Query 016981
Match_columns 379
No_of_seqs 483 out of 3842
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:59:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bus_A REBM, methyltransferase 100.0 5.2E-28 1.8E-32 221.1 24.4 223 97-332 7-229 (273)
2 2o57_A Putative sarcosine dime 100.0 9.4E-28 3.2E-32 222.2 20.7 223 92-330 16-245 (297)
3 3hem_A Cyclopropane-fatty-acyl 99.9 4.7E-25 1.6E-29 204.6 28.0 217 94-325 15-249 (302)
4 1kpg_A CFA synthase;, cyclopro 99.9 1.7E-25 5.9E-30 205.9 22.9 216 96-323 9-232 (287)
5 2fk8_A Methoxy mycolic acid sy 99.9 2.5E-24 8.5E-29 201.1 17.0 218 93-322 32-257 (318)
6 3vc1_A Geranyl diphosphate 2-C 99.9 3.2E-24 1.1E-28 199.9 15.7 176 141-330 104-280 (312)
7 1nkv_A Hypothetical protein YJ 99.9 1.5E-22 5.1E-27 182.9 18.6 163 141-318 24-186 (256)
8 1vl5_A Unknown conserved prote 99.9 1.4E-22 5E-27 183.6 18.4 169 141-322 25-193 (260)
9 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.3E-22 4.3E-27 183.9 17.8 154 158-317 70-243 (261)
10 3f4k_A Putative methyltransfer 99.9 1.3E-22 4.4E-27 183.4 17.6 153 158-321 46-198 (257)
11 3kkz_A Uncharacterized protein 99.9 4.4E-22 1.5E-26 181.1 18.6 152 158-320 46-197 (267)
12 1xxl_A YCGJ protein; structura 99.9 1.9E-21 6.6E-26 174.1 21.8 169 141-322 9-177 (239)
13 3ujc_A Phosphoethanolamine N-m 99.9 2E-22 6.9E-27 182.8 15.3 167 141-324 43-211 (266)
14 3mgg_A Methyltransferase; NYSG 99.9 1.3E-21 4.4E-26 178.8 18.8 166 158-326 37-205 (276)
15 4htf_A S-adenosylmethionine-de 99.9 9.8E-22 3.4E-26 180.6 17.7 177 139-323 55-236 (285)
16 3h2b_A SAM-dependent methyltra 99.9 2.8E-22 9.6E-27 174.7 13.4 179 98-321 4-184 (203)
17 3dh0_A SAM dependent methyltra 99.9 2.1E-21 7.1E-26 171.2 19.1 155 143-321 27-183 (219)
18 3dtn_A Putative methyltransfer 99.9 2.7E-22 9.2E-27 178.8 13.3 163 158-324 44-219 (234)
19 3hnr_A Probable methyltransfer 99.9 1.1E-22 3.7E-27 179.6 10.2 149 159-318 46-200 (220)
20 3dlc_A Putative S-adenosyl-L-m 99.9 5.2E-22 1.8E-26 174.6 14.5 167 140-318 31-202 (219)
21 3bkx_A SAM-dependent methyltra 99.9 5.8E-21 2E-25 174.4 21.5 185 134-325 24-225 (275)
22 3l8d_A Methyltransferase; stru 99.9 1.7E-21 5.8E-26 174.3 16.1 149 159-321 54-202 (242)
23 3ege_A Putative methyltransfer 99.9 7.6E-22 2.6E-26 179.1 13.4 163 141-325 22-184 (261)
24 2ex4_A Adrenal gland protein A 99.9 1.7E-21 5.7E-26 174.6 14.8 198 92-320 27-226 (241)
25 3ou2_A SAM-dependent methyltra 99.9 6E-21 2.1E-25 167.8 17.6 189 94-318 6-204 (218)
26 4fsd_A Arsenic methyltransfera 99.9 4E-21 1.4E-25 184.0 17.3 154 157-318 82-250 (383)
27 1xtp_A LMAJ004091AAA; SGPP, st 99.9 4.7E-21 1.6E-25 172.8 16.1 188 95-319 49-238 (254)
28 2p7i_A Hypothetical protein; p 99.9 4.3E-21 1.5E-25 172.1 14.9 153 159-320 43-200 (250)
29 2yqz_A Hypothetical protein TT 99.9 4.7E-21 1.6E-25 173.6 15.1 157 158-319 39-196 (263)
30 3ocj_A Putative exported prote 99.9 1.2E-20 4E-25 175.2 16.9 161 158-319 118-291 (305)
31 3gu3_A Methyltransferase; alph 99.9 1E-20 3.4E-25 173.9 16.2 155 158-317 22-188 (284)
32 1pjz_A Thiopurine S-methyltran 99.8 5.8E-21 2E-25 166.6 12.9 155 141-321 10-178 (203)
33 3ccf_A Cyclopropane-fatty-acyl 99.8 6.4E-21 2.2E-25 174.6 13.1 153 159-323 58-214 (279)
34 3lcc_A Putative methyl chlorid 99.8 1.4E-20 4.7E-25 167.9 14.6 145 159-325 67-213 (235)
35 3dli_A Methyltransferase; PSI- 99.8 2.4E-20 8.2E-25 166.9 15.0 141 158-320 41-185 (240)
36 3sm3_A SAM-dependent methyltra 99.8 2.5E-20 8.6E-25 165.7 15.0 159 158-320 30-208 (235)
37 3g5l_A Putative S-adenosylmeth 99.8 4E-20 1.4E-24 166.7 15.6 159 158-321 44-218 (253)
38 3e23_A Uncharacterized protein 99.8 3.6E-20 1.2E-24 162.3 14.5 137 159-320 44-183 (211)
39 1ri5_A MRNA capping enzyme; me 99.8 6.9E-20 2.4E-24 168.9 16.9 164 159-322 65-253 (298)
40 4hg2_A Methyltransferase type 99.8 2.7E-20 9.3E-25 168.0 13.3 100 159-267 40-139 (257)
41 3g5t_A Trans-aconitate 3-methy 99.8 1.4E-19 4.7E-24 167.4 18.1 160 158-321 36-211 (299)
42 3e8s_A Putative SAM dependent 99.8 9.7E-21 3.3E-25 167.4 9.2 153 159-321 53-211 (227)
43 3jwh_A HEN1; methyltransferase 99.8 7.4E-20 2.5E-24 161.1 13.8 148 159-315 30-188 (217)
44 3gwz_A MMCR; methyltransferase 99.8 1.4E-18 4.8E-23 165.4 23.3 163 141-318 190-355 (369)
45 2p35_A Trans-aconitate 2-methy 99.8 1.6E-19 5.4E-24 163.2 16.0 157 141-314 21-185 (259)
46 3fpf_A Mtnas, putative unchara 99.8 1.2E-19 4.3E-24 164.8 15.1 159 91-263 61-222 (298)
47 3i9f_A Putative type 11 methyl 99.8 6.7E-20 2.3E-24 155.0 12.0 132 159-320 18-149 (170)
48 3i53_A O-methyltransferase; CO 99.8 4.2E-19 1.4E-23 166.7 18.7 151 158-320 169-322 (332)
49 2aot_A HMT, histamine N-methyl 99.8 4.2E-19 1.4E-23 163.6 18.2 148 158-316 52-218 (292)
50 1vlm_A SAM-dependent methyltra 99.8 2.4E-19 8.3E-24 158.1 15.5 138 159-319 48-188 (219)
51 1x19_A CRTF-related protein; m 99.8 5.9E-19 2E-23 167.5 18.6 167 140-320 177-349 (359)
52 4e2x_A TCAB9; kijanose, tetron 99.8 2E-20 6.8E-25 181.1 8.6 163 134-320 88-254 (416)
53 3jwg_A HEN1, methyltransferase 99.8 1.1E-19 3.7E-24 160.3 12.4 149 159-316 30-189 (219)
54 2r3s_A Uncharacterized protein 99.8 1.3E-18 4.5E-23 163.3 19.9 167 142-320 152-324 (335)
55 3dp7_A SAM-dependent methyltra 99.8 3.4E-19 1.2E-23 169.3 15.8 156 159-317 180-340 (363)
56 2gs9_A Hypothetical protein TT 99.8 7.5E-19 2.6E-23 153.9 16.8 131 158-310 36-171 (211)
57 2gb4_A Thiopurine S-methyltran 99.8 5.6E-19 1.9E-23 159.0 16.4 141 159-320 69-228 (252)
58 3g2m_A PCZA361.24; SAM-depende 99.8 1.1E-19 3.6E-24 168.2 11.7 174 141-323 71-278 (299)
59 3bkw_A MLL3908 protein, S-aden 99.8 1.1E-18 3.9E-23 155.9 17.9 152 159-319 44-214 (243)
60 2a14_A Indolethylamine N-methy 99.8 2.6E-20 9E-25 169.1 7.0 148 158-320 55-239 (263)
61 3pfg_A N-methyltransferase; N, 99.8 3.4E-19 1.2E-23 161.6 13.9 100 159-266 51-154 (263)
62 3cc8_A Putative methyltransfer 99.8 2.2E-18 7.5E-23 152.4 18.7 146 158-323 32-189 (230)
63 1y8c_A S-adenosylmethionine-de 99.8 5.4E-19 1.8E-23 158.2 14.7 103 158-264 37-143 (246)
64 2xvm_A Tellurite resistance pr 99.8 1.3E-18 4.3E-23 150.7 16.3 139 159-319 33-173 (199)
65 1qzz_A RDMB, aclacinomycin-10- 99.8 2.6E-18 9E-23 163.8 18.9 165 143-321 172-341 (374)
66 1ve3_A Hypothetical protein PH 99.8 4.9E-18 1.7E-22 150.2 18.3 104 159-265 39-144 (227)
67 2kw5_A SLR1183 protein; struct 99.8 1.3E-18 4.4E-23 151.3 13.2 143 159-323 31-175 (202)
68 3lst_A CALO1 methyltransferase 99.8 3.6E-18 1.2E-22 161.3 16.4 160 142-318 173-335 (348)
69 2g72_A Phenylethanolamine N-me 99.8 5.1E-19 1.7E-23 162.8 10.0 149 158-321 71-258 (289)
70 3g07_A 7SK snRNA methylphospha 99.8 3.3E-19 1.1E-23 164.3 8.4 152 158-318 46-268 (292)
71 3thr_A Glycine N-methyltransfe 99.8 4.1E-18 1.4E-22 156.9 15.4 105 159-264 58-176 (293)
72 3mcz_A O-methyltransferase; ad 99.8 4.5E-18 1.6E-22 160.9 15.8 153 159-316 180-336 (352)
73 3d2l_A SAM-dependent methyltra 99.8 5.1E-18 1.7E-22 151.7 15.1 100 159-263 34-137 (243)
74 2ip2_A Probable phenazine-spec 99.8 7.5E-18 2.6E-22 158.2 16.7 163 142-319 157-322 (334)
75 1tw3_A COMT, carminomycin 4-O- 99.8 1.1E-17 3.7E-22 158.8 17.9 164 143-320 173-340 (360)
76 2p8j_A S-adenosylmethionine-de 99.8 1.3E-18 4.6E-23 151.9 10.8 156 159-319 24-183 (209)
77 3bxo_A N,N-dimethyltransferase 99.8 6.4E-18 2.2E-22 150.6 15.2 101 159-267 41-145 (239)
78 3ggd_A SAM-dependent methyltra 99.8 5.2E-18 1.8E-22 152.0 14.1 155 158-323 56-223 (245)
79 3e05_A Precorrin-6Y C5,15-meth 99.8 4.9E-17 1.7E-21 141.6 19.7 136 143-318 30-166 (204)
80 3orh_A Guanidinoacetate N-meth 99.8 2.9E-19 9.9E-24 159.6 5.5 104 158-263 60-170 (236)
81 2vdw_A Vaccinia virus capping 99.8 7.7E-18 2.6E-22 155.6 14.0 163 158-320 48-247 (302)
82 3njr_A Precorrin-6Y methylase; 99.8 4.6E-17 1.6E-21 142.0 18.0 133 144-317 46-178 (204)
83 2i62_A Nicotinamide N-methyltr 99.7 4.4E-18 1.5E-22 154.1 11.7 149 158-321 56-241 (265)
84 3reo_A (ISO)eugenol O-methyltr 99.7 5.7E-17 1.9E-21 154.2 19.4 150 158-320 203-356 (368)
85 3p9c_A Caffeic acid O-methyltr 99.7 7.8E-17 2.7E-21 153.0 19.9 162 141-320 188-354 (364)
86 2qe6_A Uncharacterized protein 99.7 7.1E-17 2.4E-21 147.2 18.1 161 138-315 61-238 (274)
87 3cgg_A SAM-dependent methyltra 99.7 2.3E-17 8E-22 141.9 13.6 125 159-318 47-174 (195)
88 3ofk_A Nodulation protein S; N 99.7 1.3E-17 4.3E-22 146.6 12.0 102 158-264 51-155 (216)
89 3hm2_A Precorrin-6Y C5,15-meth 99.7 4.1E-17 1.4E-21 138.6 14.6 136 142-317 14-151 (178)
90 1zx0_A Guanidinoacetate N-meth 99.7 2.6E-18 8.9E-23 153.3 7.3 104 159-264 61-171 (236)
91 3m70_A Tellurite resistance pr 99.7 2.1E-17 7E-22 151.7 12.9 136 159-317 121-258 (286)
92 4a6d_A Hydroxyindole O-methylt 99.7 9E-17 3.1E-21 151.9 16.9 163 143-319 169-334 (353)
93 1fp1_D Isoliquiritigenin 2'-O- 99.7 4.6E-17 1.6E-21 155.1 14.8 160 142-319 197-360 (372)
94 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.4E-16 4.8E-21 139.8 16.2 128 159-317 42-180 (214)
95 2avn_A Ubiquinone/menaquinone 99.7 1.1E-16 3.8E-21 144.8 14.8 151 159-321 55-215 (260)
96 3grz_A L11 mtase, ribosomal pr 99.7 1.1E-16 3.8E-21 139.4 14.0 125 159-319 61-185 (205)
97 1xdz_A Methyltransferase GIDB; 99.7 5E-17 1.7E-21 145.4 12.1 132 158-322 70-205 (240)
98 3evz_A Methyltransferase; NYSG 99.7 1.8E-16 6E-21 140.7 15.3 129 158-317 55-204 (230)
99 2zfu_A Nucleomethylin, cerebra 99.7 2.9E-17 9.9E-22 144.2 10.1 111 159-318 68-178 (215)
100 3mti_A RRNA methylase; SAM-dep 99.7 9.5E-17 3.3E-21 137.5 12.4 106 158-265 22-137 (185)
101 3mq2_A 16S rRNA methyltransfer 99.7 3.9E-17 1.3E-21 143.7 9.4 149 159-321 28-186 (218)
102 1fbn_A MJ fibrillarin homologu 99.7 1.5E-16 5.2E-21 141.3 13.3 133 158-320 74-214 (230)
103 3m33_A Uncharacterized protein 99.7 4.7E-17 1.6E-21 144.2 9.9 118 159-320 49-168 (226)
104 2fca_A TRNA (guanine-N(7)-)-me 99.7 2.3E-16 7.7E-21 138.5 13.9 104 159-263 39-153 (213)
105 1fp2_A Isoflavone O-methyltran 99.7 2.7E-16 9.1E-21 148.7 15.2 146 159-318 189-340 (352)
106 2b3t_A Protein methyltransfera 99.7 5.8E-16 2E-20 141.4 16.8 139 140-317 97-261 (276)
107 4df3_A Fibrillarin-like rRNA/T 99.7 4.2E-16 1.4E-20 137.4 15.1 139 155-319 74-217 (233)
108 3p9n_A Possible methyltransfer 99.7 4.7E-16 1.6E-20 133.7 15.1 107 159-266 45-156 (189)
109 3lpm_A Putative methyltransfer 99.7 3.9E-16 1.3E-20 141.2 15.1 130 159-319 50-201 (259)
110 1wzn_A SAM-dependent methyltra 99.7 3.6E-16 1.2E-20 140.5 14.6 116 139-263 27-145 (252)
111 3bgv_A MRNA CAP guanine-N7 met 99.7 2.8E-16 9.6E-21 146.1 14.2 107 159-265 35-157 (313)
112 1l3i_A Precorrin-6Y methyltran 99.7 3.6E-16 1.2E-20 134.0 13.8 130 144-313 24-154 (192)
113 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.6E-16 5.6E-21 139.8 11.1 104 159-263 35-150 (218)
114 3p2e_A 16S rRNA methylase; met 99.7 7.3E-17 2.5E-21 142.8 8.8 153 159-322 25-188 (225)
115 3uwp_A Histone-lysine N-methyl 99.7 1.8E-16 6.1E-21 149.2 11.9 125 137-267 157-292 (438)
116 3mb5_A SAM-dependent methyltra 99.7 5.6E-16 1.9E-20 139.6 14.7 136 143-319 83-222 (255)
117 3eey_A Putative rRNA methylase 99.7 1.4E-16 4.9E-21 137.8 10.1 107 159-265 23-141 (197)
118 3q87_B N6 adenine specific DNA 99.7 5.4E-16 1.8E-20 131.1 13.2 119 159-321 24-151 (170)
119 2h00_A Methyltransferase 10 do 99.7 2.5E-16 8.6E-21 141.9 11.7 149 158-320 65-239 (254)
120 2nxc_A L11 mtase, ribosomal pr 99.7 2.9E-16 9.9E-21 141.6 11.9 123 159-318 121-243 (254)
121 2pwy_A TRNA (adenine-N(1)-)-me 99.7 6.2E-16 2.1E-20 139.4 14.1 135 143-318 86-223 (258)
122 1dus_A MJ0882; hypothetical pr 99.7 8E-16 2.7E-20 132.1 14.1 118 141-265 40-159 (194)
123 3lbf_A Protein-L-isoaspartate 99.7 9.2E-16 3.1E-20 134.0 14.7 112 141-265 65-176 (210)
124 2yxd_A Probable cobalt-precorr 99.7 1.8E-15 6.1E-20 128.7 16.0 132 141-316 23-154 (183)
125 3g89_A Ribosomal RNA small sub 99.7 2.7E-16 9.1E-21 141.3 11.3 132 158-322 80-215 (249)
126 1yb2_A Hypothetical protein TA 99.7 4.3E-16 1.5E-20 142.2 12.0 133 144-318 101-236 (275)
127 3htx_A HEN1; HEN1, small RNA m 99.7 1.7E-15 6E-20 152.5 17.3 105 159-265 722-836 (950)
128 2frn_A Hypothetical protein PH 99.7 1.1E-15 3.7E-20 139.7 14.3 128 159-315 126-253 (278)
129 4dzr_A Protein-(glutamine-N5) 99.7 9.8E-17 3.3E-21 140.3 6.7 142 139-317 15-190 (215)
130 3giw_A Protein of unknown func 99.7 9.3E-16 3.2E-20 137.7 13.1 163 138-315 62-243 (277)
131 3fzg_A 16S rRNA methylase; met 99.6 1.8E-16 6.1E-21 133.7 7.1 102 159-263 50-152 (200)
132 2fyt_A Protein arginine N-meth 99.6 1.5E-15 5E-20 142.8 14.1 101 159-260 65-168 (340)
133 1zg3_A Isoflavanone 4'-O-methy 99.6 1E-15 3.4E-20 145.1 13.1 147 159-318 194-346 (358)
134 2pxx_A Uncharacterized protein 99.6 2.9E-16 1E-20 137.3 8.5 105 158-265 42-161 (215)
135 1jsx_A Glucose-inhibited divis 99.6 1.8E-15 6E-20 131.9 13.1 99 159-263 66-165 (207)
136 3iv6_A Putative Zn-dependent a 99.6 9.9E-16 3.4E-20 137.8 11.3 113 141-264 33-149 (261)
137 1o54_A SAM-dependent O-methylt 99.6 2.3E-15 7.8E-20 137.5 14.0 135 143-318 102-238 (277)
138 3q7e_A Protein arginine N-meth 99.6 1.7E-15 6E-20 142.8 13.1 102 159-261 67-171 (349)
139 3dmg_A Probable ribosomal RNA 99.6 2.8E-15 9.5E-20 142.6 14.5 103 158-263 233-340 (381)
140 3ntv_A MW1564 protein; rossman 99.6 4.2E-15 1.4E-19 132.1 14.1 104 159-265 72-178 (232)
141 2ld4_A Anamorsin; methyltransf 99.6 8.5E-16 2.9E-20 130.5 8.8 113 158-311 12-128 (176)
142 2ift_A Putative methylase HI07 99.6 1.3E-15 4.4E-20 132.4 10.0 106 159-265 54-165 (201)
143 3lec_A NADB-rossmann superfami 99.6 4E-15 1.4E-19 130.7 12.8 126 158-317 21-147 (230)
144 1nt2_A Fibrillarin-like PRE-rR 99.6 4.4E-15 1.5E-19 129.9 12.9 100 158-263 57-161 (210)
145 2b25_A Hypothetical protein; s 99.6 2.5E-15 8.7E-20 141.1 12.2 157 143-320 95-282 (336)
146 3u81_A Catechol O-methyltransf 99.6 2.1E-15 7.2E-20 133.0 10.9 106 159-265 59-172 (221)
147 3r0q_C Probable protein argini 99.6 3.8E-15 1.3E-19 141.9 13.4 104 158-263 63-169 (376)
148 3tfw_A Putative O-methyltransf 99.6 1.4E-14 4.9E-19 130.0 16.3 104 159-265 64-172 (248)
149 1dl5_A Protein-L-isoaspartate 99.6 7.2E-15 2.5E-19 136.8 14.7 113 140-264 62-176 (317)
150 2fhp_A Methylase, putative; al 99.6 3.1E-15 1.1E-19 127.9 11.3 107 159-266 45-157 (187)
151 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3E-15 1E-19 133.3 11.3 104 159-263 47-168 (235)
152 1i9g_A Hypothetical protein RV 99.6 6.4E-15 2.2E-19 134.6 13.8 113 142-264 88-204 (280)
153 3dr5_A Putative O-methyltransf 99.6 4.1E-15 1.4E-19 131.1 12.1 119 139-265 42-165 (221)
154 2yxe_A Protein-L-isoaspartate 99.6 9.9E-15 3.4E-19 127.9 14.5 112 141-264 65-178 (215)
155 2esr_A Methyltransferase; stru 99.6 1.2E-15 4E-20 129.6 8.2 120 141-266 18-141 (177)
156 2fpo_A Methylase YHHF; structu 99.6 4E-15 1.4E-19 129.4 11.6 104 159-264 55-161 (202)
157 1g6q_1 HnRNP arginine N-methyl 99.6 1.2E-14 4.1E-19 135.9 15.6 102 159-261 39-143 (328)
158 1u2z_A Histone-lysine N-methyl 99.6 6.9E-15 2.3E-19 141.1 14.1 120 140-265 229-361 (433)
159 3bzb_A Uncharacterized protein 99.6 1.5E-14 5.2E-19 132.3 15.8 134 159-317 80-235 (281)
160 2ipx_A RRNA 2'-O-methyltransfe 99.6 6.4E-15 2.2E-19 131.0 12.9 100 158-263 77-182 (233)
161 1vbf_A 231AA long hypothetical 99.6 1E-14 3.5E-19 129.3 14.1 109 141-264 58-166 (231)
162 3gdh_A Trimethylguanosine synt 99.6 2.7E-16 9.2E-21 140.5 3.8 137 159-317 79-217 (241)
163 3kr9_A SAM-dependent methyltra 99.6 7.8E-15 2.7E-19 128.6 13.0 125 158-317 15-141 (225)
164 3gnl_A Uncharacterized protein 99.6 6.6E-15 2.3E-19 130.3 12.2 126 158-317 21-147 (244)
165 3bwc_A Spermidine synthase; SA 99.6 4.3E-15 1.5E-19 137.4 10.8 138 159-322 96-243 (304)
166 3hp7_A Hemolysin, putative; st 99.6 6.6E-15 2.3E-19 134.0 11.7 150 141-319 72-232 (291)
167 2y1w_A Histone-arginine methyl 99.6 1.1E-14 3.8E-19 137.2 13.7 102 159-262 51-154 (348)
168 3duw_A OMT, O-methyltransferas 99.6 2.4E-14 8.1E-19 126.2 14.9 104 159-265 59-169 (223)
169 1af7_A Chemotaxis receptor met 99.6 3.3E-15 1.1E-19 135.5 9.5 104 159-262 106-251 (274)
170 2gpy_A O-methyltransferase; st 99.6 1.5E-14 5E-19 128.6 13.3 104 159-265 55-162 (233)
171 4azs_A Methyltransferase WBDD; 99.6 3.5E-15 1.2E-19 149.6 10.0 105 159-265 67-175 (569)
172 3r3h_A O-methyltransferase, SA 99.6 4.2E-15 1.4E-19 133.0 9.1 107 159-268 61-175 (242)
173 3id6_C Fibrillarin-like rRNA/T 99.6 8.8E-14 3E-18 122.8 17.2 136 157-319 75-216 (232)
174 4dcm_A Ribosomal RNA large sub 99.6 1.9E-14 6.6E-19 136.7 13.5 104 159-263 223-334 (375)
175 1i1n_A Protein-L-isoaspartate 99.6 2.9E-14 9.8E-19 126.0 13.7 101 158-264 77-183 (226)
176 2ozv_A Hypothetical protein AT 99.6 1.3E-14 4.4E-19 131.2 11.5 105 159-263 37-170 (260)
177 3c3p_A Methyltransferase; NP_9 99.6 2.1E-14 7.2E-19 125.4 12.4 103 159-265 57-162 (210)
178 2yvl_A TRMI protein, hypotheti 99.6 6.4E-14 2.2E-18 125.4 15.8 110 143-263 81-190 (248)
179 1ixk_A Methyltransferase; open 99.6 3.4E-14 1.2E-18 132.0 14.5 131 158-316 118-272 (315)
180 1o9g_A RRNA methyltransferase; 99.6 9.9E-15 3.4E-19 131.2 10.2 120 140-264 38-215 (250)
181 1jg1_A PIMT;, protein-L-isoasp 99.6 2.5E-14 8.6E-19 127.3 12.7 111 141-264 79-190 (235)
182 1g8a_A Fibrillarin-like PRE-rR 99.6 7.2E-14 2.5E-18 123.5 15.1 99 158-262 73-177 (227)
183 3opn_A Putative hemolysin; str 99.5 2.3E-15 7.9E-20 133.6 5.1 153 141-319 24-184 (232)
184 1ws6_A Methyltransferase; stru 99.5 6.9E-15 2.3E-19 123.8 7.4 103 159-266 42-150 (171)
185 3tr6_A O-methyltransferase; ce 99.5 2.1E-14 7.2E-19 126.7 10.7 105 159-266 65-177 (225)
186 2vdv_E TRNA (guanine-N(7)-)-me 99.5 5E-14 1.7E-18 126.3 13.0 105 158-263 49-173 (246)
187 3tma_A Methyltransferase; thum 99.5 1.5E-13 5.2E-18 129.8 16.9 117 141-263 191-317 (354)
188 1sui_A Caffeoyl-COA O-methyltr 99.5 4.2E-14 1.4E-18 126.8 12.3 103 159-264 80-191 (247)
189 2pbf_A Protein-L-isoaspartate 99.5 5.2E-14 1.8E-18 124.4 12.7 101 158-264 80-194 (227)
190 3b3j_A Histone-arginine methyl 99.5 2.6E-14 8.8E-19 139.9 11.3 115 141-262 146-262 (480)
191 4hc4_A Protein arginine N-meth 99.5 7.2E-14 2.5E-18 131.9 13.6 101 159-261 84-187 (376)
192 1p91_A Ribosomal RNA large sub 99.5 8.9E-14 3E-18 126.1 13.8 95 159-266 86-181 (269)
193 1r18_A Protein-L-isoaspartate( 99.5 4.8E-14 1.6E-18 124.7 10.9 100 158-264 84-195 (227)
194 1ej0_A FTSJ; methyltransferase 99.5 4.3E-14 1.5E-18 119.3 10.1 96 158-265 22-138 (180)
195 2pjd_A Ribosomal RNA small sub 99.5 3.8E-14 1.3E-18 133.4 10.6 102 159-264 197-304 (343)
196 2igt_A SAM dependent methyltra 99.5 4.8E-14 1.6E-18 131.7 10.3 106 159-265 154-274 (332)
197 3tm4_A TRNA (guanine N2-)-meth 99.5 2.8E-13 9.7E-18 128.8 15.2 125 159-318 218-351 (373)
198 2qm3_A Predicted methyltransfe 99.5 5.4E-13 1.8E-17 126.9 16.7 103 158-263 172-277 (373)
199 2bm8_A Cephalosporin hydroxyla 99.5 6.9E-14 2.4E-18 124.5 9.8 97 159-264 82-188 (236)
200 2hnk_A SAM-dependent O-methylt 99.5 1.4E-13 4.8E-18 122.7 11.6 104 159-265 61-183 (239)
201 3a27_A TYW2, uncharacterized p 99.5 1.2E-13 4.1E-18 125.7 11.3 102 158-265 119-221 (272)
202 3cbg_A O-methyltransferase; cy 99.5 1.6E-13 5.3E-18 122.0 11.6 104 159-265 73-184 (232)
203 1nv8_A HEMK protein; class I a 99.5 2.2E-13 7.4E-18 124.7 12.3 101 159-262 124-248 (284)
204 3c3y_A Pfomt, O-methyltransfer 99.5 1.9E-13 6.5E-18 121.8 11.2 103 159-264 71-182 (237)
205 3k6r_A Putative transferase PH 99.5 4.4E-13 1.5E-17 121.4 13.5 128 158-314 125-252 (278)
206 2avd_A Catechol-O-methyltransf 99.5 2.4E-13 8.2E-18 120.2 10.9 104 159-265 70-181 (229)
207 3sso_A Methyltransferase; macr 99.5 4.3E-14 1.5E-18 132.8 6.2 96 159-265 217-326 (419)
208 1zq9_A Probable dimethyladenos 99.5 6.6E-14 2.3E-18 128.2 7.2 112 141-260 16-144 (285)
209 2plw_A Ribosomal RNA methyltra 99.5 3.1E-13 1.1E-17 116.9 11.1 95 158-264 22-155 (201)
210 2yxl_A PH0851 protein, 450AA l 99.5 1.2E-12 4.1E-17 127.5 16.4 107 158-265 259-391 (450)
211 1wy7_A Hypothetical protein PH 99.5 2.2E-12 7.5E-17 112.1 16.3 127 158-321 49-177 (207)
212 3ajd_A Putative methyltransfer 99.4 2.4E-13 8.4E-18 123.8 10.3 106 159-265 84-213 (274)
213 3adn_A Spermidine synthase; am 99.4 3.4E-13 1.2E-17 123.7 9.6 105 159-263 84-198 (294)
214 1ne2_A Hypothetical protein TA 99.4 4.6E-12 1.6E-16 109.5 14.1 86 159-253 52-139 (200)
215 3gjy_A Spermidine synthase; AP 99.4 8.5E-13 2.9E-17 121.4 9.8 105 159-264 90-201 (317)
216 1xj5_A Spermidine synthase 1; 99.4 1.5E-12 5.1E-17 121.5 11.3 105 159-263 121-235 (334)
217 3dou_A Ribosomal RNA large sub 99.4 1.6E-12 5.6E-17 111.7 10.0 107 141-264 12-140 (191)
218 2o07_A Spermidine synthase; st 99.4 6.2E-13 2.1E-17 122.7 7.5 105 159-263 96-209 (304)
219 1uir_A Polyamine aminopropyltr 99.4 9.1E-13 3.1E-17 122.3 8.5 105 159-263 78-195 (314)
220 2nyu_A Putative ribosomal RNA 99.4 3.7E-12 1.3E-16 109.6 11.7 96 158-265 22-147 (196)
221 3m6w_A RRNA methylase; rRNA me 99.4 2.1E-12 7.3E-17 125.0 11.2 105 158-264 101-230 (464)
222 2wa2_A Non-structural protein 99.4 2.2E-13 7.6E-18 123.8 3.8 102 158-265 82-195 (276)
223 2b2c_A Spermidine synthase; be 99.4 5.3E-13 1.8E-17 123.6 6.2 104 159-263 109-222 (314)
224 1inl_A Spermidine synthase; be 99.4 1.1E-12 3.9E-17 120.6 8.4 105 159-263 91-205 (296)
225 1iy9_A Spermidine synthase; ro 99.3 2.4E-12 8E-17 117.2 9.8 105 159-263 76-189 (275)
226 2b78_A Hypothetical protein SM 99.3 8.1E-13 2.8E-17 126.1 7.0 106 159-264 213-332 (385)
227 2oxt_A Nucleoside-2'-O-methylt 99.3 2.7E-13 9.4E-18 122.5 3.4 102 158-265 74-187 (265)
228 3c0k_A UPF0064 protein YCCW; P 99.3 1.6E-12 5.6E-17 124.6 9.0 106 159-264 221-340 (396)
229 3m4x_A NOL1/NOP2/SUN family pr 99.3 2.9E-12 9.8E-17 124.0 10.6 106 158-264 105-235 (456)
230 2pt6_A Spermidine synthase; tr 99.3 9.2E-13 3.1E-17 122.5 6.7 104 159-263 117-230 (321)
231 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3.4E-11 1.2E-15 116.6 18.0 117 136-263 269-389 (433)
232 2frx_A Hypothetical protein YE 99.3 5.3E-12 1.8E-16 123.3 12.2 107 158-265 117-248 (479)
233 2yx1_A Hypothetical protein MJ 99.3 4.4E-12 1.5E-16 118.8 10.6 99 159-266 196-294 (336)
234 1sqg_A SUN protein, FMU protei 99.3 7.8E-12 2.7E-16 121.1 12.3 106 158-265 246-376 (429)
235 3v97_A Ribosomal RNA large sub 99.3 2.2E-12 7.5E-17 131.8 8.5 105 159-263 540-657 (703)
236 2as0_A Hypothetical protein PH 99.3 2.5E-12 8.5E-17 123.3 8.4 107 159-265 218-337 (396)
237 3frh_A 16S rRNA methylase; met 99.3 6E-12 2E-16 110.0 9.8 101 158-263 105-206 (253)
238 2i7c_A Spermidine synthase; tr 99.3 4.9E-12 1.7E-16 115.6 9.4 105 159-263 79-192 (283)
239 3lcv_B Sisomicin-gentamicin re 99.3 2.4E-12 8.2E-17 113.5 6.8 102 159-264 133-237 (281)
240 4dmg_A Putative uncharacterize 99.3 4.5E-12 1.5E-16 120.9 9.3 104 159-265 215-328 (393)
241 2f8l_A Hypothetical protein LM 99.3 2.3E-11 8E-16 114.3 14.1 103 159-264 131-257 (344)
242 1mjf_A Spermidine synthase; sp 99.3 2.2E-12 7.6E-17 117.8 6.8 103 159-263 76-193 (281)
243 1wxx_A TT1595, hypothetical pr 99.3 1.7E-12 5.9E-17 123.8 5.2 104 159-264 210-326 (382)
244 3b5i_A S-adenosyl-L-methionine 99.3 3.1E-10 1.1E-14 106.8 20.5 187 137-323 31-302 (374)
245 2cmg_A Spermidine synthase; tr 99.3 2.1E-12 7.3E-17 116.5 5.3 96 159-263 73-171 (262)
246 2xyq_A Putative 2'-O-methyl tr 99.3 1.9E-11 6.5E-16 111.4 11.0 113 158-317 63-195 (290)
247 2h1r_A Dimethyladenosine trans 99.3 1.9E-11 6.6E-16 112.5 10.7 87 141-236 30-116 (299)
248 1qam_A ERMC' methyltransferase 99.2 3.9E-12 1.3E-16 113.7 4.7 83 141-233 18-101 (244)
249 2jjq_A Uncharacterized RNA met 99.2 6E-10 2.1E-14 107.3 18.9 97 159-263 291-387 (425)
250 3gru_A Dimethyladenosine trans 99.2 1.7E-10 5.9E-15 105.4 13.6 88 140-236 37-124 (295)
251 2p41_A Type II methyltransfera 99.2 1.1E-11 3.8E-16 114.2 5.7 100 158-264 82-192 (305)
252 1yub_A Ermam, rRNA methyltrans 99.2 1.4E-13 4.8E-18 123.3 -7.8 113 141-263 17-145 (245)
253 3ldg_A Putative uncharacterize 99.2 3.6E-10 1.2E-14 107.3 14.1 117 141-263 182-343 (384)
254 3k0b_A Predicted N6-adenine-sp 99.2 3.5E-10 1.2E-14 107.8 13.9 117 141-263 189-350 (393)
