-FDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC----C-H-GGTTTSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc----c-c-cCcccCCCCC
Confidence 689999999863 7777888884 567 8999999999888877532 1 11 121222 2 1 1111122799
Q ss_pred EEEEcC-CC---------HHHHHHHHHHhccCCceEEE
Q 016978 267 YSFECI-GN---------VSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 267 ~vid~~-g~---------~~~~~~~~~~l~~~~G~iv~ 294 (379)
+|+... .. ...++.+.+.|+++ |+++.
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 999876 22 12478899999996 99875
No 180
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.011 Score=51.96 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=52.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
++|+|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++...+ .|..+ ...+.+.+.....+++|++|.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57899988 9999999888888999 89999988877665555433222 23222 12333444444334799999887
Q ss_pred CC
Q 016978 273 GN 274 (379)
Q Consensus 273 g~ 274 (379)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 54
No 181
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.70 E-value=0.018 Score=50.29 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=68.6
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCchHHHHHH
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 258 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~ 258 (379)
+.+...+++|++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 4566678999999999886 47777888888763 389999999887766654 44432 222221 0000
Q ss_pred HhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 259 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
...+.||.|+-...........++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 11237999876555556677888999997 998764
No 182
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.024 Score=50.50 Aligned_cols=101 Identities=22% Similarity=0.260 Sum_probs=61.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHHH----HHhcCCce-E--eCCCCCCchHHHHHHHhcC--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~~~~----~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~-- 262 (379)
+++++||+|+ |.+|..++..+...|+ +|+++.++.+ +.+. ++..+... . .|..+ ..+....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4689999998 9999999998888999 7888777543 3222 22233321 1 23332 1233333333221
Q ss_pred CCccEEEEcCCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 016978 263 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 263 ~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+++|+++.++|.. ..++.+...+..+ |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 2345555555664 88888865
No 183
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.69 E-value=0.0056 Score=51.38 Aligned_cols=101 Identities=21% Similarity=0.235 Sum_probs=65.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC-CCCC--------------CchHHHHHHH
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDH--------------DKPIQQVLVD 259 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~-~~~~--------------~~~~~~~i~~ 259 (379)
..+|+|+|+|.+|+.|+.+++.+|+ +++..+...++.+..+..+...+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3889999999999999999999999 8999999999888888887755432 1110 1223333333
Q ss_pred hcCCCccEEEEcCC-----CHHH-HHHHHHHhccCCceEEEEccC
Q 016978 260 LTDGGVDYSFECIG-----NVSV-MRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 260 ~~~~g~d~vid~~g-----~~~~-~~~~~~~l~~~~G~iv~~g~~ 298 (379)
... .+|+||-+.- .+.+ -++.++.|+++ ..++++...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 221 4788885321 1222 36677788885 888888653
No 184
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.011 Score=52.99 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~g~d~v 268 (379)
+|++|||+|+ |.+|..+++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ...+...+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 899998887765443 34444222 23332 122222333221 1368999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
+.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 185
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.03 Score=50.60 Aligned_cols=78 Identities=22% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .+.+... + .|..+ ..++...+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 899998887654322 2223222 1 23322 133333343332 23
Q ss_pred CccEEEEcCC
Q 016978 264 GVDYSFECIG 273 (379)
Q Consensus 264 g~d~vid~~g 273 (379)
++|++|.++|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998876
No 186
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.024 Score=53.24 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+....+.... .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4689999988 9999999999999999 899988888765533 33454332 23333 122333332221 24
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 187
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.62 E-value=0.037 Score=55.07 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=39.4
Q ss_pred hccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 016978 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~ 235 (379)
...+.+.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4456678999999998 9999999999989999 899988988876543
No 188
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.029 Score=50.36 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
+|.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++ .+... . .|..+ ...+...+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4789999988 9999999888888999 78888787776544433 33322 1 22222 122333333322 247
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 189
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.015 Score=51.69 Aligned_cols=77 Identities=29% Similarity=0.425 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE-eCCCCCCchHHHHHHHhcCCCccEEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~i~~~~~~g~d~vid 270 (379)
.++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+. ..+...+ .|..+ .....+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence 4689999998 9999999999999999 8999988887665443 3444332 23332 1222222222 237999999
Q ss_pred cCCC
Q 016978 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 190
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.029 Score=50.59 Aligned_cols=79 Identities=30% Similarity=0.387 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-E--eCCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... + .|..+ ..++.+.+.+.. .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999999999999999 899998887755433 4444322 2 23332 123333333321 23689
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 191
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.58 E-value=0.015 Score=52.91 Aligned_cols=101 Identities=24% Similarity=0.348 Sum_probs=63.2
Q ss_pred hhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce--EeCCCCCCchHHHHHH
Q 016978 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLV 258 (379)
Q Consensus 185 ~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~i~ 258 (379)
.+.+++++++|++||-+|+| -|-.+..+|+..|+ +|+++..+++..+.++ +.|... .+...+ + +
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~ 122 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R 122 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence 35788899999999999987 56777788888899 9999999999887765 455421 111111 1 1
Q ss_pred HhcCCCccEEEEc-----CCC---HHHHHHHHHHhccCCceEEEEcc
Q 016978 259 DLTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 259 ~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++. +.||.|+.. .|. +..+..+.+.|+|+ |++++-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 221 278987753 332 46689999999997 99885543
No 192
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.56 E-value=0.015 Score=50.55 Aligned_cols=101 Identities=20% Similarity=0.198 Sum_probs=67.5
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCc---eEeCCCCCCchHHHHH
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQVL 257 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~i 257 (379)
+.+...++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.++ ..+.. .++..+. .+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~-----~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG-----KRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc-----ccCC
Confidence 3466678899999999886 4777788888775 238999999988666554 34432 2222221 1111
Q ss_pred HHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 258 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
. ..+.||.|+-+.........+++.|+++ |+++..
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 0 1237999887666556667888999997 998764
No 193
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.55 E-value=0.0093 Score=54.60 Aligned_cols=126 Identities=27% Similarity=0.381 Sum_probs=69.4
Q ss_pred cCcceEecCCCCCccccccccccchhhhhh-hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 016978 156 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (379)
Q Consensus 156 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~ 234 (379)
+.+.++.|.+.+.+-... ..+|.... ++.. -..+|++||=+|+| .|.+++..+ .+|+++|++++.++...+.
T Consensus 127 ~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~-~~~~g~~vLDvG~G-SGILaiaA~-klGA~~v~a~DiDp~Av~~ 199 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGH----HPTTRLCLELLEK-YVKPGKRVLDVGCG-SGILAIAAA-KLGAKKVVAIDIDPLAVEA 199 (295)
T ss_dssp TTSEEEEESTTSSS-SSH----CHHHHHHHHHHHH-HSSTTSEEEEES-T-TSHHHHHHH-HTTBSEEEEEESSCHHHHH
T ss_pred CCcEEEEECCCCcccCCC----CHHHHHHHHHHHH-hccCCCEEEEeCCc-HHHHHHHHH-HcCCCeEEEecCCHHHHHH
Confidence 345566676665443332 22222211 1121 26789999998874 244444333 4599899999998876555
Q ss_pred HHh----cCCce-E-eCCCCCCchHHHHHHHhcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEccCC
Q 016978 235 AKN----FGVTE-F-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 235 ~~~----lg~~~-v-~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+++ .|... + +.... + ...+.||+|+--+-.. ..++.+.+.++++ |.+++.|...
T Consensus 200 a~~N~~~N~~~~~~~v~~~~---~-------~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 200 ARENAELNGVEDRIEVSLSE---D-------LVEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp HHHHHHHTT-TTCEEESCTS---C-------TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred HHHHHHHcCCCeeEEEEEec---c-------cccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 543 23222 1 21111 1 1125899999655443 3455666779996 9999988764
No 194
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.011 Score=53.28 Aligned_cols=82 Identities=26% Similarity=0.232 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC-c--eE--eCCCCCCchHHHHHHHhc--C
Q 016978 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-T--EF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 191 ~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~-~--~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
..-++.++||+|+ |.+|..++..+...|+ +|+.++++++..+.+.+... . .+ .|..+ ...+.+.+.+.. .
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 3457899999988 9999999999999999 79999888776555443221 1 12 22222 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|+||+++|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 379999998875
No 195
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.014 Score=51.47 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-H---HHhcCCceE-eCCCCCCchHHHHHHHhc--CCCc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-R---AKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~-~---~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+ . +...+...+ .|..+ ..++...+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999988 9999999998888899 7999988765532 2 222333222 22222 122323233221 2379
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|+|++++|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998774
No 196
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.49 E-value=0.014 Score=56.18 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
-.+.+|||+|+|.+|.+++.-+...|+.+++++.++.+|.+.+ .+++...++.++ .+.+.. ..+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--------~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS--------ELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH--------HHHHHh-ccCCEEEEC
Confidence 4678999999999999999999999987899999998775444 445422222221 122221 258999999
Q ss_pred CCCHHHH
Q 016978 272 IGNVSVM 278 (379)
Q Consensus 272 ~g~~~~~ 278 (379)
++.++.+
T Consensus 250 T~a~~~v 256 (414)
T PRK13940 250 VNVLEYI 256 (414)
T ss_pred cCCCCee
Confidence 9986543
No 197
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.49 E-value=0.011 Score=53.41 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCce-E--eCCCCCCchHHHHHHHhcC--CCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~~--~g~d 266 (379)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999999999999 899998888776655543 3221 1 22222 1223333333221 3689
Q ss_pred EEEEcCC
Q 016978 267 YSFECIG 273 (379)
Q Consensus 267 ~vid~~g 273 (379)
++++++|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
No 198
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.022 Score=49.98 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
+++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+... ..|..+ ...+.+.+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899987 9999998888878899 8999988888777666665432 223333 133333333333337999999876
Q ss_pred C
Q 016978 274 N 274 (379)
Q Consensus 274 ~ 274 (379)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 199
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.016 Score=51.94 Aligned_cols=80 Identities=20% Similarity=0.264 Sum_probs=53.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eEe--CCCCCCchHHHHHHHhc--C
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
..+++|||+|+ |.+|..++..+...|+ +|+++.+++++.+.+.+ .+.. .++ |..+ ..++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 45799999988 9999999999999999 89999888877654432 1221 222 2222 133333333321 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+.+|++|++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
No 200
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.016 Score=51.89 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--E--eCCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
++++|||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... . .|..+ ...+...+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999998888999 8999988877655554432221 2 22222 122333333221 13789
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
+++.++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 201
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.45 E-value=0.021 Score=53.24 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCCce----EeCCCCCCchHHHHHHHhcCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTE----FVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~----v~~~~~~~~~~~~~i~~~~~~ 263 (379)
.|+++||+|+ +++|...+..+...|+ +|+.+++++++++.+.+ .+... ..|..+...+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4899999998 9999998888888899 89999999887654422 11111 223322112334444444444
Q ss_pred -CccEEEEcCCC
Q 016978 264 -GVDYSFECIGN 274 (379)
Q Consensus 264 -g~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799988763
No 202
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.019 Score=52.97 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--ceE---eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~--~~v---~~~~~~~~~~~~~i~~~~--~~g 264 (379)
+|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999999999 899998988776543 44542 111 23332 122333333322 247
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 203
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.016 Score=52.27 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+... + .|..+ .....+.+.+.. .+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999989999 89999888776543322 23221 2 23332 122222233221 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 204
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.43 E-value=0.018 Score=51.90 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce-Ee--CCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++... ++ |..+ ..+....+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 9999999999999999 89999898877665543 33211 22 2222 122333333322 23799
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 205
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.02 Score=51.51 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCCceE--e--CCCCCCchHHHHHHHh
Q 016978 192 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF--V--NPKDHDKPIQQVLVDL 260 (379)
Q Consensus 192 ~~~g~~VlI~Ga-g-~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v--~--~~~~~~~~~~~~i~~~ 260 (379)
+.+++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ ++...+ + |..+ ..+....+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 445799999987 6 799999999999999 78888887766544322 443222 2 3322 12233333322
Q ss_pred c--CCCccEEEEcCCC
Q 016978 261 T--DGGVDYSFECIGN 274 (379)
Q Consensus 261 ~--~~g~d~vid~~g~ 274 (379)
. .+++|++|+++|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 2479999999884
No 206
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.40 E-value=0.026 Score=47.23 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=63.8
Q ss_pred cccccccchhhhhhhhhccCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 016978 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 172 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
....|+...++...+.+...--.|++|||+|+|. +|..++..++..|+ +|+.+.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~-------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK-------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence 3455555455544333333346799999999986 59989999999999 7888866522
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.+. .+|+||.+++.++.+.. +.++++ -.++.++.+
T Consensus 80 -~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 80 -NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred -hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 1212221 48999999998764433 346664 677777764
No 207
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.04 Score=49.02 Aligned_cols=79 Identities=24% Similarity=0.195 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+... ++ |..+ ..++...+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 888888877755433 2233322 22 3322 122222222221 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 208
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.022 Score=51.69 Aligned_cols=78 Identities=27% Similarity=0.313 Sum_probs=52.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE--eCCCCCCchHHHHHHHhc--CCCccEE
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~--~~g~d~v 268 (379)
+.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..++.+.+.+.. .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 679999988 9999999998888999 788888888776544 34441222 23333 133333333322 2479999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
++++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 209
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.025 Score=51.14 Aligned_cols=79 Identities=20% Similarity=0.327 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c----CCce-E--eCCCCCCchHHHHHHHhc-CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTE-F--VNPKDHDKPIQQVLVDLT-DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~-v--~~~~~~~~~~~~~i~~~~-~~ 263 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ + +.+. . .|..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4789999988 9999999999999999 89999888776544332 1 3221 2 23332 123333333322 24
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 210
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.34 E-value=0.021 Score=56.60 Aligned_cols=73 Identities=27% Similarity=0.300 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
+.+|++|+|+|.|..|++++.+++..|+ +|++.+..+++.+.++++|+..+ .... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEEC
Confidence 5578999999999999999999999999 89999987776666777887443 2211 11111 147999988
Q ss_pred CCCH
Q 016978 272 IGNV 275 (379)
Q Consensus 272 ~g~~ 275 (379)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 7763
No 211
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.33 E-value=0.0085 Score=58.78 Aligned_cols=93 Identities=15% Similarity=0.126 Sum_probs=61.6
Q ss_pred hccCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCchHHHHHHHhc
Q 016978 188 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 188 ~~~~~~~g~~Vl----I~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~ 261 (379)
...++++|+.+| |+|+ |++|.+++|+++.+|+ .|+++...+.+....+..+.+ .+++.+. ..+.+.+...+
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence 456788899988 8865 9999999999999999 888886666544443444444 3455443 22333332221
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.++...+..+.++ |+++.++..
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEccc
Confidence 3456667777775 888887654
No 212
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.33 E-value=0.076 Score=45.68 Aligned_cols=104 Identities=22% Similarity=0.331 Sum_probs=63.2
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCchHHHHHHH
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~ 259 (379)
+....++.++++||=+|+| .|..++.+++.....+|++++.+++..+.+++ ++... ++.. +..+.+..
T Consensus 32 l~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~-----d~~~~~~~ 105 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG-----SAPECLAQ 105 (196)
T ss_pred HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC-----chHHHHhh
Confidence 3455667889999888774 34455566665433489999999988776653 45432 2221 12222222
Q ss_pred hcCCCccE-EEEcCCC-HHHHHHHHHHhccCCceEEEEcc
Q 016978 260 LTDGGVDY-SFECIGN-VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 260 ~~~~g~d~-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.. ..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus 106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22 12344 4443222 46788999999997 99887743
No 213
>PRK00811 spermidine synthase; Provisional
Probab=96.32 E-value=0.025 Score=51.77 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=63.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce---EeCCCC---CCchHHHHHHHhcCCCccE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE---FVNPKD---HDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~---v~~~~~---~~~~~~~~i~~~~~~g~d~ 267 (379)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... .++... ...+..+.+.. ..+.+|+
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~yDv 153 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE-TENSFDV 153 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh-CCCcccE
Confidence 468999998864 666777777767779999999999888887632100 000000 01233334443 3448999
Q ss_pred EEEcCCC----------HHHHHHHHHHhccCCceEEEE
Q 016978 268 SFECIGN----------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
||--... .++++.+.+.|+++ |.++..
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 8853211 34567888999997 998865
No 214
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.024 Score=51.58 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-e-E--eCCCCCCchHHHHHHHhcC--CCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-E-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~-v--~~~~~~~~~~~~~i~~~~~--~g~d 266 (379)
.+++|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.... . . .|..+ .......+..... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999988 9999999999888999 899999988877655543221 1 1 23322 1223333333221 3689
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999886
No 215
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.29 E-value=0.011 Score=53.77 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=39.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+|++|||+|||+.+.+++.-+...|+.+++++.++.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 58999999999999999999999998899999999988666654
No 216
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.28 E-value=0.035 Score=48.06 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..+++.+..+|..+++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46899999999999999999999999899999876
No 217
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.022 Score=51.02 Aligned_cols=79 Identities=20% Similarity=0.224 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce---EeCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.|+++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. +.+... ..|..+ ...+.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999999999999 8999988877654433 223222 123322 123333333322 24
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998774
No 218
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.26 E-value=0.24 Score=42.97 Aligned_cols=93 Identities=22% Similarity=0.159 Sum_probs=59.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... .+..+.+.|- ..+...+... +. + .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~~~---~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG-ITWLARCFDA---DI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC-EEEEeCCCCH---HH---h--CCcEEEEECC
Confidence 47899999999999999999999999 8888865432 2223333332 1121222111 11 1 3699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 016978 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.+..-..+....+.. |..|....
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECC
Confidence 9866555566666664 88776544
No 219
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.26 E-value=0.018 Score=51.24 Aligned_cols=79 Identities=23% Similarity=0.303 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcC--Cce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg--~~~-v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
++.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. .+. ... ++ |..+ ...+...+.+.. .+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999988 9999999988888899 7999999887655432 222 111 22 2222 133333333321 237
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+||.++|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 220
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.26 E-value=0.032 Score=49.14 Aligned_cols=104 Identities=25% Similarity=0.293 Sum_probs=74.2
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHh
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~ 260 (379)
+..+.++.||++|+=.|.| .|.+++-||++.|. .+|+..+..++..+.+++ +|....+.... .| +++.
T Consensus 86 I~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~D----v~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GD----VREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--cc----cccc
Confidence 4567789999999988875 58888889998875 699999999988877764 34333111111 12 2222
Q ss_pred cCC-CccEEE-EcCCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 261 TDG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 261 ~~~-g~d~vi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
..+ .+|.|| |.--..+.++.+.+.|+++ |.++.+..
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 223 688755 7666678899999999997 99998854
No 221
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.24 E-value=0.028 Score=50.06 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCCc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
.|++|||+|+ |.+|...+..+...|+ +|+.+++++. ..+.+++++... + .|..+ ..++...+.+.. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4789999988 9999999999989999 8998877652 223344445322 2 22222 233333333322 1369
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 222
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.22 E-value=0.046 Score=48.24 Aligned_cols=93 Identities=18% Similarity=0.201 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhH--------HHHHHhcCCceEeCCCCCCchHHHHHH
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~--~vi~v~~~----~~~--------~~~~~~lg~~~v~~~~~~~~~~~~~i~ 258 (379)
-.+.+|+|+|+|+.|..++..+...|.+ +++.++++ .++ .++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l- 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEAL- 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHH-
Confidence 4678999999999999999988899997 89999988 443 33445443211 0 0 1233333
Q ss_pred HhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 259 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.++|++|++++...+-...++.+.++ ..+..+..