255 3ldu_A Putative methylase; str 99.1 3E-10 1E-14 108.1 12.9 117 141-263 183-344 (385)
256 2okc_A Type I restriction enzy 99.1 3.5E-10 1.2E-14 110.0 12.2 104 159-263 172-307 (445)
257 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.8E-10 9.7E-15 107.9 11.0 113 137-263 198-326 (369)
258 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.4E-09 4.9E-14 100.2 14.3 105 158-264 102-235 (309)
259 3tqs_A Ribosomal RNA small sub 99.1 4.4E-10 1.5E-14 100.7 9.9 83 141-233 17-103 (255)
260 3axs_A Probable N(2),N(2)-dime 99.0 3.5E-10 1.2E-14 107.2 8.7 101 159-263 53-158 (392)
261 2dul_A N(2),N(2)-dimethylguano 99.0 7.7E-10 2.6E-14 104.8 11.0 100 159-263 48-164 (378)
262 2efj_A 3,7-dimethylxanthine me 99.0 5.3E-09 1.8E-13 98.5 15.1 160 159-321 53-294 (384)
263 2ih2_A Modification methylase 99.0 9.6E-10 3.3E-14 106.0 10.2 108 141-264 27-165 (421)
264 3fut_A Dimethyladenosine trans 99.0 7.1E-10 2.4E-14 100.1 8.6 85 141-236 35-120 (271)
265 2qfm_A Spermine synthase; sper 99.0 5.6E-10 1.9E-14 103.8 7.5 106 158-263 188-314 (364)
266 1m6y_A S-adenosyl-methyltransf 99.0 7.5E-10 2.6E-14 101.5 7.6 87 141-234 14-106 (301)
267 2r6z_A UPF0341 protein in RSP 98.9 2.1E-10 7.3E-15 103.1 2.0 79 159-238 84-173 (258)
268 3cvo_A Methyltransferase-like 98.9 4.5E-08 1.5E-12 83.9 16.0 98 159-263 31-154 (202)
269 3v97_A Ribosomal RNA large sub 98.9 1.1E-08 3.7E-13 104.6 13.2 118 141-263 178-347 (703)
270 3uzu_A Ribosomal RNA small sub 98.9 5.9E-09 2E-13 94.6 9.3 72 141-223 30-105 (279)
271 3ftd_A Dimethyladenosine trans 98.9 1.7E-08 5.9E-13 90.1 11.7 100 140-251 18-117 (249)
272 4gqb_A Protein arginine N-meth 98.8 2.8E-08 9.6E-13 99.2 14.0 100 159-260 358-464 (637)
273 1m6e_X S-adenosyl-L-methionnin 98.8 1.1E-08 3.8E-13 95.5 10.1 162 158-319 51-280 (359)
274 3ll7_A Putative methyltransfer 98.8 2.9E-09 9.7E-14 101.3 6.1 73 159-233 94-170 (410)
275 2ar0_A M.ecoki, type I restric 98.8 1E-08 3.4E-13 101.8 10.0 105 159-263 170-312 (541)
276 3ua3_A Protein arginine N-meth 98.8 1.4E-08 4.9E-13 101.1 10.1 100 159-260 410-531 (745)
277 2oyr_A UPF0341 protein YHIQ; a 98.8 4.3E-09 1.5E-13 94.2 5.7 96 160-257 90-194 (258)
278 2qy6_A UPF0209 protein YFCK; s 98.8 9.6E-09 3.3E-13 92.0 7.0 127 159-319 61-235 (257)
279 3o4f_A Spermidine synthase; am 98.7 8.5E-08 2.9E-12 86.8 11.3 105 159-263 84-198 (294)
280 1qyr_A KSGA, high level kasuga 98.7 9.8E-09 3.4E-13 91.8 4.9 87 141-239 9-102 (252)
281 3khk_A Type I restriction-modi 98.7 7.4E-08 2.5E-12 95.4 10.7 104 160-263 246-395 (544)
282 3evf_A RNA-directed RNA polyme 98.6 1.2E-07 4.1E-12 84.2 9.2 116 141-265 62-186 (277)
283 3lkd_A Type I restriction-modi 98.6 4.5E-07 1.5E-11 89.7 14.3 106 158-263 221-358 (542)
284 2wk1_A NOVP; transferase, O-me 98.4 8.4E-07 2.9E-11 80.1 9.5 104 159-264 107-245 (282)
285 1wg8_A Predicted S-adenosylmet 98.4 8.6E-07 3E-11 79.2 8.3 85 141-236 10-99 (285)
286 3gcz_A Polyprotein; flavivirus 98.3 2.8E-07 9.4E-12 82.0 4.4 116 141-265 78-203 (282)
287 3s1s_A Restriction endonucleas 98.3 1E-06 3.6E-11 89.2 8.8 106 158-264 321-466 (878)
288 4fzv_A Putative methyltransfer 98.3 1.7E-06 5.7E-11 81.0 9.3 108 158-265 148-286 (359)
289 2k4m_A TR8_protein, UPF0146 pr 98.3 1.2E-06 4.1E-11 70.0 6.7 88 159-267 36-125 (153)
290 4auk_A Ribosomal RNA large sub 98.2 3E-06 1E-10 78.8 8.3 86 158-256 211-296 (375)
291 3eld_A Methyltransferase; flav 98.1 4.5E-06 1.5E-10 74.7 7.1 116 141-265 69-193 (300)
292 3lkz_A Non-structural protein 98.1 1.1E-05 3.6E-10 71.9 9.3 115 141-265 82-206 (321)
293 3c6k_A Spermine synthase; sper 98.1 4.9E-06 1.7E-10 77.7 7.0 106 158-263 205-331 (381)
294 1rjd_A PPM1P, carboxy methyl t 98.1 7.6E-05 2.6E-09 69.2 14.8 150 159-312 98-281 (334)
295 2vz8_A Fatty acid synthase; tr 98.0 6.8E-07 2.3E-11 102.7 -0.1 146 158-316 1240-1392(2512)
296 3ufb_A Type I restriction-modi 97.9 0.00017 5.7E-09 71.2 14.9 105 159-264 218-363 (530)
297 2zig_A TTHA0409, putative modi 97.9 4.6E-05 1.6E-09 69.7 10.0 58 140-204 223-280 (297)
298 3p8z_A Mtase, non-structural p 97.9 0.00014 4.9E-09 62.6 11.9 115 140-265 65-188 (267)
299 2px2_A Genome polyprotein [con 97.8 3.6E-05 1.2E-09 67.4 7.0 98 158-265 73-185 (269)
300 2uyo_A Hypothetical protein ML 97.5 0.001 3.5E-08 60.9 13.1 150 159-314 103-274 (310)
301 3tka_A Ribosomal RNA small sub 97.5 0.00011 3.9E-09 67.1 6.1 87 141-237 45-139 (347)
302 1g60_A Adenine-specific methyl 97.3 0.00053 1.8E-08 61.2 8.4 59 140-205 200-258 (260)
303 3r24_A NSP16, 2'-O-methyl tran 97.3 0.0017 5.7E-08 57.9 10.3 111 139-265 90-219 (344)
304 3vyw_A MNMC2; tRNA wobble urid 97.3 0.0009 3.1E-08 60.7 8.8 126 159-319 97-248 (308)
305 1i4w_A Mitochondrial replicati 97.2 0.0011 3.7E-08 61.7 8.9 77 140-220 39-117 (353)
306 3iei_A Leucine carboxyl methyl 96.8 0.073 2.5E-06 49.0 17.7 154 159-319 91-281 (334)
307 2dph_A Formaldehyde dismutase; 96.7 0.0078 2.7E-07 57.0 10.7 97 158-264 185-300 (398)
308 1kol_A Formaldehyde dehydrogen 96.7 0.01 3.6E-07 56.1 11.1 99 158-264 185-301 (398)
309 1f8f_A Benzyl alcohol dehydrog 96.4 0.016 5.6E-07 54.2 10.6 95 158-265 190-291 (371)
310 3two_A Mannitol dehydrogenase; 96.4 0.016 5.5E-07 53.7 10.0 90 158-264 176-266 (348)
311 1pqw_A Polyketide synthase; ro 96.1 0.022 7.4E-07 48.1 8.9 91 158-264 38-138 (198)
312 2oo3_A Protein involved in cat 96.1 0.0029 9.9E-08 56.5 3.1 101 159-263 92-198 (283)
313 1pl8_A Human sorbitol dehydrog 96.0 0.012 4.1E-07 54.8 6.9 94 158-264 171-274 (356)
314 3s2e_A Zinc-containing alcohol 95.9 0.029 1E-06 51.7 9.3 92 158-264 166-264 (340)
315 1e3j_A NADP(H)-dependent ketos 95.9 0.08 2.7E-06 49.0 12.3 94 158-264 168-272 (352)
316 3tos_A CALS11; methyltransfera 95.9 0.15 5.1E-06 44.9 13.1 105 159-265 70-219 (257)
317 1uuf_A YAHK, zinc-type alcohol 95.8 0.011 3.8E-07 55.4 6.2 93 158-264 194-289 (369)
318 4ej6_A Putative zinc-binding d 95.8 0.015 5E-07 54.6 7.0 92 159-265 183-286 (370)
319 3fwz_A Inner membrane protein 95.8 0.16 5.5E-06 40.1 12.2 90 159-263 7-105 (140)
320 3m6i_A L-arabinitol 4-dehydrog 95.8 0.073 2.5E-06 49.5 11.6 97 158-265 179-285 (363)
321 3fpc_A NADP-dependent alcohol 95.7 0.04 1.4E-06 51.1 9.3 93 158-265 166-268 (352)
322 3uog_A Alcohol dehydrogenase; 95.6 0.06 2E-06 50.2 10.2 94 158-265 189-289 (363)
323 1v3u_A Leukotriene B4 12- hydr 95.5 0.064 2.2E-06 49.2 9.9 91 158-264 145-245 (333)
324 3pvc_A TRNA 5-methylaminomethy 95.5 0.03 1E-06 57.1 8.1 125 159-317 59-231 (689)
325 3ps9_A TRNA 5-methylaminomethy 95.3 0.058 2E-06 54.7 9.7 124 159-317 67-239 (676)
326 3g7u_A Cytosine-specific methy 95.3 0.04 1.4E-06 51.7 7.8 68 160-234 3-79 (376)
327 3goh_A Alcohol dehydrogenase, 95.3 0.028 9.5E-07 51.3 6.5 88 157-263 141-229 (315)
328 4b7c_A Probable oxidoreductase 95.2 0.082 2.8E-06 48.5 9.6 93 158-265 149-250 (336)
329 3gms_A Putative NADPH:quinone 95.2 0.072 2.5E-06 49.1 9.0 92 158-265 144-245 (340)
330 1g55_A DNA cytosine methyltran 95.2 0.016 5.5E-07 53.7 4.5 71 159-235 2-77 (343)
331 1rjw_A ADH-HT, alcohol dehydro 95.1 0.099 3.4E-06 48.1 9.9 92 158-264 164-262 (339)
332 2py6_A Methyltransferase FKBM; 95.0 0.072 2.5E-06 50.6 8.7 61 157-217 225-291 (409)
333 2h6e_A ADH-4, D-arabinose 1-de 95.0 0.019 6.3E-07 53.2 4.5 92 159-264 171-270 (344)
334 3ip1_A Alcohol dehydrogenase, 95.0 0.21 7.2E-06 47.2 11.9 95 157-265 212-320 (404)
335 1cdo_A Alcohol dehydrogenase; 94.9 0.13 4.4E-06 48.0 10.0 92 158-264 192-295 (374)
336 1boo_A Protein (N-4 cytosine-s 94.9 0.039 1.3E-06 50.6 6.3 58 141-205 241-298 (323)
337 1p0f_A NADP-dependent alcohol 94.8 0.033 1.1E-06 52.1 5.8 92 158-264 191-294 (373)
338 1jvb_A NAD(H)-dependent alcoho 94.8 0.12 4.2E-06 47.7 9.4 92 158-264 170-272 (347)
339 1eg2_A Modification methylase 94.8 0.061 2.1E-06 49.2 7.2 59 140-205 230-291 (319)
340 2hcy_A Alcohol dehydrogenase 1 94.8 0.068 2.3E-06 49.4 7.6 92 158-264 169-270 (347)
341 2j3h_A NADP-dependent oxidored 94.7 0.14 4.7E-06 47.2 9.7 92 158-264 155-256 (345)
342 2eih_A Alcohol dehydrogenase; 94.7 0.2 6.7E-06 46.2 10.7 92 158-265 166-267 (343)
343 3jyn_A Quinone oxidoreductase; 94.7 0.19 6.6E-06 45.8 10.6 94 158-265 140-241 (325)
344 3qwb_A Probable quinone oxidor 94.7 0.099 3.4E-06 48.0 8.6 94 158-265 148-249 (334)
345 2jhf_A Alcohol dehydrogenase E 94.7 0.041 1.4E-06 51.5 6.0 92 158-264 191-294 (374)
346 2fzw_A Alcohol dehydrogenase c 94.7 0.16 5.5E-06 47.3 10.2 92 158-264 190-293 (373)
347 1piw_A Hypothetical zinc-type 94.6 0.018 6.2E-07 53.6 3.3 95 158-264 179-277 (360)
348 2zig_A TTHA0409, putative modi 94.5 0.096 3.3E-06 47.3 7.9 97 208-321 20-138 (297)
349 2d8a_A PH0655, probable L-thre 94.5 0.13 4.5E-06 47.5 9.0 92 158-264 167-268 (348)
350 3uko_A Alcohol dehydrogenase c 94.5 0.033 1.1E-06 52.2 4.9 93 158-265 193-297 (378)
351 1e3i_A Alcohol dehydrogenase, 94.5 0.04 1.4E-06 51.6 5.5 92 158-264 195-298 (376)
352 4eye_A Probable oxidoreductase 94.5 0.11 3.6E-06 48.0 8.2 92 158-264 159-258 (342)
353 2c0c_A Zinc binding alcohol de 94.5 0.061 2.1E-06 50.1 6.6 93 158-264 163-262 (362)
354 2b5w_A Glucose dehydrogenase; 94.4 0.093 3.2E-06 48.7 7.7 89 160-264 174-274 (357)
355 3jv7_A ADH-A; dehydrogenase, n 94.4 0.098 3.4E-06 48.2 7.8 94 158-265 171-272 (345)
356 2zwa_A Leucine carboxyl methyl 94.4 0.92 3.2E-05 46.0 15.7 174 137-320 91-310 (695)
357 4dvj_A Putative zinc-dependent 94.3 0.22 7.6E-06 46.3 10.0 91 158-263 171-270 (363)
358 1zkd_A DUF185; NESG, RPR58, st 94.2 0.35 1.2E-05 45.3 11.0 44 159-202 81-132 (387)
359 2c7p_A Modification methylase 94.1 0.12 4.1E-06 47.4 7.6 67 159-233 11-78 (327)
360 3llv_A Exopolyphosphatase-rela 94.0 0.53 1.8E-05 36.9 10.5 87 159-261 6-101 (141)
361 3nx4_A Putative oxidoreductase 94.0 0.071 2.4E-06 48.7 5.9 91 161-264 149-242 (324)
362 1yb5_A Quinone oxidoreductase; 94.0 0.2 6.9E-06 46.3 9.1 90 158-263 170-269 (351)
363 1qor_A Quinone oxidoreductase; 93.9 0.19 6.6E-06 45.8 8.8 91 158-264 140-240 (327)
364 1vj0_A Alcohol dehydrogenase, 93.8 0.17 6E-06 47.3 8.4 95 158-265 195-300 (380)
365 2zb4_A Prostaglandin reductase 93.8 0.31 1.1E-05 45.0 10.0 91 159-264 159-261 (357)
366 4dup_A Quinone oxidoreductase; 93.7 0.22 7.6E-06 46.0 8.8 92 158-265 167-267 (353)
367 2cdc_A Glucose dehydrogenase g 93.7 0.23 7.9E-06 46.1 9.0 88 159-264 181-279 (366)
368 2j8z_A Quinone oxidoreductase; 93.6 0.27 9.4E-06 45.4 9.3 91 158-264 162-262 (354)
369 2dq4_A L-threonine 3-dehydroge 93.6 0.01 3.6E-07 54.9 -0.6 91 158-264 164-263 (343)
370 2cf5_A Atccad5, CAD, cinnamyl 93.5 0.11 3.8E-06 48.2 6.4 95 158-264 180-276 (357)
371 1yqd_A Sinapyl alcohol dehydro 93.2 0.16 5.4E-06 47.3 6.8 92 158-264 187-283 (366)
372 3krt_A Crotonyl COA reductase; 93.2 0.52 1.8E-05 45.2 10.7 92 157-264 227-345 (456)
373 3fbg_A Putative arginate lyase 93.2 0.42 1.4E-05 43.9 9.7 91 158-263 150-248 (346)
374 1xa0_A Putative NADPH dependen 93.1 0.12 4.2E-06 47.2 5.9 93 159-264 149-247 (328)
375 1wly_A CAAR, 2-haloacrylate re 93.1 0.35 1.2E-05 44.2 9.0 92 158-265 145-246 (333)
376 4eez_A Alcohol dehydrogenase 1 93.0 0.27 9.3E-06 45.2 8.2 97 158-264 163-264 (348)
377 1iz0_A Quinone oxidoreductase; 92.9 0.049 1.7E-06 49.3 2.8 90 158-264 125-219 (302)
378 1lss_A TRK system potassium up 92.7 1.2 4.1E-05 34.3 10.5 90 159-261 4-100 (140)
379 3tqh_A Quinone oxidoreductase; 92.6 0.74 2.5E-05 41.7 10.4 91 158-263 152-245 (321)
380 4a2c_A Galactitol-1-phosphate 92.5 0.62 2.1E-05 42.7 9.9 93 158-265 160-262 (346)
381 3gaz_A Alcohol dehydrogenase s 92.5 0.32 1.1E-05 44.8 7.8 89 158-263 150-246 (343)
382 1boo_A Protein (N-4 cytosine-s 92.4 0.4 1.4E-05 43.8 8.3 56 208-263 13-84 (323)
383 3qv2_A 5-cytosine DNA methyltr 92.3 0.22 7.7E-06 45.6 6.4 98 159-263 10-129 (327)
384 3ioy_A Short-chain dehydrogena 92.2 1.2 4E-05 40.5 11.2 79 159-238 8-99 (319)
385 1tt7_A YHFP; alcohol dehydroge 92.0 0.12 4.2E-06 47.2 4.3 94 159-265 150-249 (330)
386 3ius_A Uncharacterized conserv 91.9 2.2 7.6E-05 37.5 12.5 71 159-241 5-78 (286)
387 1xg5_A ARPG836; short chain de 91.8 3 0.0001 36.6 13.3 78 159-237 32-122 (279)
388 4f3n_A Uncharacterized ACR, CO 91.7 0.72 2.5E-05 43.7 9.3 45 159-203 138-188 (432)
389 4h0n_A DNMT2; SAH binding, tra 91.6 0.23 7.8E-06 45.6 5.7 69 159-233 3-76 (333)
390 4a0s_A Octenoyl-COA reductase/ 91.6 0.72 2.4E-05 44.0 9.4 97 157-264 219-337 (447)
391 1pjc_A Protein (L-alanine dehy 91.4 0.16 5.6E-06 47.2 4.5 102 158-264 166-268 (361)
392 4dcm_A Ribosomal RNA large sub 91.2 1.1 3.6E-05 41.9 9.9 97 159-263 39-136 (375)
393 2vn8_A Reticulon-4-interacting 91.1 0.16 5.6E-06 47.4 4.2 92 157-263 182-280 (375)
394 2vhw_A Alanine dehydrogenase; 90.8 0.16 5.6E-06 47.5 3.9 101 158-263 167-268 (377)
395 3l9w_A Glutathione-regulated p 90.8 2.3 7.7E-05 40.2 11.8 90 159-263 4-102 (413)
396 3gqv_A Enoyl reductase; medium 90.7 0.24 8.4E-06 46.1 5.0 94 157-264 163-264 (371)
397 2qrv_A DNA (cytosine-5)-methyl 90.6 0.54 1.9E-05 42.3 7.0 69 158-233 15-90 (295)
398 3is3_A 17BETA-hydroxysteroid d 90.5 3.1 0.0001 36.5 11.9 103 159-264 18-153 (270)
399 2gdz_A NAD+-dependent 15-hydro 90.5 1.9 6.5E-05 37.7 10.5 104 159-263 7-139 (267)
400 3pxx_A Carveol dehydrogenase; 90.4 2.1 7.2E-05 37.7 10.8 102 159-263 10-153 (287)
401 3c85_A Putative glutathione-re 90.4 1.2 4.1E-05 36.6 8.5 91 159-262 39-138 (183)
402 4eso_A Putative oxidoreductase 90.3 1.3 4.5E-05 38.6 9.2 99 159-263 8-138 (255)
403 4g81_D Putative hexonate dehyd 90.1 1.8 6E-05 38.0 9.7 78 159-239 9-99 (255)
404 3ek2_A Enoyl-(acyl-carrier-pro 89.9 1.6 5.6E-05 38.0 9.5 104 157-263 12-153 (271)
405 3grk_A Enoyl-(acyl-carrier-pro 89.9 2.6 9E-05 37.5 11.0 101 159-263 31-169 (293)
406 3o26_A Salutaridine reductase; 89.8 3.4 0.00012 36.6 11.8 77 159-237 12-102 (311)
407 1zsy_A Mitochondrial 2-enoyl t 89.4 1.1 3.9E-05 41.2 8.5 92 158-263 167-270 (357)
408 3oig_A Enoyl-[acyl-carrier-pro 89.4 1.9 6.6E-05 37.6 9.6 103 159-263 7-147 (266)
409 2eez_A Alanine dehydrogenase; 89.3 0.26 8.7E-06 46.0 3.9 101 158-263 165-266 (369)
410 3ijr_A Oxidoreductase, short c 89.3 3 0.0001 37.0 11.0 102 159-263 47-182 (291)
411 3ce6_A Adenosylhomocysteinase; 89.0 1.5 5.1E-05 42.4 9.1 88 158-263 273-361 (494)
412 3v2g_A 3-oxoacyl-[acyl-carrier 88.9 5.1 0.00017 35.1 12.1 102 159-263 31-165 (271)
413 3t7c_A Carveol dehydrogenase; 88.9 4.5 0.00015 36.0 11.8 76 159-237 28-128 (299)
414 3r3s_A Oxidoreductase; structu 88.7 3.3 0.00011 36.9 10.8 102 159-263 49-185 (294)
415 3p2y_A Alanine dehydrogenase/p 88.5 0.24 8.3E-06 46.2 3.1 97 158-262 183-301 (381)
416 4dio_A NAD(P) transhydrogenase 87.9 0.79 2.7E-05 43.1 6.2 42 158-199 189-231 (405)
417 3ubt_Y Modification methylase 87.8 0.85 2.9E-05 41.5 6.3 66 160-233 1-68 (331)
418 3t4x_A Oxidoreductase, short c 87.6 5.1 0.00017 34.9 11.2 79 159-238 10-97 (267)
419 1wma_A Carbonyl reductase [NAD 87.5 2.7 9.4E-05 36.4 9.4 102 159-263 4-138 (276)
420 3e8x_A Putative NAD-dependent 87.3 3.8 0.00013 34.8 10.0 75 159-242 21-100 (236)
421 3tsc_A Putative oxidoreductase 87.2 4.8 0.00016 35.3 10.8 77 159-238 11-113 (277)
422 1gu7_A Enoyl-[acyl-carrier-pro 87.1 0.6 2E-05 43.2 4.9 97 158-264 166-276 (364)
423 1l7d_A Nicotinamide nucleotide 86.8 0.44 1.5E-05 44.7 3.8 42 158-199 171-213 (384)
424 4imr_A 3-oxoacyl-(acyl-carrier 86.8 3.3 0.00011 36.4 9.5 76 159-237 33-120 (275)
425 3k31_A Enoyl-(acyl-carrier-pro 86.6 2.1 7.2E-05 38.2 8.1 102 158-263 29-168 (296)
426 1g60_A Adenine-specific methyl 86.6 0.43 1.5E-05 42.0 3.4 21 243-263 54-74 (260)
427 4fgs_A Probable dehydrogenase 86.5 2.4 8.2E-05 37.6 8.2 99 159-263 29-159 (273)
428 4fn4_A Short chain dehydrogena 86.4 3.3 0.00011 36.2 9.1 76 158-236 6-94 (254)
429 3edm_A Short chain dehydrogena 85.8 1.7 6E-05 37.8 7.0 102 159-263 8-143 (259)
430 1ja9_A 4HNR, 1,3,6,8-tetrahydr 85.7 3.1 0.00011 36.2 8.7 76 159-237 21-110 (274)
431 1id1_A Putative potassium chan 85.6 5.2 0.00018 31.5 9.3 94 159-262 3-104 (153)
432 1x13_A NAD(P) transhydrogenase 85.6 0.43 1.5E-05 45.0 3.0 41 158-198 171-212 (401)
433 3f9i_A 3-oxoacyl-[acyl-carrier 85.4 8.4 0.00029 32.9 11.2 75 157-237 12-95 (249)
434 2hmt_A YUAA protein; RCK, KTN, 85.2 4.6 0.00016 31.0 8.7 90 159-261 6-102 (144)
435 3sx2_A Putative 3-ketoacyl-(ac 84.9 5.8 0.0002 34.7 10.1 79 158-239 12-115 (278)
436 3gvc_A Oxidoreductase, probabl 84.8 7.3 0.00025 34.2 10.7 74 159-238 29-115 (277)
437 3u5t_A 3-oxoacyl-[acyl-carrier 84.6 6 0.00021 34.6 10.0 102 159-263 27-161 (267)
438 3pi7_A NADH oxidoreductase; gr 84.3 2.8 9.6E-05 38.3 7.9 89 160-264 166-264 (349)
439 2g1u_A Hypothetical protein TM 84.0 2.1 7.2E-05 34.0 6.2 93 158-262 18-117 (155)
440 3l4b_C TRKA K+ channel protien 83.8 2.6 9E-05 35.6 7.0 87 161-261 2-97 (218)
441 1gee_A Glucose 1-dehydrogenase 83.7 6.5 0.00022 33.9 9.8 76 159-237 7-96 (261)
442 1g0o_A Trihydroxynaphthalene r 83.7 5.4 0.00019 35.1 9.4 102 159-263 29-163 (283)
443 3gvp_A Adenosylhomocysteinase 83.7 4.6 0.00016 38.1 9.1 88 158-263 219-307 (435)
444 4e6p_A Probable sorbitol dehyd 83.4 10 0.00036 32.7 11.0 73 159-237 8-93 (259)
445 3d4o_A Dipicolinate synthase s 82.7 13 0.00046 32.9 11.6 89 158-263 154-244 (293)
446 4hp8_A 2-deoxy-D-gluconate 3-d 82.5 13 0.00045 32.2 11.0 77 158-239 8-92 (247)
447 2x9g_A PTR1, pteridine reducta 81.7 13 0.00044 32.6 11.1 75 159-236 23-116 (288)
448 2km1_A Protein DRE2; yeast, an 81.4 1.3 4.6E-05 34.6 3.7 71 190-261 21-96 (136)
449 3me5_A Cytosine-specific methy 81.3 1.4 4.7E-05 42.5 4.6 60 158-220 87-146 (482)
450 3ucx_A Short chain dehydrogena 81.0 8.3 0.00028 33.5 9.4 75 159-236 11-98 (264)
451 3ggo_A Prephenate dehydrogenas 80.9 7.1 0.00024 35.2 9.1 89 159-260 33-125 (314)
452 3ksu_A 3-oxoacyl-acyl carrier 80.1 5.8 0.0002 34.5 8.1 102 159-263 11-147 (262)
453 3gaf_A 7-alpha-hydroxysteroid 80.0 8.1 0.00028 33.4 9.0 76 159-237 12-100 (256)
454 1xhl_A Short-chain dehydrogena 79.9 13 0.00044 33.0 10.5 78 159-237 26-117 (297)
455 3qiv_A Short-chain dehydrogena 79.9 7.4 0.00025 33.4 8.7 75 159-236 9-96 (253)
456 1yb1_A 17-beta-hydroxysteroid 79.9 9.1 0.00031 33.3 9.4 77 159-238 31-120 (272)
457 3tjr_A Short chain dehydrogena 79.7 8 0.00027 34.4 9.0 77 159-238 31-120 (301)
458 1qsg_A Enoyl-[acyl-carrier-pro 79.4 11 0.00037 32.6 9.7 76 159-237 9-98 (265)
459 1y1p_A ARII, aldehyde reductas 79.3 26 0.00089 31.1 12.5 79 158-238 10-95 (342)
460 3n58_A Adenosylhomocysteinase; 79.2 7.6 0.00026 36.9 8.8 105 137-263 229-334 (464)
461 3lyl_A 3-oxoacyl-(acyl-carrier 79.0 9.4 0.00032 32.6 9.0 76 159-237 5-93 (247)
462 1spx_A Short-chain reductase f 79.0 3.8 0.00013 35.9 6.5 78 159-237 6-97 (278)
463 3h7a_A Short chain dehydrogena 78.7 4.7 0.00016 34.9 7.0 77 159-238 7-95 (252)
464 3awd_A GOX2181, putative polyo 78.7 11 0.00036 32.4 9.4 76 159-237 13-101 (260)
465 3rku_A Oxidoreductase YMR226C; 78.6 9.9 0.00034 33.6 9.2 78 159-237 33-126 (287)
466 3rkr_A Short chain oxidoreduct 78.5 7.7 0.00026 33.6 8.4 75 159-236 29-116 (262)
467 2rir_A Dipicolinate synthase, 78.5 9.6 0.00033 33.9 9.2 89 158-263 156-246 (300)
468 2vz8_A Fatty acid synthase; tr 78.5 2.1 7.2E-05 49.9 5.7 97 158-263 1667-1770(2512)
469 2a4k_A 3-oxoacyl-[acyl carrier 78.3 11 0.00036 32.8 9.2 99 159-263 6-136 (263)
470 3o38_A Short chain dehydrogena 78.2 9.5 0.00032 33.0 8.9 79 158-238 21-113 (266)
471 3nyw_A Putative oxidoreductase 78.1 11 0.00038 32.4 9.2 78 159-237 7-98 (250)
472 1fmc_A 7 alpha-hydroxysteroid 78.0 9.8 0.00034 32.5 8.9 76 159-237 11-99 (255)
473 3tfo_A Putative 3-oxoacyl-(acy 77.7 8.3 0.00028 33.7 8.3 77 159-238 4-93 (264)
474 3l77_A Short-chain alcohol deh 77.4 22 0.00077 29.8 10.9 78 159-239 2-93 (235)
475 1zcj_A Peroxisomal bifunctiona 77.2 14 0.00047 35.3 10.3 96 159-261 37-148 (463)
476 3iht_A S-adenosyl-L-methionine 77.1 8.8 0.0003 30.7 7.2 114 135-263 23-147 (174)
477 3sju_A Keto reductase; short-c 76.9 9.3 0.00032 33.5 8.5 77 159-238 24-113 (279)
478 3h2s_A Putative NADH-flavin re 76.8 12 0.00041 31.1 8.9 94 161-263 2-104 (224)
479 3lf2_A Short chain oxidoreduct 76.8 12 0.0004 32.5 9.0 78 159-237 8-98 (265)
480 3ond_A Adenosylhomocysteinase; 76.6 18 0.00062 34.7 10.8 101 139-263 249-352 (488)
481 2h7i_A Enoyl-[acyl-carrier-pro 76.2 2.6 9E-05 36.8 4.6 100 159-263 7-148 (269)
482 3ew7_A LMO0794 protein; Q8Y8U8 75.8 24 0.00081 29.0 10.5 93 161-263 2-102 (221)
483 3nzo_A UDP-N-acetylglucosamine 75.7 8.5 0.00029 35.9 8.2 80 159-239 35-125 (399)
484 2pd4_A Enoyl-[acyl-carrier-pro 75.4 7.7 0.00026 33.9 7.5 76 159-237 6-95 (275)
485 1h2b_A Alcohol dehydrogenase; 75.1 6.9 0.00024 35.8 7.4 90 158-264 186-286 (359)
486 2p91_A Enoyl-[acyl-carrier-pro 75.0 21 0.00073 31.1 10.4 76 159-237 21-110 (285)
487 4g65_A TRK system potassium up 74.9 3.8 0.00013 39.2 5.7 65 159-232 3-74 (461)
488 3imf_A Short chain dehydrogena 74.9 7.6 0.00026 33.5 7.3 76 159-237 6-94 (257)
489 4a27_A Synaptic vesicle membra 74.8 3.3 0.00011 37.9 5.0 90 158-264 142-239 (349)
490 3h9u_A Adenosylhomocysteinase; 74.4 19 0.00066 33.9 10.2 87 158-262 210-297 (436)
491 1iy8_A Levodione reductase; ox 74.3 15 0.00051 31.8 9.1 78 159-237 13-103 (267)
492 2jah_A Clavulanic acid dehydro 74.2 16 0.00053 31.3 9.1 76 159-237 7-95 (247)
493 3v8b_A Putative dehydrogenase, 73.9 11 0.00039 33.1 8.2 75 159-236 28-115 (283)
494 1xu9_A Corticosteroid 11-beta- 73.8 13 0.00043 32.6 8.6 73 159-233 28-113 (286)
495 3hwr_A 2-dehydropantoate 2-red 73.5 9.9 0.00034 34.2 7.9 92 159-263 19-120 (318)
496 2ew2_A 2-dehydropantoate 2-red 73.3 16 0.00056 32.2 9.3 91 160-262 4-107 (316)
497 3swr_A DNA (cytosine-5)-methyl 73.2 6.6 0.00023 41.4 7.3 54 157-217 538-593 (1002)
498 3uve_A Carveol dehydrogenase ( 73.1 15 0.0005 32.2 8.8 76 159-237 11-115 (286)
499 3pgx_A Carveol dehydrogenase; 73.0 15 0.00051 32.1 8.8 77 159-238 15-117 (280)
500 2rhc_B Actinorhodin polyketide 72.9 16 0.00055 31.8 9.0 76 159-237 22-110 (277)
No 1
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.96 E-value=5.2e-28 Score=221.06 Aligned_cols=223 Identities=30% Similarity=0.499 Sum_probs=167.2
Q ss_pred HHHHHHHccCchhHHHhhhccccccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHH
Q 016981 97 EGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYL 176 (379)
Q Consensus 97 ~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l 176 (379)
+.+..|||..++.|+.+++..++.+||...... .....++..+.+.+++.+++.+ +.+|||+|||+|.++..+
T Consensus 7 ~~~~~~Yd~~~~~y~~~~~~~~~~~y~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l 79 (273)
T 3bus_A 7 EEVRQMYDDFTDPFARIWGENLHFGYWEDAGAD--VSVDDATDRLTDEMIALLDVRS-----GDRVLDVGCGIGKPAVRL 79 (273)
T ss_dssp ----------------CCGGGCCCCCCCCSSCC--CCHHHHHHHHHHHHHHHSCCCT-----TCEEEEESCTTSHHHHHH
T ss_pred HHHHHHHcchHHHHHHHcCCCceEEecCCCccc--cCHHHHHHHHHHHHHHhcCCCC-----CCEEEEeCCCCCHHHHHH
Confidence 458889999999999999999999999776531 1267778888899999887655 889999999999999999
Q ss_pred HHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCC
Q 016981 177 AKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPA 256 (379)
Q Consensus 177 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg 256 (379)
++..+.+|+|+|+|+.+++.+++++...++++++.+..+|+.++++++++||+|++..+++|++++..+++++.++||||
T Consensus 80 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 159 (273)
T 3bus_A 80 ATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPG 159 (273)
T ss_dssp HHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE
T ss_pred HHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC
Confidence 98778899999999999999999999888877899999999999988899999999999999999999999999999999
Q ss_pred CEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCCCcccchHHHHH
Q 016981 257 GTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVAPFWPAVIH 332 (379)
Q Consensus 257 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~~~~~~~ 332 (379)
|++++.++...... .......+......+....+.+.+++.++|+++||++++++.+..+..+++..+..