T Consensus 96 ----~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn 129 (226)
T cd05311 96 ----KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN 129 (226)
T ss_pred ----hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC
Confidence 14899999987433234666777774 66655544
No 223
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.22 E-value=0.037 Score=50.68 Aligned_cols=44 Identities=27% Similarity=0.352 Sum_probs=38.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
..+++|+|+|+|+.|.+++..+..+|+++|+.++++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35689999999999999999999999988999999988766543
No 224
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.20 E-value=0.012 Score=44.96 Aligned_cols=89 Identities=21% Similarity=0.191 Sum_probs=58.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +..++ .-... . ..+ . ..-.++++|+-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~--~i~~~-~----~~~----~-~~l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEG--LIQLI-R----REF----E-EDLDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHT--SCEEE-E----SS-----G-GGCTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhh--HHHHH-h----hhH----H-HHHhhheEEEecCC
Confidence 57899999999999999999999999 899987764 21221 11111 1 112 1 11137999999998
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCC
Q 016978 274 NVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.+..-..+....+. .|.++......
T Consensus 70 d~~~n~~i~~~a~~-~~i~vn~~D~p 94 (103)
T PF13241_consen 70 DPELNEAIYADARA-RGILVNVVDDP 94 (103)
T ss_dssp -HHHHHHHHHHHHH-TTSEEEETT-C
T ss_pred CHHHHHHHHHHHhh-CCEEEEECCCc
Confidence 87766666666666 49998886643
No 225
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.20 E-value=0.22 Score=43.12 Aligned_cols=91 Identities=12% Similarity=0.011 Sum_probs=56.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-H-HHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
.|.+|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ..+.... +. ...-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~----~~----~~~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE----FE----PSDIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC----CC----hhhcCCceEEEEc
Confidence 57899999999999999988888998 8888865321 2 222222 21 1111111 00 0001268999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++.+. ++..+...+.. +.++....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 98865 66666655564 66666644
No 226
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.18 E-value=0.012 Score=51.56 Aligned_cols=101 Identities=20% Similarity=0.259 Sum_probs=66.1
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCchHHHHHH
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 258 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~ 258 (379)
+.+...++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ +|.+. ++..+. .+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~-----~~~~- 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG-----TQGW- 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc-----ccCC-
Confidence 4556678899999999885 46677778887653 369999999887766653 44432 221111 1100
Q ss_pred HhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 259 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
...+.||+|+-..........+.+.|+++ |+++..
T Consensus 142 -~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 -EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred -cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 01237998885544445567788999997 998764
No 227
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.035 Score=49.98 Aligned_cols=79 Identities=24% Similarity=0.348 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c--CCc-eEe--CCCCCCchHHHHHHHhc-CCCc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F--GVT-EFV--NPKDHDKPIQQVLVDLT-DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l--g~~-~v~--~~~~~~~~~~~~i~~~~-~~g~ 265 (379)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +.. +.+ |..+ .....+.+.... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4688999987 9999999998888999 89999888876654432 2 211 122 2222 122222222221 2478
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998875
No 228
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.03 Score=49.90 Aligned_cols=79 Identities=27% Similarity=0.316 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc-eE--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. +.+.. +. .|..+ .......+.+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4688999988 9999999998888999 8999988876543332 12221 11 23222 122222222221 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|+||+++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998883
No 229
>PRK06484 short chain dehydrogenase; Validated
Probab=96.17 E-value=0.065 Score=53.55 Aligned_cols=103 Identities=26% Similarity=0.367 Sum_probs=68.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceE---eCCCCCCchHHHHHHHhc--CCCc
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v---~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
..|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.... .|..+ ..+....+.+.. .+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 46789999988 9999999999999999 89999998877665543 444321 23332 123333333322 2479
Q ss_pred cEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 016978 266 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 266 d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
|++|+++|.. .+.+.++..++.+ |+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988741 1134445556664 899988764
No 230
>PRK06128 oxidoreductase; Provisional
Probab=96.16 E-value=0.064 Score=49.50 Aligned_cols=102 Identities=19% Similarity=0.187 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh------HHHHHHhcCCceE---eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK------KFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~------~~~~~~~lg~~~v---~~~~~~~~~~~~~i~~~~-- 261 (379)
.|++|||+|+ |++|..++..+...|+ +|+.+.++.+ ..+.+++.|.... .|..+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999998888999 7777654332 1223344454332 12222 122233333222
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 016978 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+++|++|+++|.. .+++.++..+.++ |+++.++..
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 23799999988731 1234445556675 898887654
No 231
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.16 E-value=0.039 Score=50.15 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=65.8
Q ss_pred ccccccchhhhhhhhhccC-CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 016978 173 CLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 173 a~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~-vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
..+||+....+. +++..+ --.|++|+|+|.|. +|.-+++++...|+ +|+.+.+...
T Consensus 136 ~~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------- 193 (286)
T PRK14175 136 TFVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------- 193 (286)
T ss_pred CCCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch--------------------
Confidence 345665444444 344444 34799999999965 99999999999999 7887744221
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.++ .+|+||-++|.+..+.. ..++++ ..++.+|..
T Consensus 194 -~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 194 -DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred -hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 1222222 48999999999876665 458886 888888874
No 232
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.03 Score=50.16 Aligned_cols=74 Identities=16% Similarity=0.113 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce-E--eCCCCCCchHHHHHHHhcCCCcc
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~~~g~d 266 (379)
+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++ .+... + .|..+ . +.+.+...+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 468999988 9999999999999999 88888887765544332 33221 1 23322 1 123333334799
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 233
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.14 E-value=0.039 Score=50.02 Aligned_cols=79 Identities=24% Similarity=0.306 Sum_probs=57.4
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhHHHHHH-----hcCCc---eEeCCCCCCchHHHHHHHhcC
Q 016978 193 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVT---EFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~-a~~la~~~g~~~vi~v~~~~~~~~~~~-----~lg~~---~v~~~~~~~~~~~~~i~~~~~ 262 (379)
+.|++.+|+|+ .++|.+ |-+||+ .|. +|+.++|+++|++..+ +.++. +++|..+.+. ..+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 45799999998 899987 566666 999 8999999999987654 34431 2456655333 4556666666
Q ss_pred C-CccEEEEcCCC
Q 016978 263 G-GVDYSFECIGN 274 (379)
Q Consensus 263 ~-g~d~vid~~g~ 274 (379)
+ .+-++++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6 78889999886
No 234
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.14 E-value=0.19 Score=41.60 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
.|.+|||+|+|.+|.--++.+...|+ +|++++ ++..+.+++++.-. ..... + .+..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~----~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----F----SNDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----c----ChhcCCCceEEEECCC
Confidence 57999999999999999988888999 788773 33323334454211 11111 1 1111127899999988
Q ss_pred CHHHHHHHHHHhccCCceEEEE
Q 016978 274 NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
..+ .+..+..+++. +.++..
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEE
Confidence 855 77777666664 444444
No 235
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.12 E-value=0.033 Score=49.62 Aligned_cols=78 Identities=21% Similarity=0.359 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhcC--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 263 (379)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 899998887665433 2334432 2 22222 1233333333222 3
Q ss_pred CccEEEEcCC
Q 016978 264 GVDYSFECIG 273 (379)
Q Consensus 264 g~d~vid~~g 273 (379)
++|.+|+++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 236
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.032 Score=51.38 Aligned_cols=79 Identities=24% Similarity=0.336 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |++|...++.+...|+ +|++++++.++.+.+. +.+.+. ++ |..+ ..++.+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3589999988 9999999998888899 8999999887655443 233322 22 2222 123333333221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 237
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.034 Score=49.48 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCCceE---eCCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
++++|||+|+ |.+|..+++.+...|+ +|+++++++++.+. .++++.... .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999999999999 89999888766543 344554321 22222 122222222221 23789
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 238
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.08 E-value=0.02 Score=52.32 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=50.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCce-EeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
.+++|||+|+|+.|.+++.-+..+|+++|+++.++.+|.+.+. .++... +.... ..+.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 5789999999999999999999999989999999988766554 333211 11010 001111111 268999999
Q ss_pred CCC
Q 016978 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 775
No 239
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.07 E-value=0.063 Score=49.79 Aligned_cols=91 Identities=22% Similarity=0.384 Sum_probs=62.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
.+|.|+|+|.+|...+..++..|. .+|+++++++++.+.+++.|...... .+..+.+ ..+|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 679999999999999998888884 37999999999888888887532111 1111111 258999999876
Q ss_pred HH---HHHHHHHHhccCCceEEEEcc
Q 016978 275 VS---VMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 275 ~~---~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.. .+......++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 33 233334455664 66666654
No 240
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.039 Score=49.53 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC--c-eE--eCCCCCCchHHHHHHHhc--CCCc
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--T-EF--VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~--~-~v--~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
+.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +.. + .. .|..+ ..++.+.+.+.. .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999988 9999999988888899 89999888877654432 221 1 11 23322 133333333322 2368
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998773
No 241
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.06 E-value=0.046 Score=46.70 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCCCccE
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~ 267 (379)
++++++||-+|+| .|..++.+++.....+|++++.+++..+.+++ .+.+.+ .... .+..+ +. . .+.+|+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~-~-~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FG-Q-EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CC-C-CCCccE
Confidence 4458999999875 35556666665543499999999887766653 444321 1111 12211 11 1 237999
Q ss_pred EEEcCCC--HHHHHHHHHHhccCCceEEEE
Q 016978 268 SFECIGN--VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~g~--~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+-.... ...+..+.+.|+++ |+++.+
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~ 144 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLAL 144 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 9853222 46788899999997 999877
No 242
>PRK06196 oxidoreductase; Provisional
Probab=96.06 E-value=0.042 Score=51.10 Aligned_cols=79 Identities=20% Similarity=0.219 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE--eCCCCCCchHHHHHHHhc--CCCccE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~--~~g~d~ 267 (379)
.+.+|||+|+ |++|..++..+...|+ +|+++++++++.+.+ .++..-.. .|..+ ..+..+.+.+.. .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4689999988 9999999998888999 899998887765433 22221122 23322 123333333322 247999
Q ss_pred EEEcCCC
Q 016978 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|+++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 243
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.05 E-value=0.035 Score=50.42 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc------eEeCCCCC--CchHHHHHHHh
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT------EFVNPKDH--DKPIQQVLVDL 260 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~------~v~~~~~~--~~~~~~~i~~~ 260 (379)
.|+.+||+|+ .++|.+++..+...|+ +|+.+++++++.+..++ .+.. .+.|..+. ...+.+...+.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 5789999987 9999999999999999 99999999887654432 2322 12222221 12233334344
Q ss_pred cCCCccEEEEcCCC
Q 016978 261 TDGGVDYSFECIGN 274 (379)
Q Consensus 261 ~~~g~d~vid~~g~ 274 (379)
..++.|++++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 45689999998775
No 244
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.032 Score=50.26 Aligned_cols=79 Identities=27% Similarity=0.336 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-c-CCce---EeCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-F-GVTE---FVNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~-l-g~~~---v~~~~~~~~~~~~~i~~~~-- 261 (379)
.|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. + . +... ..|..+ ..+..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999999999999 8999989887654332 1 1 1111 123333 123333333322
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999884
No 245
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.034 Score=49.95 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHhcCCceE---eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~----~~~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|+|+|+ |.+|..+++.+...|+++|+++++++++.+ .+++.+.... .|..+ ...+.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999988 999999999999999944999988766544 2233444321 23322 122333333321 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 246
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.02 E-value=0.054 Score=47.89 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCceE-eCCCCCCchHHHHHHHhcC--CCccEEE
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~g~d~vi 269 (379)
++++||+|+ |++|..+++.+...|+ +|+.+++++++ .+.+++.++..+ .|..+ ..+....+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999988 9999999998888999 88888876643 344445554322 23222 1233333333322 3699999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 247
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.01 E-value=0.075 Score=45.94 Aligned_cols=47 Identities=43% Similarity=0.604 Sum_probs=40.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV 240 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~ 240 (379)
-.|.+|+|+|.|.+|..+++.+...|+ +|++++.++++.+.+.+ +|+
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 467899999999999999999999999 89999998887666554 464
No 248
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.99 E-value=0.03 Score=48.26 Aligned_cols=98 Identities=20% Similarity=0.310 Sum_probs=61.7
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCchHHHHHHHhc-C
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT-D 262 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~-~ 262 (379)
+.....++.+||-+|+|. |..+..+|+. |. +|++++.+++-.+.+++. +...+ .... .++ .... .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cCh----hhCCcC
Confidence 344455778999998863 7777788875 77 999999998876665542 22211 0000 111 1111 2
Q ss_pred CCccEEEEcCC----C----HHHHHHHHHHhccCCceEEEEc
Q 016978 263 GGVDYSFECIG----N----VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 263 ~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+.+|+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999987533 1 35577888889997 9965543
No 249
>PLN02366 spermidine synthase
Probab=95.99 E-value=0.073 Score=49.19 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCC---CchHHHHHHHhcCCCccE
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~---~~~~~~~i~~~~~~g~d~ 267 (379)
...++|||+|.|. |.++..+++.-+..+|++++.+++-.+.++++-... .++.... ..+..+.+++...+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568999998865 556678888766668999999988788887642210 0100000 123444454443447999
Q ss_pred EEEcCCC----------HHHHHHHHHHhccCCceEEEEc
Q 016978 268 SFECIGN----------VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 268 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 296 (379)
||--... .++++.+.++|+++ |.++..+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 8743222 35688999999997 9997653
No 250
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.97 E-value=0.035 Score=54.71 Aligned_cols=78 Identities=31% Similarity=0.402 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHhcCCceEeCCCCCCc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~ 251 (379)
..+++|+|+|+|+.|+.++..++..|+ .|+.++..+ ...+.++++|++..++..-. .
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~ 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-R 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-C
Confidence 368999999999999999999999999 788887653 24567788998765543211 1
Q ss_pred hHHHHHHHhcCCCccEEEEcCCCH
Q 016978 252 PIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 252 ~~~~~i~~~~~~g~d~vid~~g~~ 275 (379)
++ .+.... .++|.||.++|..
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCC
Confidence 11 111111 2699999999974
No 251
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.041 Score=49.24 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+.+. ++ |..+ .......+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999998889999 8999988877655432 234332 22 2222 122222233221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 252
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.97 E-value=0.035 Score=49.73 Aligned_cols=79 Identities=29% Similarity=0.387 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+ ..++.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999998888899 899998887654332 2233222 12 3322 133333333322 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 253
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.96 E-value=0.064 Score=49.02 Aligned_cols=44 Identities=25% Similarity=0.256 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
..+++|||+|+|+.|.+++.-+..+|++++++++++.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999998888899989999999988765554
No 254
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.95 E-value=0.043 Score=48.55 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++.+|||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+.... .|..+ ...+...+.+.. .+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3578999998 9999999999888999 799998887764433 33443322 23322 223333333322 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|.++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998865
No 255
>PRK06194 hypothetical protein; Provisional
Probab=95.93 E-value=0.04 Score=50.33 Aligned_cols=79 Identities=24% Similarity=0.331 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh---cCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~---lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |.+|..++..+...|+ +|++++++.++.+.+ .+ .+... ++ |..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999988 9999999998888999 899998876654433 22 23322 12 2222 123333333221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 256
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.92 E-value=0.023 Score=47.23 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=49.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhHHH-H---HHhcCCceE-eC--CCCCCchHHHHHHHhc--CC
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFD-R---AKNFGVTEF-VN--PKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~--~~~~~-~---~~~lg~~~v-~~--~~~~~~~~~~~i~~~~--~~ 263 (379)
++|||+|+ +++|...++.+...|..+|+.+.++ .++.+ + +++.+.... +. ..+ ..++...+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 47899988 9999998888888877688888888 34333 2 233453222 21 111 233444444433 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998886
No 257
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.92 E-value=0.046 Score=48.99 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~g~d~v 268 (379)
.++++||+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999988 9999999999988999 6776644 3444444444343222 23332 123333333322 2379999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 258
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.045 Score=49.81 Aligned_cols=79 Identities=24% Similarity=0.296 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 788888877655432 2234322 1 22222 122333333221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 259
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.049 Score=48.75 Aligned_cols=79 Identities=22% Similarity=0.229 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce---EeCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++|||+|+ |.+|...+..+...|+ +|+.+++++++.+.+.+ .+... ..|..+ ...+...+.+.. .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999889999 89999888776544322 23221 223322 123333333322 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++|.++|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998864
No 260
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.89 E-value=0.037 Score=49.60 Aligned_cols=78 Identities=19% Similarity=0.308 Sum_probs=49.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
.|+++||+|++ ++|.++++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899999998888999 8888877754444444442211 1 22222 122333333322 247
Q ss_pred ccEEEEcCC
Q 016978 265 VDYSFECIG 273 (379)
Q Consensus 265 ~d~vid~~g 273 (379)
+|++++++|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999877
No 261
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.89 E-value=0.041 Score=56.49 Aligned_cols=75 Identities=29% Similarity=0.355 Sum_probs=55.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHhcCCceEeCCCCC-Cc
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 251 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~-~~ 251 (379)
.+++|+|+|+|+.|+.+++.+...|+ +|++++..+. +.++++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 4577788998766554321 11
Q ss_pred hHHHHHHHhcCCCccEEEEcCCC
Q 016978 252 PIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 252 ~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
.+. ++. .++|.||.++|.
T Consensus 388 ~~~----~l~-~~~DaV~latGa 405 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGT 405 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCC
Confidence 221 121 268999999887
No 262
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.88 E-value=0.045 Score=49.72 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=50.1
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHH----HHHHhcCCceEe--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~----~~~~~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.++++||+|++ ++|.+.++.+...|+ +|+.++++++.. ++.+++|....+ |..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 57899999984 899999999999999 888887765322 222334543322 3332 123333333322 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+.+|++++++|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999998873
No 263
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.046 Score=48.85 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++...+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999988888899 899998887654322 3334322 2 22222 122223222221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 264
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.86 E-value=0.043 Score=49.17 Aligned_cols=79 Identities=20% Similarity=0.360 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCCc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++. ..+.+++.+.+. . .|..+ ..+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4789999988 9999999999999999 8888876542 123334455432 1 23333 133333333321 2479
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998874
No 265
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.85 E-value=0.028 Score=51.38 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
..+++|||+|+|++|.+++..+...|+.+|++++++.++.+.+. .++....+.. + .+. .+. -..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~----~~~-~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LEL----QEE-LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccc----hhc-cccCCEEEEC
Confidence 45789999999999999999999999669999999988765554 3332100101 0 000 010 1268999999
Q ss_pred CCC
Q 016978 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
++.
T Consensus 193 Tp~ 195 (278)
T PRK00258 193 TSA 195 (278)
T ss_pred CcC
Confidence 775
No 266
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.069 Score=47.92 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=49.7
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhH-HHH----HHhcCC-c-eEe--CCCCCCchHHHHHHHh
Q 016978 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FDR----AKNFGV-T-EFV--NPKDHDKPIQQVLVDL 260 (379)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g-~~~vi~v~~~~~~-~~~----~~~lg~-~-~v~--~~~~~~~~~~~~i~~~ 260 (379)
+..+.+|||+|+ |++|..+++-+...| + +|+++++++++ .+. +++.+. + +++ |..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999988 999999888766664 7 88888887764 332 233332 1 222 3322 12333333333
Q ss_pred cC-CCccEEEEcCCC
Q 016978 261 TD-GGVDYSFECIGN 274 (379)
Q Consensus 261 ~~-~g~d~vid~~g~ 274 (379)
.. +++|+++.++|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999887765
No 267
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.84 E-value=0.075 Score=48.46 Aligned_cols=130 Identities=25% Similarity=0.339 Sum_probs=74.4
Q ss_pred CcceEecCCCCCccccccccccchhhhhhhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 016978 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (379)
Q Consensus 157 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~ 235 (379)
...+++|.+.+-+- .....+|++. |... ...++|.+||=+|+| .|.+++- |..+|+.+|+++|.++-..+.+
T Consensus 129 ~~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~DiDp~AV~aa 201 (300)
T COG2264 129 DELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVDIDPQAVEAA 201 (300)
T ss_pred CceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEecCCHHHHHHH
Confidence 35666676665332 3334444433 2211 135699999999884 3544443 4456887999999988665555
Q ss_pred Hh----cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEccCC
Q 016978 236 KN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 236 ~~----lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
++ .+........ .........++.+|+|+-.+=. ..+.++....++++ |++++.|...
T Consensus 202 ~eNa~~N~v~~~~~~~-----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 202 RENARLNGVELLVQAK-----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred HHHHHHcCCchhhhcc-----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 43 3443210000 0000111222489998853321 24567788889997 9999998754
No 268
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.83 E-value=0.039 Score=49.52 Aligned_cols=78 Identities=26% Similarity=0.289 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce---EeCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~i~~~~--~~g 264 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++...+...+ .+.+. ..|..+ ..+..+.+.+.. .+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999999989999 89998887543333332 34332 123332 123333333322 237
Q ss_pred ccEEEEcCC
Q 016978 265 VDYSFECIG 273 (379)
Q Consensus 265 ~d~vid~~g 273 (379)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999887
No 269
>PRK08589 short chain dehydrogenase; Validated
Probab=95.83 E-value=0.047 Score=49.56 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
+++++||+|+ +++|...++.+...|+ +|++++++++..+.+++ .+... . .|..+ ..+....+.+.. .+.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4789999988 9999999988888999 89998887433333333 23221 1 23322 123333333322 236
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++++++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998764
No 270
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.83 E-value=0.054 Score=48.65 Aligned_cols=79 Identities=25% Similarity=0.404 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhcC--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 263 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ...+...+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999998888999 8999988877655443 223221 1 23332 1233333333211 3
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|.++.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 271
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.82 E-value=0.05 Score=48.79 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHhcCCceE-e--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+. +++.+.... + |..+ ...+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 78888888765432 233454332 1 2222 122222222221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 272
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.13 Score=47.25 Aligned_cols=80 Identities=19% Similarity=0.214 Sum_probs=48.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-H----HHHHhcCCce-Ee--CCCCCCchHHHHHHHhc--
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-F----DRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~-~----~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~-- 261 (379)
.++.++||+|+ |.+|...+..+...|+ +|+.+.+++++ . +.++..+... ++ |..+ ...+.+.+.+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 35789999988 9999998888888899 78888765422 1 2223334322 22 2222 122323333321
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+++|++|.++|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 1368999998774
No 273
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.039 Score=48.90 Aligned_cols=80 Identities=25% Similarity=0.345 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce----EeCCCCC-C---chHHHHHHHh
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE----FVNPKDH-D---KPIQQVLVDL 260 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~----v~~~~~~-~---~~~~~~i~~~ 260 (379)
++++|+|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+... ..|..+. . ..+.+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4689999988 9999999988888999 8999999887655432 222111 1222110 1 1233334443
Q ss_pred cCCCccEEEEcCCC
Q 016978 261 TDGGVDYSFECIGN 274 (379)
Q Consensus 261 ~~~g~d~vid~~g~ 274 (379)
..+.+|++|+++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999998884
No 274
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.076 Score=47.70 Aligned_cols=77 Identities=23% Similarity=0.255 Sum_probs=51.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cC-Cc-eE--eCCCCCCchHHHHHHHhc---CCCcc
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG-VT-EF--VNPKDHDKPIQQVLVDLT---DGGVD 266 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg-~~-~v--~~~~~~~~~~~~~i~~~~---~~g~d 266 (379)
+++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ ++ .. ++ .|..+ ..++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999988 9999999998888999 89999888887655533 32 11 12 23332 133333333321 34799
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
+++.++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999875
No 275
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.80 E-value=0.056 Score=48.98 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=69.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC--
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI-- 272 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~-- 272 (379)
..+|.|+|.|.+|.-++.+|..+|+ +|+..+.+.+|+..+..+....+........++.+.+. ++|++|.++
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence 3467777999999999999999999 99999999999988887554443222221234433332 478888642
Q ss_pred CC---H-HHHHHHHHHhccCCceEEEEccCC
Q 016978 273 GN---V-SVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 273 g~---~-~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
++ | -..++..+.|+++ +.+|++....
T Consensus 242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 11 2 2357778999997 9999887644
No 276
>PRK08317 hypothetical protein; Provisional
Probab=95.79 E-value=0.094 Score=46.25 Aligned_cols=101 Identities=26% Similarity=0.358 Sum_probs=68.8
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhc----CCce-EeCCCCCCchHHHHHHHh
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~i~~~ 260 (379)
.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. +... +...+. ..+ ..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DGL-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--ccC-----CC
Confidence 4566788999999999975 888889998874 34899999999988887764 1111 111111 000 12
Q ss_pred cCCCccEEEEcC------CCHHHHHHHHHHhccCCceEEEEc
Q 016978 261 TDGGVDYSFECI------GNVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 261 ~~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
..+.+|+|+-.. .....+..+.++|+++ |.++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 234789887531 1245788999999997 9998764
No 277
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.068 Score=47.38 Aligned_cols=79 Identities=16% Similarity=0.137 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. +.+... ++ |..+ ...+...+.+.. .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999987 9999999999999999 8999999877654432 223222 22 2222 123333333322 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 278
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.79 E-value=0.12 Score=45.16 Aligned_cols=102 Identities=21% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeC--------CCCCCchHHHHHHHhc-
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVN--------PKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~--------~~~~~~~~~~~i~~~~- 261 (379)
..++.+||+.|+| .|.-++.||. .|. .|++++.++.-.+.+. +.+...... ....-.-+...+.+..
T Consensus 32 ~~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 3577899999986 5777888875 699 8999999998777642 233211000 0000000000111111
Q ss_pred --CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 016978 262 --DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 262 --~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+.||.|+|+..- ...+..+.++|+++ |++++++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999997531 34588999999997 98776655
No 279
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.049 Score=48.52 Aligned_cols=79 Identities=22% Similarity=0.251 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc--CCce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~l--g~~~-v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+... ++ +... ++ |..+ .....+.+.+.. .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4679999988 9999999988888899 8999988876544332 22 3221 22 2222 122323333221 137
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+++.++|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 280
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.073 Score=46.96 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+ ++.+.+. .+ |..+ ..+..+.+.+.. .+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999998888888999 899998888765433 2334332 12 2222 123333333321 23
Q ss_pred -CccEEEEcCC
Q 016978 264 -GVDYSFECIG 273 (379)
Q Consensus 264 -g~d~vid~~g 273 (379)
.+|++|+++|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999986
No 281
>PRK08643 acetoin reductase; Validated
Probab=95.77 E-value=0.053 Score=48.53 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999988 9999999999999999 8999988876654332 223222 1 22222 123333333322 247
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 282
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.058 Score=48.99 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=50.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCce-E--eCCCCCCchHHHHHHHhc--CCCccEE
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~--~~g~d~v 268 (379)
++|||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++. +... + .|..+ ...+.+.+.+.. .+++|+|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999988 9999999988888899 899998988776655442 2221 1 22222 122333333321 2378999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|+++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 283
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.067 Score=47.86 Aligned_cols=73 Identities=21% Similarity=0.305 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceE--eCCCCCCchHHHHHHHhcCCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~g~d~vi 269 (379)
.|+++||+|+ |++|..+++.+...|+ +|+++++++ ++.+.... +.... .|..+ .+ .+.+.. +.+|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~~---~~~~~~-~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--EE---SLDKQL-ASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--HH---HHHHhc-CCCCEEE
Confidence 3689999988 9999999999999999 888887765 32222111 11122 22222 11 222222 3699999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
No 284
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.03 Score=50.62 Aligned_cols=76 Identities=26% Similarity=0.371 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEEE
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~g~d~vid 270 (379)
+++|+|+|+ |.+|...++.+...|+ +|++++++.++.+... +... ..|..+ ..++...+.+.. .+.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD-DASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEEE
Confidence 568999988 9999999998888999 8999988766543221 2222 123322 233444444332 237999999
Q ss_pred cCCC
Q 016978 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9884
No 285
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.065 Score=49.84 Aligned_cols=79 Identities=20% Similarity=0.172 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.|++++|+|+ +++|..++..+...|+ +|+.+.+++++.+.+. ++ +... + .|..+ ..+..+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999998888999 8998888877654322 11 1111 1 23332 122222222221
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+.+|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2379999998774
No 286
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.75 E-value=0.066 Score=48.37 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=52.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHhcCC-c-eEeCCCCCCchHHHHHHHhcC--C
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNFGV-T-EFVNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~----~~~~~~~lg~-~-~v~~~~~~~~~~~~~i~~~~~--~ 263 (379)
-.|+.|||+|+ +++|.+.++=...+|+ +++..+.+.+ ..+.+++.|- . .+.|-++ .++.....++... |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 36899999988 9999998888888898 7878776553 3445555551 1 1333332 2444444333332 3
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998774
No 287
>PRK04457 spermidine synthase; Provisional
Probab=95.73 E-value=0.12 Score=46.66 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCc----e--EeCCCCCCchHHHHHHHhcCCCc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT----E--FVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~----~--v~~~~~~~~~~~~~i~~~~~~g~ 265 (379)
.+.++||++|.|+ |.++..+++.....++++++.+++-.+.+++. +.. . ++. .+..+.+.+. .+.+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-----~Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-----ADGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-----CCHHHHHHhC-CCCC
Confidence 3567899999863 77888888877545899999999999988874 211 1 121 2344444433 3479
Q ss_pred cEEE-EcCC---------CHHHHHHHHHHhccCCceEEE
Q 016978 266 DYSF-ECIG---------NVSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 266 d~vi-d~~g---------~~~~~~~~~~~l~~~~G~iv~ 294 (379)
|+|+ |... ..+++..+.+.|+++ |.++.
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 9877 4322 147789999999997 99886
No 288
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.06 Score=48.36 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ +... + .|..+ ..++...+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 8999888877654332 22 2211 1 23222 123333333321
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+.+|++++++|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999998874
No 289
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.061 Score=48.41 Aligned_cols=102 Identities=18% Similarity=0.282 Sum_probs=62.4
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHH----HHHHhcCCceEe--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~----~~~~~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++.. ++.++++....+ |..+ ..+..+.+.... .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 47899999873 899999998888999 888887775432 222334432332 2222 123333333322 2
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhccCCceEEEEccC
Q 016978 263 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 263 ~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+.+|++++++|.. + ..+.++..++.+ |+++.++..
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~ 150 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYY 150 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecc
Confidence 4799999987631 0 134455667665 888877653
No 290
>PRK09242 tropinone reductase; Provisional
Probab=95.72 E-value=0.061 Score=48.22 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----c--CCce-E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----l--g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.|+++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+.+ . +.+. . .|..+ ..++...+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 89999888776544332 1 2222 1 22222 122333333221
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+++|+++.++|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999874
No 291
>PRK09186 flagellin modification protein A; Provisional
Probab=95.72 E-value=0.067 Score=47.82 Aligned_cols=78 Identities=22% Similarity=0.397 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc----CCce----EeCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE----FVNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l----g~~~----v~~~~~~~~~~~~~i~~~~-- 261 (379)
++++|||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ .++ +... ..|..+ ...+.+.+.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 888888887765433 222 2221 123332 233333344322
Q ss_pred CCCccEEEEcCC
Q 016978 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~g~d~vid~~g 273 (379)
.+++|+++++++
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 236899999875
No 292
>PLN02476 O-methyltransferase
Probab=95.70 E-value=0.096 Score=47.49 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=68.4
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhc-
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~- 261 (379)
...+..+.++||=+|.+ +|..++++|+.++. .+|+.++.+++..+.+++ .|..+-+.... .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHh
Confidence 34456678999999874 57778888888752 379999999988777754 56543222111 23344444431
Q ss_pred ---CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 016978 262 ---DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ---~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.||.||--... ...+..++..++++ |.++.=
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 2379998844333 45688899999996 887743
No 293
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.061 Score=48.09 Aligned_cols=78 Identities=21% Similarity=0.263 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+... ++ |..+ ...+.+.+.+.. .+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 578999988 9999999999999999 89999888766544332 23222 22 2222 123333333322 236
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++++++|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 294
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.69 E-value=0.082 Score=45.41 Aligned_cols=76 Identities=26% Similarity=0.307 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c----CCceE-eCCCCCCchHHHHHHHhcCCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTEF-VNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~v-~~~~~~~~~~~~~i~~~~~~g~d 266 (379)
++.+++|+|+ |.+|..++..+...|+ +|+.++++.++.+.+.+ + +.... .+..+ ..++.+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcCC
Confidence 5789999987 9999998888888898 89999888877654432 2 22211 11211 12222222 2589
Q ss_pred EEEEcCCCHH
Q 016978 267 YSFECIGNVS 276 (379)
Q Consensus 267 ~vid~~g~~~ 276 (379)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999877644
No 295
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.064 Score=48.25 Aligned_cols=78 Identities=21% Similarity=0.338 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhcC--CC
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--GG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~g 264 (379)
+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... ++ |..+ ...+...+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 357999988 9999999999889999 899998887654432 2234322 11 2222 1333333333321 36
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+||+++|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 296
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.087 Score=46.27 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=49.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..++.+.+.+.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 5899988 9999999999988999 899898888776544 34444332 23332 123333333332 26899998765
No 297
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.67 E-value=0.17 Score=44.83 Aligned_cols=104 Identities=20% Similarity=0.278 Sum_probs=72.7
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc----e--EeCCCCCCchHHHHHHHh
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----E--FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~----~--v~~~~~~~~~~~~~i~~~ 260 (379)
....+..+|++||=+|+| .|-+|..+++..|-.+|+++|.+++-++.+++--.+ . .+..+. . .+ .+
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dA--e----~L-Pf 115 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDA--E----NL-PF 115 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEech--h----hC-CC
Confidence 344456689999988765 688999999999866999999999988877753222 1 111111 0 11 12
Q ss_pred cCCCccEEEEcCCC------HHHHHHHHHHhccCCceEEEEccCC
Q 016978 261 TDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 261 ~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.+..||+|.-+.|- +..++++.+.|+|+ |+++.+....
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 33378988876553 46799999999997 9998886643
No 298
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.049 Score=48.68 Aligned_cols=75 Identities=23% Similarity=0.318 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCCccE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g~d~ 267 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++ ...+... + .|..+ ..++.+.+.... .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4789999988 9999999999988999 89998887654 1122211 1 23222 123333333321 236899
Q ss_pred EEEcCCC
Q 016978 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|.++|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
No 299
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.064 Score=47.90 Aligned_cols=78 Identities=21% Similarity=0.238 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc-eEe--CCCCCCchHHHHHHHhcC--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EFV--NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v~--~~~~~~~~~~~~i~~~~~--~ 263 (379)
++++|||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+.. ..+ |..+ ..+....+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999988 9999999999999999 8999988876554332 22322 122 2222 1223333333221 3
Q ss_pred CccEEEEcCC
Q 016978 264 GVDYSFECIG 273 (379)
Q Consensus 264 g~d~vid~~g 273 (379)
.+|++++++|
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 300
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.2 Score=44.41 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=60.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHH----HHHHhcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~----~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
++.++||+|+ |.+|..++..+...|+ +++.+.++. ++. +.+++.+... .+ |..+ ..+..+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5689999988 9999999999999999 676665533 222 2223334322 22 2222 122323333221 2
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 016978 263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 263 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+++|++|.++|.. ..++.++..++.. |+++.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 4799999988741 1133445555665 889888754
No 301
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.64 E-value=0.07 Score=49.66 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=60.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
+|||+|+ |-+|..++..+...|. +|+++.++.++...+...+...+. |..+ ...+ .+.. .++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~l----~~al-~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PETL----PPSF-KGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHHH----HHHH-CCCCEEEECCCC
Confidence 6999998 9999999999988999 899998887766555555654432 2222 1222 2222 268999998763
Q ss_pred HH------------HHHHHHHHhccC-CceEEEEccC
Q 016978 275 VS------------VMRAALECCHKG-WGTSVIVGVA 298 (379)
Q Consensus 275 ~~------------~~~~~~~~l~~~-~G~iv~~g~~ 298 (379)
.. ....+++.++.. -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 10 113344555543 1378877663
No 302
>PRK05717 oxidoreductase; Validated
Probab=95.64 E-value=0.07 Score=47.81 Aligned_cols=79 Identities=23% Similarity=0.332 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCCce-E--eCCCCCCchHHHHHHHhcC--CCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~g~d 266 (379)
.|++|||+|+ |.+|..++..+...|+ +|+.+++++++.+. .++++... . .|..+ ..+..+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999998888999 89888877665443 34444322 1 22222 1223222333222 3689
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|.++|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 303
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.07 Score=48.50 Aligned_cols=78 Identities=19% Similarity=0.230 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC--c-eEe--CCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--T-EFV--NPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~--~-~v~--~~~~~~~~~~~~i~~~~-- 261 (379)
.++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ..+. . +++ |..+ ..++.. +.+..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHh
Confidence 3578999988 9999999998888999 8999888776654432 2221 1 122 3332 233333 33332
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+++|+++.++|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 1378999998874
No 304
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.067 Score=47.92 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-H-HHH---HHhcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDR---AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~-~~~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ +++|..+++.+...|+ +|+.++++++ . .+. +++.+... .+ |..+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4789999988 9999999999999999 8888877543 2 222 23334322 22 2222 123333333322 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
No 305
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.62 E-value=0.069 Score=49.79 Aligned_cols=78 Identities=21% Similarity=0.217 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC---Cc-eE--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VT-EF--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg---~~-~v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ .++. .. .+ .|..+ .......+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4689999988 9999999998888898 899998887765433 2332 11 11 23322 122222233321 23
Q ss_pred CccEEEEcCC
Q 016978 264 GVDYSFECIG 273 (379)
Q Consensus 264 g~d~vid~~g 273 (379)
.+|++|+++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 306
>PLN02253 xanthoxin dehydrogenase
Probab=95.62 E-value=0.06 Score=49.00 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCC--c-eE--eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~--~-~v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+. ..+++. . +. .|..+ ...+.+.+.... .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999999988888899 89988887665433 233321 1 11 23322 122333333222 137
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++++++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998864
No 307
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.62 E-value=0.061 Score=51.32 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
-.+.+|||+|+|-+|..++.-+...|..+|+++.++.+|. ++++++|+. ++..++ ..+.+. .+|+||-+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence 4789999999999999999999999988999999988875 567788853 222221 222221 48999999
Q ss_pred CCCHHHH---HHHHHHhccCCc-eEEEEccC
Q 016978 272 IGNVSVM---RAALECCHKGWG-TSVIVGVA 298 (379)
Q Consensus 272 ~g~~~~~---~~~~~~l~~~~G-~iv~~g~~ 298 (379)
++.++.+ ......++.... -+++++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 8875421 222233333213 45667664
No 308
>PRK07985 oxidoreductase; Provisional
Probab=95.61 E-value=0.16 Score=46.77 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~--~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
+++++||+|+ |++|..+++.+...|+ +|+.+.++. ++.+.+ ++.+... . .|..+ ..+....+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5689999988 9999999999999999 788775432 222222 2334322 1 23322 123333333332
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 016978 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+++|+++++.|.. .+++.++..+..+ |++|.++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 23789999887631 1234444555665 899888654
No 309
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.072 Score=47.91 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
++.++||+|+ |.+|...+..+...|+ +|+.++++++..+.+++ .+... . .|..+ ..+....+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999999988999 89999887754443332 23321 1 22222 122333333221 237
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998883
No 310
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.075 Score=49.12 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.|++|||+|+ |++|..+++.+...|+ +|+.+.++.++.+.+ +++ +... + .|..+ ..+..+.+.+..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5789999988 9999999998888899 888888887664322 111 1211 2 23222 123333333332
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+++|++|+++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2379999998873
No 311
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.076 Score=48.14 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=48.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce----EeCCCCCCchHHHHHHHhc--CCCc
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~----v~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899988 9999999999888999 788888877664433 2334322 123332 122222222221 2369
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++|+++|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 312
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.57 E-value=0.25 Score=41.08 Aligned_cols=88 Identities=20% Similarity=0.263 Sum_probs=55.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCH
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 275 (379)
.+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+..+ + +..+.+.+ .|+||-|..+.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~------s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D------SPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S------SHHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h------hhhhHhhc-----ccceEeecccc
Confidence 368899999999999998889999 89999999999988888775322 1 12222222 57777777775
Q ss_pred HHHHHHHH------HhccCCceEEEEcc
Q 016978 276 SVMRAALE------CCHKGWGTSVIVGV 297 (379)
Q Consensus 276 ~~~~~~~~------~l~~~~G~iv~~g~ 297 (379)
......+. .+.++ ..++.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 54444333 34443 45555544
No 313
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.57 E-value=0.074 Score=47.63 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCce-Ee--CCCCCCchHHHHHHHhc--CCCc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
.|+++||+|+ |++|.++++.+...|+ +|+.+++.+. ..+.+++++... .+ |..+ ..+..+.+.+.. .+.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4789999988 9999999999999999 8888765432 223334444322 12 2222 123333333322 2379
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 314
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.57 E-value=0.1 Score=46.38 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=67.1
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhc-
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~- 261 (379)
...+..+.++||-+|.| .|..++.+++.++ ..+|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHh
Confidence 34456678899999874 5777777787764 4499999999988777764 44432111111 23334444432
Q ss_pred ---CCCccEEEEcCC---CHHHHHHHHHHhccCCceEEEE
Q 016978 262 ---DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ---~~g~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.||+||--.. -...+..++..++++ |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999884332 245688889999996 887754
No 315
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.57 E-value=0.096 Score=46.65 Aligned_cols=35 Identities=34% Similarity=0.477 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..+++.+..+|..+++.+|.+
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35789999999999999999999999899988754
No 316
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.56 E-value=0.087 Score=47.88 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=57.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC---CceEeCCCCCCchHHHHHHHhcCCCccE
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~i~~~~~~g~d~ 267 (379)
...+++++|+|+|++|.+++..+...|+ +|+++++++++.+.+ +.+. ....+..+ +.....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----------~~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD-----------ELPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh-----------hhcccCccE
Confidence 3457899999999999999988888898 899998887765433 3332 11111111 111126899
Q ss_pred EEEcCCCHH--HH---HHHHHHhccCCceEEEEc
Q 016978 268 SFECIGNVS--VM---RAALECCHKGWGTSVIVG 296 (379)
Q Consensus 268 vid~~g~~~--~~---~~~~~~l~~~~G~iv~~g 296 (379)
||+|++... .. ......++++ ..++.+.