T Consensus 160 G~l~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~ 229 (273)
T 3bus_A 160 GTVAIADFVLLAPV------EGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDISAQARPSLVKTAE 229 (273)
T ss_dssp EEEEEEEEEESSCC------CHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEECHHHHTTHHHHHHH
T ss_pred eEEEEEEeeccCCC------ChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEECcHhHHHHHHHHHH
Confidence 99999987644311 11111122222222223346799999999999999999998877666555544443
No 2
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.96 E-value=9.4e-28 Score=222.16 Aligned_cols=223 Identities=26% Similarity=0.477 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHccC--chhHHHhhh-ccccccccCCCCCCCcchHHHHHHHHHHHHHHHc----CCCCCCCCCCCEEEE
Q 016981 92 ARELKEGIAEFYDES--SSLWEDIWG-DHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFA----GVSEDPTKRPKNVVD 164 (379)
Q Consensus 92 ~~~~~~~i~~~yd~~--~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~vLD 164 (379)
.....+.+..|||.. ..+|+..|+ ++++.+||...... ........+.++.+++.+ .+.+ +.+|||
T Consensus 16 ~~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~~vLD 88 (297)
T 2o57_A 16 SKTVKDNAEIYYDDDDSDRFYFHVWGGEDIHVGLYKEPVDQ--DEIREASLRTDEWLASELAMTGVLQR-----QAKGLD 88 (297)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCSCCCCSSGGG--SCHHHHHHHHHHHHHHHHHHTTCCCT-----TCEEEE
T ss_pred HHHHHHHHHHHcCCccchhHHHHHhCCCceEEEecCCCCCC--cchHHHHHHHHHHHHHHhhhccCCCC-----CCEEEE
Confidence 445567789999987 488988885 68889999765100 126677777888888887 5554 889999
Q ss_pred eCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCCHHH
Q 016981 165 VGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSK 244 (379)
Q Consensus 165 iGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~ 244 (379)
+|||+|.++..+++.++.+|+|+|+|+.+++.|+++....++++++.+..+|+.++|+++++||+|++..+++|++++..
T Consensus 89 iGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 168 (297)
T 2o57_A 89 LGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK 168 (297)
T ss_dssp ETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH
T ss_pred eCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH
Confidence 99999999999999877899999999999999999999888878999999999999998899999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCCCcc
Q 016981 245 FVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVA 324 (379)
Q Consensus 245 ~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~ 324 (379)
++++++++|||||++++.++........ ..+ ..++. ....+.+.+.+++.++|+++||+++++.++...+.
T Consensus 169 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~----~~~~~----~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 239 (297)
T 2o57_A 169 VFQECARVLKPRGVMAITDPMKEDGIDK-SSI----QPILD----RIKLHDMGSLGLYRSLAKECGLVTLRTFSRPDSLV 239 (297)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEECTTCCG-GGG----HHHHH----HHTCSSCCCHHHHHHHHHHTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEeccCCCCch-HHH----HHHHH----HhcCCCCCCHHHHHHHHHHCCCeEEEEEECchhhH
Confidence 9999999999999999998765432211 111 12222 12233456899999999999999999988766555
Q ss_pred cchHHH
Q 016981 325 PFWPAV 330 (379)
Q Consensus 325 ~~~~~~ 330 (379)
++|...
T Consensus 240 ~~~~~~ 245 (297)
T 2o57_A 240 HHYSKV 245 (297)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544433
No 3
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.94 E-value=4.7e-25 Score=204.61 Aligned_cols=217 Identities=17% Similarity=0.200 Sum_probs=169.9
Q ss_pred HHHHHHHHHHccCchhHHHhhhcccc--ccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccH
Q 016981 94 ELKEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGG 171 (379)
Q Consensus 94 ~~~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~ 171 (379)
..++.+..|||..+++|..+++..++ .++|..... ....++...++.+++.+++.+ +.+|||||||+|.
T Consensus 15 ~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~----~l~~a~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G~ 85 (302)
T 3hem_A 15 PPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDM----TLEEAQYAKRKLALDKLNLEP-----GMTLLDIGCGWGS 85 (302)
T ss_dssp CCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHHTTCCCT-----TCEEEEETCTTSH
T ss_pred chHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCC----CHHHHHHHHHHHHHHHcCCCC-----cCEEEEeeccCcH
Confidence 44677999999999999999887544 456665432 267788888999999887665 8899999999999
Q ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCCH---------
Q 016981 172 SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK--------- 242 (379)
Q Consensus 172 ~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~--------- 242 (379)
++..+++.++.+|+|+|+|+.+++.|++++...+++.++.+..+|+.++ +++||+|++..+++|++++
T Consensus 86 ~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~ 162 (302)
T 3hem_A 86 TMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERY 162 (302)
T ss_dssp HHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHH
T ss_pred HHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHH
Confidence 9999999877899999999999999999999998877999999999876 6899999999999999765
Q ss_pred HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccc-c--chH---HHHHHHH-HhhccCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 243 SKFVSELARVTAPAGTIIIVTWCHRDLAPSEES-L--QPW---EQELLKK-ICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 243 ~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~-~--~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
..+++++.++|||||++++.++........... . ... ...++.. +.+.. .+.+.+++.++++++||++++
T Consensus 163 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~s~~~~~~~l~~aGf~~~~ 239 (302)
T 3hem_A 163 DTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG---RLPRISQVDYYSSNAGWKVER 239 (302)
T ss_dssp HHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC---CCCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC---CCCCHHHHHHHHHhCCcEEEE
Confidence 799999999999999999998765432100000 0 000 0012221 11222 245899999999999999999
Q ss_pred EEecCCCccc
Q 016981 316 AEDWSQNVAP 325 (379)
Q Consensus 316 ~~~~~~~~~~ 325 (379)
++++..+...
T Consensus 240 ~~~~~~~y~~ 249 (302)
T 3hem_A 240 YHRIGANYVP 249 (302)
T ss_dssp EEECGGGHHH
T ss_pred EEeCchhHHH
Confidence 9887666443
No 4
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.94 E-value=1.7e-25 Score=205.90 Aligned_cols=216 Identities=18% Similarity=0.181 Sum_probs=164.9
Q ss_pred HHHHHHHHccCchhHHHhhhcccc--ccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHH
Q 016981 96 KEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSS 173 (379)
Q Consensus 96 ~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~ 173 (379)
.+.++.|||..+++|+.+++..++ .++|..... ....++...++.+++.+++.+ +.+|||||||+|.++
T Consensus 9 ~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~----~l~~a~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~ 79 (287)
T 1kpg_A 9 FANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDM----TLQEAQIAKIDLALGKLGLQP-----GMTLLDVGCGWGATM 79 (287)
T ss_dssp HHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHTTTTCCT-----TCEEEEETCTTSHHH
T ss_pred HHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCC----CHHHHHHHHHHHHHHHcCCCC-----cCEEEEECCcccHHH
Confidence 456999999999999988887643 567765432 267778888888888877654 889999999999999
Q ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCC--CCHHHHHHHHHH
Q 016981 174 RYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHM--PDKSKFVSELAR 251 (379)
Q Consensus 174 ~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~--~~~~~~l~~~~r 251 (379)
..+++..+.+|+|+|+|+.+++.|++++...++.+++.+..+|+.+++ ++||+|++..+++|+ .++..+++++.+
T Consensus 80 ~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~ 156 (287)
T 1kpg_A 80 MRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHR 156 (287)
T ss_dssp HHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHH
Confidence 999976688999999999999999999998887778999999998765 789999999999999 678999999999
Q ss_pred hcCCCCEEEEEeccCCCCCCC---ccccchHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCceeEEEecCCCc
Q 016981 252 VTAPAGTIIIVTWCHRDLAPS---EESLQPWEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (379)
Q Consensus 252 ~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~ 323 (379)
+|||||++++.++........ ..............+... +....+.+.+++.++++++||+++++..+..+.
T Consensus 157 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 232 (287)
T 1kpg_A 157 LLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQPHY 232 (287)
T ss_dssp HSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECHHHH
T ss_pred hcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCcHhH
Confidence 999999999998764431110 000000000111111111 111234589999999999999999998765543
No 5
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.92 E-value=2.5e-24 Score=201.12 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHccCchhHHHhhhcccc--ccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCccc
Q 016981 93 RELKEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIG 170 (379)
Q Consensus 93 ~~~~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG 170 (379)
...++.+..+||..+++|+.+++..++ .++|..... ....++...+..+++.+++.+ +.+|||+|||+|
T Consensus 32 ~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G 102 (318)
T 2fk8_A 32 RTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPEL----TLEEAQYAKVDLNLDKLDLKP-----GMTLLDIGCGWG 102 (318)
T ss_dssp ------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHTTSCCCT-----TCEEEEESCTTS
T ss_pred hhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCC----CHHHHHHHHHHHHHHhcCCCC-----cCEEEEEcccch
Confidence 455667889999999999888876543 456664332 267777888888888877654 889999999999
Q ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCC--CCHHHHHHH
Q 016981 171 GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHM--PDKSKFVSE 248 (379)
Q Consensus 171 ~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~--~~~~~~l~~ 248 (379)
.++..+++.++.+|+|+|+|+.+++.|++++...++.+++.+..+|+.+++ ++||+|++..+++|+ +++..++++
T Consensus 103 ~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~ 179 (318)
T 2fk8_A 103 TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKR 179 (318)
T ss_dssp HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHH
Confidence 999999987778999999999999999999998888778999999998774 789999999999999 578999999
Q ss_pred HHHhcCCCCEEEEEeccCCCCCCCcc---ccchHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCceeEEEecCCC
Q 016981 249 LARVTAPAGTIIIVTWCHRDLAPSEE---SLQPWEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (379)
Q Consensus 249 ~~r~LkpgG~l~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 322 (379)
+.++|||||++++.++.......... .+......+...+... +....+.+.+++.++|+++||+++++..+..+
T Consensus 180 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~ 257 (318)
T 2fk8_A 180 CFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPH 257 (318)
T ss_dssp HHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECHHH
T ss_pred HHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecchh
Confidence 99999999999999876543210000 0000000011111111 11123458999999999999999988766543
No 6
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.91 E-value=3.2e-24 Score=199.88 Aligned_cols=176 Identities=25% Similarity=0.410 Sum_probs=141.0
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
....+++.++ +. ++.+|||+|||+|.++..+++.++.+|+|+|+|+.+++.|++++...++.+++.+..+|+.+
T Consensus 104 ~~~~l~~~l~~~~-----~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 178 (312)
T 3vc1_A 104 QAEFLMDHLGQAG-----PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD 178 (312)
T ss_dssp HHHHHHTTSCCCC-----TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHhccCC-----CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc
Confidence 3444555554 33 48899999999999999999987789999999999999999999999887799999999999
Q ss_pred CCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCH
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
+++++++||+|++..+++|+ ++..+++++.++|||||++++.++....... ....... .+... +.+.+.+.
T Consensus 179 ~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~-~~~~~----~~~~~~s~ 249 (312)
T 3vc1_A 179 TPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYG---QPSKWVS-QINAH----FECNIHSR 249 (312)
T ss_dssp CCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTC---SCCHHHH-HHHHH----HTCCCCBH
T ss_pred CCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEcccccccc---chhHHHH-HHHhh----hcCCCCCH
Confidence 99888999999999999999 6999999999999999999999876554321 1222222 12111 12236689
Q ss_pred HHHHHHHHhCCCceeEEEecCCCcccchHHH
Q 016981 300 ADYVKLLQSLSLEDIKAEDWSQNVAPFWPAV 330 (379)
Q Consensus 300 ~~~~~~l~~aGF~~v~~~~~~~~~~~~~~~~ 330 (379)
+++.++|+++||++++++++.....++|...
T Consensus 250 ~~~~~~l~~aGf~~~~~~~~~~~~~~~w~~~ 280 (312)
T 3vc1_A 250 REYLRAMADNRLVPHTIVDLTPDTLPYWELR 280 (312)
T ss_dssp HHHHHHHHTTTEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEeCCHHHHHHHHHH
Confidence 9999999999999999998875555555443
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.90 E-value=1.5e-22 Score=182.91 Aligned_cols=163 Identities=18% Similarity=0.209 Sum_probs=132.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.+.+.+ +.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.|+++++..++.+++.+.++|+.++
T Consensus 24 ~~~~l~~~~~~~~-----~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 24 KYATLGRVLRMKP-----GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHTCCCT-----TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred HHHHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 4566666666554 88999999999999999999877899999999999999999999888877899999999998
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++ +++||+|++..+++|++++..++++++++|||||++++.+........ .. .+ ...........+.+.+
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-----~~---~~-~~~~~~~~~~~~~~~~ 168 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPA-----TE---EI-AQACGVSSTSDFLTLP 168 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCS-----SH---HH-HHTTTCSCGGGSCCHH
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCC-----hH---HH-HHHHhcccccccCCHH
Confidence 87 789999999999999999999999999999999999998754322111 11 11 1111111122466899
Q ss_pred HHHHHHHhCCCceeEEEe
Q 016981 301 DYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~ 318 (379)
++.++|+++||+++++..
T Consensus 169 ~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 169 GLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp HHHHHHHTTTBCCCEEEE
T ss_pred HHHHHHHHCCCeeEEEEe
Confidence 999999999999988753
No 8
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.90 E-value=1.4e-22 Score=183.58 Aligned_cols=169 Identities=22% Similarity=0.322 Sum_probs=132.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.+..+++.++..+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...++ +++.+.++|++++
T Consensus 25 ~~~~l~~~l~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l 97 (260)
T 1vl5_A 25 DLAKLMQIAALKG-----NEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQM 97 (260)
T ss_dssp CHHHHHHHHTCCS-----CCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CC
T ss_pred HHHHHHHHhCCCC-----CCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhC
Confidence 3455566655544 889999999999999999987 46999999999999999999988876 4899999999999
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++++++||+|++..+++|++|+..++++++++|||||++++.++..+.. ..+..+. ........... ...++.+
T Consensus 98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~-~~~~~~~ 171 (260)
T 1vl5_A 98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVFY-NYVEKERDYSH-HRAWKKS 171 (260)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHHH-HHHHHHHCTTC-CCCCBHH
T ss_pred CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHHH-HHHHHhcCccc-cCCCCHH
Confidence 9988999999999999999999999999999999999999987654321 1111111 11111111111 2356899
Q ss_pred HHHHHHHhCCCceeEEEecCCC
Q 016981 301 DYVKLLQSLSLEDIKAEDWSQN 322 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~~~~~ 322 (379)
++.++|+++||+++.+..+...
T Consensus 172 ~~~~~l~~aGf~~~~~~~~~~~ 193 (260)
T 1vl5_A 172 DWLKMLEEAGFELEELHCFHKT 193 (260)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEEeecc
Confidence 9999999999999888776543
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.90 E-value=1.3e-22 Score=183.88 Aligned_cols=154 Identities=15% Similarity=0.151 Sum_probs=119.1
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~ 234 (379)
++.+|||+|||+|..+..+++.+ +++|+|+|+|+.|++.|+++++..+...+++++++|+.++|+ +.||+|+++.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccceeee
Confidence 38999999999999999999875 569999999999999999999988877799999999999876 4699999999
Q ss_pred ccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhc--c-------------CCCCCC
Q 016981 235 SGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA--Y-------------YLPAWC 297 (379)
Q Consensus 235 ~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~ 297 (379)
+++|+++. ..+|++++++|||||+|++.+....... ................ + ......
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~----~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDA----KVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSH----HHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 99999754 5789999999999999999986543321 1111111111111000 0 001235
Q ss_pred CHHHHHHHHHhCCCceeEEE
Q 016981 298 STADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 298 ~~~~~~~~l~~aGF~~v~~~ 317 (379)
+.+++.++|+++||+.|++.
T Consensus 224 s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHcCCCeEEEE
Confidence 88999999999999998763
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.89 E-value=1.3e-22 Score=183.41 Aligned_cols=153 Identities=18% Similarity=0.254 Sum_probs=126.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.|++++...++++++.+.++|+.++++++++||+|++..+++
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 47899999999999999999987569999999999999999999999987789999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEE
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 317 (379)
|+ ++..+++++.++|||||++++.+........ .......+... .+.+.+.+++.++|+++||+++.+.
T Consensus 126 ~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 126 NI-GFERGMNEWSKYLKKGGFIAVSEASWFTSER-----PAEIEDFWMDA-----YPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp CC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCC-----CHHHHHHHHHH-----CTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCC-----hHHHHHHHHHh-----CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 99 8999999999999999999999854222111 11111222211 1235689999999999999999886
Q ss_pred ecCC
Q 016981 318 DWSQ 321 (379)
Q Consensus 318 ~~~~ 321 (379)
.+..
T Consensus 195 ~~~~ 198 (257)
T 3f4k_A 195 ILPE 198 (257)
T ss_dssp ECCG
T ss_pred ECCh
Confidence 5553
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.89 E-value=4.4e-22 Score=181.15 Aligned_cols=152 Identities=17% Similarity=0.235 Sum_probs=126.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|+++++..++++++.+.++|+.++++++++||+|++..+++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCce
Confidence 48999999999999999999985569999999999999999999999988889999999999988889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEE
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 317 (379)
|+ ++..+++++.++|||||++++.+........ ......++... .+.+.+.+++.++|+++||+++++.
T Consensus 126 ~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 126 NI-GFERGLNEWRKYLKKGGYLAVSECSWFTDER-----PAEINDFWMDA-----YPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp GT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCC-----CHHHHHHHHHH-----CTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred ec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCC-----hHHHHHHHHHh-----CCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 99 8999999999999999999999865322111 11111222111 1235689999999999999999887
Q ss_pred ecC
Q 016981 318 DWS 320 (379)
Q Consensus 318 ~~~ 320 (379)
.+.
T Consensus 195 ~~~ 197 (267)
T 3kkz_A 195 ILP 197 (267)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.89 E-value=1.9e-21 Score=174.05 Aligned_cols=169 Identities=22% Similarity=0.385 Sum_probs=133.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.....++.+.+.+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++.+..+|++++
T Consensus 9 ~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 9 SLGLMIKTAECRA-----EHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESL 81 (239)
T ss_dssp HHHHHHHHHTCCT-----TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBC
T ss_pred CcchHHHHhCcCC-----CCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccC
Confidence 3445556656654 899999999999999999987 56999999999999999999988876 4899999999999
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++++++||+|++..+++|++++..++++++++|||||++++.+...+.. ..+..+. ........... ...++.+
T Consensus 82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~-~~~~~~~ 155 (239)
T 1xxl_A 82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFV-NHLNRLRDPSH-VRESSLS 155 (239)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHH-HHHHHHHCTTC-CCCCBHH
T ss_pred CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHH-HHHHHhccccc-cCCCCHH
Confidence 9888999999999999999999999999999999999999988654321 1111111 11111111211 2356899
Q ss_pred HHHHHHHhCCCceeEEEecCCC
Q 016981 301 DYVKLLQSLSLEDIKAEDWSQN 322 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~~~~~ 322 (379)
++.++|+++||+++.+..+..+
T Consensus 156 ~~~~ll~~aGf~~~~~~~~~~~ 177 (239)
T 1xxl_A 156 EWQAMFSANQLAYQDIQKWNLP 177 (239)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHCCCcEEEEEeecCc
Confidence 9999999999999988876544
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.88 E-value=2e-22 Score=182.81 Aligned_cols=167 Identities=24% Similarity=0.471 Sum_probs=133.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.+..+++.+++.+ +.+|||+|||+|.++..+++.++.+|+|+|+|+.+++.|+++.... +++.+.++|+.++
T Consensus 43 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 43 ATKKILSDIELNE-----NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK 114 (266)
T ss_dssp HHHHHTTTCCCCT-----TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC
T ss_pred HHHHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC
Confidence 4556666665544 8899999999999999999977789999999999999999876443 5899999999999
Q ss_pred CCCCCcccEEEeccccCCC--CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016981 221 PFPDGQFDLVWSMESGEHM--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~--~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
++++++||+|++..+++|+ .++..++++++++|||||++++.++..... ..+........... + ..+++
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~----~~~~~~~~~~~~~~----~-~~~~~ 185 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEK----ENWDDEFKEYVKQR----K-YTLIT 185 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCG----GGCCHHHHHHHHHH----T-CCCCC
T ss_pred CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCc----ccchHHHHHHHhcC----C-CCCCC
Confidence 9888999999999999999 788999999999999999999998755431 12222222222211 1 12558
Q ss_pred HHHHHHHHHhCCCceeEEEecCCCcc
Q 016981 299 TADYVKLLQSLSLEDIKAEDWSQNVA 324 (379)
Q Consensus 299 ~~~~~~~l~~aGF~~v~~~~~~~~~~ 324 (379)
.+++.++|+++||+++++..+..+..
T Consensus 186 ~~~~~~~l~~~Gf~~~~~~~~~~~~~ 211 (266)
T 3ujc_A 186 VEEYADILTACNFKNVVSKDLSDYWN 211 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEEECHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEeCCHHHH
Confidence 99999999999999999887665443
No 14
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.88 E-value=1.3e-21 Score=178.85 Aligned_cols=166 Identities=23% Similarity=0.329 Sum_probs=130.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ +++.+..+|+.++++++++||+|++..++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 48899999999999999999987 68999999999999999999998877 48999999999998888999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCC--CCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcee
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLA--PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 314 (379)
+|++++..+++++.++|||||++++.+....... +...........+.. ....... ..++..++.++|+++||+++
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR-VQAYMKG-NSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH-HHHHTTC-CTTGGGGHHHHHHHTTCEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH-HHHhcCC-CcchHHHHHHHHHHCCCCeE
Confidence 9999999999999999999999999885432211 111111111111111 1111111 23467889999999999999
Q ss_pred EEEecCCCcccc
Q 016981 315 KAEDWSQNVAPF 326 (379)
Q Consensus 315 ~~~~~~~~~~~~ 326 (379)
+++....+....
T Consensus 194 ~~~~~~~~~~~~ 205 (276)
T 3mgg_A 194 RVEPRMVYIDSS 205 (276)
T ss_dssp EEEEEEEEECTT
T ss_pred EEeeEEEECCCC
Confidence 998776665543
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.88 E-value=9.8e-22 Score=180.58 Aligned_cols=177 Identities=16% Similarity=0.137 Sum_probs=132.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
.+.+..++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++++++.++.+|+.
T Consensus 55 ~~~l~~~l~~~~~------~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 127 (285)
T 4htf_A 55 WQDLDRVLAEMGP------QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQ 127 (285)
T ss_dssp HHHHHHHHHHTCS------SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGG
T ss_pred HHHHHHHHHhcCC------CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHH
Confidence 3445666666542 2679999999999999999998 78999999999999999999998887778999999999
Q ss_pred CCC-CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhh----ccCC
Q 016981 219 QQP-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD----AYYL 293 (379)
Q Consensus 219 ~~~-~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 293 (379)
+++ +++++||+|++..+++|++++..+++++.++|||||++++.++......... ............... ....
T Consensus 128 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 206 (285)
T 4htf_A 128 DVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHN-MVAGNFDYVQAGMPKKKKRTLSP 206 (285)
T ss_dssp GTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHH-HHTTCHHHHHTTCCCC----CCC
T ss_pred HhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHH-HHhcCHHHHhhhccccccccCCC
Confidence 986 7789999999999999999999999999999999999999885422100000 000000000000000 0111
Q ss_pred CCCCCHHHHHHHHHhCCCceeEEEecCCCc
Q 016981 294 PAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (379)
Q Consensus 294 ~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~ 323 (379)
..+++++++.++|+++||+++++..+....
T Consensus 207 ~~~~~~~~l~~~l~~aGf~v~~~~~~~~~~ 236 (285)
T 4htf_A 207 DYPRDPTQVYLWLEEAGWQIMGKTGVRVFH 236 (285)
T ss_dssp SCCBCHHHHHHHHHHTTCEEEEEEEESSSG
T ss_pred CCCCCHHHHHHHHHHCCCceeeeeeEEEee
Confidence 245689999999999999999988775443
No 16
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.88 E-value=2.8e-22 Score=174.72 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=137.8
Q ss_pred HHHHHHccCchhHHHhhhccccccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHH
Q 016981 98 GIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLA 177 (379)
Q Consensus 98 ~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~ 177 (379)
.+.++|+..+..|+..+....... ......+..++... +.+|||+|||+|.++..++
T Consensus 4 ~~~~~y~~~a~~y~~~~~~~~~~~--------------~~~~~~l~~~~~~~---------~~~vLDiGcG~G~~~~~l~ 60 (203)
T 3h2b_A 4 DVSKAYSSPTFDAEALLGTVISAE--------------DPDRVLIEPWATGV---------DGVILDVGSGTGRWTGHLA 60 (203)
T ss_dssp HHHHHHHCTTTCHHHHTCSSCCTT--------------CTTHHHHHHHHHHC---------CSCEEEETCTTCHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHhhhhcccc--------------HHHHHHHHHHhccC---------CCeEEEecCCCCHHHHHHH
Confidence 477889988888877654321100 00122344444331 6789999999999999999
Q ss_pred HHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC--CHHHHHHHHHHhcCC
Q 016981 178 KKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMP--DKSKFVSELARVTAP 255 (379)
Q Consensus 178 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~l~~~~r~Lkp 255 (379)
+. +.+|+|+|+|+.+++.++++. +++.+.++|+.++++++++||+|++..+++|++ ++..++++++++|||
T Consensus 61 ~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~p 133 (203)
T 3h2b_A 61 SL-GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVED 133 (203)
T ss_dssp HT-TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEE
T ss_pred hc-CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCC
Confidence 87 789999999999999999873 479999999999988889999999999999997 889999999999999
Q ss_pred CCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCC
Q 016981 256 AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 256 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 321 (379)
||++++..+.......... ......+++.+++.++|+++||+++++.....
T Consensus 134 gG~l~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 134 GGGLLMSFFSGPSLEPMYH---------------PVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp EEEEEEEEECCSSCEEECC---------------SSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred CcEEEEEEccCCchhhhhc---------------hhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 9999999865543111100 01111246899999999999999999886655
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.88 E-value=2.1e-21 Score=171.16 Aligned_cols=155 Identities=22% Similarity=0.291 Sum_probs=130.6
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
..+++.+++.. +.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+++ ++.+..+|+.++
T Consensus 27 ~~~~~~~~~~~-----~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~ 100 (219)
T 3dh0_A 27 EKVLKEFGLKE-----GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKI 100 (219)
T ss_dssp HHHHHHHTCCT-----TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBC
T ss_pred HHHHHHhCCCC-----CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccC
Confidence 44555555554 8899999999999999999986 469999999999999999999888874 899999999998
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++++++||+|++..+++|++++..+++++.++|||||++++.++......... .....++.+
T Consensus 101 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------------~~~~~~~~~ 162 (219)
T 3dh0_A 101 PLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP------------------PPEEVYSEW 162 (219)
T ss_dssp SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC------------------CGGGSCCHH
T ss_pred CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCC------------------chhcccCHH
Confidence 88889999999999999999999999999999999999999987654431110 011245899
Q ss_pred HHHHHHHhCCCceeEEEecCC
Q 016981 301 DYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~~~~ 321 (379)
++.++|+++||++++...+..
T Consensus 163 ~~~~~l~~~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 163 EVGLILEDAGIRVGRVVEVGK 183 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEETT
T ss_pred HHHHHHHHCCCEEEEEEeeCC
Confidence 999999999999999876654
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.88 E-value=2.7e-22 Score=178.81 Aligned_cols=163 Identities=18% Similarity=0.180 Sum_probs=122.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+ ++.+..+|+.+++++ ++||+|++..++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-EKYDMVVSALSI 119 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC-SCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC-CCceEEEEeCcc
Confidence 47899999999999999999987 7899999999999999999875432 899999999998876 899999999999
Q ss_pred CCCCCHH--HHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHH----------HHhhccCCCCCCCHHHHHH
Q 016981 237 EHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLK----------KICDAYYLPAWCSTADYVK 304 (379)
Q Consensus 237 ~~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 304 (379)
+|+++.. .++++++++|||||++++.++..................... ...........++.+++.+
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLN 199 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHH
Confidence 9998765 599999999999999999987654321111100000101100 0001111224568999999
Q ss_pred HHHhCCCceeEEEecCCCcc
Q 016981 305 LLQSLSLEDIKAEDWSQNVA 324 (379)
Q Consensus 305 ~l~~aGF~~v~~~~~~~~~~ 324 (379)
+|+++||+++++.....+..
T Consensus 200 ll~~aGF~~v~~~~~~~~~~ 219 (234)
T 3dtn_A 200 WLKEAGFRDVSCIYKYYQFA 219 (234)
T ss_dssp HHHHTTCEEEEEEEEETTEE
T ss_pred HHHHcCCCceeeeeeeccee
Confidence 99999999998875554443
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.88 E-value=1.1e-22 Score=179.57 Aligned_cols=149 Identities=16% Similarity=0.191 Sum_probs=115.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++. .++.+..+|+.+++++ ++||+|++..+++|
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred CCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 789999999999999999987 7899999999999999998763 4789999999999887 89999999999999
Q ss_pred CCCHHH--HHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHH----HhhccCCCCCCCHHHHHHHHHhCCCc
Q 016981 239 MPDKSK--FVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK----ICDAYYLPAWCSTADYVKLLQSLSLE 312 (379)
Q Consensus 239 ~~~~~~--~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~aGF~ 312 (379)
++++.. +++++.++|||||.+++.+...... ............. .........+.+.+++.++|+++||+
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQ----DAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSH----HHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccCh----HHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 998876 9999999999999999998543221 1111000000000 00000011245899999999999998
Q ss_pred eeEEEe
Q 016981 313 DIKAED 318 (379)
Q Consensus 313 ~v~~~~ 318 (379)
++....
T Consensus 195 v~~~~~ 200 (220)
T 3hnr_A 195 VTFTRL 200 (220)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 877653
No 20
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.88 E-value=5.2e-22 Score=174.57 Aligned_cols=167 Identities=18% Similarity=0.171 Sum_probs=129.7
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
.....+++.++..+ + +|||+|||+|.++..+++..+.+|+|+|+|+.+++.|++++...++.+++.+.++|+.+
T Consensus 31 ~~~~~~~~~~~~~~-----~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 31 IIAENIINRFGITA-----G-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHHHHCCCE-----E-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred HHHHHHHHhcCCCC-----C-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence 35566666666443 4 99999999999999999875679999999999999999999998887799999999999
Q ss_pred CCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhcc-----CCC
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY-----YLP 294 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 294 (379)
+++++++||+|++..+++|++++..++++++++|||||.+++.+..... .+.......+......+ ...
T Consensus 105 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (219)
T 3dlc_A 105 IPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK------ELRDSISAEMIRKNPDWKEFNRKNI 178 (219)
T ss_dssp CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH------HHHHHHHHHHHHHCTTHHHHHHHHS
T ss_pred CCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH------HHHHHHHHHHHHhHHHHHhhhhhcc
Confidence 9988899999999999999999999999999999999999998743321 11111111111110000 001
Q ss_pred CCCCHHHHHHHHHhCCCceeEEEe
Q 016981 295 AWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 295 ~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
..++.+++.++|+++||+++++..
T Consensus 179 ~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 179 SQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred ccCCHHHHHHHHHHcCCCeEEEEe
Confidence 234789999999999999988763
No 21
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.87 E-value=5.8e-21 Score=174.36 Aligned_cols=185 Identities=14% Similarity=0.176 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC--CEEEEEeCCHH------HHHHHHHHHHHcC
Q 016981 134 HRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPV------QAQRANALAAARG 205 (379)
Q Consensus 134 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~------~~~~a~~~~~~~~ 205 (379)
...++......+++.+++.+ +.+|||||||+|.++..+++.++ .+|+|+|+|+. +++.|++++...+
T Consensus 24 ~~~~~~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~ 98 (275)
T 3bkx_A 24 IQRRQTAHRLAIAEAWQVKP-----GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP 98 (275)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-----TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHcCCCC-----CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC
Confidence 55667777888888877665 89999999999999999999863 79999999997 9999999998887
Q ss_pred CCCCeEEEEcc---CCCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHH
Q 016981 206 LADKVSFQVGD---ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQE 282 (379)
Q Consensus 206 ~~~~i~~~~~d---~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 282 (379)
+.+++.+..+| ...+++++++||+|++..+++|++++..+++.+.++++|||++++.++......+ .........
T Consensus 99 ~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~--~~~~~~~~~ 176 (275)
T 3bkx_A 99 LGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTAL--DQIGHLQAA 176 (275)
T ss_dssp TGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSG--GGHHHHHHH
T ss_pred CCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCch--hhhhHHHHH
Confidence 76789999998 4455677889999999999999999988888888888889999999976544321 111111111
Q ss_pred HHHH----Hhh--ccCCCCCCCHHHHHHHHHhCCCceeEEEecCCCccc
Q 016981 283 LLKK----ICD--AYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVAP 325 (379)
Q Consensus 283 ~~~~----~~~--~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~ 325 (379)
+... ... ......+++.+++.++|+++||+++++..+..+...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~~~~~~ 225 (275)
T 3bkx_A 177 MIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVEDPTLD 225 (275)
T ss_dssp HHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBCCTTCT
T ss_pred HHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEecCCCCC
Confidence 1111 111 111224679999999999999999998877544433
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.87 E-value=1.7e-21 Score=174.33 Aligned_cols=149 Identities=21% Similarity=0.310 Sum_probs=121.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ...++.+..+|+.++++++++||+|++..+++|
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 789999999999999999997 789999999999999998864 235899999999999988899999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEe
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
++++..++++++++|||||++++.++....... ...+ ............++++++.++|+++||++++...
T Consensus 129 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKSDGYACIAILGPTAKPR-ENSY--------PRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGG-GGGG--------GGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhh-hhhh--------hhhccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 999999999999999999999999865432111 1101 1111111122457899999999999999999876
Q ss_pred cCC
Q 016981 319 WSQ 321 (379)
Q Consensus 319 ~~~ 321 (379)
+..
T Consensus 200 ~~~ 202 (242)
T 3l8d_A 200 VYK 202 (242)
T ss_dssp EEC
T ss_pred ccc
Confidence 543
No 23
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=7.6e-22 Score=179.07 Aligned_cols=163 Identities=21% Similarity=0.211 Sum_probs=126.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
..+.+++.++..+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++. ++.|.++|++++
T Consensus 22 ~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~ 88 (261)
T 3ege_A 22 IVNAIINLLNLPK-----GSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC
T ss_pred HHHHHHHHhCCCC-----CCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC
Confidence 4455566665544 899999999999999999985 789999999999999876532 799999999999
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++++++||+|++..+++|++++..++++++++|| ||++++.++.......... ............ ..+.+.+
T Consensus 89 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~ 160 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWL--YDYFPFLWEDAL-----RFLPLDE 160 (261)
T ss_dssp CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGG--GGTCHHHHHHHH-----TSCCHHH
T ss_pred CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHH--HHHHHHHhhhhh-----hhCCCHH
Confidence 9888999999999999999999999999999999 9999998875433221110 011111111111 1244788
Q ss_pred HHHHHHHhCCCceeEEEecCCCccc
Q 016981 301 DYVKLLQSLSLEDIKAEDWSQNVAP 325 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~~~~~~~~ 325 (379)
++. +|+++||+++++..+..++..
T Consensus 161 ~~~-~l~~aGF~~v~~~~~~~p~~~ 184 (261)
T 3ege_A 161 QIN-LLQENTKRRVEAIPFLLPHDL 184 (261)
T ss_dssp HHH-HHHHHHCSEEEEEECCEETTC
T ss_pred HHH-HHHHcCCCceeEEEecCCCcC
Confidence 899 999999999999888766654
No 24
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.87 E-value=1.7e-21 Score=174.61 Aligned_cols=198 Identities=13% Similarity=0.170 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHccCchhHHHhhhccccccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccH
Q 016981 92 ARELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGG 171 (379)
Q Consensus 92 ~~~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~ 171 (379)
....++...+||+.....|+..++.. .. .. ..........+..++..+. ...++.+|||+|||+|.
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~------~~---~~-~~~~~~~~~~~~~l~~~~~----~~~~~~~vLDiGcG~G~ 92 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGY------GH---IS-SIDINSSRKFLQRFLREGP----NKTGTSCALDCGAGIGR 92 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTC------GG---GH-HHHHHHHHHHHHGGGC--------CCCCSEEEEETCTTTH
T ss_pred cchhHHHHHHHHhcCCccccccccCC------CC---cc-hhhHHhHHHHHHHHHHhcc----cCCCCCEEEEECCCCCH
Confidence 44566778888888877777655421 00 00 0011122233333332221 11247899999999999
Q ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCCH--HHHHHHH
Q 016981 172 SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK--SKFVSEL 249 (379)
Q Consensus 172 ~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~ 249 (379)
++..+++....+|+|+|+|+.+++.|++++...+ ..++.+..+|+.++++++++||+|++..+++|+++. ..+++++
T Consensus 93 ~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~ 171 (241)
T 2ex4_A 93 ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRC 171 (241)
T ss_dssp HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHH
Confidence 9999988766699999999999999999887653 246899999999888877899999999999999885 4899999
Q ss_pred HHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 250 ARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 250 ~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
.++|||||++++.+..... ...+.. .......+.+++.++|+++||++++.....
T Consensus 172 ~~~LkpgG~l~i~~~~~~~----~~~~~~------------~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 172 KGSLRPNGIIVIKDNMAQE----GVILDD------------VDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp HHHEEEEEEEEEEEEEBSS----SEEEET------------TTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHhcCCCeEEEEEEccCCC----cceecc------------cCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 9999999999998865433 000100 000012379999999999999999887553
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=6e-21 Score=167.84 Aligned_cols=189 Identities=20% Similarity=0.241 Sum_probs=133.1
Q ss_pred HHHHHHHHHHccCchhHHHhhhccccccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHH
Q 016981 94 ELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSS 173 (379)
Q Consensus 94 ~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~ 173 (379)
.+.+...++|+.....|+..+.. .....+..+++.+... .++.+|||+|||+|.++
T Consensus 6 ~~~~~~~~~~~~~a~~y~~~~~~--------------------~~~~~~~~~~~~l~~~----~~~~~vLdiG~G~G~~~ 61 (218)
T 3ou2_A 6 GLIESQLSYYRARASEYDATFVP--------------------YMDSAAPAALERLRAG----NIRGDVLELASGTGYWT 61 (218)
T ss_dssp HHHHHHHHHHHHHGGGHHHHHHH--------------------HHTTTHHHHHHHHTTT----TSCSEEEEESCTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh--------------------HHHHHHHHHHHHHhcC----CCCCeEEEECCCCCHHH
Confidence 44556778888777777654322 1111233444444321 13679999999999999
Q ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCCH--HHHHHHHHH
Q 016981 174 RYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK--SKFVSELAR 251 (379)
Q Consensus 174 ~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r 251 (379)
..+++. +.+|+|+|+|+.+++.+++ .+. .++.+..+|+.++ +++++||+|++..+++|++++ ..+++++.+
T Consensus 62 ~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~ 134 (218)
T 3ou2_A 62 RHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRS 134 (218)
T ss_dssp HHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHH
Confidence 999998 7899999999999999988 333 5899999999888 678999999999999999986 899999999
Q ss_pred hcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHH-hhcc-------CCCCCCCHHHHHHHHHhCCCceeEEEe
Q 016981 252 VTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI-CDAY-------YLPAWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 252 ~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
+|||||.+++.++...... +........... .... ....+++++++.++|+++||+++..+.
T Consensus 135 ~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 135 AVAPGGVVEFVDVTDHERR-----LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEV 204 (218)
T ss_dssp HEEEEEEEEEEEECCCC-----------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred HcCCCeEEEEEeCCCCccc-----cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeec
Confidence 9999999999987653211 000000000000 0000 012356999999999999999655443
No 26
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.86 E-value=4e-21 Score=183.96 Aligned_cols=154 Identities=19% Similarity=0.214 Sum_probs=122.4
Q ss_pred CCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-----C-C-CCCeEEEEccCCCC------C
Q 016981 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-----G-L-ADKVSFQVGDALQQ------P 221 (379)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-----~-~-~~~i~~~~~d~~~~------~ 221 (379)
.++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|+++++.. | . .+++.|.++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 358899999999999999999875 569999999999999999987654 3 2 25899999999987 8
Q ss_pred CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016981 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
+++++||+|+++.+++|++++..++++++++|||||+|++.++......+ ...... ... ........++.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~------~~~~~~-~~~-~~~~~~~~~~~~~ 233 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLS------EAAQQD-PIL-YGECLGGALYLED 233 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCC------HHHHHC-HHH-HHTTCTTCCBHHH
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccC------HhHhhh-HHH-hhcccccCCCHHH
Confidence 88899999999999999999999999999999999999999865443211 111110 011 1112223568899
Q ss_pred HHHHHHhCCCceeEEEe
Q 016981 302 YVKLLQSLSLEDIKAED 318 (379)
Q Consensus 302 ~~~~l~~aGF~~v~~~~ 318 (379)
+.++|+++||+++++..
T Consensus 234 ~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 234 FRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHCCCceEEEEe
Confidence 99999999999887654
No 27
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.86 E-value=4.7e-21 Score=172.76 Aligned_cols=188 Identities=14% Similarity=0.129 Sum_probs=139.1
Q ss_pred HHHHHHHHHccCchhHHHhhhccccccccCCCCCCCcchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHH
Q 016981 95 LKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSR 174 (379)
Q Consensus 95 ~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~ 174 (379)
.++....+|+.....|+...... .............+++.+... ++.+|||+|||+|.++.
T Consensus 49 ~~~~~~~~w~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~-----~~~~vLDiG~G~G~~~~ 109 (254)
T 1xtp_A 49 WYGKALEYWRTVPATVSGVLGGM--------------DHVHDVDIEGSRNFIASLPGH-----GTSRALDCGAGIGRITK 109 (254)
T ss_dssp HHHHHHHHHHTSCSSHHHHTTTC--------------GGGHHHHHHHHHHHHHTSTTC-----CCSEEEEETCTTTHHHH
T ss_pred hhhhhhhHHhcCCccccceecCc--------------CccCHHHHHHHHHHHHhhccc-----CCCEEEEECCCcCHHHH
Confidence 34456677777666555443221 002333444556667666543 38899999999999999
Q ss_pred HHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC--CHHHHHHHHHHh
Q 016981 175 YLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMP--DKSKFVSELARV 252 (379)
Q Consensus 175 ~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~l~~~~r~ 252 (379)
.+++....+|+|+|+|+.+++.|++++... .++.+.++|+.++++++++||+|++..+++|++ ++..++++++++
T Consensus 110 ~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~ 186 (254)
T 1xtp_A 110 NLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQA 186 (254)
T ss_dssp HTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHh
Confidence 999876568999999999999999987543 479999999999888889999999999999995 478999999999
Q ss_pred cCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEec
Q 016981 253 TAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 253 LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
|||||++++.+......... .. ......+++.+++.++|+++||+++++...
T Consensus 187 LkpgG~l~i~~~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 187 LTPNGYIFFKENCSTGDRFL---VD------------KEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp EEEEEEEEEEEEBC--CCEE---EE------------TTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred cCCCeEEEEEecCCCcccce---ec------------ccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 99999999998543221100 00 000111348999999999999999988654
No 28
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.86 E-value=4.3e-21 Score=172.08 Aligned_cols=153 Identities=11% Similarity=0.036 Sum_probs=116.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .++.+.++|+.++ +++++||+|++..+++|
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~-----~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLK-----DGITYIHSRFEDA-QLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSC-----SCEEEEESCGGGC-CCSSCEEEEEEESCGGG
T ss_pred CCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhh-----CCeEEEEccHHHc-CcCCcccEEEEhhHHHh
Confidence 678999999999999999987 5699999999999999998752 2799999999887 46789999999999999
Q ss_pred CCCHHHHHHHHH-HhcCCCCEEEEEeccCCCCCCCc----cccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 016981 239 MPDKSKFVSELA-RVTAPAGTIIIVTWCHRDLAPSE----ESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (379)
Q Consensus 239 ~~~~~~~l~~~~-r~LkpgG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 313 (379)
++++..++++++ ++|||||++++.+.......... ..+..+. .+... ........+++.+++.++|+++||++
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNS-AVTEA-EFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTT-CCCHH-HHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccch-hcccc-cccccccccCCHHHHHHHHHHCCCeE
Confidence 999999999999 99999999999885433210000 0000000 00000 00111123579999999999999999
Q ss_pred eEEEecC
Q 016981 314 IKAEDWS 320 (379)
Q Consensus 314 v~~~~~~ 320 (379)
+++..+.
T Consensus 194 ~~~~~~~ 200 (250)
T 2p7i_A 194 TYRSGIF 200 (250)
T ss_dssp EEEEEEE
T ss_pred EEEeeeE
Confidence 9987544
No 29
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.86 E-value=4.7e-21 Score=173.57 Aligned_cols=157 Identities=20% Similarity=0.209 Sum_probs=118.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++ . +..+++.+..+|+.++++++++||+|++..+++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 3789999999999999999987 789999999999999999987 2 233689999999999988889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY-YLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
|++++..+++++.++|||||++++. +....... ...+............... ....+++.+++.++|+++||+++..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASP-EWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCH-HHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccH-HHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 9999999999999999999999987 33221000 0001111122222111000 0012457889999999999998776
Q ss_pred Eec
Q 016981 317 EDW 319 (379)
Q Consensus 317 ~~~ 319 (379)
...
T Consensus 194 ~~~ 196 (263)
T 2yqz_A 194 EVA 196 (263)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 30
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.85 E-value=1.2e-20 Score=175.17 Aligned_cols=161 Identities=20% Similarity=0.242 Sum_probs=125.6
Q ss_pred CCCEEEEeCCcccHHHHHHH-HHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLA-KKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~-~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (379)
++.+|||+|||+|.++..++ ... +.+|+|+|+|+.+++.|++++...++.+++.++++|+.+++++ ++||+|+++.+
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 38899999999999999985 333 6799999999999999999998888777799999999999887 99999999999
Q ss_pred cCCCCCHHH---HHHHHHHhcCCCCEEEEEeccCCCCCCCcc-----ccchHHHHHHHHHhh---ccCCCCCCCHHHHHH
Q 016981 236 GEHMPDKSK---FVSELARVTAPAGTIIIVTWCHRDLAPSEE-----SLQPWEQELLKKICD---AYYLPAWCSTADYVK 304 (379)
Q Consensus 236 l~~~~~~~~---~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 304 (379)
++|++++.. ++++++++|||||++++.++.......... ............... ......+++.+++.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 999998865 799999999999999999876543322222 111111111111111 112224579999999
Q ss_pred HHHhCCCceeEEEec
Q 016981 305 LLQSLSLEDIKAEDW 319 (379)
Q Consensus 305 ~l~~aGF~~v~~~~~ 319 (379)
+|+++||+++++...
T Consensus 277 ~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 277 QLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHTTCEEEEEECC
T ss_pred HHHHCCCEEEEEEcc
Confidence 999999999998753
No 31
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.85 E-value=1e-20 Score=173.86 Aligned_cols=155 Identities=19% Similarity=0.213 Sum_probs=120.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (379)
++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+ .++.+.++|+.++++ +++||+|++..+
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 98 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIEL-NDKYDIAICHAF 98 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCC-SSCEEEEEEESC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCc-CCCeeEEEECCh
Confidence 48899999999999999999886 4799999999999999999987654 389999999999887 479999999999
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEecc-----CC-----CCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWC-----HR-----DLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKL 305 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (379)
++|++++..++++++++|||||++++.+.. .. ...+....+.. ....+.......+. .+.+.+++.++
T Consensus 99 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~~ 176 (284)
T 3gu3_A 99 LLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGV-LQKLFESDTQRNGK-DGNIGMKIPIY 176 (284)
T ss_dssp GGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHH-HHHHHHHHHHHTCC-CTTGGGTHHHH
T ss_pred hhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHH-HHHHHHHHhhhhcc-cccHHHHHHHH
Confidence 999999999999999999999999998854 10 00000011111 22223322222222 24467789999
Q ss_pred HHhCCCceeEEE
Q 016981 306 LQSLSLEDIKAE 317 (379)
Q Consensus 306 l~~aGF~~v~~~ 317 (379)
|+++||++|++.
T Consensus 177 l~~aGF~~v~~~ 188 (284)
T 3gu3_A 177 LSELGVKNIECR 188 (284)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCCeEEEE
Confidence 999999999883
No 32
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.85 E-value=5.8e-21 Score=166.65 Aligned_cols=155 Identities=15% Similarity=0.152 Sum_probs=117.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG-----------LADK 209 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----------~~~~ 209 (379)
.+.+++..+.+.. +.+|||+|||+|..+..++++ |.+|+|+|+|+.|++.|+++..... ...+
T Consensus 10 ~l~~~~~~l~~~~-----~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T 1pjz_A 10 DLQQYWSSLNVVP-----GARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 83 (203)
T ss_dssp HHHHHHHHHCCCT-----TCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred HHHHHHHhcccCC-----CCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc
Confidence 3444455555544 889999999999999999998 7899999999999999998764210 1247
Q ss_pred eEEEEccCCCCCCCC-CcccEEEeccccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHH
Q 016981 210 VSFQVGDALQQPFPD-GQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK 286 (379)
Q Consensus 210 i~~~~~d~~~~~~~~-~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (379)
+++.++|+.++++++ ++||+|++..+++|++. ...++++++++|||||++++.........
T Consensus 84 v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~---------------- 147 (203)
T 1pjz_A 84 IEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL---------------- 147 (203)
T ss_dssp SEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS----------------
T ss_pred cEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc----------------
Confidence 999999999998765 78999999999999864 35789999999999999555553322110
Q ss_pred HhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCC
Q 016981 287 ICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 321 (379)
....+...+.+++.+++++ ||+++..+....
T Consensus 148 ---~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 148 ---LEGPPFSVPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp ---SSSCCCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred ---cCCCCCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence 0011123589999999998 999887775544
No 33
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.85 E-value=6.4e-21 Score=174.63 Aligned_cols=153 Identities=16% Similarity=0.220 Sum_probs=119.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++. +++.+..+|+..+++ +++||+|++..+++|
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV-DKPLDAVFSNAMLHW 129 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC-SSCEEEEEEESCGGG
T ss_pred CCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc-CCCcCEEEEcchhhh
Confidence 789999999999999999984 789999999999999998864 478999999999887 589999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhh---cc-CCCCCCCHHHHHHHHHhCCCcee
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD---AY-YLPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~l~~aGF~~v 314 (379)
++++..++++++++|||||++++..+..... ..+.......+..... .. ....+.+.+++.++|+++||+++
T Consensus 130 ~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 205 (279)
T 3ccf_A 130 VKEPEAAIASIHQALKSGGRFVAEFGGKGNI----KYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVT 205 (279)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECTTTT----HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEE
T ss_pred CcCHHHHHHHHHHhcCCCcEEEEEecCCcch----HHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999987643221 1111111111211111 00 01135689999999999999999
Q ss_pred EEEecCCCc
Q 016981 315 KAEDWSQNV 323 (379)
Q Consensus 315 ~~~~~~~~~ 323 (379)
.+..+..++
T Consensus 206 ~~~~~~~~~ 214 (279)
T 3ccf_A 206 YAALFNRPT 214 (279)
T ss_dssp EEEEEECCE
T ss_pred EEEEecccc
Confidence 887665544
No 34
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.84 E-value=1.4e-20 Score=167.93 Aligned_cols=145 Identities=17% Similarity=0.242 Sum_probs=121.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+...++.+.++|+.+.+ ++++||+|++..+++|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhc
Confidence 459999999999999999875 77999999999999999999876544467999999999876 4569999999999999
Q ss_pred CC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 239 ~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
++ +...+++++.++|||||++++.++....... ..+..++.+++.++|+++||+++.+
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG--------------------GPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS--------------------CSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC--------------------CCCccCCHHHHHHHHHHcCCeEEEE
Confidence 98 8899999999999999999998865432211 1112358999999999999999999
Q ss_pred EecCCCccc
Q 016981 317 EDWSQNVAP 325 (379)
Q Consensus 317 ~~~~~~~~~ 325 (379)
+.....+.+
T Consensus 205 ~~~~~~~~~ 213 (235)
T 3lcc_A 205 EENPHAIPT 213 (235)
T ss_dssp EECTTCCTT
T ss_pred EecCCcccc
Confidence 887766654
No 35
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.84 E-value=2.4e-20 Score=166.94 Aligned_cols=141 Identities=18% Similarity=0.203 Sum_probs=114.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~ 235 (379)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.+..+|+.+. ++++++||+|++..+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred CCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 3789999999999999999987 78999999999999998863 78889998775 788899999999999
Q ss_pred cCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 016981 236 GEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (379)
Q Consensus 236 l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 313 (379)
++|++++ ..++++++++|||||++++..+.... + ..... .........+++.+++.++|+++||++
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-------~----~~~~~-~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS-------L----YSLIN-FYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS-------H----HHHHH-HTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch-------h----HHHHH-HhcCccccccCCHHHHHHHHHHCCCeE
Confidence 9999854 99999999999999999998865322 1 11111 111111124568999999999999999
Q ss_pred eEEEecC
Q 016981 314 IKAEDWS 320 (379)
Q Consensus 314 v~~~~~~ 320 (379)
+++..+.
T Consensus 179 ~~~~~~~ 185 (240)
T 3dli_A 179 VKIEFFE 185 (240)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9988775
No 36
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.84 E-value=2.5e-20 Score=165.69 Aligned_cols=159 Identities=22% Similarity=0.305 Sum_probs=123.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEccCCCCCCCCCcccEEEec
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPDGQFDLVWSM 233 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~fD~V~~~ 233 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++ ..++.+..+|+..+++++++||+|++.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3789999999999999999998 78999999999999999998876654 236899999999998888999999999
Q ss_pred cccCCCCCHH---HHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhh--cc-----------CCCCCC
Q 016981 234 ESGEHMPDKS---KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD--AY-----------YLPAWC 297 (379)
Q Consensus 234 ~~l~~~~~~~---~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~~~~~~ 297 (379)
.+++|++++. .+++++.++|||||++++.++......+ .+.......+..... .+ ....++
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK---LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH---HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH---HHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 9999999987 8999999999999999999876532211 111111011100000 00 001256
Q ss_pred CHHHHHHHHHhCCCceeEEEecC
Q 016981 298 STADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 298 ~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
+.+++.++|+++||+++++....