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~ 214 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV 214 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence 999987631 01 1123446664 5666553
No 317
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.081 Score=47.38 Aligned_cols=78 Identities=27% Similarity=0.351 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCc--eE--eCCCCCCchHHHHHHHhc--CCCcc
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--EF--VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~--~v--~~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++... ++ .|..+ ...+...+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 568999988 9999998888888898 8999988877655433 23211 12 22222 122223333321 13689
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 318
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.54 E-value=0.063 Score=47.96 Aligned_cols=79 Identities=24% Similarity=0.303 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+... . .|..+ ...+.+.+.... .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4679999988 9999999998888899 8999988877654332 223322 1 22222 123333333321 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 319
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.54 E-value=0.069 Score=47.47 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHhcCCce-Ee--CCCCCCchHHHHHHHhcC--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~----~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~ 263 (379)
.+.+|||+|+ |.+|...+..+...|+ +|++++++.++.+. +++.+... ++ |..+ ...+.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4679999988 9999999988888899 89999888654332 23333322 22 2222 1233333333221 3
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|+|+.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998755
No 320
>PRK06398 aldose dehydrogenase; Validated
Probab=95.54 E-value=0.043 Score=49.38 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~g~d~vi 269 (379)
.|+++||+|+ +++|...+..+...|+ +|+.+++++++.. .... ..|..+ ..+..+.+.+.. .+.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999988 9999999999999999 8998887765422 1111 123332 123333333322 23699999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 321
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.54 E-value=0.08 Score=47.23 Aligned_cols=76 Identities=20% Similarity=0.343 Sum_probs=50.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceE---eCCCCCCchHHHHHHHhcC--CCccEEE
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v---~~~~~~~~~~~~~i~~~~~--~g~d~vi 269 (379)
+|+|+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ ++.... .|..+ ...+.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899988 9999999999989999 89999998877665543 343321 22222 1233333333221 3799999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98764
No 322
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.066 Score=48.08 Aligned_cols=77 Identities=21% Similarity=0.290 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCCce-Ee--CCCCCCchHHHHHHHhcCCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTE-FV--NPKDHDKPIQQVLVDLTDGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~-v~--~~~~~~~~~~~~i~~~~~~g 264 (379)
.++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ .+... ++ |..+ ..++...+... +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CC
Confidence 4789999988 9999999998888999 89999888776544321 23221 22 2222 12333333322 47
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 323
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.08 Score=48.01 Aligned_cols=78 Identities=24% Similarity=0.369 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc---C--Cc-eEe--CCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G--VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l---g--~~-~v~--~~~~~~~~~~~~i~~~~-- 261 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .++ + .. .++ |..+ ..++...+.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999998 9999999999999999 899998877654322 222 1 11 122 2222 123333333322
Q ss_pred CCCccEEEEcCC
Q 016978 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~g~d~vid~~g 273 (379)
.+++|++|+++|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 137899999887
No 324
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.086 Score=46.90 Aligned_cols=77 Identities=17% Similarity=0.283 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----c--CCce-E--eCCCCCCchHHHHHHHhc--C
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVTE-F--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----l--g~~~-v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ . +... + .|..+ ...+...+.+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 568999988 9999998888888898 89888888876554322 1 2211 2 23332 133333333332 2
Q ss_pred CCccEEEEcCC
Q 016978 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~g~d~vid~~g 273 (379)
+++|++|+++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999886
No 325
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.51 E-value=0.086 Score=48.40 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
.++++||+|+|++|.+++..+...|+++|+++++++
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999999999999888899997799998885
No 326
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.51 E-value=0.083 Score=47.33 Aligned_cols=79 Identities=29% Similarity=0.409 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCce-Ee--CCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++... .+ |..+ .......+.+.. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3678999988 9999999999998999 8999988887665443 333221 12 2222 123333333321 23689
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 327
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.062 Score=47.31 Aligned_cols=74 Identities=23% Similarity=0.250 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhcCC-CccEEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~-g~d~vid 270 (379)
.+++|||+|+ |.+|...++.+...|+ +|+++.++.++ ...... ..|..+ ...+.+.+.+.... +.|++|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3678999988 9999999999889998 89999887654 111111 123322 12333334443333 6899999
Q ss_pred cCCC
Q 016978 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
++|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 328
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.49 E-value=0.083 Score=47.46 Aligned_cols=76 Identities=24% Similarity=0.301 Sum_probs=49.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe--CCCCCCchHHHHHHHhc--CCCccE
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--~~g~d~ 267 (379)
++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +.+..+.+ |..+ ..+..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899988 9999999999988999 8999988877654332 22322222 2222 123333333322 247999
Q ss_pred EEEcCCC
Q 016978 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|+++|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 329
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.49 E-value=0.15 Score=44.66 Aligned_cols=101 Identities=17% Similarity=0.148 Sum_probs=61.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---------eCCCCCCchHHHHHHHh
Q 016978 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---------VNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v---------~~~~~~~~~~~~~i~~~ 260 (379)
.+.++.+||+.|+| .|.-++.||. .|+ .|++++.++.-.+.+. +.+.... ....+. .-+...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence 45678899999886 5777777775 799 8999999998777652 3332210 000000 0000001111
Q ss_pred ---cCCCccEEEEcCC--------CHHHHHHHHHHhccCCceEEEEc
Q 016978 261 ---TDGGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 261 ---~~~g~d~vid~~g--------~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
..+.||.|+|... ....+..+.++|+++ |++.++.
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~ 155 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT 155 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 1136899999653 135588999999997 9755543
No 330
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.47 E-value=0.096 Score=46.86 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++...+.+.. .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5889999988 9999999988888899 899998887654432 2334322 1 23222 123333333322 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 331
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.47 E-value=0.052 Score=47.05 Aligned_cols=101 Identities=21% Similarity=0.308 Sum_probs=65.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhc----C
Q 016978 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT----D 262 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~----~ 262 (379)
...-++||-+|.+ +|+.++++|+.+.- .+|+.++.++++.+.+++ .|...-+.... .+..+.+.++. .
T Consensus 43 ~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTTT
T ss_pred hcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccCC
Confidence 3445899999985 68889999998742 399999999998887754 45432121111 23344444432 2
Q ss_pred CCccEEE-EcCCC--HHHHHHHHHHhccCCceEEEEc
Q 016978 263 GGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 263 ~g~d~vi-d~~g~--~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+.||.|| |+.-. ...+..++.+++++ |.++.=.
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699988 54322 34578888999996 7776543
No 332
>PRK08264 short chain dehydrogenase; Validated
Probab=95.47 E-value=0.062 Score=47.48 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-Ee--CCCCCCchHHHHHHHhcCCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~~g~d~vi 269 (379)
.+.+|||+|+ |.+|..+++.+...|+++|++++++.++.+. .+... ++ |..+ ...+.+.+... +.+|+||
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 4688999987 9999999999999998678888887766543 22221 22 2222 12233333222 2589999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
.++|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 333
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.15 Score=44.43 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=46.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCC-CchHHHHHHHhcCCCccEEEEc
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~-~~~~~~~i~~~~~~g~d~vid~ 271 (379)
..++||+|+ |.+|..++..+... + +|++++++.++.+.+.+ ....+++..+-. ...+.+.+... ++.|.+|.+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEEC
Confidence 368999988 99999888777666 6 89999888776554442 211222222211 12222222221 269999999
Q ss_pred CCC
Q 016978 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 875
No 334
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.46 E-value=0.093 Score=47.75 Aligned_cols=102 Identities=14% Similarity=0.259 Sum_probs=64.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHH-HHHhcCCceE--eCCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~~---~~~-~~~~lg~~~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.++++++ +.+ ..++++.... .|..+ .......+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4789999987 4899999998888999 8888877742 222 2234454322 33333 123333333332 2
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhccCCceEEEEccC
Q 016978 263 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 263 ~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+.+|++++++|.. + ..+..+..+.++ |+++.++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999988731 0 245556667775 999988654
No 335
>PRK06720 hypothetical protein; Provisional
Probab=95.46 E-value=0.11 Score=43.70 Aligned_cols=79 Identities=27% Similarity=0.281 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHh--cCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDL--TDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~--~~~ 263 (379)
.+.+++|+|+ +++|...+..+...|+ +|+.++++++..+.. ++.+... ++ |..+ ..++.+.+.+. ..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 8999999888888898 899998876654322 2234332 22 2211 12222222221 124
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68888888764
No 336
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.06 Score=48.90 Aligned_cols=78 Identities=18% Similarity=0.205 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce-Ee--CCCCCCchHHHHHHHhc--CCCccE
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g~d~ 267 (379)
+++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+ ++... .+ |..+ ...+...+.... .+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999988 9999999988888898 89999888877655543 22211 12 2222 123333333321 237899
Q ss_pred EEEcCCC
Q 016978 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
++.++|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999875
No 337
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.42 E-value=0.18 Score=45.34 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=66.1
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhcCCCc
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~g~ 265 (379)
+....+.++++||=+|+| .|..+..+++..+..+|++++.+++-.+.+++..... ++.. +.... .....+
T Consensus 24 l~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-----d~~~~---~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-----DIASW---QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-----chhcc---CCCCCc
Confidence 444566788999999885 4666778887765449999999999888887643221 2211 11110 112379
Q ss_pred cEEEEcCCC------HHHHHHHHHHhccCCceEEEE
Q 016978 266 DYSFECIGN------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 266 d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+|+-...- ...+..+.+.|+++ |+++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 998854331 35688899999997 998875
No 338
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.42 E-value=0.11 Score=48.89 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
.+.+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998899898753
No 339
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.41 E-value=0.068 Score=42.96 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=29.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
..+|+|.|+|++|..++..+-..|..+++.+|..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999899999754
No 340
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.41 E-value=0.14 Score=41.47 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
+|+|+|+|++|...+..+...|.++++.++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999889999754
No 341
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.39 E-value=0.12 Score=45.09 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999889999876
No 342
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.39 E-value=0.1 Score=50.04 Aligned_cols=90 Identities=29% Similarity=0.386 Sum_probs=54.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh--cCCce---EeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 198 VAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN--FGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 198 VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~--lg~~~---v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+... .+|..+ ..+ +.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~-l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PES-LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HHH-HHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HHH-HHHHHh-cCCEEEEC
Confidence 7889999999999999887764 389999999999766653 22211 233322 222 444333 46999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEE
Q 016978 272 IGNVSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~ 294 (379)
+|.......+-.|+..+ -.++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 99854444555555554 55555
No 343
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.38 E-value=0.11 Score=46.57 Aligned_cols=79 Identities=20% Similarity=0.331 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... . .|..+ ...+...+.... .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4789999988 9999999999888999 899998887664432 2223222 1 22222 123333333221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 344
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.38 E-value=0.16 Score=45.99 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=85.9
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC---------CchHHHHHHH
Q 016978 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---------DKPIQQVLVD 259 (379)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~---------~~~~~~~i~~ 259 (379)
.+..-++.+||+.|+|..|+.++-.++..|+ .|...+-...+.+..+++|+..+-..++. +.+|...-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3445677889999999999999999999999 88888888888888888888543222211 3344443333
Q ss_pred hcC---CCccEEEEcCCC-----HH-HHHHHHHHhccCCceEEEEccCCC-CcccccCcceeee-ccEEEeee
Q 016978 260 LTD---GGVDYSFECIGN-----VS-VMRAALECCHKGWGTSVIVGVAAS-GQEISTRPFQLVT-GRVWKGTA 321 (379)
Q Consensus 260 ~~~---~g~d~vid~~g~-----~~-~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~-~~~i~~~~ 321 (379)
+.. .++|+||-+.=- |. .-..+...++++ +.+|.+....+ +..+.-+...... +.+|.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 221 279999976422 22 246778889997 99999875433 2233222222222 77777754
No 345
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.38 E-value=0.22 Score=44.99 Aligned_cols=102 Identities=22% Similarity=0.311 Sum_probs=59.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHhcCCce-EeCCCCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTE-FVNPKDH 249 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-------------------~----~~~~~~lg~~~-v~~~~~~ 249 (379)
.+.+|+|+|+|++|..++..+-..|..+++.++...- | .+.++++..+. +....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4689999999999999999999999889999875421 1 11222233221 1111110
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
- ..+.+.++....+|+||||..+...-..+...+....=.++..|.
T Consensus 109 -i-~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 -I-TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred -c-ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 0 011222233336999999999855444455555553134454544
No 346
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.38 E-value=0.14 Score=45.81 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45899999999999999999999999889888754
No 347
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.38 E-value=0.034 Score=49.52 Aligned_cols=106 Identities=19% Similarity=0.288 Sum_probs=66.2
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCce-E-eCCCCC-CchHHHHH
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDH-DKPIQQVL 257 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~-v-~~~~~~-~~~~~~~i 257 (379)
+....++.||++||=.|.| .|-++..|++..| -.+|+..+.++++.+.+++ .|... + +...+. ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 5567789999999998764 4666777777776 3489999999998877753 55532 1 212220 0111
Q ss_pred HHhcCCCccEEE-EcCCCHHHHHHHHHHh-ccCCceEEEEcc
Q 016978 258 VDLTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVGV 297 (379)
Q Consensus 258 ~~~~~~g~d~vi-d~~g~~~~~~~~~~~l-~~~~G~iv~~g~ 297 (379)
.+.....+|.|| |--.....+..+.+.| +++ |+++.+..
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 111123688765 6655567899999999 886 99998854
No 348
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.37 E-value=0.092 Score=47.70 Aligned_cols=78 Identities=23% Similarity=0.289 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+. +.+... . .|..+ .......+.+.. .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999989999 8999888776543322 223321 1 22222 122333333322 24
Q ss_pred CccEEEEcCC
Q 016978 264 GVDYSFECIG 273 (379)
Q Consensus 264 g~d~vid~~g 273 (379)
.+|++|+++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 349
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.35 E-value=0.23 Score=38.49 Aligned_cols=74 Identities=24% Similarity=0.315 Sum_probs=53.3
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 016978 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 198 VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 276 (379)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|...+. -+. .-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~---~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDA---TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-T---TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccc---hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999665 899999999999999998865333 322 1122344432237899988887744
No 350
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.35 E-value=0.1 Score=48.94 Aligned_cols=35 Identities=34% Similarity=0.401 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35889999999999999999999999899999875
No 351
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.33 E-value=0.012 Score=48.32 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=57.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CchHHHHHHHhcCCCccEEEEcCC
Q 016978 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 198 VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~----~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
|+|+|+|++|.+.+..++..|. .|..+.+.+ +.+.+++.|........+. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888999 899998887 7777776664321111000 0000000 111237999999987
Q ss_pred CHH---HHHHHHHHhccCCceEEEEcc
Q 016978 274 NVS---VMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 274 ~~~---~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.+ .++.+...+.++ ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 633 344444445553 56776644
No 352
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.14 Score=45.32 Aligned_cols=75 Identities=16% Similarity=0.110 Sum_probs=48.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eE--eCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+.. .. .|..+ ..++.+.+.+.. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhcc-cCCCEEEEc
Confidence 57899988 9999998888888899 899999988887666543321 11 23322 233444444332 245776665
Q ss_pred CC
Q 016978 272 IG 273 (379)
Q Consensus 272 ~g 273 (379)
+|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 353
>PRK06484 short chain dehydrogenase; Validated
Probab=95.33 E-value=0.073 Score=53.22 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce---EeCCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 9999999999999999 899998888776544 4455432 223332 233333333322 24799
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998764
No 354
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.31 E-value=0.09 Score=47.14 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=49.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCc--eEe--CCCCCCchHHHHHHHhc--C
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT--EFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~----lg~~--~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+++|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. + .+.. +.+ |..+ ..+....+.+.. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 578999988 9999999998888999 8999988776543332 1 2211 122 2222 122333333321 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998874
No 355
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.31 E-value=0.23 Score=45.19 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=66.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eE-e-CCCCC--CchHHHHHHHhcCCCccEEE-
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF-V-NPKDH--DKPIQQVLVDLTDGGVDYSF- 269 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v-~-~~~~~--~~~~~~~i~~~~~~g~d~vi- 269 (379)
++|||+|.| -|-.+-.++++...++++.++.+++=.++++++-.. +. . |.+-. -.|-.+.+++... ++|+||
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 699999764 344555778888788999999999999999874321 10 0 11100 1344555655543 799877
Q ss_pred EcCCC---------HHHHHHHHHHhccCCceEEEE
Q 016978 270 ECIGN---------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 270 d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+.-. .++.+.+.++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 44332 67899999999996 999877
No 356
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.30 E-value=0.076 Score=54.73 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHhcCCceEeCCCCC-C
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~-~ 250 (379)
..+++|+|+|+|+.|+.++..+...|+ +|++++..+. ..+.++++|.+...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358999999999999999999999999 7888876532 3556677887544332110 0
Q ss_pred chHHHHHHHhcCCCccEEEEcCCC
Q 016978 251 KPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 251 ~~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
..+. .+. ..+|.||.++|.
T Consensus 404 i~~~-~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE-SLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHH-HHH----hcCCEEEEeCCC
Confidence 1111 111 268999998886
No 357
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.30 E-value=0.12 Score=47.25 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=55.8
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEE
Q 016978 192 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 192 ~~~g~~VlI~Gag~-vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid 270 (379)
--.|++|+|+|+|. +|...++++...|+ +|+.+.+..+ ++.+.+ ..+|+|+.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEE
Confidence 35789999999976 99999999999999 8888744211 111111 25899999
Q ss_pred cCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 271 CIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++|.+..+. .+.++++ ..++.+|..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998766443 3558885 888888764
No 358
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.30 E-value=0.1 Score=46.96 Aligned_cols=78 Identities=19% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE--eCCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.+ ++.|.... .|..+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 4 799999888888999 788877764222222 23343332 23333 123333333322 2
Q ss_pred CCccEEEEcCC
Q 016978 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~g~d~vid~~g 273 (379)
+.+|++++++|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 47999999876
No 359
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.29 E-value=0.26 Score=43.85 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=59.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHH----HHHHhcCCce-E--eCCCCCCchHHHHHHHhcC--C
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 263 (379)
+.+|||+|+ |.+|...+.-+...|+ +++.+.+ +.++. ..+++.+... . .|..+ ..++...+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 689999988 9999998888888999 6665543 32222 2233344322 2 23222 1223333333221 3
Q ss_pred CccEEEEcCCC----------H---------------HHHHHHHHHhccCCceEEEEccCC
Q 016978 264 GVDYSFECIGN----------V---------------SVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 264 g~d~vid~~g~----------~---------------~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
++|++|.++|. . ...+.+...++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 78999999873 1 1134455556675 8999887643
No 360
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.29 E-value=0.1 Score=46.33 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. +.+... ++ |..+ ...+.+.+.+.. .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999988999 8999988876654332 223222 22 2222 122333333322 13
Q ss_pred CccEEEEcCC
Q 016978 264 GVDYSFECIG 273 (379)
Q Consensus 264 g~d~vid~~g 273 (379)
++|++|.++|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 361
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.28 E-value=0.097 Score=46.66 Aligned_cols=78 Identities=26% Similarity=0.359 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
+++|||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+... + .|..+ ..++...+.+.. .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 358999988 9999999988888999 89999888776654433 22221 1 23322 123333333321 236
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
.|+||.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988764
No 362
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.27 E-value=0.1 Score=46.89 Aligned_cols=79 Identities=20% Similarity=0.207 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~---~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g 264 (379)
.+++|||+|+ |.+|...++.+...|+ +|+.+.++++..+ .+.+.+.+. + .|..+ .......+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999999999 7888877632112 222334322 1 23222 122323333322 236
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 363
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.26 E-value=0.21 Score=44.12 Aligned_cols=34 Identities=41% Similarity=0.545 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
..+|+|+|.|++|..++..+-..|..+++.+|..
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5789999999999999999999999899999764
No 364
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.25 E-value=0.58 Score=42.95 Aligned_cols=93 Identities=22% Similarity=0.277 Sum_probs=54.6
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEE-EcCChh--HHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 196 SIVAVFGLGTVGLA-VAEGAKAAGASRVIG-IDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Gag~vG~~-a~~la~~~g~~~vi~-v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
-+|.|+|.|.+|.. +..+.+.-+. ++.+ ++.+++ .+.+++++|....+ .++.+.+.......+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 46899999999987 4444443456 5554 444443 34667788864322 123333332111369999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++.......+..++.. |..+..-.
T Consensus 78 T~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 78 TSAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEECC
Confidence 9986555555555554 55554433
No 365
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.12 Score=47.36 Aligned_cols=80 Identities=26% Similarity=0.231 Sum_probs=49.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hHHH-HHH---hcCCceE---eCCCCCCchHHH
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFD-RAK---NFGVTEF---VNPKDHDKPIQQ 255 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~---------~~~~-~~~---~lg~~~v---~~~~~~~~~~~~ 255 (379)
..++++||+|+ +++|...++.+...|+ +|+.++++. ++.+ .+. +.+.... .|..+ ..+..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 35789999988 9999999998888999 788776543 3322 222 2343322 22222 123333
Q ss_pred HHHHhc--CCCccEEEEcCCC
Q 016978 256 VLVDLT--DGGVDYSFECIGN 274 (379)
Q Consensus 256 ~i~~~~--~~g~d~vid~~g~ 274 (379)
.+.+.. .+.+|++++++|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 333322 2479999998874
No 366
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.24 E-value=0.12 Score=45.82 Aligned_cols=79 Identities=23% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-Ee--CCCCCCchHHHHHHHhc--CCCcc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
++.++||+|+ |.+|..++..+...|+ .|+..+++.++.+.+ ..++... ++ |..+ ...+.+.+.+.. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999988 9999999998888998 788887776665543 3344322 22 2222 122222222221 13799
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
.+|.++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 367
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.22 E-value=0.12 Score=43.37 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=61.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC--ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
+|.|+|| |-+|...++=|..+|. .|+++.++++|....+..-+ ..+++.. ...+ .+ .|+|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~----~~a~---~l--~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT----SLAS---DL--AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh----hhHh---hh--cCCceEEEecc
Confidence 5788998 9999999999999999 89999999998755322111 0122211 1111 11 27999999877
Q ss_pred CH---------HHHHHHHHHhcc-CCceEEEEccCC
Q 016978 274 NV---------SVMRAALECCHK-GWGTSVIVGVAA 299 (379)
Q Consensus 274 ~~---------~~~~~~~~~l~~-~~G~iv~~g~~~ 299 (379)
.. ...+.++..++. +--++..+|...
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 63 224456666666 224777787653
No 368
>PRK07574 formate dehydrogenase; Provisional
Probab=95.21 E-value=0.17 Score=48.23 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=36.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg 239 (379)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+..+.+|
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 57899999999999999999999999 9999988764334334444
No 369
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.19 E-value=0.11 Score=45.82 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-EeCCCCC-CchHHHHHHHhc--CCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKDH-DKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~-~~~~~~~i~~~~--~~g 264 (379)
.+.++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... ++..+-. ...+.+.++... .++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999988 9999999988888999 899998887654432 2233222 2222111 123333333322 237
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998764
No 370
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.18 E-value=0.28 Score=44.71 Aligned_cols=61 Identities=20% Similarity=0.310 Sum_probs=45.4
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHhcCCceEeCCC
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~ 247 (379)
...+.++||++|+=--+|..|.+++.+|+.+|++-+++.. -+.+|+++++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4556699999554434499999999999999994444443 367899999999997665443
No 371
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.18 E-value=0.12 Score=46.66 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=48.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+.++..+.++ +.+....+ |..+ ..+....+.+.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5789999984 5899999998889999 8887765543333332 23432222 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999998764
No 372
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.12 Score=47.81 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=30.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4789999988 9999999999999999 88888776
No 373
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.12 E-value=0.12 Score=42.40 Aligned_cols=74 Identities=19% Similarity=0.212 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCCce-EeCCCCCCchHHHHHHHhcCCCccEEEE
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~g~d~vid 270 (379)
..+.+|+|+|+|.+|...++.+...|..+|++++++.++.+. +++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 457899999999999999998888874489999888876554 44555421 01111 11111 136999999
Q ss_pred cCCCH
Q 016978 271 CIGNV 275 (379)
Q Consensus 271 ~~g~~ 275 (379)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98773
No 374
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.09 Score=47.17 Aligned_cols=75 Identities=24% Similarity=0.202 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~g~d~vi 269 (379)
+|++|||+|+ |++|...++.+...|+ +|+++++++++. . .-.... ..|..+ .....+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999988 9999999999888999 899998875531 1 111111 123222 122222222221 23799999
Q ss_pred EcCC
Q 016978 270 ECIG 273 (379)
Q Consensus 270 d~~g 273 (379)
+++|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 375
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.10 E-value=0.17 Score=44.54 Aligned_cols=84 Identities=21% Similarity=0.264 Sum_probs=58.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh--cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN--FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~--lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
+++|.|+|.+|...++.+...|. .|++++.++++.+...+ ++. +++.-+. .-.+.+++.--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 67899999999999999999999 89999999998776333 554 3443332 12334555533489999998888
Q ss_pred HHHHHHHHHHhc
Q 016978 275 VSVMRAALECCH 286 (379)
Q Consensus 275 ~~~~~~~~~~l~ 286 (379)
.. .+..+..+.
T Consensus 77 d~-~N~i~~~la 87 (225)
T COG0569 77 DE-VNSVLALLA 87 (225)
T ss_pred CH-HHHHHHHHH
Confidence 33 444444333
No 376
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.07 E-value=0.17 Score=45.98 Aligned_cols=95 Identities=19% Similarity=0.192 Sum_probs=65.1
Q ss_pred ccccccchhhhhhhhhccCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 016978 173 CLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 173 a~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
..+||+....+. +++..++ -.|++|+|+|.| .+|.-+++++...|+ +|+.+....
T Consensus 135 ~~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t--------------------- 191 (285)
T PRK14191 135 GFVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT--------------------- 191 (285)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc---------------------
Confidence 345655554444 4455454 369999999985 999999999999999 777762211
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.++.+.++ .+|+|+-++|.+.++. -..++++ ..++.+|..
T Consensus 192 ~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 12222222 3899999999977654 3457886 889999864
No 377
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.07 E-value=0.1 Score=47.13 Aligned_cols=106 Identities=16% Similarity=0.299 Sum_probs=73.6
Q ss_pred hhhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce---EeCCCCCCchHH
Q 016978 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQ 254 (379)
Q Consensus 182 a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~ 254 (379)
++..+.++.+++||++||=+|+| =|-+++.+|+..|+ +|++++-|++..+.+++ .|... +...+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d------- 130 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD------- 130 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------
Confidence 34456788999999999999985 36667778888899 99999999998776654 55541 11111
Q ss_pred HHHHHhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEccCCC
Q 016978 255 QVLVDLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 255 ~~i~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
.+.+ .+.||-|+. -.|. ++.+..+.+.|+++ |++.+......
T Consensus 131 --~rd~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 131 --YRDF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred --cccc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 1111 124776653 2333 57789999999997 99988766543
No 378
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.47 Score=42.25 Aligned_cols=104 Identities=19% Similarity=0.183 Sum_probs=60.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHH-HH---HhcCCceE---eCCCCC--CchHHHHHHHh--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD-RA---KNFGVTEF---VNPKDH--DKPIQQVLVDL-- 260 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~-~~---~~lg~~~v---~~~~~~--~~~~~~~i~~~-- 260 (379)
.++++||+|+ |++|.++++.+...|+ +|+.+. +.+++.+ .. ++.+.... .|..+. ...+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4789999988 9999999999999999 777653 4444332 22 22232211 122220 01122222221
Q ss_pred --cC-CCccEEEEcCCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 016978 261 --TD-GGVDYSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 261 --~~-~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.. +++|++++++|.. + +++.++..+++. |+++.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 11 2699999988731 0 133455666775 8999887653
No 379
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.07 E-value=0.31 Score=43.76 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=67.9
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhc-CC
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DG 263 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~-~~ 263 (379)
++......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+.+.+. . +.. +.. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~~----~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DVR----DWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Chh----hCCCCC
Confidence 44556677889999998864 67777888775 55 899999999988888876654322 1 111 111 23
Q ss_pred CccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEE
Q 016978 264 GVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 264 g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.||+|+-... . ...+..+.+.|+++ |+++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 7999986432 1 45678889999997 998865
No 380
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.05 E-value=0.095 Score=45.28 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999889999877
No 381
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.04 E-value=0.12 Score=46.63 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEe--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|+ + ++|.++++.+...|+ +|+.++++++..+.+++ .+....+ |..+ ..+....+.+.. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 5789999988 3 799998888888999 78887776321222222 2222222 3222 233333333332 2
Q ss_pred CCccEEEEcCC
Q 016978 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~g~d~vid~~g 273 (379)
+.+|++++++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 47999999987
No 382
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.02 E-value=0.21 Score=44.15 Aligned_cols=34 Identities=35% Similarity=0.384 Sum_probs=30.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
..+|+|+|+|++|..++..+..+|..+++.+|..
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5899999999999999999999999888888643
No 383
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.00 E-value=0.17 Score=46.03 Aligned_cols=80 Identities=23% Similarity=0.351 Sum_probs=49.5
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHH-HHhcCCceEe--CCCCCCchHHHHHHHhc-
Q 016978 192 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDR-AKNFGVTEFV--NPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 192 ~~~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~---~~~~~-~~~lg~~~v~--~~~~~~~~~~~~i~~~~- 261 (379)
.-.++++||+|+ +++|.+.+..+...|+ +|+.+.+++ ++.+. .++++....+ |..+ ..+..+.+.+..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHH
Confidence 345789999987 5899999999989999 888876653 23322 2344532222 2222 123333333322
Q ss_pred -CCCccEEEEcCC
Q 016978 262 -DGGVDYSFECIG 273 (379)
Q Consensus 262 -~~g~d~vid~~g 273 (379)
.+.+|++++++|
T Consensus 85 ~~g~iD~lv~nAG 97 (272)
T PRK08159 85 KWGKLDFVVHAIG 97 (272)
T ss_pred hcCCCcEEEECCc
Confidence 247999999876
No 384
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.12 Score=47.01 Aligned_cols=79 Identities=18% Similarity=0.276 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------H----HHHHhcCCce-E--eCCCCCCchHHHHHH
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------F----DRAKNFGVTE-F--VNPKDHDKPIQQVLV 258 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~-------~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~ 258 (379)
.++++||+|+ |.+|..++..+...|+ +|++++++.++ + +.+++.+... + .|..+ .....+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4689999988 9999999998888999 88888876432 1 1122334332 1 23322 122333333
Q ss_pred Hhc--CCCccEEEEcCCC
Q 016978 259 DLT--DGGVDYSFECIGN 274 (379)
Q Consensus 259 ~~~--~~g~d~vid~~g~ 274 (379)
+.. .+.+|++|+++|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 221 1379999998874
No 385
>PLN03139 formate dehydrogenase; Provisional
Probab=94.97 E-value=0.21 Score=47.67 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=37.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 58899999999999999999999999 89999877544444444443
No 386
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.92 E-value=0.12 Score=44.53 Aligned_cols=99 Identities=17% Similarity=0.186 Sum_probs=59.2
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhcC
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~ 262 (379)
.+.....++.+||-+|+| .|..+..+++ .|. +|++++.+++-.+.+++ .+....... .+... ... .
T Consensus 23 ~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~----~d~~~--~~~-~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDA----YDINA--AAL-N 92 (195)
T ss_pred HHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe----ccchh--ccc-c
Confidence 334444556789999885 4666666665 477 89999999887766543 232211100 11100 011 2
Q ss_pred CCccEEEEcCC-----C---HHHHHHHHHHhccCCceEEEEc
Q 016978 263 GGVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 263 ~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+.+|+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 36999875421 1 35678888899997 9965553
No 387
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.91 E-value=0.13 Score=45.82 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce--E--eCCCC-CCchHHHHHHHhc
Q 016978 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE--F--VNPKD-HDKPIQQVLVDLT 261 (379)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~--v--~~~~~-~~~~~~~~i~~~~ 261 (379)
..++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+... + .+.+. ...++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457899999988 9999998888888899 899998887654332 2333221 2 22221 1123333333222
Q ss_pred C--CCccEEEEcCCC
Q 016978 262 D--GGVDYSFECIGN 274 (379)
Q Consensus 262 ~--~g~d~vid~~g~ 274 (379)
. +.+|.+|.+++.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 368999988764
No 388
>PRK00536 speE spermidine synthase; Provisional
Probab=94.91 E-value=0.089 Score=47.28 Aligned_cols=97 Identities=15% Similarity=-0.024 Sum_probs=64.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCCCchHHHHHHHhcCCCccEEE-Ec
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSF-EC 271 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~i~~~~~~g~d~vi-d~ 271 (379)
-++|||+|+|- |.++-.++|+- .+|+.++.+++-.++++++-... .++... ..+...+.+...+.+|+|| |+
T Consensus 73 pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR--v~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 73 LKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKN--FTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCC--EEEeehhhhccCCcCCEEEEcC
Confidence 49999997643 44455777775 38999999999888888733211 111111 1222233343334799866 76
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.-+++..+.+.++|+++ |.++.-+.
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 77778889999999997 99987643
No 389
>PRK08328 hypothetical protein; Provisional
Probab=94.90 E-value=0.13 Score=45.49 Aligned_cols=35 Identities=40% Similarity=0.473 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..++..+...|..+++.+|..
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999899998743
No 390
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.90 E-value=0.091 Score=45.82 Aligned_cols=97 Identities=22% Similarity=0.210 Sum_probs=62.3
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCchHHHHHHHh
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~ 260 (379)
....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+... ++..+. .+ ..
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~-----~~---~~ 139 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG-----WK---GW 139 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc-----cc---CC
Confidence 4566788999999998852 55555666653 3 89999999887665553 34432 121111 00 11
Q ss_pred c-CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 016978 261 T-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 261 ~-~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
. .+.||.|+-..........+...|+++ |+++..
T Consensus 140 ~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 140 PAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred CcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 1 137998886555556667788999997 998754
No 391
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.14 Score=46.31 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=48.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE-e--CCCCCCchHHHHHHHhc--CCCcc
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~g~d 266 (379)
+|||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++.+.+.. + |..+ ..++.+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899988 9999999988888899 888888887765432 22333322 1 2222 122333333222 23799
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 392
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.17 Score=46.04 Aligned_cols=99 Identities=21% Similarity=0.325 Sum_probs=59.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc-CCCcc
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT-DGGVD 266 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~-~~g~d 266 (379)
++++||+|+|++|..++..+. .|+ +|+.+++++++.+.+ ++.|... + .|..+ ...+...+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 467889999999999888875 788 899998887665432 2234322 2 23332 123333333321 24799
Q ss_pred EEEEcCCCH------------------HHHHHHHHHhccCCceEEEEcc
Q 016978 267 YSFECIGNV------------------SVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 267 ~vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++++++|.. .+++.+...+.++ |+++.++.
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS 126 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS 126 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence 999998741 1134444555665 77776654
No 393
>PRK12743 oxidoreductase; Provisional
Probab=94.88 E-value=0.15 Score=45.63 Aligned_cols=78 Identities=19% Similarity=0.124 Sum_probs=47.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHH----HHhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~----~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++|||+|+ |.+|..+++.+...|+ +|+.+. ++.++.+. ++..+... . .|..+ .......+.+.. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 578999988 9999999999999999 777664 34443322 23345332 2 23322 122222222221 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 394
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.87 E-value=0.17 Score=45.53 Aligned_cols=79 Identities=23% Similarity=0.388 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ +.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .......+.+.. .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5689999988 9999998888888899 788888887665433 2334332 1 22222 122222232221 13
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 395
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.85 E-value=0.16 Score=45.40 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |.+|...+..+...|+ +++.+++++++.+.+ ++.+.+. + .|..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4799999988 9999999998888999 788887777655433 2233322 2 23322 122333333321 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 396
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.84 E-value=0.12 Score=49.02 Aligned_cols=37 Identities=35% Similarity=0.461 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~ 230 (379)
-.|.+|.|.|.|.+|..+++.+..+|+ +|++++.+..
T Consensus 205 l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 205 LEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred cCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 489999999999999999999999999 8888877665
No 397
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.82 E-value=0.14 Score=48.91 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999876
No 398
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.81 E-value=0.23 Score=46.61 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=33.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 58999999999999999999999999 89999876543
No 399
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.79 E-value=0.28 Score=43.76 Aligned_cols=100 Identities=17% Similarity=0.298 Sum_probs=65.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCchHHHHHHHhc----
Q 016978 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---- 261 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~---- 261 (379)
+...-++||-+|.+ +|+.++.+|+.++- .+++.++.++++.+.+++ .|...-+.... .+..+.+.++.
T Consensus 76 ~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~~~ 152 (247)
T PLN02589 76 KLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIEDGK 152 (247)
T ss_pred HHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhccc
Confidence 44556789999873 68888899988742 389999999988777654 45433222221 33444555542
Q ss_pred -CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEE
Q 016978 262 -DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 262 -~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~ 294 (379)
.+.||.||--+-. ...+..++.+++++ |.++.