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~~~ 208 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRVKE 208 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEecc
Confidence 89999999999999999887543
No 37
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.84 E-value=4e-20 Score=166.74 Aligned_cols=159 Identities=15% Similarity=0.147 Sum_probs=117.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++.. ..++.+..+|+.++++++++||+|++..+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSLALH 119 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEchhhh
Confidence 388999999999999999998843399999999999999998764 3589999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCC----------ccccchHHHHHHHH-Hhh-c----cCCCCCCCHHH
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPS----------EESLQPWEQELLKK-ICD-A----YYLPAWCSTAD 301 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~-~----~~~~~~~~~~~ 301 (379)
|++++..++++++++|||||++++........... ......+. .++.. ... . .......+.++
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~ 198 (253)
T 3g5l_A 120 YIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVD-RYFNESMRTSHFLGEDVQKYHRTVTT 198 (253)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEEC-CTTCCCEEEEEETTEEEEEECCCHHH
T ss_pred hhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEec-cccccceEEEeeccccCccEecCHHH
Confidence 99999999999999999999999975321100000 00000000 00000 000 0 00001238999
Q ss_pred HHHHHHhCCCceeEEEecCC
Q 016981 302 YVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 302 ~~~~l~~aGF~~v~~~~~~~ 321 (379)
+.++|+++||+++++.+...
T Consensus 199 ~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 199 YIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp HHHHHHHTTEEEEEEECCCC
T ss_pred HHHHHHHcCCeeeeeecCCC
Confidence 99999999999999876543
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=3.6e-20 Score=162.34 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=113.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++ ++.+..+|+..++ ++++||+|++..+++|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 114 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHACLLH 114 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSCGGG
T ss_pred CCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCchhh
Confidence 789999999999999999987 789999999999999999886 4677889998888 6789999999999999
Q ss_pred CC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC-CceeE
Q 016981 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS-LEDIK 315 (379)
Q Consensus 239 ~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-F~~v~ 315 (379)
++ +...++++++++|||||++++......... .... . ....+++.+++.++|+++| |++++
T Consensus 115 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~-----------~---~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 115 VPRDELADVLKLIWRALKPGGLFYASYKSGEGEG--RDKL-----------A---RYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCE--ECTT-----------S---CEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred cCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccc--cccc-----------c---hhccCCCHHHHHHHHHhCCCcEEEE
Confidence 98 778999999999999999999875433210 0000 0 0113568999999999999 99998
Q ss_pred EEecC
Q 016981 316 AEDWS 320 (379)
Q Consensus 316 ~~~~~ 320 (379)
+....
T Consensus 179 ~~~~~ 183 (211)
T 3e23_A 179 VESSE 183 (211)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 87543
No 39
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.83 E-value=6.9e-20 Score=168.93 Aligned_cols=164 Identities=17% Similarity=0.176 Sum_probs=119.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-CCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...+...++.+.++|+.+.++ ++++||+|++..+++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFH 144 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGG
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhh
Confidence 7899999999999999988874449999999999999999999887766689999999999887 578999999999997
Q ss_pred C----CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCC----------Ccc-------ccchHHHHHHH-HHhhcc--CC
Q 016981 238 H----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAP----------SEE-------SLQPWEQELLK-KICDAY--YL 293 (379)
Q Consensus 238 ~----~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~----------~~~-------~~~~~~~~~~~-~~~~~~--~~ 293 (379)
| ..+...+++++.++|||||++++.......... ... .+.......+. ...... ..
T Consensus 145 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 224 (298)
T 1ri5_A 145 YAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCI 224 (298)
T ss_dssp GGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCc
Confidence 6 456689999999999999999998743210000 000 00000000000 000000 00
Q ss_pred CCCCCHHHHHHHHHhCCCceeEEEecCCC
Q 016981 294 PAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (379)
Q Consensus 294 ~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 322 (379)
..+++++++.++|+++||++++...+...
T Consensus 225 ~~~~~~~~l~~ll~~aGf~~v~~~~~~~~ 253 (298)
T 1ri5_A 225 EYFVDFTRMVDGFKRLGLSLVERKGFIDF 253 (298)
T ss_dssp EECCCHHHHHHHHHTTTEEEEEEEEHHHH
T ss_pred ccccCHHHHHHHHHHcCCEEEEecCHHHH
Confidence 13568999999999999999988765443
No 40
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=2.7e-20 Score=167.98 Aligned_cols=100 Identities=24% Similarity=0.365 Sum_probs=90.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|++ .+++.+.++|++++++++++||+|++..++||
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCCCCSSCEEEEEECSCCTT
T ss_pred CCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhcccCCcccEEEEeeehhH
Confidence 579999999999999999987 6799999999999988764 25899999999999999999999999999977
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCC
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 267 (379)
+ ++.+++++++|+|||||+|++..+...
T Consensus 112 ~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 112 F-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp C-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred h-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 6 688999999999999999999886543
No 41
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.4e-19 Score=167.41 Aligned_cols=160 Identities=21% Similarity=0.272 Sum_probs=121.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEccCCCCCCCC------Cccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQPFPD------GQFD 228 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~------~~fD 228 (379)
++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|+++++.. +...++.+.++|++++++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 38899999999999999999754 789999999999999999999886 44579999999999988776 8999
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC--CCHHHHHHHH
Q 016981 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW--CSTADYVKLL 306 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 306 (379)
+|++..+++|+ ++..+++++.++|||||.|++.++..+.... ...+......+.... ....+.+ ...+.+.+++
T Consensus 116 ~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~w~~p~~~~~~~~l 191 (299)
T 3g5t_A 116 MITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPD-YPEFDDLMIEVPYGK--QGLGPYWEQPGRSRLRNML 191 (299)
T ss_dssp EEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTT-CGGGTTHHHHHHHCT--TTTGGGSCTTHHHHHHTTT
T ss_pred EEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccC-cHHHHHHHHHhccCc--ccccchhhchhhHHHHHhh
Confidence 99999999999 9999999999999999999996654322111 112222222222110 0111112 2566779999
Q ss_pred HhCCC-----ceeEEEecCC
Q 016981 307 QSLSL-----EDIKAEDWSQ 321 (379)
Q Consensus 307 ~~aGF-----~~v~~~~~~~ 321 (379)
+++|| ++++...+..
T Consensus 192 ~~~gfp~~~f~~v~~~~~~~ 211 (299)
T 3g5t_A 192 KDSHLDPELFHDIQVSYFCA 211 (299)
T ss_dssp TTCCCCTTTEEEEEEEEECG
T ss_pred hccCCChHHcCcceEEEecc
Confidence 99999 6777666644
No 42
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.83 E-value=9.7e-21 Score=167.37 Aligned_cols=153 Identities=20% Similarity=0.285 Sum_probs=112.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC---CCCC-CcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPD-GQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~-~~fD~V~~~~ 234 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ .++.+...|+.++ ++.. ++||+|++..
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEECc
Confidence 789999999999999999987 78999999999999999886 3577888887766 4444 4599999999
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhc--cCCCCCCCHHHHHHHHHhCCCc
Q 016981 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA--YYLPAWCSTADYVKLLQSLSLE 312 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGF~ 312 (379)
+++ ..++..++++++++|||||++++.++........ .....+....+...... .....+++.+++.++|+++||+
T Consensus 125 ~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 202 (227)
T 3e8s_A 125 ALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLR 202 (227)
T ss_dssp CCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEE
T ss_pred hhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCe
Confidence 999 7899999999999999999999998654432211 00000000000000000 0001245899999999999999
Q ss_pred eeEEEecCC
Q 016981 313 DIKAEDWSQ 321 (379)
Q Consensus 313 ~v~~~~~~~ 321 (379)
++++.....
T Consensus 203 ~~~~~~~~~ 211 (227)
T 3e8s_A 203 LVSLQEPQH 211 (227)
T ss_dssp EEEEECCCC
T ss_pred EEEEecCCC
Confidence 999876443
No 43
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.82 E-value=7.4e-20 Score=161.12 Aligned_cols=148 Identities=16% Similarity=0.136 Sum_probs=111.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEccCCCCCCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVGDALQQPFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+++. ++.+..+|+...+.++++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 7899999999999999999875 3699999999999999999987776643 8999999998777777899999999
Q ss_pred cccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHH----HHHH
Q 016981 234 ESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV----KLLQ 307 (379)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ 307 (379)
.+++|++++ ..+++++.++|||||.+++....... ..+. ...............++++++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYN-----VKFA----NLPAGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHH-----HHTC---------------CCSCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccc-----hhhc----ccccccccccccccccCHHHHHHHHHHHHH
Confidence 999999866 89999999999999977766531000 0000 0000000000111235899998 8999
Q ss_pred hCCCceeE
Q 016981 308 SLSLEDIK 315 (379)
Q Consensus 308 ~aGF~~v~ 315 (379)
++||+++.
T Consensus 181 ~~Gf~v~~ 188 (217)
T 3jwh_A 181 RFAYNVQF 188 (217)
T ss_dssp HSSEEEEE
T ss_pred HcCceEEE
Confidence 99998654
No 44
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.82 E-value=1.4e-18 Score=165.43 Aligned_cols=163 Identities=20% Similarity=0.253 Sum_probs=128.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
....+++.++... ..+|||+|||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++|..+|+.
T Consensus 190 ~~~~l~~~~~~~~-----~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~- 262 (369)
T 3gwz_A 190 EAGQVAAAYDFSG-----AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF- 262 (369)
T ss_dssp HHHHHHHHSCCTT-----CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-
T ss_pred hHHHHHHhCCCcc-----CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-
Confidence 3456666665544 7899999999999999999987 679999999 9999999999998888789999999998
Q ss_pred CCCCCCcccEEEeccccCCCCCHH--HHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
.+++. .||+|++..+++++++.. ++|++++++|||||++++.+...+...... .....+....... ...+
T Consensus 263 ~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~d~~~~~~~~---g~~~ 334 (369)
T 3gwz_A 263 ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS----TLFVDLLLLVLVG---GAER 334 (369)
T ss_dssp TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH----HHHHHHHHHHHHS---CCCB
T ss_pred CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc----hhHhhHHHHhhcC---CccC
Confidence 55555 899999999999998875 799999999999999999997655432111 1111111111111 1245
Q ss_pred CHHHHHHHHHhCCCceeEEEe
Q 016981 298 STADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 298 ~~~~~~~~l~~aGF~~v~~~~ 318 (379)
+.++|.++|+++||+++++..
T Consensus 335 t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 335 SESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp CHHHHHHHHHTTTEEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEEE
Confidence 899999999999999999865
No 45
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=1.6e-19 Score=163.16 Aligned_cols=157 Identities=19% Similarity=0.190 Sum_probs=119.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
....+++.+...+ +.+|||+|||+|.++..+++.+ +.+|+|+|+|+.|++.++++. +++.+..+|+.+
T Consensus 21 ~~~~l~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~ 89 (259)
T 2p35_A 21 PARDLLAQVPLER-----VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLAT 89 (259)
T ss_dssp HHHHHHTTCCCSC-----CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTT
T ss_pred HHHHHHHhcCCCC-----CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhh
Confidence 3445566555443 7899999999999999999987 679999999999999999872 579999999998
Q ss_pred CCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHH--Hhhc-----cC
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK--ICDA-----YY 292 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~ 292 (379)
++ ++++||+|++..+++|++++..++++++++|||||++++..+.... ............. .... ..
T Consensus 90 ~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
T 2p35_A 90 WK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQ-----EPTHIAMHETADGGPWKDAFSGGGLR 163 (259)
T ss_dssp CC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTT-----SHHHHHHHHHHHHSTTGGGC------
T ss_pred cC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCC-----cHHHHHHHHHhcCcchHHHhcccccc
Confidence 88 6789999999999999999999999999999999999998853221 0111111111111 0000 01
Q ss_pred CCCCCCHHHHHHHHHhCCCcee
Q 016981 293 LPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 293 ~~~~~~~~~~~~~l~~aGF~~v 314 (379)
...+.+.+++.++|+++||++.
T Consensus 164 ~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 164 RKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp -CCCCCHHHHHHHHGGGEEEEE
T ss_pred ccCCCCHHHHHHHHHhcCCceE
Confidence 1246799999999999999743
No 46
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.82 E-value=1.2e-19 Score=164.79 Aligned_cols=159 Identities=14% Similarity=0.153 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHHccCchhHHHhhhccccccccCCCCCCC--cchHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCc
Q 016981 91 AARELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVS--VSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCG 168 (379)
Q Consensus 91 ~~~~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcG 168 (379)
...++...+..+|+.....|+..|+++++.+ +. .+.. .-.+......++..-+..+++.+ +.+|||||||
T Consensus 61 ~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~--~~-p~~~l~~fpy~~~~~~l~~~E~~la~l~~-----g~rVLDIGcG 132 (298)
T 3fpf_A 61 EMNHALSLIRKFYVNLGMKLEMEKAQEVIES--DS-PWETLRSFYFYPRYLELLKNEAALGRFRR-----GERAVFIGGG 132 (298)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--SS-HHHHHHTSTTHHHHHHHHHHHHHHTTCCT-----TCEEEEECCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CC-hHHhhccCCCcccHHHHHHHHHHHcCCCC-----cCEEEEECCC
Confidence 4678889999999999999999999877544 10 0000 00011223444545455666655 9999999999
Q ss_pred ccHHH-HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCCHHHHHH
Q 016981 169 IGGSS-RYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVS 247 (379)
Q Consensus 169 tG~~~-~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~ 247 (379)
+|.++ ..+++..+++|+|+|+|+.|++.|+++++..|+ .+++|.++|+.+++ +++||+|++... .+++.++++
T Consensus 133 ~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~ 206 (298)
T 3fpf_A 133 PLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFR 206 (298)
T ss_dssp SSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHH
T ss_pred ccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHH
Confidence 98765 445554488999999999999999999999888 79999999998875 689999997654 578899999
Q ss_pred HHHHhcCCCCEEEEEe
Q 016981 248 ELARVTAPAGTIIIVT 263 (379)
Q Consensus 248 ~~~r~LkpgG~l~i~~ 263 (379)
++.++|||||+|++.+
T Consensus 207 el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 207 NIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHHCCTTCEEEEEE
T ss_pred HHHHHcCCCcEEEEEc
Confidence 9999999999999976
No 47
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.82 E-value=6.7e-20 Score=154.99 Aligned_cols=132 Identities=23% Similarity=0.328 Sum_probs=112.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++ .+++.+..+| .++++++||+|++..+++|
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 7899999999999999999985 4999999999999999987 2589999998 6677889999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEe
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
++++..+++++.++|||||++++.++.......... ....++.+++.++|+ ||++++...
T Consensus 88 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 88 MDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPP------------------LSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC------------------GGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred ccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCch------------------HhhhcCHHHHHHHHh--CcEEEEccC
Confidence 999999999999999999999999876544221110 012358999999999 999998876
Q ss_pred cC
Q 016981 319 WS 320 (379)
Q Consensus 319 ~~ 320 (379)
+.
T Consensus 148 ~~ 149 (170)
T 3i9f_A 148 PT 149 (170)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 48
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.82 E-value=4.2e-19 Score=166.66 Aligned_cols=151 Identities=19% Similarity=0.128 Sum_probs=120.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
+..+|||+|||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++|..+|+. .+++. +||+|++.+++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 36899999999999999999987 679999999 9999999999998888789999999997 45554 89999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcee
Q 016981 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 314 (379)
+|+++. .++|++++++|||||++++.+...+.. . . .... .+....... ...++.++|.++|+++||+++
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~--~-~~~~-d~~~~~~~~---~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--H--A-GTGM-DLRMLTYFG---GKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-------C-CHHH-HHHHHHHHS---CCCCCHHHHHHHHHHTTEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--C--c-cHHH-HHHHHhhCC---CCCCCHHHHHHHHHHCCCEEE
Confidence 999886 899999999999999999999765543 1 1 1111 111111111 124589999999999999999
Q ss_pred EEEecC
Q 016981 315 KAEDWS 320 (379)
Q Consensus 315 ~~~~~~ 320 (379)
++....
T Consensus 317 ~~~~~~ 322 (332)
T 3i53_A 317 AAHPIS 322 (332)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 887553
No 49
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.82 E-value=4.2e-19 Score=163.65 Aligned_cols=148 Identities=15% Similarity=0.193 Sum_probs=108.3
Q ss_pred CCCEEEEeCCcccHHHHHH----HHHc-CCE--EEEEeCCHHHHHHHHHHHHHc-CCCCCeEEE--EccCCCCC------
Q 016981 158 RPKNVVDVGCGIGGSSRYL----AKKF-GAK--CQGITLSPVQAQRANALAAAR-GLADKVSFQ--VGDALQQP------ 221 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l----~~~~-~~~--v~gvD~s~~~~~~a~~~~~~~-~~~~~i~~~--~~d~~~~~------ 221 (379)
++.+|||||||+|.++..+ +.++ +.. ++|+|+|+.|++.|++++... ++ .++.+. .+++++++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhccc
Confidence 4789999999999866543 3333 454 499999999999999998754 33 455554 45554432
Q ss_pred CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC---CCCCCC
Q 016981 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY---LPAWCS 298 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 298 (379)
+++++||+|++..+++|++|+.++|++++++|||||++++....... . ...++........ ...+++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~ 200 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS---------G-WDKLWKKYGSRFPQDDLCQYIT 200 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS---------H-HHHHHHHHGGGSCCCTTCCCCC
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc---------c-HHHHHHHHHHhccCCCcccCCC
Confidence 56789999999999999999999999999999999999998654211 1 1122222222111 124678
Q ss_pred HHHHHHHHHhCCCceeEE
Q 016981 299 TADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 299 ~~~~~~~l~~aGF~~v~~ 316 (379)
++++.++|+++||+++..
T Consensus 201 ~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 201 SDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceEEE
Confidence 999999999999998764
No 50
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.81 E-value=2.4e-19 Score=158.14 Aligned_cols=138 Identities=21% Similarity=0.219 Sum_probs=111.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..++.. +|+|+|+.+++.++++ ++.+..+|+.++++++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 679999999999999887653 9999999999999875 588999999998888889999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhc---cCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA---YYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
++++..+++++.++|||||.+++.+..... . ........... .....+++.+++.++|+++||++++
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDRES---------F-LGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECSSS---------H-HHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCCcc---------H-HHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 999999999999999999999998864321 1 11112111111 1112457999999999999999988
Q ss_pred EEec
Q 016981 316 AEDW 319 (379)
Q Consensus 316 ~~~~ 319 (379)
+...
T Consensus 185 ~~~~ 188 (219)
T 1vlm_A 185 VVQT 188 (219)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 7654
No 51
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.81 E-value=5.9e-19 Score=167.46 Aligned_cols=167 Identities=22% Similarity=0.268 Sum_probs=130.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
.....+++.++... +.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++++++++..+|+.
T Consensus 177 ~~~~~l~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 250 (359)
T 1x19_A 177 FAIQLLLEEAKLDG-----VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIY 250 (359)
T ss_dssp HHHHHHHHHCCCTT-----CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred hhHHHHHHhcCCCC-----CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccc
Confidence 34456666666544 7899999999999999999987 679999999 9999999999998888778999999998
Q ss_pred CCCCCCCcccEEEeccccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHh--h-ccCC
Q 016981 219 QQPFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC--D-AYYL 293 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 293 (379)
+.++++ +|+|++..+++|+++ ...++++++++|||||++++.++..+.. . ...+ ...+.... . ....
T Consensus 251 ~~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~-~~~~----~~~~~~~~~~~~g~~~ 322 (359)
T 1x19_A 251 KESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-E-NPNF----DYLSHYILGAGMPFSV 322 (359)
T ss_dssp TSCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-T-SCCH----HHHHHHGGGGGSSCCC
T ss_pred cCCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-C-CchH----HHHHHHHHhcCCCCcc
Confidence 877654 399999999999987 6889999999999999999999765543 1 1111 11111111 1 1111
Q ss_pred CCCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 294 PAWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 294 ~~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
..+++.++|.++|+++||+++++..+.
T Consensus 323 ~~~~t~~e~~~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 323 LGFKEQARYKEILESLGYKDVTMVRKY 349 (359)
T ss_dssp CCCCCGGGHHHHHHHHTCEEEEEEEET
T ss_pred cCCCCHHHHHHHHHHCCCceEEEEecC
Confidence 234799999999999999999887654
No 52
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.81 E-value=2e-20 Score=181.12 Aligned_cols=163 Identities=16% Similarity=0.213 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EE
Q 016981 134 HRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKV-SF 212 (379)
Q Consensus 134 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~ 212 (379)
+........+.+++.+++.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +.+... .+
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~-----~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~ 157 (416)
T 4e2x_A 88 MREHFAMLARDFLATELTGP-----DPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFF 157 (416)
T ss_dssp HHHHHHHHHHHHHHTTTCSS-----SCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCC
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeee
Confidence 34455667777777776554 889999999999999999987 77999999999999999875 222111 12
Q ss_pred EEccCCCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHH-Hhhcc
Q 016981 213 QVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK-ICDAY 291 (379)
Q Consensus 213 ~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 291 (379)
...+...+++++++||+|++.++++|++++..++++++++|||||++++...... ..... .....
T Consensus 158 ~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~--------------~~~~~~~~~~~ 223 (416)
T 4e2x_A 158 EKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLG--------------DIVAKTSFDQI 223 (416)
T ss_dssp SHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHH--------------HHHHHTCGGGC
T ss_pred chhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChH--------------Hhhhhcchhhh
Confidence 2334444566678999999999999999999999999999999999999764311 11111 01111
Q ss_pred C--CCCCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 292 Y--LPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 292 ~--~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
+ ...+++.+++.++++++||++++++.+.
T Consensus 224 ~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 224 FDEHFFLFSATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp STTCCEECCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred hhhhhhcCCHHHHHHHHHHcCCEEEEEEEcc
Confidence 1 1135699999999999999999988764
No 53
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.81 E-value=1.1e-19 Score=160.28 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=112.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEccCCCCCCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVGDALQQPFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+++. ++.+..+|+...++++++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 7899999999999999999875 3799999999999999999987766543 8999999998888778899999999
Q ss_pred cccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHH----HHHH
Q 016981 234 ESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV----KLLQ 307 (379)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ 307 (379)
.+++|++++ ..+++++.++|||||.++......... .+........ ........++.+++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~l~~ 180 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNF-----HYGNLFEGNL----RHRDHRFEWTRKEFQTWAVKVAE 180 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGG-----CCCCT---------GGGCCTTSBCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhh-----hhcccCcccc----cccCceeeecHHHHHHHHHHHHH
Confidence 999999866 799999999999999666554321110 0000000000 001111245888998 8899
Q ss_pred hCCCceeEE
Q 016981 308 SLSLEDIKA 316 (379)
Q Consensus 308 ~aGF~~v~~ 316 (379)
++||++...
T Consensus 181 ~~Gf~v~~~ 189 (219)
T 3jwg_A 181 KYGYSVRFL 189 (219)
T ss_dssp HHTEEEEEE
T ss_pred HCCcEEEEE
Confidence 999976543
No 54
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.81 E-value=1.3e-18 Score=163.31 Aligned_cols=167 Identities=14% Similarity=0.170 Sum_probs=128.4
Q ss_pred HHHHHHHcCC--CCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 142 IEETLRFAGV--SEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 142 ~~~~l~~~~~--~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
...+++.++. .. +.+|||+|||+|.++..+++.+ +.+++++|++ .+++.|++++...++.+++++..+|+.
T Consensus 152 ~~~~~~~~~~~~~~-----~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 152 AQLIAQLVNENKIE-----PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAF 225 (335)
T ss_dssp HHHHHHHHTC--CC-----CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTT
T ss_pred HHHHHHhcccccCC-----CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccc
Confidence 4455555554 33 7899999999999999999987 6799999999 999999999988887778999999998
Q ss_pred CCCCCCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHh-hccCCCC
Q 016981 219 QQPFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC-DAYYLPA 295 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 295 (379)
+.+++++ ||+|++.++++|+++. ..++++++++|||||++++.++..+..... . .....+.... .......
T Consensus 226 ~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~ 299 (335)
T 2r3s_A 226 EVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRIT-P----PDAAAFSLVMLATTPNGD 299 (335)
T ss_dssp TSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSC-S----HHHHHHHHHHHHHSSSCC
T ss_pred cCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCC-c----hHHHHHHHHHHeeCCCCC
Confidence 8776544 9999999999999655 799999999999999999999765432111 1 1111111110 0111123
Q ss_pred CCCHHHHHHHHHhCCCceeEEEecC
Q 016981 296 WCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 296 ~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
.++.+++.++|+++||+++++....
T Consensus 300 ~~t~~~~~~ll~~aGf~~~~~~~~~ 324 (335)
T 2r3s_A 300 AYTFAEYESMFSNAGFSHSQLHSLP 324 (335)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEECCT
T ss_pred cCCHHHHHHHHHHCCCCeeeEEECC
Confidence 5689999999999999999987654
No 55
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.81 E-value=3.4e-19 Score=169.35 Aligned_cols=156 Identities=16% Similarity=0.198 Sum_probs=120.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~ 235 (379)
..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.+++++..+|+.+. |++ ++||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 7899999999999999999987 779999999 999999999998877767899999999886 465 78999999999
Q ss_pred cCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 016981 236 GEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (379)
Q Consensus 236 l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 313 (379)
++++++. ..+|++++++|||||+|++.+...+........+......... ..........++.++|.++|+++||++
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYF-TAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHH-HHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhH-HhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 9999876 5789999999999999999997654422111000000000000 011111123558999999999999998
Q ss_pred eEEE
Q 016981 314 IKAE 317 (379)
Q Consensus 314 v~~~ 317 (379)
+++.
T Consensus 337 v~~~ 340 (363)
T 3dp7_A 337 EEIQ 340 (363)
T ss_dssp SCCC
T ss_pred EEEE
Confidence 8764
No 56
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.81 E-value=7.5e-19 Score=153.85 Aligned_cols=131 Identities=21% Similarity=0.325 Sum_probs=106.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. +++.+..+|+.++++++++||+|++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 3789999999999998877 55 9999999999999999875 47899999999999888999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHH---h-hccCCCCCCCHHHHHHHHHhCC
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI---C-DAYYLPAWCSTADYVKLLQSLS 310 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~l~~aG 310 (379)
+|++++..+++++.++|||||.+++.++.... .+. ...... . ..+....+++.+++.++|+ |
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 106 EFVEDVERVLLEARRVLRPGGALVVGVLEALS---------PWA-ALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp TTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS---------HHH-HHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC---------cHH-HHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 99999999999999999999999999865332 111 111111 1 1111234679999999999 8
No 57
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.81 E-value=5.6e-19 Score=159.02 Aligned_cols=141 Identities=13% Similarity=0.186 Sum_probs=111.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH----------c------CCCCCeEEEEccCCCCCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAA----------R------GLADKVSFQVGDALQQPF 222 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~----------~------~~~~~i~~~~~d~~~~~~ 222 (379)
+.+|||+|||+|..+..|+++ |.+|+|+|+|+.|++.|+++... . ....++++.++|+.++++
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 789999999999999999987 78999999999999999876531 0 012579999999999886
Q ss_pred CC-CcccEEEeccccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCH
Q 016981 223 PD-GQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (379)
Q Consensus 223 ~~-~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
.+ ++||+|++..+++|++. ...+++++.++|||||++++.++...... ....+...++
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-------------------~~g~~~~~~~ 208 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-------------------HAGPPFYVPS 208 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-------------------CCCSSCCCCH
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-------------------CCCCCCCCCH
Confidence 54 89999999999999964 46799999999999999987665432110 0011122589
Q ss_pred HHHHHHHHhCCCceeEEEecC
Q 016981 300 ADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 300 ~~~~~~l~~aGF~~v~~~~~~ 320 (379)
+++.++++. +|+++..+.+.
T Consensus 209 ~el~~~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 209 AELKRLFGT-KCSMQCLEEVD 228 (252)
T ss_dssp HHHHHHHTT-TEEEEEEEEEE
T ss_pred HHHHHHhhC-CeEEEEEeccc
Confidence 999999987 59988876544
No 58
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.81 E-value=1.1e-19 Score=168.19 Aligned_cols=174 Identities=13% Similarity=0.106 Sum_probs=123.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCeEEEEccCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA--DKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~i~~~~~d~~ 218 (379)
.+..+++.+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+.. .++.++++|+.
T Consensus 71 ~~~~~~~~~~~~------~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 71 EAREFATRTGPV------SGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHCCC------CSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHhhCCC------CCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 444555555432 459999999999999999987 789999999999999999998875421 57999999999
Q ss_pred CCCCCCCcccEEEec-cccCCCC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCcc----ccchHHHHHHHHHhhc-
Q 016981 219 QQPFPDGQFDLVWSM-ESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE----SLQPWEQELLKKICDA- 290 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~-~~l~~~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~- 290 (379)
++++ +++||+|++. .+++|++ +...++++++++|||||+|++..+.......... .+.......+ .....
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 221 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRY-VLHVRH 221 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC--------------CCEEE
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEE-EEEEEE
Confidence 9887 6899999865 5667765 3589999999999999999998865432100000 0000000000 00000
Q ss_pred ------------------------cCCCCCCCHHHHHHHHHhCCCceeEEEecCCCc
Q 016981 291 ------------------------YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (379)
Q Consensus 291 ------------------------~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~ 323 (379)
.....+++++++.++|+++||+++.+..+..+-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g 278 (299)
T 3g2m_A 222 LPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGG 278 (299)
T ss_dssp EEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTS
T ss_pred eccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCC
Confidence 000024699999999999999999998886543
No 59
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.80 E-value=1.1e-18 Score=155.91 Aligned_cols=152 Identities=20% Similarity=0.339 Sum_probs=115.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|+++... .++.+..+|+.++++++++||+|++..+++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLALH 118 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEecccc
Confidence 789999999999999999987 56 999999999999999886532 379999999999888888999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCcc------------ccchH------HHHHHHHHhhccCCCCCCCH
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE------------SLQPW------EQELLKKICDAYYLPAWCST 299 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~------------~~~~~------~~~~~~~~~~~~~~~~~~~~ 299 (379)
|++++..++++++++|||||++++............. ..... ...++.. ... ..+++.
T Consensus 119 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~t~ 194 (243)
T 3bkw_A 119 YVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAK---GVV-KHHRTV 194 (243)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHH---SCC-EEECCH
T ss_pred ccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccC---ceE-EEeccH
Confidence 9999999999999999999999998742110000000 00000 0000110 110 113589
Q ss_pred HHHHHHHHhCCCceeEEEec
Q 016981 300 ADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 300 ~~~~~~l~~aGF~~v~~~~~ 319 (379)
+++.++|+++||+++++...
T Consensus 195 ~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 195 GTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCEeeeeccC
Confidence 99999999999999988754
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.80 E-value=2.6e-20 Score=169.13 Aligned_cols=148 Identities=9% Similarity=-0.010 Sum_probs=109.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----------------------------CCC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL----------------------------ADK 209 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----------------------------~~~ 209 (379)
++.+|||||||+|.++..++.....+|+|+|+|+.|++.|+++++.... ..+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4789999999999888777665324799999999999999987654310 012
Q ss_pred eE-EEEccCCCC-CC---CCCcccEEEeccccCCC----CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHH
Q 016981 210 VS-FQVGDALQQ-PF---PDGQFDLVWSMESGEHM----PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWE 280 (379)
Q Consensus 210 i~-~~~~d~~~~-~~---~~~~fD~V~~~~~l~~~----~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 280 (379)
+. +..+|+.+. |+ ..++||+|+++.+++|+ ++...++++++++|||||+|++++...... +.
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~------~~--- 205 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS------YM--- 205 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE------EE---
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc------ce---
Confidence 33 889999874 43 25789999999999986 344789999999999999999997543211 00
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 281 QELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
..........++.+++.++|+++||++++...+.
T Consensus 206 ------~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 ------VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp ------ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ------eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 0000011124589999999999999999988764
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.80 E-value=3.4e-19 Score=161.58 Aligned_cols=100 Identities=23% Similarity=0.348 Sum_probs=89.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc-ccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~-~l~ 237 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. .++.+.++|+.++++ +++||+|++.. +++
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIG 122 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCC-SCCEEEEEECTTGGG
T ss_pred CCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCc-cCCcCEEEEcCchhh
Confidence 689999999999999999987 679999999999999999874 379999999999887 68999999998 999
Q ss_pred CCC---CHHHHHHHHHHhcCCCCEEEEEeccC
Q 016981 238 HMP---DKSKFVSELARVTAPAGTIIIVTWCH 266 (379)
Q Consensus 238 ~~~---~~~~~l~~~~r~LkpgG~l~i~~~~~ 266 (379)
|++ +...++++++++|||||++++..+..
T Consensus 123 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 123 HLAGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp GSCHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 996 45688999999999999999976543
No 62
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.80 E-value=2.2e-18 Score=152.44 Aligned_cols=146 Identities=18% Similarity=0.249 Sum_probs=116.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC--CCCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QPFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~fD~V~~~~~ 235 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ..+..+|+.+ .++++++||+|++..+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 3789999999999999999988 789999999999999988642 3688999876 5677789999999999
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC----------CCCCCCHHHHHHH
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY----------LPAWCSTADYVKL 305 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 305 (379)
++|++++..+++++.++|||||.+++....... . ..........+. ...+++.+++.++
T Consensus 103 l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQNGVILASIPNVSH-------I----SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTS-------H----HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcch-------H----HHHHHHhcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999999999999999999998754321 0 011111111111 1145799999999
Q ss_pred HHhCCCceeEEEecCCCc
Q 016981 306 LQSLSLEDIKAEDWSQNV 323 (379)
Q Consensus 306 l~~aGF~~v~~~~~~~~~ 323 (379)
|+++||+++.+..+....
T Consensus 172 l~~~Gf~~~~~~~~~~~~ 189 (230)
T 3cc8_A 172 FLKAGYSISKVDRVYVDH 189 (230)
T ss_dssp HHHTTEEEEEEEEEECCC
T ss_pred HHHcCCeEEEEEecccCh
Confidence 999999999988776654
No 63
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.80 E-value=5.4e-19 Score=158.16 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=92.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc-cc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~-~l 236 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. ++.+.++|+.+++++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCccc
Confidence 3789999999999999999987 78999999999999999999887664 799999999988876 8899999998 99
Q ss_pred CCC---CCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 237 EHM---PDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 237 ~~~---~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+ .+...++++++++|||||++++...
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999 4568999999999999999998653
No 64
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.80 E-value=1.3e-18 Score=150.68 Aligned_cols=139 Identities=22% Similarity=0.336 Sum_probs=115.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++.+..+|+.++++ +++||+|++..+++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 779999999999999999987 78999999999999999999988776 479999999999887 789999999999999
Q ss_pred CC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 239 ~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
++ +...+++++.++|||||++++.+.......+.. ......++.+++.+++++ |+++..
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT-----------------VGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC-----------------SCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC-----------------CCCCCccCHHHHHHHhcC--CeEEEe
Confidence 97 779999999999999999888775433211100 011124578899999986 998887
Q ss_pred Eec
Q 016981 317 EDW 319 (379)
Q Consensus 317 ~~~ 319 (379)
...
T Consensus 171 ~~~ 173 (199)
T 2xvm_A 171 NED 173 (199)
T ss_dssp ECC
T ss_pred ccc
Confidence 543
No 65
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=2.6e-18 Score=163.82 Aligned_cols=165 Identities=22% Similarity=0.226 Sum_probs=123.5
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 221 (379)
..+++.++... +.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.+++++..+|+.+ +
T Consensus 172 ~~~~~~~~~~~-----~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 244 (374)
T 1qzz_A 172 EAPADAYDWSA-----VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P 244 (374)
T ss_dssp HHHHHTSCCTT-----CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred HHHHHhCCCCC-----CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c
Confidence 34455544433 7899999999999999999987 679999999 99999999999988887789999999876 4
Q ss_pred CCCCcccEEEeccccCCCCCHH--HHHHHHHHhcCCCCEEEEEec--cCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016981 222 FPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTW--CHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
++. .||+|++..+++|+++.. .++++++++|||||++++.++ ..+... ...+.... ......... ...+
T Consensus 245 ~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~-~~~~~~~~~---~~~~ 317 (374)
T 1qzz_A 245 LPV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGA--DRFFSTLL-DLRMLTFMG---GRVR 317 (374)
T ss_dssp CSC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHH-HHHHHHHHS---CCCC
T ss_pred CCC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCC--Ccchhhhc-chHHHHhCC---CcCC
Confidence 443 499999999999998774 899999999999999999987 432210 11111111 111001111 2356
Q ss_pred CHHHHHHHHHhCCCceeEEEecCC
Q 016981 298 STADYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 298 ~~~~~~~~l~~aGF~~v~~~~~~~ 321 (379)
+.+++.++|+++||+++++.....
T Consensus 318 ~~~~~~~ll~~aGf~~~~~~~~~~ 341 (374)
T 1qzz_A 318 TRDEVVDLAGSAGLALASERTSGS 341 (374)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEECC
T ss_pred CHHHHHHHHHHCCCceEEEEECCC
Confidence 999999999999999998876643
No 66
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.79 E-value=4.9e-18 Score=150.16 Aligned_cols=104 Identities=31% Similarity=0.457 Sum_probs=93.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccc--c
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES--G 236 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~--l 236 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .++.+..+|+.++++++++||+|++..+ +
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 789999999999999999987 5699999999999999999988765 5899999999998887889999999999 5
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++..+...++++++++|||||++++.+..
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 66667789999999999999999998754
No 67
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.78 E-value=1.3e-18 Score=151.30 Aligned_cols=143 Identities=17% Similarity=0.213 Sum_probs=114.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. ++.+..+|+.+.++++++||+|++.. .|
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~--~~ 104 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIF--CH 104 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEEC--CC
T ss_pred C-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEh--hc
Confidence 6 9999999999999999987 78999999999999999999887764 79999999999888888999999854 44
Q ss_pred C--CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 239 M--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 239 ~--~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
+ .+...+++++.++|||||.+++.++........ .........+++++++.++|+ ||+++..
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN--------------TGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT--------------SCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC--------------CCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 4 356899999999999999999998764432100 000000113569999999999 9999998
Q ss_pred EecCCCc
Q 016981 317 EDWSQNV 323 (379)
Q Consensus 317 ~~~~~~~ 323 (379)
+....+.
T Consensus 169 ~~~~~~~ 175 (202)
T 2kw5_A 169 NNLERNL 175 (202)
T ss_dssp EEEEEEC
T ss_pred EEEEeec
Confidence 7765543
No 68
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.78 E-value=3.6e-18 Score=161.32 Aligned_cols=160 Identities=15% Similarity=0.104 Sum_probs=117.7
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
...+++.++... +.+|||||||+|.++..+++.+ +.+++++|++ .++. +++.+..+..+++++..+|+. .
T Consensus 173 ~~~~~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~ 243 (348)
T 3lst_A 173 HLILARAGDFPA-----TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-R 243 (348)
T ss_dssp HHHHHHHSCCCS-----SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-T
T ss_pred HHHHHHhCCccC-----CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-C
Confidence 455666666554 7899999999999999999987 6789999994 4444 333333345568999999996 4
Q ss_pred CCCCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016981 221 PFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
+++ +||+|++..+++|+++. .++|++++++|||||+|++.+...+.... .... ................+
T Consensus 244 ~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~--~~~~----~~~d~~~~~~~~~~~~t 315 (348)
T 3lst_A 244 EVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGND--AHQS----KEMDFMMLAARTGQERT 315 (348)
T ss_dssp CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSS--CCHH----HHHHHHHHHTTSCCCCB
T ss_pred CCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchh----hhcChhhhhcCCCcCCC
Confidence 444 89999999999999987 69999999999999999999976544311 1111 11111111111123458
Q ss_pred HHHHHHHHHhCCCceeEEEe
Q 016981 299 TADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 299 ~~~~~~~l~~aGF~~v~~~~ 318 (379)
.++|.++|+++||+++++..
T Consensus 316 ~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 316 AAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 99999999999999998875
No 69
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.77 E-value=5.1e-19 Score=162.82 Aligned_cols=149 Identities=13% Similarity=0.062 Sum_probs=109.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-----------------CCCC------------
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-----------------GLAD------------ 208 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----------------~~~~------------ 208 (379)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++++.. +...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 37899999999999655454434679999999999999998865421 1000
Q ss_pred CeEEEEccCCC-CCC-----CCCcccEEEeccccCC----CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccch
Q 016981 209 KVSFQVGDALQ-QPF-----PDGQFDLVWSMESGEH----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQP 278 (379)
Q Consensus 209 ~i~~~~~d~~~-~~~-----~~~~fD~V~~~~~l~~----~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 278 (379)
.+.++.+|+.+ +|+ ++++||+|+++.+++| ++++..+|++++++|||||+|++.......... .
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~----~-- 224 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYL----A-- 224 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEE----E--
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEE----c--
Confidence 15677789887 553 3467999999999999 557899999999999999999998643221100 0
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCC
Q 016981 279 WEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 321 (379)
........+++.+++.++|+++||+++.+..+..
T Consensus 225 ---------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 225 ---------GEARLTVVPVSEEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp ---------TTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred ---------CCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeec
Confidence 0000112356899999999999999998876653
No 70
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.77 E-value=3.3e-19 Score=164.31 Aligned_cols=152 Identities=14% Similarity=0.234 Sum_probs=111.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC-------------------------------
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG------------------------------- 205 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~------------------------------- 205 (379)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 37899999999999999999987 6799999999999999999866543
Q ss_pred --------------------------CCCCeEEEEccCCCCC-----CCCCcccEEEeccccCCCC------CHHHHHHH
Q 016981 206 --------------------------LADKVSFQVGDALQQP-----FPDGQFDLVWSMESGEHMP------DKSKFVSE 248 (379)
Q Consensus 206 --------------------------~~~~i~~~~~d~~~~~-----~~~~~fD~V~~~~~l~~~~------~~~~~l~~ 248 (379)
.+.++.|.++|+...+ +.+++||+|++..+++|+. +..+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 2258999999997654 5678999999999998774 66899999
Q ss_pred HHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHh--CCCceeEEEe
Q 016981 249 LARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS--LSLEDIKAED 318 (379)
Q Consensus 249 ~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGF~~v~~~~ 318 (379)
++++|||||+|++......... ....+.......+ ... .+.++++.++|.+ +||+.+++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~-~~~~~~~~~~~~~----~~~----~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYG-KRKTLTETIYKNY----YRI----QLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHH-TTTTSCHHHHHHH----HHC----CCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCchhhh-hhhcccHHHHhhh----hcE----EEcHHHHHHHHHhcCCCceEEEEec
Confidence 9999999999998642111000 0011111111111 111 1247899999999 9999887743
No 71
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.77 E-value=4.1e-18 Score=156.88 Aligned_cols=105 Identities=25% Similarity=0.304 Sum_probs=93.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCeEEEEccCCCCC---CCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA---DKVSFQVGDALQQP---FPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~i~~~~~d~~~~~---~~~~~fD~V~~ 232 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. .++.+..+|+..++ +++++||+|++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 789999999999999999987 779999999999999999887543321 36889999998877 77899999999
Q ss_pred c-cccCCCCC-------HHHHHHHHHHhcCCCCEEEEEec
Q 016981 233 M-ESGEHMPD-------KSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~-~~l~~~~~-------~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
. .+++|+++ +..++++++++|||||++++...
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8 89999999 89999999999999999998864
No 72
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.77 E-value=4.5e-18 Score=160.86 Aligned_cols=153 Identities=17% Similarity=0.181 Sum_probs=119.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-CCCCcccEEEecccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSMESG 236 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~V~~~~~l 236 (379)
+.+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++++...++.+++++..+|+.+.+ +.++.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 7899999999999999999987 679999999 8899999999998887778999999998875 234679999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcee
Q 016981 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 314 (379)
+|+++. ..++++++++|||||++++.+...+..... ............. .......++.++|.++|+++||+++
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVT--PALSADFSLHMMV--NTNHGELHPTPWIAGVVRDAGLAVG 334 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSS--SHHHHHHHHHHHH--HSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC--CchHHHhhHHHHh--hCCCCCcCCHHHHHHHHHHCCCcee
Confidence 999876 899999999999999999999765543211 1111111111111 1111124589999999999999998
Q ss_pred EE
Q 016981 315 KA 316 (379)
Q Consensus 315 ~~ 316 (379)
+.
T Consensus 335 ~~ 336 (352)
T 3mcz_A 335 ER 336 (352)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 73
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.77 E-value=5.1e-18 Score=151.66 Aligned_cols=100 Identities=24% Similarity=0.350 Sum_probs=89.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc-ccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~-~l~ 237 (379)
+.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++....+ .++.+..+|+.+.+++ ++||+|++.. +++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 689999999999999999886 699999999999999999988765 4799999999988775 8899999986 999
Q ss_pred CCC---CHHHHHHHHHHhcCCCCEEEEEe
Q 016981 238 HMP---DKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~~~---~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+. +...+++++.++|||||++++..
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 984 45789999999999999999854
No 74
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.77 E-value=7.5e-18 Score=158.21 Aligned_cols=163 Identities=17% Similarity=0.167 Sum_probs=123.8
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
...+++.++.. + .+|||+|||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.+++++..+|+.+
T Consensus 157 ~~~~~~~~~~~-----~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 228 (334)
T 2ip2_A 157 FHEIPRLLDFR-----G-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ- 228 (334)
T ss_dssp HHHHHHHSCCT-----T-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-
T ss_pred HHHHHHhCCCC-----C-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-
Confidence 44555554432 3 799999999999999999987 679999999 99999999998776666789999999987
Q ss_pred CCCCCcccEEEeccccCCCCCHH--HHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
+++ ++||+|++..+++|+++.. .++++++++|||||++++.+...+.... ...... ..+....... ...++
T Consensus 229 ~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~-~~~~~~~~~~---~~~~t 301 (334)
T 2ip2_A 229 EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSVL-WDVHLFMACA---GRHRT 301 (334)
T ss_dssp CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHHH-HHHHHHHHHS---CCCCB
T ss_pred CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhHH-hhhHhHhhCC---CcCCC
Confidence 555 6799999999999998765 9999999999999999999876543211 111111 1111111111 12358
Q ss_pred HHHHHHHHHhCCCceeEEEec
Q 016981 299 TADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 299 ~~~~~~~l~~aGF~~v~~~~~ 319 (379)
.++|.++|+++||+++++...
T Consensus 302 ~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 302 TEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHCCCceeEEEEC
Confidence 999999999999999988654
No 75
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.77 E-value=1.1e-17 Score=158.78 Aligned_cols=164 Identities=18% Similarity=0.211 Sum_probs=124.7
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 221 (379)
..+++.++... +.+|||+|||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.+++.+..+|+.+ +
T Consensus 173 ~~l~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 245 (360)
T 1tw3_A 173 DAPAAAYDWTN-----VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P 245 (360)
T ss_dssp HHHHHHSCCTT-----CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred HHHHHhCCCcc-----CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C
Confidence 34455555443 7899999999999999999987 679999999 99999999999988887789999999876 3
Q ss_pred CCCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEEecc-CCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016981 222 FPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWC-HRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
++. .||+|++..+++|+++. ..++++++++|||||++++.+.. .++.. ...+.... ......... ...++
T Consensus 246 ~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~-~~~~~~~~~---~~~~t 318 (360)
T 1tw3_A 246 LPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENS--FNEQFTEL-DLRMLVFLG---GALRT 318 (360)
T ss_dssp CSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGC--CSHHHHHH-HHHHHHHHS---CCCCB
T ss_pred CCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCC--Ccchhhhc-cHHHhhhcC---CcCCC
Confidence 443 49999999999999876 58999999999999999999876 32211 01111111 111101111 23568
Q ss_pred HHHHHHHHHhCCCceeEEEecC
Q 016981 299 TADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 299 ~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
.++|.++|+++||+++++....
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQLP 340 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEeCC
Confidence 9999999999999999887654
No 76
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.77 E-value=1.3e-18 Score=151.86 Aligned_cols=156 Identities=21% Similarity=0.251 Sum_probs=116.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..++...+.+|+|+|+|+.+++.|++++...+ .++.+..+|+.++++++++||+|++..+++|
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 78999999999998544444447899999999999999999988765 4789999999999888899999999999999
Q ss_pred C--CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCc-cccchHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHhCCCcee
Q 016981 239 M--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSE-ESLQPWEQELLKKICDAY-YLPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 239 ~--~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGF~~v 314 (379)
+ .++..++++++++|||||++++.++...+..... ..+... .+....... ....+++.+++.++++++||...
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEG---EFLQLERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETT---EEEECC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccc---cceeccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 9 5678999999999999999999987654422110 000000 000000000 01135689999999999999876
Q ss_pred EEEec
Q 016981 315 KAEDW 319 (379)
Q Consensus 315 ~~~~~ 319 (379)
+...+
T Consensus 179 ~~~~~ 183 (209)
T 2p8j_A 179 EDRVV 183 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 65433
No 77
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.77 E-value=6.4e-18 Score=150.61 Aligned_cols=101 Identities=22% Similarity=0.374 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEe-ccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS-MESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~-~~~l~ 237 (379)
+.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++. +++.+..+|+.++++ +++||+|++ ..+++
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVG 112 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-SSCEEEEEECTTGGG
T ss_pred CCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-CCCCcEEEEcCchHh
Confidence 7899999999999999999884 59999999999999998864 468999999998876 688999995 55999
Q ss_pred CCCC---HHHHHHHHHHhcCCCCEEEEEeccCC
Q 016981 238 HMPD---KSKFVSELARVTAPAGTIIIVTWCHR 267 (379)
Q Consensus 238 ~~~~---~~~~l~~~~r~LkpgG~l~i~~~~~~ 267 (379)
|+.+ ...++++++++|||||++++.++...
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 113 YLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp GCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 9954 47899999999999999999876543
No 78
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=5.2e-18 Score=152.03 Aligned_cols=155 Identities=13% Similarity=0.159 Sum_probs=116.1
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCC-----CcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD-----GQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~fD~V~~ 232 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..++.+.++|+.+.+... ..||+|++
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEEEE
Confidence 4789999999999999999998 4599999999999999998762 248999999998864321 24999999
Q ss_pred ccccCCCC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHH------HHHHHHhhccCCCCCCCHHHHHH
Q 016981 233 MESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQ------ELLKKICDAYYLPAWCSTADYVK 304 (379)
Q Consensus 233 ~~~l~~~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
..+++|++ +...++++++++|||||++++.++..... ..+..... ..+.........+..++.+++.+
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCI----DFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIEL 206 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHH----HHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHH
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcccc----HHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHH
Confidence 99999998 78999999999999999999998754321 00000000 00111112222334568999999
Q ss_pred HHHhCCCceeEEEecCCCc
Q 016981 305 LLQSLSLEDIKAEDWSQNV 323 (379)
Q Consensus 305 ~l~~aGF~~v~~~~~~~~~ 323 (379)
++ +||+++.........
T Consensus 207 ~~--aGf~~~~~~~~~~~~ 223 (245)
T 3ggd_A 207 YF--PDFEILSQGEGLFQS 223 (245)
T ss_dssp HC--TTEEEEEEECCBCCC
T ss_pred Hh--CCCEEEeccccccce
Confidence 99 999999887665443
No 79
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=4.9e-17 Score=141.64 Aligned_cols=136 Identities=13% Similarity=0.044 Sum_probs=111.4
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 221 (379)
..++..+...+ +.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++++..++ +++++..+|+.+..
T Consensus 30 ~~~l~~l~~~~-----~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 30 AVTLSKLRLQD-----DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHHHHTTCCT-----TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTC
T ss_pred HHHHHHcCCCC-----CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhh
Confidence 44555555554 8899999999999999999986 47999999999999999999998887 68999999997654
Q ss_pred CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016981 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
...++||+|++..+++ +...+++++.++|||||++++..... .+.++
T Consensus 104 ~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------------~~~~~ 150 (204)
T 3e05_A 104 DDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------------DTLTK 150 (204)
T ss_dssp TTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH------------------------------HHHHH
T ss_pred hcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc------------------------------ccHHH
Confidence 3347899999988775 77899999999999999999976321 03567
Q ss_pred HHHHHHhCCCceeEEEe
Q 016981 302 YVKLLQSLSLEDIKAED 318 (379)
Q Consensus 302 ~~~~l~~aGF~~v~~~~ 318 (379)
+.++++++|| .++...
T Consensus 151 ~~~~l~~~g~-~~~~~~ 166 (204)
T 3e05_A 151 AVEFLEDHGY-MVEVAC 166 (204)
T ss_dssp HHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHCCC-ceeEEE
Confidence 8889999999 555443
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.76 E-value=2.9e-19 Score=159.58 Aligned_cols=104 Identities=20% Similarity=0.166 Sum_probs=89.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEe---
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWS--- 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~--- 232 (379)
++.+|||||||+|..+..+++..+.+|+|||+|+.+++.|+++....+ .++.++.+|+... ++++++||.|+.
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEeee
Confidence 388999999999999999988766789999999999999999987765 4788899987664 577889999974
Q ss_pred --ccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 233 --MESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 --~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
...++|+.++..++++++|+|||||+|.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5567788889999999999999999998754
No 81
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.75 E-value=7.7e-18 Score=155.64 Aligned_cols=163 Identities=13% Similarity=0.091 Sum_probs=110.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-----CeEEEEccC------CCC--CCCC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-----KVSFQVGDA------LQQ--PFPD 224 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-----~i~~~~~d~------~~~--~~~~ 224 (379)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... +++|.+.|+ .++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 378999999999987666665545799999999999999999987655311 267888887 322 3567
Q ss_pred CcccEEEeccccCCC---CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCc--------------cccchHH---HHHH
Q 016981 225 GQFDLVWSMESGEHM---PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSE--------------ESLQPWE---QELL 284 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~---~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~--------------~~~~~~~---~~~~ 284 (379)
++||+|+|..+++|+ .+...++++++++|||||++++.+.......... ..+.... ...+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 899999999999875 4568999999999999999999875321100000 0000000 0000
Q ss_pred HHHhhcc---CCC-CCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 285 KKICDAY---YLP-AWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 285 ~~~~~~~---~~~-~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
....... ..+ .+.+++++.++++++||+.+....+.
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFA 247 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHH
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChH
Confidence 0000000 001 25578999999999999999887654
No 82
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.75 E-value=4.6e-17 Score=141.98 Aligned_cols=133 Identities=17% Similarity=0.102 Sum_probs=108.7
Q ss_pred HHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC
Q 016981 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP 223 (379)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 223 (379)
.++..+...+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..+++.++.+..+|+.+....
T Consensus 46 ~~l~~l~~~~-----~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 46 LTLAALAPRR-----GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHCCCT-----TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHhcCCCC-----CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 3445555544 889999999999999999998 8899999999999999999999998866899999999884223
Q ss_pred CCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHH
Q 016981 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV 303 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
...||+|++...+ +.. +++++.++|||||++++..... . +..++.
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~---------------~---------------~~~~~~ 164 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL---------------E---------------SETLLT 164 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH---------------H---------------HHHHHH
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc---------------c---------------cHHHHH
Confidence 4579999987644 556 9999999999999999976321 0 345677
Q ss_pred HHHHhCCCceeEEE
Q 016981 304 KLLQSLSLEDIKAE 317 (379)
Q Consensus 304 ~~l~~aGF~~v~~~ 317 (379)
+++++.||+++.+.
T Consensus 165 ~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 165 QLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHCSEEEEEE
T ss_pred HHHHhCCCcEEEEE
Confidence 88999999877764
No 83
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.75 E-value=4.4e-18 Score=154.08 Aligned_cols=149 Identities=11% Similarity=0.006 Sum_probs=114.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----------------------------CCC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL----------------------------ADK 209 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----------------------------~~~ 209 (379)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...+. ..+
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 3789999999999999998876323899999999999999988754320 002
Q ss_pred e-EEEEccCCCCC-CCC---CcccEEEeccccC----CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHH
Q 016981 210 V-SFQVGDALQQP-FPD---GQFDLVWSMESGE----HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWE 280 (379)
Q Consensus 210 i-~~~~~d~~~~~-~~~---~~fD~V~~~~~l~----~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 280 (379)
+ .+..+|+.+.+ +++ ++||+|++..+++ +++++..+++++.++|||||++++.+...... +..
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~------~~~-- 207 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY------YMI-- 207 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE------EEE--
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce------EEc--
Confidence 7 89999998863 355 8999999999999 55677899999999999999999988543210 000
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCC
Q 016981 281 QELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 321 (379)
.........++.+++.++|+++||+++++.....
T Consensus 208 -------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 241 (265)
T 2i62_A 208 -------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQ 241 (265)
T ss_dssp -------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECC
T ss_pred -------CCccccccccCHHHHHHHHHHCCCEEEEEEEecc
Confidence 0000111245899999999999999999887654
No 84
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.75 E-value=5.7e-17 Score=154.19 Aligned_cols=150 Identities=16% Similarity=0.187 Sum_probs=112.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. ++++|+.+|+.+ +++.+ |+|++..++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~--D~v~~~~vl 271 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPKG--DAIFIKWIC 271 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC--SEEEEESCG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCCC--CEEEEechh
Confidence 37899999999999999999988 779999999 8888876541 589999999987 66644 999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhh-ccCCCCCCCHHHHHHHHHhCCCce
Q 016981 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD-AYYLPAWCSTADYVKLLQSLSLED 313 (379)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGF~~ 313 (379)
||+++. .++|++++++|||||+|++.+...+...... ........+.-... ........+.++|+++|+++||++
T Consensus 272 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 272 HDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPS--IATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRG 349 (368)
T ss_dssp GGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCC--HHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc--hhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCee
Confidence 999876 4889999999999999999997654422111 00111111111111 111122458999999999999999
Q ss_pred eEEEecC
Q 016981 314 IKAEDWS 320 (379)
Q Consensus 314 v~~~~~~ 320 (379)
+++....
T Consensus 350 v~~~~~~ 356 (368)
T 3reo_A 350 FKVASCA 356 (368)
T ss_dssp EEEEEEE
T ss_pred eEEEEeC
Confidence 9887553
No 85
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.74 E-value=7.8e-17 Score=152.97 Aligned_cols=162 Identities=15% Similarity=0.148 Sum_probs=118.5
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
....+++.++ .. +..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++. ++++|+.+|+.
T Consensus 188 ~~~~~~~~~~~~~-----~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~ 254 (364)
T 3p9c_A 188 ITKKLLELYHGFE-----GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMF 254 (364)
T ss_dssp HHHHHHHHCCTTT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTT
T ss_pred HHHHHHHhccccc-----CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcC
Confidence 3455666654 33 37899999999999999999988 679999999 8888876541 58999999998
Q ss_pred CCCCCCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhh-ccCCCC
Q 016981 219 QQPFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD-AYYLPA 295 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 295 (379)
+ +++.+ |+|++..++|++++. .++|++++++|||||+|++.+...+...... ........+.-... ......
T Consensus 255 ~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~d~~m~~~~~~g~ 329 (364)
T 3p9c_A 255 K-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEAN--PSSQGVFHVDMIMLAHNPGGR 329 (364)
T ss_dssp T-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSS--HHHHHHHHHHHHHHHHCSSCC
T ss_pred C-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcc--hhhhhHHHhHHHHHhcccCCc
Confidence 7 77654 999999999999765 5899999999999999999997654432111 00000011111111 111122
Q ss_pred CCCHHHHHHHHHhCCCceeEEEecC
Q 016981 296 WCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 296 ~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
..+.++|.++|+++||+++++....
T Consensus 330 ~rt~~e~~~ll~~AGF~~v~~~~~~ 354 (364)
T 3p9c_A 330 ERYEREFQALARGAGFTGVKSTYIY 354 (364)
T ss_dssp CCBHHHHHHHHHHTTCCEEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCceEEEEEcC
Confidence 4589999999999999999987553
No 86
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.74 E-value=7.1e-17 Score=147.17 Aligned_cols=161 Identities=10% Similarity=0.106 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcc---cHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE
Q 016981 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI---GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQ 213 (379)
Q Consensus 138 ~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGt---G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~ 213 (379)
....+.+.++.+.... ...+|||||||+ |.++..+.+.. +.+|+++|+|+.|++.|++++.. .+++.++
T Consensus 61 ~~~~~~~~~~~l~~~~----~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~ 133 (274)
T 2qe6_A 61 NRKVLVRGVRFLAGEA----GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVF 133 (274)
T ss_dssp HHHHHHHHHHHHHTTT----CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEE
T ss_pred HhHHHHHHHHHHhhcc----CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEE
Confidence 3445555555543111 257999999999 99887777665 68999999999999999998843 2589999
Q ss_pred EccCCCCC-----------CCCCcccEEEeccccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHH
Q 016981 214 VGDALQQP-----------FPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWE 280 (379)
Q Consensus 214 ~~d~~~~~-----------~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 280 (379)
.+|+.+.+ ++.++||+|++..+++|+++ +..++++++++|||||+|++.++..+. + ..... .
T Consensus 134 ~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~--~~~~~-~ 208 (274)
T 2qe6_A 134 TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--L--PAQQK-L 208 (274)
T ss_dssp ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--C--HHHHH-H
T ss_pred EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--h--HHHHH-H
Confidence 99997531 23358999999999999987 799999999999999999999976532 1 11111 1
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 281 QELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
...+......+ .+++.+++.++| .||+.++
T Consensus 209 ~~~~~~~~~~~---~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 209 ARITRENLGEG---WARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HHHHHHHHSCC---CCBCHHHHHHTT--TTCEECT
T ss_pred HHHHHhcCCCC---ccCCHHHHHHHh--CCCeEcc
Confidence 12222211111 346999999999 6998765
No 87
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=2.3e-17 Score=141.89 Aligned_cols=125 Identities=22% Similarity=0.358 Sum_probs=107.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEec-cccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM-ESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~-~~l~ 237 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. +++.+..+|+.+.++++++||+|++. .+++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 119 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNVMG 119 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCCGG
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcHHh
Confidence 789999999999999999987 789999999999999999865 36899999999888878899999998 7888
Q ss_pred CCC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 238 HMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 238 ~~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
|+. +...+++++.++|||||.+++...... .++.+++.++++++||+++.
T Consensus 120 ~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 120 FLAEDGREPALANIHRALGADGRAVIGFGAGR----------------------------GWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS----------------------------SCCHHHHHHHHHHHTEEEEE
T ss_pred hcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC----------------------------CcCHHHHHHHHHHcCCEEee
Confidence 884 448899999999999999999763211 13688999999999999887
Q ss_pred EEe
Q 016981 316 AED 318 (379)
Q Consensus 316 ~~~ 318 (379)
...
T Consensus 172 ~~~ 174 (195)
T 3cgg_A 172 AFE 174 (195)
T ss_dssp EES
T ss_pred eec
Confidence 753
No 88
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.73 E-value=1.3e-17 Score=146.57 Aligned_cols=102 Identities=22% Similarity=0.305 Sum_probs=92.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... +++.+.++|+.+.+ ++++||+|++..+++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 3789999999999999999987 579999999999999999987653 37999999999987 578999999999999
Q ss_pred CCCCH---HHHHHHHHHhcCCCCEEEEEec
Q 016981 238 HMPDK---SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 238 ~~~~~---~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|++++ ..+++++.++|||||.+++.+.