T Consensus 153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred cCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 2479998843222 35578889999996 77663
No 400
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.78 E-value=0.29 Score=47.03 Aligned_cols=82 Identities=21% Similarity=0.319 Sum_probs=51.5
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-------HHHhc-CCceE-eCCCCCCchHHHHHHH
Q 016978 190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVD 259 (379)
Q Consensus 190 ~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~-------~~~~l-g~~~v-~~~~~~~~~~~~~i~~ 259 (379)
.+-..+.+|||+|+ |.+|..++..+...|+ +|+++.++..+.+ ..... ++..+ .|..+ ...+...++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence 34556789999988 9999999999888999 8999888765321 11112 22222 23332 1233333333
Q ss_pred hcCCCccEEEEcCCC
Q 016978 260 LTDGGVDYSFECIGN 274 (379)
Q Consensus 260 ~~~~g~d~vid~~g~ 274 (379)
. ..++|+||+|++.
T Consensus 133 ~-~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E-GDPVDVVVSCLAS 146 (390)
T ss_pred h-CCCCcEEEECCcc
Confidence 2 1169999998764
No 401
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.78 E-value=0.28 Score=44.82 Aligned_cols=87 Identities=16% Similarity=0.239 Sum_probs=56.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 276 (379)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|..... . .+. +.+ ..+|+||.|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~--~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S--TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c--CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999988888888898 899999999988888877752111 0 111 111 25788888877633
Q ss_pred H---HHHHHHHhccCCceEEEEc
Q 016978 277 V---MRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 277 ~---~~~~~~~l~~~~G~iv~~g 296 (379)
. +..+...++++ -.++.++
T Consensus 70 ~~~~~~~l~~~l~~~-~ii~d~~ 91 (279)
T PRK07417 70 LLPPSEQLIPALPPE-AIVTDVG 91 (279)
T ss_pred HHHHHHHHHHhCCCC-cEEEeCc
Confidence 2 23333334443 4444444
No 402
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.77 E-value=0.12 Score=42.81 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=39.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
.|..||++|+ -++|...++-+...|+ +||++.+.++.+..+.+.-.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC
Confidence 5789999998 7899999999999999 99999999998877665433
No 403
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.76 E-value=0.11 Score=47.28 Aligned_cols=70 Identities=21% Similarity=0.173 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEE
Q 016978 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vi 269 (379)
+...+++|+|+|+|+.+.+++.-+..+|+.+|+++.++.+|.+.+.+ ++.. . ...+ ....+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc---ccccCCEEE
Confidence 34456799999999999999999999999889999999887765543 3311 1 0011 112589999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+|+.-
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 98753
No 404
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.26 Score=43.66 Aligned_cols=76 Identities=22% Similarity=0.253 Sum_probs=48.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h---cC-Cc-eEe--CCCCCCchHHHHHHHhcCCCcc
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FG-VT-EFV--NPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~---lg-~~-~v~--~~~~~~~~~~~~i~~~~~~g~d 266 (379)
++|+|+|+ |.+|...+..+...|+ +|+++++++++.+.+. + .+ .. +++ |..+ ..+....+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHHh-hcCC
Confidence 57999988 9999999999888999 8999988887654322 1 11 11 122 2222 123333333322 2579
Q ss_pred EEEEcCCC
Q 016978 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
+++.++|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987764
No 405
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.76 E-value=0.18 Score=42.54 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
+|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999998899998899998764
No 406
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.75 E-value=0.24 Score=42.70 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=57.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHhcCCceEeCCCCCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-------------------~----~~~~~~lg~~~v~~~~~~~ 250 (379)
...+|+|+|+|++|.-.+..+-..|.+++..+|...- | .+.++++..+..+....
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4688999999999999999999999988988875421 1 12234455443332211
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCce
Q 016978 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 291 (379)
Q Consensus 251 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~ 291 (379)
..+.+...+.. .++|+|++|..+.+.....-+.++.. +.
T Consensus 98 ~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~i 136 (197)
T cd01492 98 DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GV 136 (197)
T ss_pred cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CC
Confidence 11111111211 26899999988766555555555553 44
No 407
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.74 E-value=0.28 Score=44.56 Aligned_cols=100 Identities=18% Similarity=0.107 Sum_probs=61.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCCC---CchHHHHHHHhcCCCccEE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~---~~~~~~~i~~~~~~g~d~v 268 (379)
..++||++|+|. |..+..+++.....++++++.+++-.+.+++.-.. ..++.... ..+..+.+++. .+.+|+|
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDvI 149 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDVI 149 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccEE
Confidence 346999998864 44556666666566899999998877777663210 00100000 02333334332 3489998
Q ss_pred EEcCC----------CHHHHHHHHHHhccCCceEEEEc
Q 016978 269 FECIG----------NVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 269 id~~g----------~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+--.. ..++++.+.+.|+++ |.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 74222 235578889999997 9998763
No 408
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.71 E-value=0.18 Score=44.90 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHH----HHhcCCceE---eCCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~-v~~~~~~~~~----~~~lg~~~v---~~~~~~~~~~~~~i~~~~--~ 262 (379)
++.++||+|+ |.+|..++..+...|+ +|+. ..++.++.+. +++.+.... .|..+ ..+....+.+.. .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4679999988 9999999999999999 6655 4566554332 233443322 22222 123333333322 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++|+++|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 409
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.69 E-value=0.32 Score=45.44 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEcCChhHHHHHH-h----cCCceEeCCCCCCchHHHHHHHhcCCCcc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDRAK-N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~l-a~~~g~~~vi~v~~~~~~~~~~~-~----lg~~~v~~~~~~~~~~~~~i~~~~~~g~d 266 (379)
...++++|+|+|..|...+.. +...++++|.++++++++.+.+. + ++.. +.... +..+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 346789999999999876654 45678889999999988765443 2 3432 22222 232233 2589
Q ss_pred EEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 016978 267 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 267 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+|+.|+++.+.+- . ..++++ -.+..+|...
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 9999988865333 3 788885 7888888753
No 410
>PLN02244 tocopherol O-methyltransferase
Probab=94.69 E-value=0.096 Score=49.32 Aligned_cols=95 Identities=22% Similarity=0.307 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce---EeCCCCCCchHHHHHHHhcCCCc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~i~~~~~~g~ 265 (379)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .|... ++..+. .++ .+..+.|
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~--~~~-----~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA--LNQ-----PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc--ccC-----CCCCCCc
Confidence 688999999885 45667788887788 99999999887666554 23211 111111 000 1223479
Q ss_pred cEEEEcCCC------HHHHHHHHHHhccCCceEEEEcc
Q 016978 266 DYSFECIGN------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 266 d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
|+|+-.... ...+.++.+.|+++ |+++....
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 999864322 34678899999997 99987654
No 411
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.68 E-value=0.11 Score=46.93 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~g~d~vi 269 (379)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+. ..... ..|..+ ..++.+.+.+.. .+.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 9999999999999999 88888777654321 11111 123322 123333333322 23789999
Q ss_pred EcCCC
Q 016978 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 412
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.67 E-value=0.22 Score=50.36 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=57.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCH
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 275 (379)
++|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...++-... -.+.+++..-..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 788999999999999999999998 8999999999999999988765543222 12233333223788888776664
Q ss_pred H
Q 016978 276 S 276 (379)
Q Consensus 276 ~ 276 (379)
+
T Consensus 493 ~ 493 (558)
T PRK10669 493 Y 493 (558)
T ss_pred H
Confidence 3
No 413
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.66 E-value=0.12 Score=45.77 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChh-HHHHH---HhcCCceE---eCCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPK-KFDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v-~~~~~-~~~~~---~~lg~~~v---~~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ |.+|..+++.+...|+ +|++. .+.+. +.+.+ ++.+.... .|..+ ..+..+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3678999988 9999999999999999 66664 33332 22222 33454332 23222 122333333322 1
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 414
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.65 E-value=0.15 Score=45.83 Aligned_cols=102 Identities=22% Similarity=0.281 Sum_probs=60.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHHHhcCCc-eE--eCCCCCCchHHHHHHHhc
Q 016978 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~------~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~ 261 (379)
.|+++||+|+ +++|.+++..+...|+ +|+.+.++. +..+.+++.+.. .. .|..+ .....+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4789999986 4899999988888999 777764332 222223222221 12 23222 123333333322
Q ss_pred --CCCccEEEEcCCCH-------H----------------------HHHHHHHHhccCCceEEEEccC
Q 016978 262 --DGGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 --~~g~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+.+|++++++|.. . ..+.++..++++ |+++.++..
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 24799999988731 0 134556667775 999888654
No 415
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.61 E-value=0.23 Score=45.57 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=47.4
Q ss_pred hhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHhcCCceEe
Q 016978 187 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~---~~~~~~~~~~lg~~~v~ 244 (379)
...+.+.||.++||=.. |..|...+.++...|+ ++|++-. +.||+..++++|+..+.
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 35567999999999877 9999999999999999 7777644 56899999999996553
No 416
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.61 E-value=0.21 Score=44.15 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHhcCCce-Ee--CCCCCCchHHHHHHHhcC--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~~~----~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~-- 262 (379)
.+.+|||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ .++..+... ++ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3578999988 9999999999999999 6766655443 222 122233322 22 3222 1233333333322
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|.++.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 417
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.59 E-value=0.2 Score=44.76 Aligned_cols=100 Identities=19% Similarity=0.132 Sum_probs=59.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc--CCceE-eCCCCCCchHHHHHHHhcCCCccEEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l--g~~~v-~~~~~~~~~~~~~i~~~~~~g~d~vi 269 (379)
.+.+|||+|+ |.+|..++..+...|+ +|+++.++.++....... ++..+ .|..+ . . +.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~-~-~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G-S-DKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C-H-HHHHHHhhcCCCEEE
Confidence 4689999998 9999999988888898 898888887765433221 22211 23222 1 1 122222212689999
Q ss_pred EcCCCHH-------------HHHHHHHHhccC-CceEEEEccC
Q 016978 270 ECIGNVS-------------VMRAALECCHKG-WGTSVIVGVA 298 (379)
Q Consensus 270 d~~g~~~-------------~~~~~~~~l~~~-~G~iv~~g~~ 298 (379)
.+.|... ....+++.+... .++++.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 123344444432 2578887654
No 418
>PLN00203 glutamyl-tRNA reductase
Probab=94.57 E-value=0.14 Score=50.75 Aligned_cols=72 Identities=14% Similarity=0.266 Sum_probs=51.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcC-Cce-EeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++ ... +...+ +..+.+ ..+|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~----dl~~al-----~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD----EMLACA-----AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh----hHHHHH-----hcCCEEEEc
Confidence 689999999999999999999999878999999988866554 453 221 11111 121111 258999999
Q ss_pred CCCH
Q 016978 272 IGNV 275 (379)
Q Consensus 272 ~g~~ 275 (379)
++.+
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 8764
No 419
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.56 E-value=0.28 Score=45.51 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~ 230 (379)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 8999877554
No 420
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.53 E-value=0.22 Score=47.99 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCc-eE--eCCCCCCchHHHHHHHhcCCCccEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v--~~~~~~~~~~~~~i~~~~~~g~d~v 268 (379)
.|++|||+|+ |++|.+.+..+...|+ +|+++++++++.+... +.+.. .. .|..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4789999988 9999999998888999 8998888776553321 11111 12 22222 1 1222222 369999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|+++|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988764
No 421
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.51 E-value=0.26 Score=45.11 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=65.4
Q ss_pred ccccccchhhhhhhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHhcCCceEeCCCCC
Q 016978 173 CLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 173 a~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
..+||+....+. +++..++ -.|++|+|+|- +.+|.-.+.++...|+ .|++.. ++..
T Consensus 136 ~~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD------------------- 194 (296)
T ss_pred CCcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC-------------------
Confidence 345665444444 3444443 47999999995 9999999999999999 888873 3321
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 250 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+.+.+ ...|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 ---l~e~~-----~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 195 ---LPAVC-----RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred ---HHHHH-----hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 11111 14799999999988776654 8886 888888864
No 422
>PRK09135 pteridine reductase; Provisional
Probab=94.51 E-value=0.24 Score=43.85 Aligned_cols=78 Identities=17% Similarity=0.148 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHH----hcCC--ceE--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK----NFGV--TEF--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~----~lg~--~~v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.+++|||+|+ |.+|..++..+...|+ +|++++++. ++.+.+. +... .++ .|..+ ...+...+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999988 9999998888888899 888887753 3332221 2211 112 23322 122333333221
Q ss_pred CCCccEEEEcCC
Q 016978 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~g~d~vid~~g 273 (379)
.+++|+||.++|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 236899999987
No 423
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.50 E-value=0.092 Score=49.56 Aligned_cols=75 Identities=20% Similarity=0.146 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcC--Cce-Ee--CCCCCCchHHHHHHHhcCC-Cc
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFG--VTE-FV--NPKDHDKPIQQVLVDLTDG-GV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~-~~~~lg--~~~-v~--~~~~~~~~~~~~i~~~~~~-g~ 265 (379)
+|.+|||+|+ |.+|..++..+...|+ +|+++++++.... ..+.++ ... .+ |..+ ..+ +.+.... ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~----~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAK----LRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHH----HHHHHhhcCC
Confidence 4789999987 9999999999999999 8988877655322 212221 111 11 2222 122 2333223 68
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|+||++++.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
No 424
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.49 E-value=0.24 Score=46.93 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
.+.+|||+|+|++|..+++.+...|..+++.++...
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 458999999999999999999999999999997653
No 425
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.49 E-value=0.29 Score=45.29 Aligned_cols=79 Identities=22% Similarity=0.301 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHH----HHHHhcCCceEe---CCCCCCchHHHHHHHhc-CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTEFV---NPKDHDKPIQQVLVDLT-DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~----~~~~~lg~~~v~---~~~~~~~~~~~~i~~~~-~~ 263 (379)
.|+++||+|+ +++|...++.+...|+ +|+.+++.. ++. +.+++.|....+ |..+ .....+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 5789999988 9999999988888999 788876542 222 222334433222 2222 122222222211 25
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 426
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.47 E-value=0.2 Score=44.59 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CCCc
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g~ 265 (379)
+++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... . .|..+ .....+.+.+.. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 46899988 9999999999889999 898888876654322 2334322 1 12222 123333333322 2368
Q ss_pred cEEEEcCCC
Q 016978 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++|+++|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 427
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.46 E-value=0.56 Score=41.76 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHH-Hh---cCCce-Ee--CCCCCCchHHHHHHHhc---
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~-v~~~~~~~~~~-~~---lg~~~-v~--~~~~~~~~~~~~i~~~~--- 261 (379)
.+.+++|+|+ |.+|..+++.+...|+ +|++ ..++.++.+.+ .+ .+... ++ |..+ ..++...+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 3679999988 9999999998888899 6655 45666544322 22 23222 22 3322 133333333321
Q ss_pred ----C-CCccEEEEcCCC
Q 016978 262 ----D-GGVDYSFECIGN 274 (379)
Q Consensus 262 ----~-~g~d~vid~~g~ 274 (379)
. +++|++|.++|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999998875
No 428
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.46 E-value=0.19 Score=45.21 Aligned_cols=78 Identities=18% Similarity=0.328 Sum_probs=47.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHH-Hhc-CCce-E--eCCCCCCchHHHHHHHhc-
Q 016978 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVTE-F--VNPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~---~~~~~~-~~l-g~~~-v--~~~~~~~~~~~~~i~~~~- 261 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ .++ +... . .|..+ ..+....+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4789999987 4999999998888999 788876543 333323 333 2211 1 23332 233333333332
Q ss_pred -CCCccEEEEcCC
Q 016978 262 -DGGVDYSFECIG 273 (379)
Q Consensus 262 -~~g~d~vid~~g 273 (379)
.+.+|++++++|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 247999998876
No 429
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.44 E-value=1.4 Score=32.71 Aligned_cols=85 Identities=22% Similarity=0.328 Sum_probs=53.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEEEE-cCChhHHHHH-HhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAG---ASRVIGI-DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g---~~~vi~v-~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
+|.|+|+|.+|.+.+.-....| . +|+.+ ++++++.+.+ ++++..... .+..+.++ ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 5778899999999999988888 6 77744 8999887666 456643221 12333333 37999999
Q ss_pred CCCHHHHHHHHHH---hccCCceEEEE
Q 016978 272 IGNVSVMRAALEC---CHKGWGTSVIV 295 (379)
Q Consensus 272 ~g~~~~~~~~~~~---l~~~~G~iv~~ 295 (379)
+.... +...+.. ..++ ..++.+
T Consensus 69 v~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred ECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 88744 4334433 3443 444443
No 430
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.43 E-value=0.5 Score=38.71 Aligned_cols=97 Identities=23% Similarity=0.297 Sum_probs=63.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CchHHHHHHHhcCC-CccEE
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDYS 268 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~----~~~~~~~i~~~~~~-g~d~v 268 (379)
..+|+|.|. |++|-+-++..++.++ -|..++-++.. +..+..+++-++. .....+.+.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe-----~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENE-----QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccc-----cccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 358999988 9999999999999999 88888776542 2223344544331 12233344444456 99999
Q ss_pred EEcCCCH--------H------------------HHHHHHHHhccCCceEEEEccC
Q 016978 269 FECIGNV--------S------------------VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 269 id~~g~~--------~------------------~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
|..+|+. + ....+...|+++ |-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence 9877751 0 123445668896 888777643
No 431
>PRK01581 speE spermidine synthase; Validated
Probab=94.42 E-value=0.74 Score=43.34 Aligned_cols=102 Identities=17% Similarity=0.068 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC-c----eEeCCCCC---CchHHHHHHHhcCCC
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-T----EFVNPKDH---DKPIQQVLVDLTDGG 264 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~-~----~v~~~~~~---~~~~~~~i~~~~~~g 264 (379)
...++|||+|+| .|.++..+++.-+..+|++++.+++-.+.++++.. . ..++.... -.+..+.+.+ ..+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 334799999875 56677777777666699999999999999986310 0 00000000 1233444443 3347
Q ss_pred ccEEEEcCCC-----------HHHHHHHHHHhccCCceEEEEcc
Q 016978 265 VDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 265 ~d~vid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+|+||--... .+++..+.+.|+++ |.++....
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 9997743221 34688899999997 99887643
No 432
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.39 E-value=0.24 Score=43.83 Aligned_cols=78 Identities=23% Similarity=0.367 Sum_probs=48.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhcC--C
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v-~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~ 263 (379)
++++||+|+ |.+|..++..+...|+ +++.+ ++++++.+.+. ..+... ++ |..+ ...+.+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 578999988 9999998888888899 77777 78776554332 222222 22 2222 1223232322211 3
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998774
No 433
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.37 E-value=0.55 Score=39.94 Aligned_cols=98 Identities=20% Similarity=0.259 Sum_probs=62.9
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCchHHHHHHHh
Q 016978 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~ 260 (379)
+....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. + ... .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-d----~~~----~ 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-E----API----E 93 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-C----chh----h
Confidence 4455677899999888853 6666677776543489999999987776653 33322 2221 1 111 1
Q ss_pred cCCCccEEEEcCC---CHHHHHHHHHHhccCCceEEEE
Q 016978 261 TDGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 261 ~~~g~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
..+.+|+|+.... -...+..+.+.|+++ |+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 1236999986432 134678889999997 998764
No 434
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.36 E-value=0.05 Score=28.92 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=16.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC
Q 016978 10 CKAAVAWEPNKPLVIEDVQVAPP 32 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~ 32 (379)
|||+++.++++ +.++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999999 99999999875
No 435
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.35 E-value=0.45 Score=41.77 Aligned_cols=95 Identities=25% Similarity=0.291 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCCCchHHHHHHHhcCCCccEEEE
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~i~~~~~~g~d~vid 270 (379)
-+|.+||=+|+| .|+++..+| .+|+ +|+++|-+++-.+.++.-.... -++|.. ...+.+.... +.||+|+.