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99987 5779999999999999999874
No 89
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=4.1e-17 Score=138.58 Aligned_cols=136 Identities=10% Similarity=0.012 Sum_probs=108.0
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-
Q 016981 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ- 219 (379)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~- 219 (379)
...+++.+...+ +.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+++.++ ++.+|..+
T Consensus 14 ~~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 14 RALAISALAPKP-----HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHCCCT-----TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG
T ss_pred HHHHHHHhcccC-----CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh
Confidence 344555555544 7899999999999999999987 679999999999999999999988886688 88888754
Q ss_pred CCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCH
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
++..+++||+|++..++++ ..+++++.++|||||++++...... +.
T Consensus 88 ~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~ 133 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE------------------------------SE 133 (178)
T ss_dssp GGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH------------------------------HH
T ss_pred hhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc------------------------------cH
Confidence 3332378999999999887 6789999999999999998774210 24
Q ss_pred HHHHHHHHhCCCceeEEE
Q 016981 300 ADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 300 ~~~~~~l~~aGF~~v~~~ 317 (379)
..+.+++++.|++...+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 134 QMLWALRKQFGGTISSFA 151 (178)
T ss_dssp HHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHcCCeeEEEE
Confidence 456778888898776653
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=2.6e-18 Score=153.32 Aligned_cols=104 Identities=19% Similarity=0.128 Sum_probs=87.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEe-ccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWS-MES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~-~~~ 235 (379)
+.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....+ .++.++++|+.++ ++++++||+|++ .+.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 78999999999999999977544489999999999999999887655 5799999999887 888899999999 554
Q ss_pred c----CCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 236 G----EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 236 l----~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+ .|..+...++++++++|||||++++.+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 3 1222335789999999999999998764
No 91
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=2.1e-17 Score=151.72 Aligned_cols=136 Identities=18% Similarity=0.209 Sum_probs=111.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ ++.+..+|+.+.++ +++||+|++..+++|
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccchhh
Confidence 789999999999999999998 78999999999999999999998876 89999999998876 789999999999999
Q ss_pred CCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 239 MPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 239 ~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
+++ ...+++++.++|||||.+++.........+.. ......++.+++.++++. |+++..
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP-----------------LPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS-----------------SCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC-----------------CCccccCCHHHHHHHhcC--CEEEEE
Confidence 964 46999999999999999888765433211110 011124577888888854 888776
Q ss_pred E
Q 016981 317 E 317 (379)
Q Consensus 317 ~ 317 (379)
.
T Consensus 258 ~ 258 (286)
T 3m70_A 258 N 258 (286)
T ss_dssp E
T ss_pred E
Confidence 4
No 92
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.72 E-value=9e-17 Score=151.91 Aligned_cols=163 Identities=18% Similarity=0.225 Sum_probs=120.7
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 221 (379)
..+++..+... ..+|||||||+|.++..+++++ +.+++..|+ |.+++.|++++...+ .++++++.+|+.+.+
T Consensus 169 ~~~~~~~~~~~-----~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~ 241 (353)
T 4a6d_A 169 RSVLTAFDLSV-----FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP 241 (353)
T ss_dssp HHHHHSSCGGG-----CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC
T ss_pred HHHHHhcCccc-----CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC
Confidence 34455444443 7899999999999999999998 778999998 889999998876544 479999999998766
Q ss_pred CCCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCH
Q 016981 222 FPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
.+ .+|+|++..+||+++|. .++|+++++.|+|||+++|.+...+..... +.....+.-..-......-.|.
T Consensus 242 ~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~-----~~~~~~~dl~ml~~~~g~ert~ 314 (353)
T 4a6d_A 242 LP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRG-----PLLTQLYSLNMLVQTEGQERTP 314 (353)
T ss_dssp CC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCC-----CHHHHHHHHHHHHSSSCCCCCH
T ss_pred CC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCC-----CHHHHHHHHHHHHhCCCcCCCH
Confidence 54 47999999999999876 578999999999999999999765432211 1111111111000111123589
Q ss_pred HHHHHHHHhCCCceeEEEec
Q 016981 300 ADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 300 ~~~~~~l~~aGF~~v~~~~~ 319 (379)
++|+++|+++||+++++...
T Consensus 315 ~e~~~ll~~AGf~~v~v~~~ 334 (353)
T 4a6d_A 315 THYHMLLSSAGFRDFQFKKT 334 (353)
T ss_dssp HHHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHCCCceEEEEEc
Confidence 99999999999999988644
No 93
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.72 E-value=4.6e-17 Score=155.11 Aligned_cols=160 Identities=19% Similarity=0.213 Sum_probs=117.2
Q ss_pred HHHHHHHcC-CCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 142 IEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 142 ~~~~l~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
...+++.++ .. ++.+|||||||+|.++..+++++ +.+++++|+ +.+++.|++ . +++++..+|+.+
T Consensus 197 ~~~l~~~~~~~~-----~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~ 263 (372)
T 1fp1_D 197 MKRMLEIYTGFE-----GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA 263 (372)
T ss_dssp HHHHHHHCCTTT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT
T ss_pred HHHHHHHhhccC-----CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc
Confidence 455666654 33 37899999999999999999987 678999999 999987764 1 479999999987
Q ss_pred CCCCCCcccEEEeccccCCCCCHH--HHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
+++. ||+|++..+++|+++.. .+|++++++|||||++++.++..+..... .+.......+............+
T Consensus 264 -~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~ 338 (372)
T 1fp1_D 264 -SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNT--SEESKLVSTLDNLMFITVGGRER 338 (372)
T ss_dssp -CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCS--SHHHHHHHHHHHHHHHHHSCCCE
T ss_pred -CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCcc--chHHHHHHHhhHHHHhccCCccC
Confidence 6654 99999999999999887 99999999999999999998765432111 11000011111100000001245
Q ss_pred CHHHHHHHHHhCCCceeEEEec
Q 016981 298 STADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 298 ~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
+.++|.++|+++||+++++...
T Consensus 339 t~~e~~~ll~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 339 TEKQYEKLSKLSGFSKFQVACR 360 (372)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEE
T ss_pred CHHHHHHHHHHCCCceEEEEEc
Confidence 8999999999999999988754
No 94
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.72 E-value=1.4e-16 Score=139.83 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=104.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--CCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~~~ 235 (379)
+.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ +++.++.+|+.+++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 7899999999999999999987 67999999999999999999998887 68999999998876 67789999999865
Q ss_pred cCCCC--------CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 016981 236 GEHMP--------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ 307 (379)
Q Consensus 236 l~~~~--------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (379)
..+.. ....+++++.++|||||.+++..-. .. ..+.+.+.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------~~---------------~~~~~~~~~~ 170 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN---------------RG---------------LFEYSLVSFS 170 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC---------------HH---------------HHHHHHHHHH
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC---------------HH---------------HHHHHHHHHH
Confidence 44332 1257999999999999999986511 00 0234567788
Q ss_pred hCCCceeEEE
Q 016981 308 SLSLEDIKAE 317 (379)
Q Consensus 308 ~aGF~~v~~~ 317 (379)
++||+.+.+.
T Consensus 171 ~~g~~~~~~~ 180 (214)
T 1yzh_A 171 QYGMKLNGVW 180 (214)
T ss_dssp HHTCEEEEEE
T ss_pred HCCCeeeecc
Confidence 8899887765
No 95
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=1.1e-16 Score=144.83 Aligned_cols=151 Identities=21% Similarity=0.263 Sum_probs=109.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .+ +..+|+.++++++++||+|++..++.|
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 789999999999999999987 7899999999999999998752 12 889999999888899999999887766
Q ss_pred C-CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCC---ccccchHHHHHHHHHhhc--c----CCCCCCCHHHHHHHHHh
Q 016981 239 M-PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPS---EESLQPWEQELLKKICDA--Y----YLPAWCSTADYVKLLQS 308 (379)
Q Consensus 239 ~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~l~~ 308 (379)
+ +++..+++++.++|||||.+++........... ...+ ......+...... . ....+++++++.++
T Consensus 127 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 202 (260)
T 2avn_A 127 YVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAW-DQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL--- 202 (260)
T ss_dssp HCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCH-HHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---
T ss_pred ccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhH-HHHHHHHhccccccCCCceeEEEeccCHHHHHHh---
Confidence 5 789999999999999999999987542100000 0000 0000111110000 0 00125688888877
Q ss_pred CCCceeEEEecCC
Q 016981 309 LSLEDIKAEDWSQ 321 (379)
Q Consensus 309 aGF~~v~~~~~~~ 321 (379)
+||+++++.....
T Consensus 203 aGf~~~~~~~~~~ 215 (260)
T 2avn_A 203 EGFETVDIRGIGV 215 (260)
T ss_dssp TTEEEEEEEEECS
T ss_pred cCceEEEEECCCC
Confidence 9999998876554
No 96
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.71 E-value=1.1e-16 Score=139.38 Aligned_cols=125 Identities=21% Similarity=0.170 Sum_probs=106.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++. ++.+..+|+.+.+ +++||+|+++.++++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV--DGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC--CSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC--CCCceEEEECCcHHH
Confidence 7899999999999999988763459999999999999999999988874 4999999987653 588999999887766
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEe
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
+ ..+++++.++|||||++++.++... +.+++.++++++||+.++...
T Consensus 138 ~---~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 138 L---LDLIPQLDSHLNEDGQVIFSGIDYL------------------------------QLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp H---HHHGGGSGGGEEEEEEEEEEEEEGG------------------------------GHHHHHHHHHHTTEEEEEEEE
T ss_pred H---HHHHHHHHHhcCCCCEEEEEecCcc------------------------------cHHHHHHHHHHcCCceEEeec
Confidence 4 7889999999999999999764321 356788999999999988764
Q ss_pred c
Q 016981 319 W 319 (379)
Q Consensus 319 ~ 319 (379)
.
T Consensus 185 ~ 185 (205)
T 3grz_A 185 A 185 (205)
T ss_dssp E
T ss_pred c
Confidence 3
No 97
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.71 E-value=5e-17 Score=145.36 Aligned_cols=132 Identities=15% Similarity=0.094 Sum_probs=107.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC---CCcccEEEec
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP---DGQFDLVWSM 233 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~V~~~ 233 (379)
++.+|||+|||+|..+..++... +.+|+|+|+|+.+++.|+++++..++. ++.++++|+.++++. +++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 37899999999999999999755 679999999999999999999988874 699999999887653 5789999987
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 016981 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (379)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 313 (379)
. +.+...+++++.++|||||++++..-.. . .. ..+++.+.++++||+.
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~----------~---~~---------------~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVALKAAS----------A---EE---------------ELNAGKKAITTLGGEL 196 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEEECC-----------C---HH---------------HHHHHHHHHHHTTEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEEeCCC----------c---hH---------------HHHHHHHHHHHcCCeE
Confidence 6 4678999999999999999998864110 0 00 1345778899999999
Q ss_pred eEEEecCCC
Q 016981 314 IKAEDWSQN 322 (379)
Q Consensus 314 v~~~~~~~~ 322 (379)
++...+..+
T Consensus 197 ~~~~~~~~~ 205 (240)
T 1xdz_A 197 ENIHSFKLP 205 (240)
T ss_dssp EEEEEEECT
T ss_pred eEEEEEecC
Confidence 888766544
No 98
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.71 E-value=1.8e-16 Score=140.65 Aligned_cols=129 Identities=13% Similarity=0.072 Sum_probs=103.9
Q ss_pred CCCEEEEeCCc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~~~~ 235 (379)
++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++...++ ++.+.++|+... ++++++||+|+++-.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEECCC
Confidence 38999999999 99999999987678999999999999999999998876 899999997544 456789999999866
Q ss_pred cCCCCC-------------------HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC
Q 016981 236 GEHMPD-------------------KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (379)
Q Consensus 236 l~~~~~-------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
+.+..+ ...+++++.++|||||++++......
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------------- 183 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE----------------------------- 183 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-----------------------------
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-----------------------------
Confidence 655433 37889999999999999998652110
Q ss_pred CCHHHHHHHHHhCCCceeEEE
Q 016981 297 CSTADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 297 ~~~~~~~~~l~~aGF~~v~~~ 317 (379)
...+++.++++++||+...+.
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHcCCceEEEE
Confidence 024678889999999766553
No 99
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.70 E-value=2.9e-17 Score=144.18 Aligned_cols=111 Identities=19% Similarity=0.272 Sum_probs=95.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+ +.+|+|+|+|+. ++.+..+|+.++++++++||+|++..++++
T Consensus 68 ~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp TSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred CCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 789999999999988776 368999999985 466889999998888899999999999965
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEe
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
.++..+++++.++|||||++++.++... +.+.+++.++|+++||+++....
T Consensus 128 -~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 128 -TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------------------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------------------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred -cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------------------CCCHHHHHHHHHHCCCEEEEEec
Confidence 8999999999999999999999874311 12789999999999999887653
No 100
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=9.5e-17 Score=137.45 Aligned_cols=106 Identities=10% Similarity=0.109 Sum_probs=87.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-CCCCcccEEEecc-c
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME-S 235 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~V~~~~-~ 235 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++++..++ +++.+.+.|...++ +.+++||+|+++. .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 3889999999999999999998 88999999999999999999998887 68999998877753 4578899998773 2
Q ss_pred cCC-------C-CCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 236 GEH-------M-PDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 236 l~~-------~-~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+.+ . .+...+++++.++|||||++++..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 222 1 23357889999999999999998764
No 101
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.69 E-value=3.9e-17 Score=143.71 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=104.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHH----HHcCCCCCeEEEEccCCCCCCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALA----AARGLADKVSFQVGDALQQPFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++.+ +.+|+|+|+|+.|++.+.+++ ...++ +++.+.++|+.++++++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEEEEE
Confidence 8899999999999999999987 689999999999888643333 23444 4899999999999887766 777632
Q ss_pred c---cc--CCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 016981 234 E---SG--EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS 308 (379)
Q Consensus 234 ~---~l--~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (379)
. .+ +|++++..++++++++|||||++++............ .+ ............+.+..++++
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~l~~~l~~ 173 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVP-EV-----------GEHPEPTPDSADEWLAPRYAE 173 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG-GG-----------TTCCCCCHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccccccc-cc-----------ccCCccchHHHHHHHHHHHHH
Confidence 2 22 2677889999999999999999999542211100000 00 000000000123457789999
Q ss_pred CCCceeEEEecCC
Q 016981 309 LSLEDIKAEDWSQ 321 (379)
Q Consensus 309 aGF~~v~~~~~~~ 321 (379)
+||++++++.+..
T Consensus 174 aGf~i~~~~~~~~ 186 (218)
T 3mq2_A 174 AGWKLADCRYLEP 186 (218)
T ss_dssp TTEEEEEEEEECH
T ss_pred cCCCceeeeccch
Confidence 9999998876543
No 102
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.69 E-value=1.5e-16 Score=141.29 Aligned_cols=133 Identities=15% Similarity=0.228 Sum_probs=101.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC----CCCCCCcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----QPFPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~fD~V~~ 232 (379)
++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.++++++.. +++.+..+|+.. .++. ++||+|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~D~v~- 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-EKVDVIY- 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCEEEEE-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-ccEEEEE-
Confidence 488999999999999999999863 79999999999999999887543 589999999988 6665 7899998
Q ss_pred ccccCCCCCH---HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 016981 233 MESGEHMPDK---SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (379)
Q Consensus 233 ~~~l~~~~~~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 309 (379)
++++++ ..+++++.++|||||++++. +..... +... .. ..+ ..+++. +|+++
T Consensus 149 ----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~-~~~~--~~--~~~--------------~~~~l~-~l~~~ 203 (230)
T 1fbn_A 149 ----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSI-DVTK--DP--KEI--------------FKEQKE-ILEAG 203 (230)
T ss_dssp ----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGT-CSSS--CH--HHH--------------HHHHHH-HHHHH
T ss_pred ----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCC-CCCC--CH--HHh--------------hHHHHH-HHHHC
Confidence 345555 77899999999999999997 321110 0000 00 011 135677 89999
Q ss_pred CCceeEEEecC
Q 016981 310 SLEDIKAEDWS 320 (379)
Q Consensus 310 GF~~v~~~~~~ 320 (379)
||+.++..++.
T Consensus 204 Gf~~~~~~~~~ 214 (230)
T 1fbn_A 204 GFKIVDEVDIE 214 (230)
T ss_dssp TEEEEEEEECT
T ss_pred CCEEEEEEccC
Confidence 99998877543
No 103
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.69 E-value=4.7e-17 Score=144.16 Aligned_cols=118 Identities=18% Similarity=0.264 Sum_probs=99.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC-CCCCCC-CCcccEEEecccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQQPFP-DGQFDLVWSMESG 236 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~fD~V~~~~~l 236 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .+++.+.++|+ ..+|++ +++||+|+++
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~--- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR--- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE---
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC---
Confidence 789999999999999999998 78999999999999999987 25799999999 567887 8899999987
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
.++..+++++.++|||||+++... ...+.+++.+.++++||+.+..
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~~~~-------------------------------~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFLYVG-------------------------------PRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEEEEE-------------------------------SSSCCTHHHHHHHHTTCEEEEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEEEeC-------------------------------CcCCHHHHHHHHHHCCCeEEEE
Confidence 466788999999999999998111 0224567899999999998877
Q ss_pred EecC
Q 016981 317 EDWS 320 (379)
Q Consensus 317 ~~~~ 320 (379)
....
T Consensus 165 ~~~~ 168 (226)
T 3m33_A 165 DHVS 168 (226)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 6443
No 104
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.69 E-value=2.3e-16 Score=138.50 Aligned_cols=104 Identities=22% Similarity=0.172 Sum_probs=89.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--CCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~~~ 235 (379)
+.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ .|+.++.+|+.+++ +++++||.|++...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 6799999999999999999987 67999999999999999999998887 58999999998865 67789999987654
Q ss_pred cCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 GEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 l~~~~~--------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
..+... ...+++++.++|||||.+++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 433321 2678999999999999999875
No 105
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.69 E-value=2.7e-16 Score=148.73 Aligned_cols=146 Identities=16% Similarity=0.249 Sum_probs=110.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
..+|||||||+|.++..+++++ +.+++++|+ +.+++.|++ . +++++..+|+.+ +++ .||+|++..+++
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p--~~D~v~~~~~lh 257 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIP--NADAVLLKYILH 257 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCC--CccEEEeehhhc
Confidence 6899999999999999999987 679999999 999988764 1 369999999976 554 399999999999
Q ss_pred CCCCHH--HHHHHHHHhcCC---CCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 016981 238 HMPDKS--KFVSELARVTAP---AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (379)
Q Consensus 238 ~~~~~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 312 (379)
|+++.. .+|++++++||| ||++++.++..+...... .. ......+........ ...++.++|.++|+++||+
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~-~~-~~~~~~~d~~~~~~~-g~~~t~~e~~~ll~~aGf~ 334 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDEN-QV-TQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGFQ 334 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCH-HH-HHHHHHHHHHGGGGT-CCCEEHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCcc-ch-hhhHhhccHHHHhcc-CCCCCHHHHHHHHHHCCCC
Confidence 999887 999999999999 999999987654322110 00 011111111111011 2345899999999999999
Q ss_pred eeEEEe
Q 016981 313 DIKAED 318 (379)
Q Consensus 313 ~v~~~~ 318 (379)
++++..
T Consensus 335 ~~~~~~ 340 (352)
T 1fp2_A 335 HYKISP 340 (352)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 998765
No 106
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.69 E-value=5.8e-16 Score=141.38 Aligned_cols=139 Identities=15% Similarity=0.224 Sum_probs=111.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
.+++.+++.+. . ++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+++ ++.+.++|+.
T Consensus 97 ~l~~~~l~~~~-~-----~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 97 CLVEQALARLP-E-----QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp HHHHHHHHHSC-S-----SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred HHHHHHHHhcc-c-----CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 45566666654 2 37899999999999999999876 679999999999999999999988874 7999999987
Q ss_pred CCCCCCCcccEEEecc-------------ccCCCC------------CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCc
Q 016981 219 QQPFPDGQFDLVWSME-------------SGEHMP------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSE 273 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~-------------~l~~~~------------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~ 273 (379)
+. +++++||+|+++- ++.|.+ +...+++++.++|||||++++...
T Consensus 170 ~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~--------- 239 (276)
T 2b3t_A 170 SA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG--------- 239 (276)
T ss_dssp GG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC---------
T ss_pred hh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC---------
Confidence 63 3467899999983 333332 346789999999999999998531
Q ss_pred cccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEE
Q 016981 274 ESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 317 (379)
+...+++.++++++||+.+++.
T Consensus 240 ----------------------~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 240 ----------------------WQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp ----------------------SSCHHHHHHHHHHTTCTTCCEE
T ss_pred ----------------------chHHHHHHHHHHHCCCcEEEEE
Confidence 1257789999999999877654
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.69 E-value=4.2e-16 Score=137.43 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=104.3
Q ss_pred CCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC---CCCCCcccE
Q 016981 155 PTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPDGQFDL 229 (379)
Q Consensus 155 ~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~fD~ 229 (379)
+.+|+.+|||+|||+|.++..+++.. .++|+|+|+|+.|++.++++++.. .|+..+..|.... ++..+++|+
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceEEE
Confidence 34569999999999999999999986 469999999999999999887654 4899999887653 456788999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 309 (379)
|++. +.|..+...++.++++.|||||+++++...... .. .. +.-...++..+.|+++
T Consensus 151 Vf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-------------d~---~~-----p~~~~~~~ev~~L~~~ 207 (233)
T 4df3_A 151 LYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-------------DV---TT-----EPSEVYKREIKTLMDG 207 (233)
T ss_dssp EEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-------------HH---HT-----CCCHHHHHHHHHHHHT
T ss_pred EEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-------------CC---CC-----ChHHHHHHHHHHHHHC
Confidence 9863 455567788999999999999999987522100 00 00 0000123445778999
Q ss_pred CCceeEEEec
Q 016981 310 SLEDIKAEDW 319 (379)
Q Consensus 310 GF~~v~~~~~ 319 (379)
||+.++..++
T Consensus 208 GF~l~e~i~L 217 (233)
T 4df3_A 208 GLEIKDVVHL 217 (233)
T ss_dssp TCCEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 9999887654
No 108
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=4.7e-16 Score=133.74 Aligned_cols=107 Identities=15% Similarity=0.050 Sum_probs=93.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--CCCCcccEEEecccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMESG 236 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~~~l 236 (379)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++ ++++++++|+.+.+ +++++||+|++...+
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 789999999999999988876455899999999999999999998887 68999999998763 446899999998887
Q ss_pred CCC-CCHHHHHHHHHH--hcCCCCEEEEEeccC
Q 016981 237 EHM-PDKSKFVSELAR--VTAPAGTIIIVTWCH 266 (379)
Q Consensus 237 ~~~-~~~~~~l~~~~r--~LkpgG~l~i~~~~~ 266 (379)
++. .+...++.++.+ +|||||.+++.....
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 765 567899999999 999999999977543
No 109
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.69 E-value=3.9e-16 Score=141.19 Aligned_cols=130 Identities=17% Similarity=0.129 Sum_probs=106.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--CCCCcccEEEecccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMESG 236 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~~~~l 236 (379)
+.+|||+|||+|.++..++++...+|+|+|+++.+++.|++++...++.+++.++.+|+.+.+ +++++||+|+++-.+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 889999999999999999998655999999999999999999999998778999999998874 557899999997554
Q ss_pred CCC--------------------CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC
Q 016981 237 EHM--------------------PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (379)
Q Consensus 237 ~~~--------------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
... .+...+++.+.++|||||++++....
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------------------------------- 178 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP------------------------------- 178 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-------------------------------
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-------------------------------
Confidence 332 12357999999999999999985410
Q ss_pred CCHHHHHHHHHhCCCceeEEEec
Q 016981 297 CSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 297 ~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
....++.+.+++.||....+..+
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEEEEe
Confidence 13556778888999988776554
No 110
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=3.6e-16 Score=140.52 Aligned_cols=116 Identities=28% Similarity=0.413 Sum_probs=95.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
...+..++......+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. ++.+.++|+.
T Consensus 27 ~~~~~~~~~~~~~~~-----~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~ 98 (252)
T 1wzn_A 27 IDFVEEIFKEDAKRE-----VRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVL 98 (252)
T ss_dssp HHHHHHHHHHTCSSC-----CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGG
T ss_pred HHHHHHHHHHhcccC-----CCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChh
Confidence 345666666654333 789999999999999999987 78999999999999999999987764 7999999999
Q ss_pred CCCCCCCcccEEEecc-ccCCCC--CHHHHHHHHHHhcCCCCEEEEEe
Q 016981 219 QQPFPDGQFDLVWSME-SGEHMP--DKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~-~l~~~~--~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+++++ ++||+|++.. .++++. +...++++++++|||||.+++..
T Consensus 99 ~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 99 EIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 88764 6899999874 444543 45789999999999999998754
No 111
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.68 E-value=2.8e-16 Score=146.11 Aligned_cols=107 Identities=18% Similarity=0.155 Sum_probs=91.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC------CCCCeEEEEccCCCCC----CC--CCc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG------LADKVSFQVGDALQQP----FP--DGQ 226 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~~~i~~~~~d~~~~~----~~--~~~ 226 (379)
+.+|||+|||+|.++..+++..+.+|+|+|+|+.|++.|+++....+ ...++.+.++|+..++ ++ +++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 78999999999999999987556799999999999999999887542 1247999999998875 53 458
Q ss_pred ccEEEeccccCCC-CC---HHHHHHHHHHhcCCCCEEEEEecc
Q 016981 227 FDLVWSMESGEHM-PD---KSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 227 fD~V~~~~~l~~~-~~---~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
||+|++..+++|+ .+ ...++++++++|||||.+++..+.
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 9999999999887 44 479999999999999999998753
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.68 E-value=3.6e-16 Score=134.01 Aligned_cols=130 Identities=23% Similarity=0.342 Sum_probs=105.6
Q ss_pred HHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC
Q 016981 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP 223 (379)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 223 (379)
.+++.+...+ +.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.+++++...++..++.+..+|+.+ +++
T Consensus 24 ~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~ 96 (192)
T 1l3i_A 24 LIMCLAEPGK-----NDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALC 96 (192)
T ss_dssp HHHHHHCCCT-----TCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHT
T ss_pred HHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcc
Confidence 3444445443 8899999999999999999875 89999999999999999999988876789999999876 223
Q ss_pred C-CcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHH
Q 016981 224 D-GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADY 302 (379)
Q Consensus 224 ~-~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
. ++||+|++..++++ ...+++++.++|+|||.+++..... . +..++
T Consensus 97 ~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~---------------~---------------~~~~~ 143 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILL---------------E---------------TKFEA 143 (192)
T ss_dssp TSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBH---------------H---------------HHHHH
T ss_pred cCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCc---------------c---------------hHHHH
Confidence 3 58999999877654 5899999999999999999976321 0 24567
Q ss_pred HHHHHhCCCce
Q 016981 303 VKLLQSLSLED 313 (379)
Q Consensus 303 ~~~l~~aGF~~ 313 (379)
.+.+++.||..
T Consensus 144 ~~~l~~~g~~~ 154 (192)
T 1l3i_A 144 MECLRDLGFDV 154 (192)
T ss_dssp HHHHHHTTCCC
T ss_pred HHHHHHCCCce
Confidence 88999999943
No 113
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.68 E-value=1.6e-16 Score=139.84 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=89.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C--CCCCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P--FPDGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~fD~V~~~~ 234 (379)
+.+|||||||+|.++..+++.. +..|+|+|+|+.+++.|++++...++ .|+.++.+|+.++ + +++++||.|++++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 6799999999999999999987 67899999999999999999998887 4799999998874 3 6789999999885
Q ss_pred ccCCCCCH--------HHHHHHHHHhcCCCCEEEEEe
Q 016981 235 SGEHMPDK--------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 235 ~l~~~~~~--------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
...+.... ..++++++++|||||.+++.+
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 54443222 259999999999999999976
No 114
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.68 E-value=7.3e-17 Score=142.80 Aligned_cols=153 Identities=15% Similarity=0.117 Sum_probs=99.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCC-HHHHHHH---HHHHHHcCCCCCeEEEEccCCCCCCC-CCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLS-PVQAQRA---NALAAARGLADKVSFQVGDALQQPFP-DGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s-~~~~~~a---~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~V~~ 232 (379)
+.+|||||||+|.++..+++.. +.+|+|+|+| +.|++.| +++....++ +++.+.++|++++|.. .+.+|.|++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 7899999999999999999755 6789999999 6677666 777766676 4899999999988531 134444444
Q ss_pred ccccCC-----CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 016981 233 MESGEH-----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ 307 (379)
Q Consensus 233 ~~~l~~-----~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (379)
+....+ ..+...++++++|+|||||++++........ +. .. ..... .+ ...+.++..+++.++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~-~~---~~----~~~~~-~~-~~~~~~~~~~el~~~l~ 173 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY-EE---AE----IKKRG-LP-LLSKAYFLSEQYKAELS 173 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------------CCHHHHHSHHHHHHHH
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc-hh---ch----hhhcC-CC-CCChhhcchHHHHHHHH
Confidence 332111 1233578999999999999999944222210 00 00 00000 00 00001112234899999
Q ss_pred hCCCceeEEEecCCC
Q 016981 308 SLSLEDIKAEDWSQN 322 (379)
Q Consensus 308 ~aGF~~v~~~~~~~~ 322 (379)
++||+++..+.+..+
T Consensus 174 ~aGf~v~~~~~~~~~ 188 (225)
T 3p2e_A 174 NSGFRIDDVKELDNE 188 (225)
T ss_dssp HHTCEEEEEEEECHH
T ss_pred HcCCCeeeeeecCHH
Confidence 999999988866543
No 115
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.68 E-value=1.8e-16 Score=149.22 Aligned_cols=125 Identities=14% Similarity=0.215 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHH-------HHcCC-C
Q 016981 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALA-------AARGL-A 207 (379)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~-------~~~~~-~ 207 (379)
.....+..+++.+.+.+ +.+|||||||+|.++..++...++ +|+|||+|+.+++.|+++. +..|+ .
T Consensus 157 t~~~~i~~il~~l~l~~-----gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~ 231 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTD-----DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH 231 (438)
T ss_dssp THHHHHHHHHHHHCCCT-----TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred CCHHHHHHHHHhcCCCC-----CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34456777777777765 899999999999999999987755 5999999999999998754 33454 2
Q ss_pred CCeEEEEccCCCCCCCC--CcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCC
Q 016981 208 DKVSFQVGDALQQPFPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (379)
Q Consensus 208 ~~i~~~~~d~~~~~~~~--~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 267 (379)
.++.|+++|+.++++.+ ..||+|+++.++ +.++....|.+++++|||||+|++.+...+
T Consensus 232 ~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 232 AEYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CEEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CCeEEEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 58999999999987643 479999987765 457788999999999999999999875544
No 116
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.67 E-value=5.6e-16 Score=139.63 Aligned_cols=136 Identities=18% Similarity=0.291 Sum_probs=112.6
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
..++..+...+ +.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.|+++++..++++++.+..+|+.+.
T Consensus 83 ~~i~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 83 ALIVAYAGISP-----GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HHHHHhhCCCC-----CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 34555555554 8999999999999999999984 6799999999999999999999988876799999999864
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
+++++||+|++ +.+++..+++++.++|||||++++..... . ...
T Consensus 158 -~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---------------~---------------~~~ 201 (255)
T 3mb5_A 158 -IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS---------------N---------------QVM 201 (255)
T ss_dssp -CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH---------------H---------------HHH
T ss_pred -cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH---------------H---------------HHH
Confidence 66788999997 46778889999999999999999876321 0 245
Q ss_pred HHHHHHHhCC--CceeEEEec
Q 016981 301 DYVKLLQSLS--LEDIKAEDW 319 (379)
Q Consensus 301 ~~~~~l~~aG--F~~v~~~~~ 319 (379)
++.+.|+++| |..+++...