T Consensus 58 l~g~~vLDvGCG-gG~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCG-GGILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCC-ccHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhcC-CCccEEEE
Confidence 478999999984 245554444 4578 9999999999888887422211 134432 3333333321 48999985
Q ss_pred c-----CCC-HHHHHHHHHHhccCCceEEEE
Q 016978 271 C-----IGN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 271 ~-----~g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
. +.. ..++..+.++++|+ |.+..-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 3 222 35788899999996 887654
No 436
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.35 E-value=0.27 Score=50.27 Aligned_cols=77 Identities=18% Similarity=0.328 Sum_probs=58.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- +. .-.+.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Da---t~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DA---TRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eC---CCHHHHHhcCCCcCCEEEEEeCC
Confidence 3689999999999999999999999 8999999999999999988754432 21 11223433322378999988888
Q ss_pred HH
Q 016978 275 VS 276 (379)
Q Consensus 275 ~~ 276 (379)
++
T Consensus 475 ~~ 476 (621)
T PRK03562 475 PQ 476 (621)
T ss_pred HH
Confidence 54
No 437
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.32 E-value=0.37 Score=43.55 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=67.3
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eE-eCCCCCCchHHHHHHHhcC
Q 016978 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EF-VNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v-~~~~~~~~~~~~~i~~~~~ 262 (379)
+....++.++.+||=+|+| .|..+..+++..++ +|++++.+++-.+.+++.... .+ +... ++.+ .....
T Consensus 44 ~l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~----D~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN----DILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC----Cccc--CCCCC
Confidence 4566788999999999886 35556677777787 899999999888877764221 11 1111 1100 01122
Q ss_pred CCccEEEEc--C---C---CHHHHHHHHHHhccCCceEEEEcc
Q 016978 263 GGVDYSFEC--I---G---NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 263 ~g~d~vid~--~---g---~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.||+|+.. . + ...++..+.+.|+|+ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 379999852 1 1 134678888999997 99987654
No 438
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.29 E-value=0.32 Score=47.30 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=63.0
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCchHHHHHHHh
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~ 260 (379)
....+++|++||=+|+| .|..++++++.++..+|++++.++++++.++ .+|... + .+.+. ..... ..
T Consensus 232 ~~L~~~~g~~VLDlcag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~--~~~~~---~~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG--RGPSQ---WA 305 (426)
T ss_pred HHhCCCCCCeEEEeCCC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc--ccccc---cc
Confidence 44567899999988764 2444445555555338999999999877664 356542 2 22111 10000 00
Q ss_pred cCCCccEEE-E--cCCC-------------------------HHHHHHHHHHhccCCceEEEEcc
Q 016978 261 TDGGVDYSF-E--CIGN-------------------------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 261 ~~~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
..+.||.|| | |+|. ...+..+++.++++ |+++..-.
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 123699887 3 4543 24677889999997 99986643
No 439
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.28 E-value=0.17 Score=50.62 Aligned_cols=71 Identities=23% Similarity=0.247 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.+++|||+|+|++|.+++..+...|+ +|++++++.++.+.+. +++.. ++...+ + .+......|++++|+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~----~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD----L----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH----h----hhhccccCeEEEecc
Confidence 46789999999999999999999999 8999988877765544 44322 222111 1 111112578898876
Q ss_pred CC
Q 016978 273 GN 274 (379)
Q Consensus 273 g~ 274 (379)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 53
No 440
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.27 E-value=0.31 Score=44.65 Aligned_cols=95 Identities=18% Similarity=0.195 Sum_probs=66.6
Q ss_pred ccccccchhhhhhhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 016978 173 CLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 173 a~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
..+||+....+. +++..++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 137 ~~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------- 194 (301)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC--------------------
Confidence 355665444444 4454444 46999999999 5999999999999999 8888844322
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+..+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1111111 3799999999988776654 8886 888888854
No 441
>PLN02823 spermine synthase
Probab=94.27 E-value=0.44 Score=44.64 Aligned_cols=99 Identities=19% Similarity=0.141 Sum_probs=62.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCCC---CchHHHHHHHhcCCCccEE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~---~~~~~~~i~~~~~~g~d~v 268 (379)
..++|||+|.| -|..+.++++..+..+|++++.+++-.++++++... ..+..... ..|-...+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG-~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGG-EGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCC-chHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 34789999875 355566777777777999999999999999875321 01110000 1233344433 33489987
Q ss_pred E-EcCC-----------CHHHHH-HHHHHhccCCceEEEE
Q 016978 269 F-ECIG-----------NVSVMR-AALECCHKGWGTSVIV 295 (379)
Q Consensus 269 i-d~~g-----------~~~~~~-~~~~~l~~~~G~iv~~ 295 (379)
| |... +.+++. .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 7 4321 124566 788899997 998754
No 442
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.23 E-value=0.28 Score=44.09 Aligned_cols=78 Identities=12% Similarity=0.196 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH-Hh----cCCce-E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KN----FGVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~-~~----lg~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
+++++||+|+ +++|...+..+...|+ +|+.+.+ ++++.+.+ ++ .+... . .|..+ ..+....+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999999889999 7777643 44443322 11 23321 2 23332 123333333322
Q ss_pred CCCccEEEEcCC
Q 016978 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~g~d~vid~~g 273 (379)
.+.+|++++++|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247899999875
No 443
>PLN03075 nicotianamine synthase; Provisional
Probab=94.23 E-value=0.23 Score=45.39 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=65.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCC-----ceEeCCCCCCchHHHHHHHhcCCCccE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGV-----TEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~lg~-----~~v~~~~~~~~~~~~~i~~~~~~g~d~ 267 (379)
+.++|+-+|.|+.++.++.+++... ..++++++.+++..+.+++.-. ..-+.... .+..+... ..+.||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhhccc--ccCCcCE
Confidence 7799999999999998888887654 3389999999998888876431 11111111 12211110 1247999
Q ss_pred EEEcC-------CCHHHHHHHHHHhccCCceEEEE
Q 016978 268 SFECI-------GNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~-------g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
||-.+ .....+..+.+.|+++ |.++.=
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 98654 2245688999999996 887744
No 444
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.18 E-value=0.4 Score=42.92 Aligned_cols=99 Identities=14% Similarity=0.238 Sum_probs=63.9
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCchHHHHHHHhcCCCcc
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~g~d 266 (379)
+.....++++||-+|+|. |..+..+++ .|. ++++++.+++..+.+++.... .++..+- .++ ....+.||
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~--~~~-----~~~~~~fD 105 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI--ESL-----PLATATFD 105 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc--ccC-----cCCCCcEE
Confidence 333445678999999864 666555554 576 899999999998888875432 2222111 110 12223799
Q ss_pred EEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 016978 267 YSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 267 ~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+|+.... ....+..+.+.|+++ |.++....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 9986432 135688889999997 99886643
No 445
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.17 E-value=0.29 Score=45.53 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|++|||+|+ |.+|..++..+...|+ +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4789999988 9999999998888899 78877676554
No 446
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.16 E-value=1.9 Score=37.72 Aligned_cols=93 Identities=13% Similarity=0.084 Sum_probs=55.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.+.+|||+|+|.+|.-=+..+...|+ +|++++..- +.+..+.+.|.-..+ ..+.... . + .++++||-|+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~---d---l--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKE---F---I--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChH---H---h--CCCcEEEECC
Confidence 57899999999999988888888999 787774432 222222223322222 1111111 1 1 3789999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 016978 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.+. ++..+...++..+.++....
T Consensus 94 dD~~-vN~~I~~~a~~~~~lvn~vd 117 (223)
T PRK05562 94 DDEK-LNNKIRKHCDRLYKLYIDCS 117 (223)
T ss_pred CCHH-HHHHHHHHHHHcCCeEEEcC
Confidence 8866 55544444432377776644
No 447
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.13 E-value=0.23 Score=51.39 Aligned_cols=79 Identities=24% Similarity=0.394 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce--E--eCCCCCCchHHHHHHHhc--
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE--F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~----lg~~~--v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.+++|||+|+ |++|..+++.+...|+ +|++++++.++.+.+. + .+... . .|..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999998888999 8999988877654432 1 23211 1 22222 123333333322
Q ss_pred CCCccEEEEcCCC
Q 016978 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~g~d~vid~~g~ 274 (379)
.+++|++|+++|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
No 448
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.12 E-value=0.5 Score=42.81 Aligned_cols=79 Identities=18% Similarity=0.139 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+..++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +..+... ++ |..+ ...+.+.+.+.. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999988 9999999988888899 888887776654322 2234332 21 2222 123333333321 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998875
No 449
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.12 E-value=0.26 Score=43.94 Aligned_cols=77 Identities=22% Similarity=0.280 Sum_probs=47.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HH----HHHHhcCCce-E--eCCCCCCchHHHHHHHhcC--CC
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 264 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~g 264 (379)
+++||+|+ |.+|..++..+...|+ +|+.+++... +. +.++..+... + .|..+ ..++.+.+.+... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57899988 9999999998888999 8888876532 21 1222233322 2 23322 2333333333322 36
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 450
>PRK07411 hypothetical protein; Validated
Probab=94.10 E-value=0.3 Score=46.82 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|||+|+|++|..+++.+...|.++++.+|.+
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35799999999999999999999999999998754
No 451
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.09 E-value=0.23 Score=44.25 Aligned_cols=74 Identities=30% Similarity=0.302 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCCccE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~g~d~ 267 (379)
+++++||+|+ |.+|...+..+...|+ +|++++++. .+..+... . .|..+ ...+.+.+.+.. .+.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999988 9999999998888999 888887765 12222221 1 12222 123333333322 136899
Q ss_pred EEEcCCC
Q 016978 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998875
No 452
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.04 E-value=0.23 Score=39.42 Aligned_cols=79 Identities=22% Similarity=0.383 Sum_probs=48.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.-+|-|+|+|-+|..+...++..|. .|..+. ++.++.+.+.. ++...+.+..+ .. ..+|++|-++
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav 76 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV 76 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence 3578899999999999999999999 788874 45555565554 34333332221 11 2589999998
Q ss_pred CCHHHHHHHHHHhcc
Q 016978 273 GNVSVMRAALECCHK 287 (379)
Q Consensus 273 g~~~~~~~~~~~l~~ 287 (379)
.. +.+......|..
T Consensus 77 pD-daI~~va~~La~ 90 (127)
T PF10727_consen 77 PD-DAIAEVAEQLAQ 90 (127)
T ss_dssp -C-CHHHHHHHHHHC
T ss_pred ch-HHHHHHHHHHHH
Confidence 88 457777777765
No 453
>PRK08223 hypothetical protein; Validated
Probab=94.04 E-value=0.27 Score=44.71 Aligned_cols=35 Identities=31% Similarity=0.285 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|||+|+|++|..+++.+..+|..++..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46899999999999999999999999899988764
No 454
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.03 E-value=0.33 Score=43.59 Aligned_cols=79 Identities=16% Similarity=0.131 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHhcCCce-E--eCCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~~----~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ |.+|...++.+...|+ +++.+.++. +..+ .+++.+... + .|..+ .....+.+.+.. .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 677665533 3222 222334322 1 23332 122333333322 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 455
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.03 E-value=0.68 Score=40.64 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=30.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
+..+|+|+|.|+||-+++..+-..|..++..++-
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~ 62 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDM 62 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEec
Confidence 4588999999999999999999999988888864
No 456
>PRK04266 fibrillarin; Provisional
Probab=94.01 E-value=0.91 Score=40.02 Aligned_cols=102 Identities=13% Similarity=0.175 Sum_probs=60.7
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC----ceEeCCCCCCchHHHHHHHhcCC
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
+...+++|++||=.|+| .|..+..+++..+..+|++++.+++.++.+.+... -..+..+. .+. .....+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~--~~~-~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA--RKP-ERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC--CCc-chhhhc-cc
Confidence 44678999999988874 24455566776653489999999976664432211 11221111 110 000111 12
Q ss_pred CccEEEEcCCCHH----HHHHHHHHhccCCceEEEE
Q 016978 264 GVDYSFECIGNVS----VMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 264 g~d~vid~~g~~~----~~~~~~~~l~~~~G~iv~~ 295 (379)
.+|+|+.-...+. ++..+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999995444322 367888899997 998874
No 457
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.01 E-value=0.26 Score=44.26 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=48.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHH-HHHhcCCce-E--eCCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD-RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~--~~~~-~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.++++||+|+ +++|.+.++.+...|+ +|+.++++. +..+ ..++++... . .|..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4789999985 7999999988888999 888887653 3323 333343321 1 23322 122333333322 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998764
No 458
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.01 E-value=0.37 Score=45.82 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|||+|+|++|..+++.+...|..+++.++..
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999999899999865
No 459
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.99 E-value=0.34 Score=44.87 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=56.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCceEeCCCCCCchHHH-HHHHhcCCCccEEEEcCC
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQ-VLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~-~i~~~~~~g~d~vid~~g 273 (379)
-+|+|+|+|++|...+-.+...|. .|+.+.+.+++.+.+++- |.. +...... ..+.- .......+.+|+||-|+=
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~-~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQA-SLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcc-eeeccCCCCcccccccCEEEEECC
Confidence 369999999999887777777788 788898987777777643 432 2111110 00000 000001136899998866
Q ss_pred CHH---HHHHHHHHhccCCceEEEEc
Q 016978 274 NVS---VMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 274 ~~~---~~~~~~~~l~~~~G~iv~~g 296 (379)
+.+ .+..+...+.++ ..++.+-
T Consensus 80 ~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred HHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 633 334444445664 6666553
No 460
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.99 E-value=0.3 Score=41.37 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=43.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hHHHHHHhcCCceEe---CCCCCCchHHHHHHHhcC--C
Q 016978 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-------~~~~~~~~lg~~~v~---~~~~~~~~~~~~i~~~~~--~ 263 (379)
++||+|+ |++|+..++.+...|..+++.+.++. +..+.+++.|....+ |..+ .+.+.+.+..... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTD-PEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTS-HHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccC-HHHHHHHHHHHHhccC
Confidence 6899976 99999999999999888999998882 223444556664322 1111 1333334444332 2
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.++.||.+.|.
T Consensus 81 ~i~gVih~ag~ 91 (181)
T PF08659_consen 81 PIDGVIHAAGV 91 (181)
T ss_dssp -EEEEEE----
T ss_pred Ccceeeeeeee
Confidence 56777777665
No 461
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.99 E-value=0.54 Score=43.15 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=37.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999988888888898 89999999999888887775
No 462
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.98 E-value=0.36 Score=49.23 Aligned_cols=93 Identities=10% Similarity=0.073 Sum_probs=65.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCH
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 275 (379)
+.|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++-. . .-.+.+++..-..+|.++-+.+++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GD-a---t~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGD-A---TQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEee-C---CCHHHHHhcCCccCCEEEEEeCCH
Confidence 679999999999999999999999 89999999999999999887554422 1 112234443223789999988885
Q ss_pred HHHHHH---HHHhccCCceEEE
Q 016978 276 SVMRAA---LECCHKGWGTSVI 294 (379)
Q Consensus 276 ~~~~~~---~~~l~~~~G~iv~ 294 (379)
+.-..+ .+...+. -+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 432233 3334453 45543
No 463
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.98 E-value=0.72 Score=42.44 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=55.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC--CchHHHHHHHhcCCCccEEEEcCCC
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~--~~~~~~~i~~~~~~g~d~vid~~g~ 274 (379)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|... ...+. ........... ..+|+||-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999998888888898 8999988788777777656421 00000 00000001111 368999998876
Q ss_pred HHHHHHHHHHh----ccCCceEEEE
Q 016978 275 VSVMRAALECC----HKGWGTSVIV 295 (379)
Q Consensus 275 ~~~~~~~~~~l----~~~~G~iv~~ 295 (379)
.+ +..++..+ .++ ..++.+
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEe
Confidence 33 34444433 342 455554
No 464
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.96 E-value=0.37 Score=43.82 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=65.0
Q ss_pred cccccchhhhhhhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCc
Q 016978 174 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 174 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 251 (379)
..||+....+. +++..++ -.|++|+|+|. ..+|.-++.++...|+ +|+.+.+.. .
T Consensus 137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~t---------------------~ 193 (285)
T PRK14189 137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSKT---------------------R 193 (285)
T ss_pred CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCCC---------------------C
Confidence 45655444443 3444443 36999999998 5569999999999999 788762211 2
Q ss_pred hHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 252 ~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.++ .+|+|+-++|.+.++.. ..++++ ..++.+|..
T Consensus 194 ~l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin 232 (285)
T PRK14189 194 DLAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN 232 (285)
T ss_pred CHHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence 2222222 38999999999876654 779996 889999864
No 465
>PRK05855 short chain dehydrogenase; Validated
Probab=93.95 E-value=0.25 Score=49.89 Aligned_cols=79 Identities=24% Similarity=0.314 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++.|... + .|..+ .....+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999988 9999999988889999 799998987765543 2334322 1 23332 123333333322 23
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999875
No 466
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.95 E-value=0.34 Score=42.79 Aligned_cols=78 Identities=22% Similarity=0.258 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+.++|||+|+ |.+|..++..+...|+ +|+++.+ ..+..+.+ ...+... ++ |..+ ...+.+.+.+.. .
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3579999988 9999999999999999 6655434 44333222 2233221 22 2222 123333333321 1
Q ss_pred CCccEEEEcCC
Q 016978 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~g~d~vid~~g 273 (379)
+++|+||.++|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37999999887
No 467
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=93.94 E-value=0.54 Score=43.82 Aligned_cols=101 Identities=19% Similarity=0.278 Sum_probs=61.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcC----CCeEEEEcC--ChhHHHHHHhcCCce--------------EeCCCCCCchHHHH
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAG----ASRVIGIDI--DPKKFDRAKNFGVTE--------------FVNPKDHDKPIQQV 256 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g----~~~vi~v~~--~~~~~~~~~~lg~~~--------------v~~~~~~~~~~~~~ 256 (379)
+|.|.|.|.+|..+++.+...+ . .|+++.. +.+.+.++.++...+ +++.+...-.-...
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999988764 5 6666643 334444554433211 11111000000001
Q ss_pred HHHhc-CC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 016978 257 LVDLT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 257 i~~~~-~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
..+.. .. ++|+||+|+|.......+...+..+ ++.|.++.+.
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP~ 123 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHPG 123 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCCC
Confidence 11222 22 8999999999977788888888886 8999888653
No 468
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=93.93 E-value=1.8 Score=37.57 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=61.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.|++|||+|+|.+|.-=+.+....|+ +|+++..+. +.+..+.+.+-...+. +. +.. +.. .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~----~~~---~~~-~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE----FDA---EDL-DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc----cCh---hhh-cCceEEEEeC
Confidence 57899999999999999999999999 788875544 3333332222211111 11 100 011 1489999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCC
Q 016978 273 GNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+.+..-....+.+.+ .+.+|...+..
T Consensus 81 ~d~~ln~~i~~~a~~-~~i~vNv~D~p 106 (210)
T COG1648 81 DDEELNERIAKAARE-RRILVNVVDDP 106 (210)
T ss_pred CCHHHHHHHHHHHHH-hCCceeccCCc
Confidence 997766667777777 48888776543
No 469
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=93.91 E-value=0.58 Score=42.27 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=65.2
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcC-------Cce--EeCCCCCCchHHHHH
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFG-------VTE--FVNPKDHDKPIQQVL 257 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~lg-------~~~--v~~~~~~~~~~~~~i 257 (379)
+...+.++++||-+|+|. |..+..+++..+. .+|++++.+++-++.+++.. .+. ++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~--~~l---- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA--TDL---- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc--ccC----
Confidence 344678899999998852 5567778887653 38999999999887776421 111 111111 110
Q ss_pred HHhcCCCccEEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 016978 258 VDLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 258 ~~~~~~g~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+.++.||.|+-..+ ....+.++.+.|+++ |+++....
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~ 183 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDF 183 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEEC
Confidence 122236999875322 135689999999997 99987754
No 470
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.91 E-value=0.35 Score=43.50 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=48.0
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHH-HHhcCCceEe--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID---PKKFDR-AKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~---~~~~~~-~~~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.++++||+|+ +++|.++++.+...|+ +|+.+.+. +++.+. .++++....+ |..+ ..+..+.+.... .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4789999984 5899999988888999 78776543 233332 2334433222 3222 133333343332 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+.+|++++++|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998763
No 471
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.79 E-value=0.4 Score=47.46 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----HHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-----~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~v 268 (379)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|......... . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence 46799999999999999999999999 7888875542 234566677754433221 1 01257888
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 777665
No 472
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.79 E-value=0.83 Score=42.39 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=61.9
Q ss_pred hhhhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHhc-CCc---eEeCCCCCCchHHH
Q 016978 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNF-GVT---EFVNPKDHDKPIQQ 255 (379)
Q Consensus 183 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~---~~~~l-g~~---~v~~~~~~~~~~~~ 255 (379)
|..+.......+|++||=+|+|. |..+..++. .|+..|++++.++.-.. .++++ +.. ++... +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~-----~--- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL-----G--- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC-----C---
Confidence 33445555677899999999864 666666654 47768999998885433 22222 111 11111 1
Q ss_pred HHHHhcC-CCccEEEEcC-----CC-HHHHHHHHHHhccCCceEEEE
Q 016978 256 VLVDLTD-GGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 256 ~i~~~~~-~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
+..+.. ..||+|+-.. .+ ...+.++.+.|+++ |++++-
T Consensus 180 -ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 -IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred -HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 112222 2799998532 11 35789999999997 999864
No 473
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.77 E-value=0.78 Score=41.19 Aligned_cols=93 Identities=24% Similarity=0.285 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCc---eEeCCCCCCchHHHHHHHhcCCCc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT---EFVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~i~~~~~~g~ 265 (379)
.++.+||=+|+| .|..+..+++. |. +|++++.+++..+.+++. |.. .++.. +..+ +.....+.+
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-----d~~~-l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-----AAQD-IAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-----CHHH-HhhhcCCCC
Confidence 456788888875 46677777775 77 899999999888777653 321 12211 1211 222223479
Q ss_pred cEEEEcC-----CC-HHHHHHHHHHhccCCceEEEE
Q 016978 266 DYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 266 d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+|+-.. .. ...+..+.+.|+++ |.++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9998432 11 35688999999997 999765
No 474
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.77 E-value=0.22 Score=43.58 Aligned_cols=47 Identities=32% Similarity=0.379 Sum_probs=36.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----------hHHHHHHhcC
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKNFG 239 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~----------~~~~~~~~lg 239 (379)
..|.+|+|.|.|.+|..+++++...|++.|.+++.+. +..+..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 3689999999999999999999999994555566665 5666665544
No 475
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.74 E-value=0.42 Score=44.42 Aligned_cols=78 Identities=21% Similarity=0.206 Sum_probs=49.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHH-HhcCC---c-eE--eCCCCCCchHHHHHHHhc--CC
Q 016978 195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGV---T-EF--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~-~~lg~---~-~v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++||+|+ +++|..++..+...| + +|+.+.+++++.+.+ +++.. . ++ .|..+ ..+....+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 678999988 999999888888889 7 888888887765433 33321 1 11 23332 122333333321 24
Q ss_pred CccEEEEcCCC
Q 016978 264 GVDYSFECIGN 274 (379)
Q Consensus 264 g~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998763
No 476
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.71 E-value=0.34 Score=45.99 Aligned_cols=79 Identities=23% Similarity=0.267 Sum_probs=47.6
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCCh---h-------------HHHHHHhcCCce-Ee--CCCCCC
Q 016978 193 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDP---K-------------KFDRAKNFGVTE-FV--NPKDHD 250 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~--a~~la~~~g~~~vi~v~~~~---~-------------~~~~~~~lg~~~-v~--~~~~~~ 250 (379)
..++++||+|+ +++|++ .++.+ ..|+ +++++.... + -.+.+++.|... .+ |..+ +
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-D 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-H
Confidence 44689999988 899999 45566 8899 777775322 1 123455666542 22 2222 1
Q ss_pred ch---HHHHHHHhcCCCccEEEEcCCCH
Q 016978 251 KP---IQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 251 ~~---~~~~i~~~~~~g~d~vid~~g~~ 275 (379)
+. +.+.+.+.. |++|+++++++.+
T Consensus 116 E~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 22 233333332 4799999998874
No 477
>PLN02928 oxidoreductase family protein
Probab=93.71 E-value=0.5 Score=44.60 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
-.|++|.|+|.|.+|..+++.++.+|+ +|++.+++.
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 358999999999999999999999999 999998763
No 478
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.70 E-value=0.4 Score=42.95 Aligned_cols=79 Identities=14% Similarity=0.117 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH-H---hcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-K---NFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~-~---~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.+.++||+|+ |.+|..++..+...|+ +|+.+.+ +.++.+.+ . ..+... .+ |..+ .....+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999988888999 6766544 34433222 2 224322 12 3322 123333333321 2
Q ss_pred CCccEEEEcCCC
Q 016978 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~g~d~vid~~g~ 274 (379)
+++|++|+++|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 379999999874
No 479
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.68 E-value=0.76 Score=42.27 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=36.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 016978 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999987777777888 89999999988887777665
No 480
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.67 E-value=0.5 Score=44.29 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
.++.+||=+|+|. |..+..+++..+..++++++.+++-.+.+++.....-+.... .+..+ + .+..+.+|+|+.+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e~-l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAED-L-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHHh-C-CCCCCceeEEEEcC
Confidence 4678999998865 777777888775458999999988777776542111000000 11110 0 11223799888642
Q ss_pred C------CHHHHHHHHHHhccCCceEEEEcc
Q 016978 273 G------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
. ....+.++.+.|+++ |++++.+.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 1 134678999999997 99987754
No 481
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.67 E-value=1.2 Score=38.44 Aligned_cols=96 Identities=23% Similarity=0.283 Sum_probs=62.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE-eCCCCCCchHHHHHHH-hcCCCccE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVD-LTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v-~~~~~~~~~~~~~i~~-~~~~g~d~ 267 (379)
++.+||-+|+| .|..+..+++.....+|++++.+++..+.+++ .+...+ +.. .+..+.+.. +.++.+|.
T Consensus 40 ~~~~VLDiGcG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~----~d~~~~l~~~~~~~~~D~ 114 (202)
T PRK00121 40 DAPIHLEIGFG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC----GDAVEVLLDMFPDGSLDR 114 (202)
T ss_pred CCCeEEEEccC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe----cCHHHHHHHHcCccccce
Confidence 57889989886 37777778877654489999999988887764 232211 111 222222322 22347898
Q ss_pred EEEcCC--------------CHHHHHHHHHHhccCCceEEEE
Q 016978 268 SFECIG--------------NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~g--------------~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+-... ...+++.+.+.|+++ |.++..
T Consensus 115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~ 155 (202)
T PRK00121 115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFA 155 (202)
T ss_pred EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEE
Confidence 874322 245789999999997 998866
No 482
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=93.65 E-value=0.63 Score=42.46 Aligned_cols=89 Identities=22% Similarity=0.362 Sum_probs=55.6
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEEE-cCChhH--HHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 016978 197 IVAVFGLGTVGLAV-AEGAKAAGASRVIGI-DIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 197 ~VlI~Gag~vG~~a-~~la~~~g~~~vi~v-~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 272 (379)
+|.|+|+|.+|... ..+.+..+. ++.++ +.++++ +++++++|....+. ++...+.. ..+|+|++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~~---~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLAN---PDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhcC---CCCCEEEECC
Confidence 68899999999854 555555566 55554 445543 56778888754432 22222221 2699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 016978 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.......+..++.. |+-++.-.
T Consensus 73 p~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEECC
Confidence 996656666666555 55554433
No 483
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.65 E-value=0.42 Score=42.14 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=45.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHH-HHHh---cCCce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKN---FGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~-~~~~---lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
+++||+|+ |.+|..++..+...|+ +++++.+ ++++.+ ...+ .+... ++ |..+ ...+.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 47899988 9999999999999999 7777766 444332 2222 22211 12 2222 122333333322 236
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 484
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.64 E-value=0.42 Score=42.11 Aligned_cols=70 Identities=24% Similarity=0.316 Sum_probs=48.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 016978 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 198 VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 273 (379)
|+|+|+ |.+|...++.+...+. +|.++.++.. +.+.+++.|+..+ ..+- .+. +.+.+.. .|+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~--~~~-~~l~~al-~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY--DDP-ESLVAAL-KGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T--T-H-HHHHHHH-TTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc--CCH-HHHHHHH-cCCceEEeecC
Confidence 789998 9999999999999888 7888878753 4566778888654 2221 112 2233322 27999998888
No 485
>PLN00016 RNA-binding protein; Provisional
Probab=93.64 E-value=0.65 Score=44.35 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=58.7
Q ss_pred CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-----------HHhcCCceEeCCCCCCchHHHHHH
Q 016978 195 GSIVAVF----GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-----------AKNFGVTEFVNPKDHDKPIQQVLV 258 (379)
Q Consensus 195 g~~VlI~----Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-----------~~~lg~~~v~~~~~~~~~~~~~i~ 258 (379)
..+|||+ |+ |-+|..++..+...|. +|+++.+++++.+. +...|...+. . +..+ +.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~-----D~~d-~~ 123 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G-----DPAD-VK 123 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e-----cHHH-HH
Confidence 4689999 98 9999999998888998 89999887654221 1223443322 1 1211 22
Q ss_pred HhcCC-CccEEEEcCCCH-HHHHHHHHHhccC-CceEEEEcc
Q 016978 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKG-WGTSVIVGV 297 (379)
Q Consensus 259 ~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~-~G~iv~~g~ 297 (379)
+.... ++|+|+++.+.. .....+++.+... -.++|.++.
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 22223 799999987652 2244555655542 136887654
No 486
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.64 E-value=0.68 Score=40.79 Aligned_cols=101 Identities=25% Similarity=0.316 Sum_probs=65.5
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCc-------eEeCCCCCCchHHHHHHH
Q 016978 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVT-------EFVNPKDHDKPIQQVLVD 259 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~lg~~-------~v~~~~~~~~~~~~~i~~ 259 (379)
......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.. .++..+. .+. .
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~ 116 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDA--EAL-----P 116 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEeccc--ccC-----C
Confidence 334456788999999976 788888888775 23999999999887777764211 1111111 110 0
Q ss_pred hcCCCccEEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 016978 260 LTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 260 ~~~~g~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
...+.+|+|+-..+ ....+..+...|+++ |.++.+..
T Consensus 117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~ 159 (239)
T PRK00216 117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF 159 (239)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence 12236898874321 245678888999997 99887754
No 487
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.63 E-value=0.46 Score=43.21 Aligned_cols=94 Identities=18% Similarity=0.196 Sum_probs=65.5
Q ss_pred cccccchhhhhhhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCc
Q 016978 174 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 174 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 251 (379)
..||+....+. +++..++ -.|++|+|+|- ..+|.-+++++...|+ +|+.+.+.. .
T Consensus 138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------~ 194 (285)
T PRK10792 138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC---------------------C
Confidence 45655444444 3454444 36999999998 5599999999999999 788773321 1
Q ss_pred hHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 252 ~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.++ .+|+++.++|.+.++.. ..++++ ..++.+|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 48999999999886554 778896 888899853
No 488
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.58 E-value=0.88 Score=36.12 Aligned_cols=86 Identities=17% Similarity=0.304 Sum_probs=53.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChh--H-HHHHHhcCCceEeCCCCCCchHHHHHH-------------
Q 016978 198 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPK--K-FDRAKNFGVTEFVNPKDHDKPIQQVLV------------- 258 (379)
Q Consensus 198 VlI~Ga-g~vG~~a~~la~~~g--~~~vi~v~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~~~i~------------- 258 (379)
|.|+|+ |.+|..++.+.+... + +|++...... + .+.++++.+..++..++ ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 578899 999999999999987 5 7777654332 2 35566788888766554 2222222
Q ss_pred -------HhcC-CCccEEEEcCCCHHHHHHHHHHhcc
Q 016978 259 -------DLTD-GGVDYSFECIGNVSVMRAALECCHK 287 (379)
Q Consensus 259 -------~~~~-~g~d~vid~~g~~~~~~~~~~~l~~ 287 (379)
+... ..+|+|+.++.+..-+.-.+..+..
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~ 113 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA 113 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC
Confidence 2222 2677777776665656666777776
No 489
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.57 E-value=0.58 Score=39.68 Aligned_cols=92 Identities=17% Similarity=0.193 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce--EeCCCCCCchHHHHHHHhcCCCccE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~i~~~~~~g~d~ 267 (379)
++++||=+|+| .|.+++.+++.....+|++++.+++..+.++ +.+.+. ++.. +..+ + ...+.+|+
T Consensus 42 ~~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~-----d~~~-~--~~~~~fD~ 112 (181)
T TIGR00138 42 DGKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG-----RAED-F--QHEEQFDV 112 (181)
T ss_pred CCCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec-----chhh-c--cccCCccE
Confidence 37899989874 3555556665554348999999988665554 345432 2221 1211 1 11237998
Q ss_pred EEEcC-CC-HHHHHHHHHHhccCCceEEEE
Q 016978 268 SFECI-GN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~-g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+-.. .. +..++.+.+.|+++ |+++..
T Consensus 113 I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 113 ITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 88532 22 35567788889997 998865
No 490
>PRK06849 hypothetical protein; Provisional
Probab=93.54 E-value=0.64 Score=44.62 Aligned_cols=92 Identities=21% Similarity=0.177 Sum_probs=57.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC---CCCCCchHHHHHHHhcCC-CccEE
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN---PKDHDKPIQQVLVDLTDG-GVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~---~~~~~~~~~~~i~~~~~~-g~d~v 268 (379)
...+|||+|+ .+.|+..+..++..|. +|+++++++...... +..++..+. +......+.+.+.++... ++|+|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~-s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRF-SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHH-HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3589999998 6689999999999999 899998876543321 122333221 222224566777665555 89999
Q ss_pred EEcCCCHHHHHHHHHHhcc
Q 016978 269 FECIGNVSVMRAALECCHK 287 (379)
Q Consensus 269 id~~g~~~~~~~~~~~l~~ 287 (379)
|-+......+......+.+
T Consensus 81 IP~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSA 99 (389)
T ss_pred EECChHHHhHHhhhhhhcC
Confidence 9776543223333344555
No 491
>PLN02686 cinnamoyl-CoA reductase
Probab=93.51 E-value=0.47 Score=45.18 Aligned_cols=44 Identities=18% Similarity=0.171 Sum_probs=34.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
..+++|||+|+ |.+|..++..+...|+ +|+++.++.++.+.+++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 44789999988 9999999999999999 78776666655444433
No 492
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.49 E-value=0.57 Score=36.14 Aligned_cols=93 Identities=28% Similarity=0.402 Sum_probs=57.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc---eEeCCCCCCchHHHHHHHhcCCCccE
Q 016978 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~~~~~~g~d~ 267 (379)
|.+||-.|+| .|..++.+++.. ..++++++.+++..++++. .+.+ .++. .++.+.......+.+|+
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~D~ 73 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV-----GDARDLPEPLPDGKFDL 73 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE-----SHHHHHHHTCTTT-EEE
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE-----CchhhchhhccCceeEE
Confidence 5678887653 244444444444 4499999999998888875 2221 1221 34444443444458999
Q ss_pred EEEcC--CC------------HHHHHHHHHHhccCCceEEEE
Q 016978 268 SFECI--GN------------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~--g~------------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+-.- +. ..++..+.+.|+++ |.++.+
T Consensus 74 Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 74 IVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 88521 11 24588999999997 998765
No 493
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.49 E-value=0.34 Score=45.33 Aligned_cols=93 Identities=16% Similarity=0.156 Sum_probs=60.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEE
Q 016978 193 EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~vi 269 (379)
-.+++|+|+|| |.+|..+++.+.. .|..+++.+.+++++.+.+. +++...+ .++ .+.. ..+|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~l----~~~l-~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LSL----EEAL-PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------HhH----HHHH-ccCCEEE
Confidence 36789999999 9999988877754 56668999988887776554 3321110 112 2221 2589999
Q ss_pred EcCCCHHHHHHHHHHhccCCceEEEEccC
Q 016978 270 ECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 270 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+++.+..+..-...++++ -.+++++.+
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYP 248 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence 9988754321122345664 677788765
No 494
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.45 E-value=0.72 Score=43.13 Aligned_cols=94 Identities=19% Similarity=0.124 Sum_probs=62.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe------CCCC-CCchHHHHHHHhcCCCccEE
Q 016978 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV------NPKD-HDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~------~~~~-~~~~~~~~i~~~~~~g~d~v 268 (379)
-+|.|+|+|.+|.+.+..+...|. .|+..++++++.+.+.+.+..... ...- ...+..+.+ ...|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 378999999999999998888898 899999988877766654211000 0000 001222221 258999
Q ss_pred EEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 016978 269 FECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 269 id~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
|-|+.+.. +...+..++++ -.++.+..
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 99998854 67788888885 66665544
No 495
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.45 E-value=0.38 Score=42.69 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=46.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHH----HHhcCCce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 016978 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v-~~~~~~~~~----~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~g 264 (379)
++|||+|+ |++|...++.+...|+ +|+.+ .+++++.+. ++..+... .+ |..+ ..++.+.+.+.. .++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence 57999988 9999999999888999 66654 445444332 22233222 11 2222 133333333332 237
Q ss_pred ccEEEEcCCC
Q 016978 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999998873
No 496
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.43 E-value=0.57 Score=45.90 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 016978 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~g~d~vid~ 271 (379)
....+|+|.|.|.+|..+++.+...|. .|++++.++++.+.+++.+.+ .++.-+. .-.+.+.+..-..+|.|+-+
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd~---~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGDG---TDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECCC---CCHHHHHhcCCccCCEEEEC
Confidence 346889999999999999999999999 899999999988877764322 2222221 11233444333378999987
Q ss_pred CCC
Q 016978 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
++.
T Consensus 305 ~~~ 307 (453)
T PRK09496 305 TND 307 (453)
T ss_pred CCC
Confidence 776
No 497
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.42 E-value=0.91 Score=42.50 Aligned_cols=37 Identities=32% Similarity=0.441 Sum_probs=33.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|.+|.|+|.|.+|...++.++..|. +|++.+++++.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence 67899999999999999999999999 89999887654
No 498
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.42 E-value=0.46 Score=42.20 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH-HhcCCce-Ee--CCCCCCchHHHHHHH---hcCCC
Q 016978 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVD---LTDGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~---~~~~g 264 (379)
.++++||+|+ |.+|..++..+...|+ +|+.+. +++++.+.+ .+++... ++ |..+ ..++.+.+.+ ....+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3578999988 9999999998888999 676653 344444333 3343222 22 2222 1233333333 22224
Q ss_pred ccEEEEcCC
Q 016978 265 VDYSFECIG 273 (379)
Q Consensus 265 ~d~vid~~g 273 (379)
+|++|+++|
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 999999875
No 499
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.37 E-value=0.4 Score=46.97 Aligned_cols=70 Identities=29% Similarity=0.364 Sum_probs=48.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHH----HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEE
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~-~~~----~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~g~d~v 268 (379)
.+++|+|+|+|.+|+.+++.+...|+ +|++++..+ +.. +.+.++|...+. .+. .+ +. .+++|+|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~--~~------~~-~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVL-GEY--PE------EF-LEGVDLV 72 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCc--ch------hH-hhcCCEE
Confidence 47899999998899999999999999 899998764 222 334455654322 221 11 11 1368999
Q ss_pred EEcCCC
Q 016978 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
+.+.|.
T Consensus 73 v~~~g~ 78 (450)
T PRK14106 73 VVSPGV 78 (450)
T ss_pred EECCCC
Confidence 998875
No 500
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.35 E-value=0.47 Score=45.57 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 016978 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|||+|+|++|..++..+..+|..+++.+|..
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 45799999999999999999999999899988754
Done!