T Consensus 202 ~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 202 RLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp HHHHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHHHcCCCccccEEEEE
Confidence 6778899999 998877543
No 117
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=1.4e-16 Score=137.77 Aligned_cols=107 Identities=17% Similarity=0.219 Sum_probs=91.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-CCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~V~~~~~ 235 (379)
+.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++++..++.+++.++++|+.+++ +.+++||+|++...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 7899999999999999999985 36999999999999999999999887678999999998875 55689999998865
Q ss_pred cCC------CC---CHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 236 GEH------MP---DKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 236 l~~------~~---~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+.. .. +...+++++.++|||||++++..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 511 11 3357999999999999999998754
No 118
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.67 E-value=5.4e-16 Score=131.14 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=99.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. + +|+|+|+|+.|++. .+++.+.++|+.+ ++++++||+|+++..+++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPYVP 90 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBT
T ss_pred CCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCCcc
Confidence 679999999999999999987 4 99999999999987 2578999999987 566689999999988887
Q ss_pred CCCH---------HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 016981 239 MPDK---------SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (379)
Q Consensus 239 ~~~~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 309 (379)
.++. ..+++++.+.| |||++++..... ...+++.++++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------~~~~~l~~~l~~~ 139 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------NRPKEVLARLEER 139 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------------GCHHHHHHHHHHT
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------------CCHHHHHHHHHHC
Confidence 6544 67899999999 999999977321 1467899999999
Q ss_pred CCceeEEEecCC
Q 016981 310 SLEDIKAEDWSQ 321 (379)
Q Consensus 310 GF~~v~~~~~~~ 321 (379)
||+.+.+.....
T Consensus 140 gf~~~~~~~~~~ 151 (170)
T 3q87_B 140 GYGTRILKVRKI 151 (170)
T ss_dssp TCEEEEEEEEEC
T ss_pred CCcEEEEEeecc
Confidence 999887765443
No 119
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.67 E-value=2.5e-16 Score=141.93 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=104.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC---CCC---CCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFP---DGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~---~~~fD~V 230 (379)
++.+|||+|||+|.++..++.+. +.+|+|+|+|+.|++.|++++...++.+++.++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 37799999999999999998876 7899999999999999999999988876799999998762 444 2689999
Q ss_pred EeccccCCCC---------------CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC---
Q 016981 231 WSMESGEHMP---------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY--- 292 (379)
Q Consensus 231 ~~~~~l~~~~---------------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 292 (379)
+++-.+++.. ....++.+++++|||||.+.+.+.. .............
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~--------------~~~~~~~l~~~g~~~~ 210 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI--------------IHDSLQLKKRLRWYSC 210 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHH--------------HHHHHHHGGGBSCEEE
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH--------------HHHHHhcccceEEEEE
Confidence 9985554432 1134678899999999998775421 0011111111111
Q ss_pred -CCCCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 293 -LPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 293 -~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
.......+++.++|+++||+.+++..+.
T Consensus 211 ~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 211 MLGKKCSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp EESSTTSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred CCCChhHHHHHHHHHHHcCCCceEEEEEe
Confidence 1112345889999999999998876654
No 120
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.67 E-value=2.9e-16 Score=141.62 Aligned_cols=123 Identities=20% Similarity=0.295 Sum_probs=103.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++. +.+..+|+.+. +++++||+|+++...++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPFGPFDLLVANLYAEL 196 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGGCCEEEEEEECCHHH
T ss_pred CCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcCCCCCEEEECCcHHH
Confidence 789999999999999998886 569999999999999999999988764 89999988663 44678999999765543
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEe
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 318 (379)
...++.++.++|||||+++++++... ..+++.+.++++||++++...
T Consensus 197 ---~~~~l~~~~~~LkpgG~lils~~~~~------------------------------~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 197 ---HAALAPRYREALVPGGRALLTGILKD------------------------------RAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEEEGG------------------------------GHHHHHHHHHHTTCEEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEeeccC------------------------------CHHHHHHHHHHCCCEEEEEec
Confidence 37899999999999999999874321 366789999999999987754
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.67 E-value=6.2e-16 Score=139.42 Aligned_cols=135 Identities=14% Similarity=0.203 Sum_probs=111.3
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEccCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQ 219 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~ 219 (379)
..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|+++++.. + .+++.+..+|+.+
T Consensus 86 ~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 86 SAMVTLLDLAP-----GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGG
T ss_pred HHHHHHcCCCC-----CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhh
Confidence 45556655554 8899999999999999999984 579999999999999999999877 6 4689999999988
Q ss_pred CCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCH
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
.++++++||+|++ +.+++..+++++.++|||||++++..... . ..
T Consensus 160 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---------------~---------------~~ 204 (258)
T 2pwy_A 160 AELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNI---------------T---------------QV 204 (258)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCH---------------H---------------HH
T ss_pred cCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH---------------H---------------HH
Confidence 8777789999997 45677899999999999999999987321 0 13
Q ss_pred HHHHHHHHhCCCceeEEEe
Q 016981 300 ADYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 300 ~~~~~~l~~aGF~~v~~~~ 318 (379)
.++.+.|+++||..+++.+
T Consensus 205 ~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 205 LELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 4566778889999877654
No 122
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=8e-16 Score=132.08 Aligned_cols=118 Identities=14% Similarity=0.147 Sum_probs=98.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~ 219 (379)
....+++.+...+ +.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++.. ++.+..+|+.+
T Consensus 40 ~~~~l~~~~~~~~-----~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 40 GTKILVENVVVDK-----DDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHCCCCT-----TCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred HHHHHHHHcccCC-----CCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc
Confidence 3445556655443 889999999999999999988 8899999999999999999998887743 39999999877
Q ss_pred CCCCCCcccEEEeccccCCC-CCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 220 QPFPDGQFDLVWSMESGEHM-PDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
. +++++||+|++...+++. .+...+++++.++|||||.+++....
T Consensus 114 ~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 114 N-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp T-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred c-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 3 446789999998887763 45679999999999999999998753
No 123
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.67 E-value=9.2e-16 Score=134.03 Aligned_cols=112 Identities=17% Similarity=0.181 Sum_probs=97.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
....+++.+...+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+++ ++.+..+|+.+.
T Consensus 65 ~~~~~~~~l~~~~-----~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 65 MVARMTELLELTP-----QSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 4455566666554 899999999999999999998 789999999999999999999988874 899999999887
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+..+++||+|++..+++|+++ ++.++|||||++++....
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 666789999999999999976 588999999999997643
No 124
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=1.8e-15 Score=128.74 Aligned_cols=132 Identities=17% Similarity=0.160 Sum_probs=107.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
+...+++.+...+ +.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.+++++...++ +++.+..+|+.+
T Consensus 23 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~- 94 (183)
T 2yxd_A 23 IRAVSIGKLNLNK-----DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-
T ss_pred HHHHHHHHcCCCC-----CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-
Confidence 3344455555443 78999999999999999998 478999999999999999999998887 579999999887
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++++++||+|++..+ .+...+++++.++ |||.+++...... ...
T Consensus 95 ~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~------------------------------~~~ 138 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE------------------------------NAA 138 (183)
T ss_dssp HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH------------------------------HHH
T ss_pred cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc------------------------------cHH
Confidence 666689999999888 6778999999998 9999999873210 245
Q ss_pred HHHHHHHhCCCceeEE
Q 016981 301 DYVKLLQSLSLEDIKA 316 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~ 316 (379)
++.+.|+++||....+
T Consensus 139 ~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 139 KIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCeEEEE
Confidence 6788999999865544
No 125
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.66 E-value=2.7e-16 Score=141.33 Aligned_cols=132 Identities=13% Similarity=0.006 Sum_probs=107.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC---CCcccEEEec
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP---DGQFDLVWSM 233 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~V~~~ 233 (379)
++.+|||||||+|..+..++... +.+|+++|+|+.+++.|+++++..++. ++.++++|+++++.. .++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEEC
Confidence 47899999999999999999886 679999999999999999999998884 699999999887542 4789999987
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCce
Q 016981 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (379)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 313 (379)
. +.+...+++.+.++|||||++++..-... .. ...++.+.+++.||..
T Consensus 159 a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~-------------~~---------------e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 159 A----VAPLCVLSELLLPFLEVGGAAVAMKGPRV-------------EE---------------ELAPLPPALERLGGRL 206 (249)
T ss_dssp S----SCCHHHHHHHHGGGEEEEEEEEEEECSCC-------------HH---------------HHTTHHHHHHHHTEEE
T ss_pred C----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc-------------HH---------------HHHHHHHHHHHcCCeE
Confidence 4 35678999999999999999988651100 00 1234667788899999
Q ss_pred eEEEecCCC
Q 016981 314 IKAEDWSQN 322 (379)
Q Consensus 314 v~~~~~~~~ 322 (379)
+++..+..+
T Consensus 207 ~~~~~~~~p 215 (249)
T 3g89_A 207 GEVLALQLP 215 (249)
T ss_dssp EEEEEEECT
T ss_pred EEEEEeeCC
Confidence 988877554
No 126
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.66 E-value=4.3e-16 Score=142.20 Aligned_cols=133 Identities=15% Similarity=0.216 Sum_probs=107.0
Q ss_pred HHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEccCCCC
Q 016981 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQ 220 (379)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~i~~~~~d~~~~ 220 (379)
.++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+|+|+++.+++.|++++... +. +++.+..+|+.+
T Consensus 101 ~~~~~~~~~~-----~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~- 173 (275)
T 1yb2_A 101 YIIMRCGLRP-----GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD- 173 (275)
T ss_dssp -----CCCCT-----TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-
T ss_pred HHHHHcCCCC-----cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-
Confidence 3444444443 8899999999999999999873 679999999999999999999877 64 589999999987
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
++++++||+|++ +++++..+++++.++|||||++++.+... . ..+
T Consensus 174 ~~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~---------------~---------------~~~ 218 (275)
T 1yb2_A 174 FISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF---------------D---------------QSE 218 (275)
T ss_dssp CCCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH---------------H---------------HHH
T ss_pred cCcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH---------------H---------------HHH
Confidence 566788999998 67788899999999999999999987321 0 134
Q ss_pred HHHHHHHhCCCceeEEEe
Q 016981 301 DYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~ 318 (379)
++.+.|+++||..+++..
T Consensus 219 ~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 219 KTVLSLSASGMHHLETVE 236 (275)
T ss_dssp HHHHHSGGGTEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEE
Confidence 677788899999888765
No 127
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.66 E-value=1.7e-15 Score=152.54 Aligned_cols=105 Identities=22% Similarity=0.296 Sum_probs=92.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHc------CCCCCeEEEEccCCCCCCCCCcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAAR------GLADKVSFQVGDALQQPFPDGQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~------~~~~~i~~~~~d~~~~~~~~~~fD~V 230 (379)
+.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++... +. .++.|.++|+.++++.+++||+|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCeeEE
Confidence 88999999999999999998752 79999999999999999977643 33 47999999999999888999999
Q ss_pred EeccccCCCCCHH--HHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++..+++|++++. .++++++++|||| .+++.+..
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999999998865 5899999999999 87777643
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.65 E-value=1.1e-15 Score=139.73 Aligned_cols=128 Identities=17% Similarity=0.089 Sum_probs=105.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.+++.+.++|+.+.+. +++||+|++...
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p--- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV--- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC---
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc---
Confidence 8899999999999999999985337999999999999999999999887679999999998865 688999998533
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
.+...++.++.++|||||++++.+........ -...+.+.+.++++||+...
T Consensus 202 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------------------~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 -VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp -SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTTCEEEE
T ss_pred -hhHHHHHHHHHHHCCCCeEEEEEEeecccccc------------------------ccHHHHHHHHHHHcCCeeEE
Confidence 34478899999999999999998864321000 11466788999999998765
No 129
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=9.8e-17 Score=140.27 Aligned_cols=142 Identities=16% Similarity=0.141 Sum_probs=91.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC
Q 016981 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (379)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 217 (379)
..+++.+++.+... .++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+. ++++.++|+
T Consensus 15 ~~~~~~~~~~l~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 88 (215)
T 4dzr_A 15 EVLVEEAIRFLKRM----PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHTTC----CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHH
T ss_pred HHHHHHHHHHhhhc----CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcch
Confidence 34556666665431 138899999999999999999987 56999999999999999999887765 788999998
Q ss_pred CCCCCCC-----CcccEEEeccccCCCCCH--------------------------HHHHHHHHHhcCCCCEEEEEeccC
Q 016981 218 LQQPFPD-----GQFDLVWSMESGEHMPDK--------------------------SKFVSELARVTAPAGTIIIVTWCH 266 (379)
Q Consensus 218 ~~~~~~~-----~~fD~V~~~~~l~~~~~~--------------------------~~~l~~~~r~LkpgG~l~i~~~~~ 266 (379)
.+ ++++ ++||+|+++-.+.+..+. ..+++++.++|||||++++.+..
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~- 166 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG- 166 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT-
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC-
Confidence 77 5544 899999997554333221 67888999999999995555421
Q ss_pred CCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH--hCCCceeEEE
Q 016981 267 RDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ--SLSLEDIKAE 317 (379)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aGF~~v~~~ 317 (379)
....+.+.++++ ++||..+.+.
T Consensus 167 -----------------------------~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 167 -----------------------------HNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp -----------------------------TSCHHHHHHHTGGGGGGTEECCEE
T ss_pred -----------------------------CccHHHHHHHHHHhhcCCceEEEE
Confidence 114567888888 8999877654
No 130
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.65 E-value=9.3e-16 Score=137.75 Aligned_cols=163 Identities=13% Similarity=0.167 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcc--cHHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE
Q 016981 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI--GGSSRYLAKK-F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQ 213 (379)
Q Consensus 138 ~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGt--G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~ 213 (379)
....+.+.++.+.... ...+|||||||+ +..+..++.+ . +++|+++|.|+.|++.|++++...+ ..++.|+
T Consensus 62 nr~fl~rav~~l~~~~----g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v 136 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEA----GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYV 136 (277)
T ss_dssp HHHHHHHHHHHHHHTS----CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEE
T ss_pred HHHHHHHHHHHhcccc----CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEE
Confidence 3445555555553211 147899999997 4344555544 3 6899999999999999999886432 2479999
Q ss_pred EccCCCCC----CC--CCccc-----EEEeccccCCCCC---HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchH
Q 016981 214 VGDALQQP----FP--DGQFD-----LVWSMESGEHMPD---KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPW 279 (379)
Q Consensus 214 ~~d~~~~~----~~--~~~fD-----~V~~~~~l~~~~~---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 279 (379)
++|+.+.+ .+ .+.|| .|+++.+|||+++ +..+++++++.|+|||+|++++.+.+.. + . .
T Consensus 137 ~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~-p--~----~ 209 (277)
T 3giw_A 137 EADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA-P--Q----E 209 (277)
T ss_dssp ECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTS-H--H----H
T ss_pred EecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCC-H--H----H
Confidence 99998752 11 24455 5889999999987 5789999999999999999998765421 1 1 0
Q ss_pred HHHHHHHHhhccCCC-CCCCHHHHHHHHHhCCCceeE
Q 016981 280 EQELLKKICDAYYLP-AWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~aGF~~v~ 315 (379)
. ..+.........+ .+.+.+++..+|. ||+.++
T Consensus 210 ~-~~~~~~~~~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 210 V-GRVAREYAARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp H-HHHHHHHHHTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred H-HHHHHHHHhcCCCCccCCHHHHHHHhC--CCcccC
Confidence 1 1111222222222 3579999999994 998653
No 131
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.64 E-value=1.8e-16 Score=133.71 Aligned_cols=102 Identities=11% Similarity=0.175 Sum_probs=88.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..++... +++|+++|+|+.|++.++++++..|+..++++ .|.... .+.++||+|++..++|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhHHH
Confidence 7899999999999999998766 67999999999999999999999887556666 565443 3468899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
++++.+..+.++++.|||||.++-..
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99666778889999999999988766
No 132
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.64 E-value=1.5e-15 Score=142.77 Aligned_cols=101 Identities=23% Similarity=0.232 Sum_probs=90.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc---c
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME---S 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~---~ 235 (379)
+.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.+++.++.+|+.++++++++||+|++.. .
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 143 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYF 143 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTT
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhh
Confidence 789999999999999999987335999999997 999999999998887799999999999888888999999876 4
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEE
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTII 260 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~ 260 (379)
+.+..+...++.++.++|||||.++
T Consensus 144 l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 144 LLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 5555667889999999999999987
No 133
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.64 E-value=1e-15 Score=145.09 Aligned_cols=147 Identities=19% Similarity=0.264 Sum_probs=110.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ . +++++..+|+.+ +++ .||+|++..+++
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKWVLH 262 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEccccc
Confidence 6899999999999999999987 679999999 788877654 2 469999999987 665 499999999999
Q ss_pred CCCCHH--HHHHHHHHhcCC---CCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 016981 238 HMPDKS--KFVSELARVTAP---AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (379)
Q Consensus 238 ~~~~~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 312 (379)
|+++.. .+|++++++||| ||++++.++..+....... . ......+.-..........++.++|.++|+++||+
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~-~-~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 340 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG-L-TELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFS 340 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHH-H-HHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccch-h-hhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCC
Confidence 999876 999999999999 9999999876543221100 0 01111111100000011245899999999999999
Q ss_pred eeEEEe
Q 016981 313 DIKAED 318 (379)
Q Consensus 313 ~v~~~~ 318 (379)
++++..
T Consensus 341 ~~~~~~ 346 (358)
T 1zg3_A 341 SYKITP 346 (358)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 998865
No 134
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.64 E-value=2.9e-16 Score=137.29 Aligned_cols=105 Identities=22% Similarity=0.290 Sum_probs=91.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++... .+++.+..+|+.++++++++||+|++..+++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 3789999999999999999987433899999999999999998753 2479999999999888888999999988886
Q ss_pred CCC---------------CHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 238 HMP---------------DKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 238 ~~~---------------~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++. +...+++++.++|||||++++.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 654 5588999999999999999998853
No 135
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.64 E-value=1.8e-15 Score=131.86 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=87.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..++... +.+|+|+|+|+.+++.+++++...++. ++.+..+|+.+.+ +.++||+|+++.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-ccCCcCEEEEec---
Confidence 6799999999999999999876 679999999999999999999988774 5999999998875 457899999754
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+.+...+++++.++|+|||++++..
T Consensus 141 -~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 -FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred -cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3567899999999999999999874
No 136
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=9.9e-16 Score=137.78 Aligned_cols=113 Identities=14% Similarity=0.109 Sum_probs=86.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ- 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~- 219 (379)
.+..+++.+++.+ +.+|||+|||+|.++..++++ +.+|+|+|+|+.|++.|++++... .+.....++..
T Consensus 33 ~~~~il~~l~l~~-----g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~ 102 (261)
T 3iv6_A 33 DRENDIFLENIVP-----GSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHHTTTCCT-----TCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeecccc
Confidence 4455666666554 889999999999999999987 789999999999999999987543 12222222211
Q ss_pred -CCCCCCcccEEEeccccCCCC--CHHHHHHHHHHhcCCCCEEEEEec
Q 016981 220 -QPFPDGQFDLVWSMESGEHMP--DKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 220 -~~~~~~~fD~V~~~~~l~~~~--~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
....+++||+|++..+++|+. +...+++++.++| |||+++++..
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 111257899999999999985 4467999999999 9999999863
No 137
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.63 E-value=2.3e-15 Score=137.47 Aligned_cols=135 Identities=20% Similarity=0.268 Sum_probs=110.5
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.|+++++..++.+++.+..+|+.+.
T Consensus 102 ~~i~~~~~~~~-----~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 102 SFIAMMLDVKE-----GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHhCCCC-----CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 44555555554 8899999999999999999984 5799999999999999999999888766899999998876
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
+++++||+|++ +.+++..+++++.++|+|||++++..... . ...
T Consensus 177 -~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~---------------~---------------~~~ 220 (277)
T 1o54_A 177 -FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTT---------------N---------------QVQ 220 (277)
T ss_dssp -CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSH---------------H---------------HHH
T ss_pred -ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCH---------------H---------------HHH
Confidence 55678999997 45677899999999999999999987321 0 134
Q ss_pred HHHHHHHhCCCceeEEEe
Q 016981 301 DYVKLLQSLSLEDIKAED 318 (379)
Q Consensus 301 ~~~~~l~~aGF~~v~~~~ 318 (379)
++.+.|+++||..+++..
T Consensus 221 ~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 221 ETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp HHHHHHHHSSEEEEEEEC
T ss_pred HHHHHHHHCCCceeEEEE
Confidence 566788889999887653
No 138
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.63 E-value=1.7e-15 Score=142.82 Aligned_cols=102 Identities=25% Similarity=0.246 Sum_probs=91.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC-
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE- 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~- 237 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+ +++.|+++++..++.+++.++.+|++++++++++||+|++..+.+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 789999999999999999987434999999994 999999999999987789999999999988889999999976544
Q ss_pred --CCCCHHHHHHHHHHhcCCCCEEEE
Q 016981 238 --HMPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 238 --~~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
+..+...++.++.++|||||+++.
T Consensus 146 l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 146 LFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 447789999999999999999874
No 139
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.63 E-value=2.8e-15 Score=142.63 Aligned_cols=103 Identities=22% Similarity=0.288 Sum_probs=92.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ +++++.+|+.+.+.++++||+|+++..++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccccCCCeEEEEECCchh
Confidence 3789999999999999999997 78999999999999999999998875 48999999998876668999999998888
Q ss_pred C-----CCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 238 H-----MPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~-----~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+ ..+...+++++.++|||||.++++.
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 7 3455789999999999999999976
No 140
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.62 E-value=4.2e-15 Score=132.13 Aligned_cols=104 Identities=22% Similarity=0.264 Sum_probs=90.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-CCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~~~fD~V~~~~~ 235 (379)
+.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|+++++..++.+++.++.+|+.+. + ..+++||+|++...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 7899999999999999999955 7899999999999999999999998877999999999774 3 33689999997643
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
..+...+++++.++|||||++++.+..
T Consensus 152 ---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 152 ---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 455688999999999999999886643
No 141
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.62 E-value=8.5e-16 Score=130.49 Aligned_cols=113 Identities=14% Similarity=0.116 Sum_probs=93.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC---CCCcccEEEecc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---PDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~fD~V~~~~ 234 (379)
++.+|||+|||+ +++|+|+.|++.|+++.. .++.+.++|+.++++ ++++||+|++..
T Consensus 12 ~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 12 AGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp TTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 489999999996 239999999999998753 358999999998876 789999999999
Q ss_pred ccCCC-CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCC
Q 016981 235 SGEHM-PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSL 311 (379)
Q Consensus 235 ~l~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 311 (379)
+++|+ +++..++++++|+|||||++++......... ... ...+.+++.++|+++||
T Consensus 72 ~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~------------------~~~---~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 72 VPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD------------------NNS---KVKTASKLCSALTLSGL 128 (176)
T ss_dssp STTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC------------------SSS---SSCCHHHHHHHHHHTTC
T ss_pred hhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc------------------ccc---ccCCHHHHHHHHHHCCC
Confidence 99999 9999999999999999999999653221100 011 12478999999999999
No 142
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=1.3e-15 Score=132.41 Aligned_cols=106 Identities=15% Similarity=0.063 Sum_probs=89.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEccCCCCC--CCCCc-ccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP--FPDGQ-FDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~-fD~V~~~~ 234 (379)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++. +++.+..+|+.+.. +++++ ||+|++..
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 7899999999999999877764469999999999999999999988874 58999999987753 23578 99999987
Q ss_pred ccCCCCCHHHHHHHH--HHhcCCCCEEEEEecc
Q 016981 235 SGEHMPDKSKFVSEL--ARVTAPAGTIIIVTWC 265 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~--~r~LkpgG~l~i~~~~ 265 (379)
.+ +..+...+++.+ .++|||||.+++....
T Consensus 134 ~~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 134 PF-HFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CS-SSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CC-CCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 74 356678889999 6789999999987743
No 143
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.61 E-value=4e-15 Score=130.66 Aligned_cols=126 Identities=13% Similarity=0.085 Sum_probs=105.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|+++++.+++.+++.+..+|..+...+++.||+|+..++.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 37899999999999999999975 45899999999999999999999999888999999988765444479998866554
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
.. -...++.+..+.|+++|+|+++... ..+.++++|.+.||.+++.
T Consensus 101 g~--lI~~IL~~~~~~l~~~~~lIlqp~~--------------------------------~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 101 GR--LIADILNNDIDKLQHVKTLVLQPNN--------------------------------REDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp HH--HHHHHHHHTGGGGTTCCEEEEEESS--------------------------------CHHHHHHHHHHTTEEEEEE
T ss_pred hH--HHHHHHHHHHHHhCcCCEEEEECCC--------------------------------ChHHHHHHHHHCCCEEEEE
Confidence 42 2367888999999999999987621 3678899999999998876
Q ss_pred E
Q 016981 317 E 317 (379)
Q Consensus 317 ~ 317 (379)
.
T Consensus 147 ~ 147 (230)
T 3lec_A 147 D 147 (230)
T ss_dssp E
T ss_pred E
Confidence 5
No 144
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.61 E-value=4.4e-15 Score=129.90 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=80.1
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC----CCCCCcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ----PFPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~fD~V~~ 232 (379)
++.+|||+|||+|.++..+++.. +.+|+|+|+|+.|++.+.++.+.. .++.++.+|+... ++. ++||+|++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 48899999999999999999886 369999999999887776666543 4788999998763 444 78999998
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.. ..+ .+...++++++++|||||++++..
T Consensus 133 ~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DI-AQK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC-CST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ec-cCh-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 72 222 223456999999999999999974
No 145
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.61 E-value=2.5e-15 Score=141.06 Aligned_cols=157 Identities=17% Similarity=0.173 Sum_probs=89.8
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcC----------CCCCe
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARG----------LADKV 210 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----------~~~~i 210 (379)
..++..+.+.+ +.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|++++...+ ...++
T Consensus 95 ~~~l~~l~~~~-----g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v 169 (336)
T 2b25_A 95 NMILSMMDINP-----GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169 (336)
T ss_dssp HHHHHHHTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred HHHHHhcCCCC-----CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce
Confidence 33444445544 88999999999999999999753 799999999999999999987632 23589
Q ss_pred EEEEccCCCC--CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHh
Q 016981 211 SFQVGDALQQ--PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC 288 (379)
Q Consensus 211 ~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (379)
.+..+|+.+. ++++++||+|++.. +++..++.++.++|||||++++...... .. ...+..+.
T Consensus 170 ~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~-------~~----~~~~~~l~ 233 (336)
T 2b25_A 170 DFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNIT-------QV----IELLDGIR 233 (336)
T ss_dssp EEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHH-------HH----HHHHHHHH
T ss_pred EEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHH-------HH----HHHHHHHH
Confidence 9999999886 45667899999843 3445589999999999999998774211 11 11222111
Q ss_pred hc---c--------CCCCC------CCHHHHHHHHHhCCCceeEEEecC
Q 016981 289 DA---Y--------YLPAW------CSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 289 ~~---~--------~~~~~------~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
.. + ....| ....++.+.|+++||+++++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 234 TCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp HHTCCEEEEEEECCCCCCEEECC--------------------------
T ss_pred hcCCCcccceEEEecccceEEEeecccccchhhhhcccccccccccccc
Confidence 10 0 00011 011278999999999999887654
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=2.1e-15 Score=132.99 Aligned_cols=106 Identities=18% Similarity=0.240 Sum_probs=90.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CCC-C----CCcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPF-P----DGQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~-~----~~~fD~V 230 (379)
+.+|||+|||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.++++++.+|+.+ ++. . .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 7899999999999999999865 679999999999999999999998887789999999855 232 2 2689999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++....++..+...++..+ ++|||||++++.+..
T Consensus 139 ~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9988777765556777777 999999999886643
No 147
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.61 E-value=3.8e-15 Score=141.86 Aligned_cols=104 Identities=24% Similarity=0.257 Sum_probs=91.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++....+|+|+|+| .|++.|+++++..++.+++.++.+|+++++++ ++||+|++..+.+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 488999999999999999998733499999999 99999999999999888899999999998876 8999999966555
Q ss_pred CC---CCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 238 HM---PDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~~---~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
++ .+...++.++.++|||||.+++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 54 457889999999999999998754
No 148
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.61 E-value=1.4e-14 Score=130.00 Aligned_cols=104 Identities=21% Similarity=0.289 Sum_probs=89.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCC--CCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP--DGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~fD~V~~~ 233 (379)
+.+|||||||+|..+..+++.+ +.+|+++|+|+.+++.|+++++..++.+++++..+|+.+. +.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 7899999999999999999976 5799999999999999999999999877999999998763 322 3489999986
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.. ..+...+++++.++|||||+|++.+..
T Consensus 144 ~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 144 AD---KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SC---GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred Cc---hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 43 345578999999999999999987754
No 149
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.61 E-value=7.2e-15 Score=136.82 Aligned_cols=113 Identities=15% Similarity=0.266 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 217 (379)
..+..+++.+.+.+ +.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++...+++ ++.+..+|+
T Consensus 62 ~~~~~l~~~l~~~~-----~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~ 135 (317)
T 1dl5_A 62 SLMALFMEWVGLDK-----GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDG 135 (317)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG
T ss_pred HHHHHHHHhcCCCC-----cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECCh
Confidence 35556666666554 89999999999999999998752 56999999999999999999988874 699999999
Q ss_pred CCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 218 LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.+.+.++++||+|++..+++|+. +++.++|||||++++...
T Consensus 136 ~~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 136 YYGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred hhccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 88654568899999999999986 578899999999999864
No 150
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.61 E-value=3.1e-15 Score=127.91 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=89.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~~~~ 234 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.+++.++.+|+.+.. ..+++||+|++..
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 789999999999999998886446999999999999999999998887668999999987631 2267899999987
Q ss_pred ccCCCCCHHHHHHHH--HHhcCCCCEEEEEeccC
Q 016981 235 SGEHMPDKSKFVSEL--ARVTAPAGTIIIVTWCH 266 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~--~r~LkpgG~l~i~~~~~ 266 (379)
.++ ..+....+..+ .++|||||.+++.....
T Consensus 125 ~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 125 PYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 743 45667788888 89999999999876443
No 151
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.61 E-value=3e-15 Score=133.30 Aligned_cols=104 Identities=21% Similarity=0.372 Sum_probs=84.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH------cCCCCCeEEEEccCCC-CC--CCCCccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA------RGLADKVSFQVGDALQ-QP--FPDGQFD 228 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~------~~~~~~i~~~~~d~~~-~~--~~~~~fD 228 (379)
+.+|||||||+|.++..+++.. +..|+|+|+|+.|++.|++++.. .+. .|+.++.+|+.+ ++ +++++||
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcCee
Confidence 6799999999999999999887 67999999999999999988764 233 589999999987 55 7789999
Q ss_pred EEEeccccCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 229 LVWSMESGEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 229 ~V~~~~~l~~~~~--------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.|++...-.+... ...++++++++|||||.|++..
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 9987544333211 1479999999999999999875
No 152
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.60 E-value=6.4e-15 Score=134.56 Aligned_cols=113 Identities=16% Similarity=0.238 Sum_probs=96.6
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-C-CCCCeEEEEccC
Q 016981 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-G-LADKVSFQVGDA 217 (379)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~-~~~~i~~~~~d~ 217 (379)
+..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|+++++.. + +.+++.+..+|+
T Consensus 88 ~~~i~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 88 AAQIVHEGDIFP-----GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHcCCCC-----CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 345566666554 8899999999999999999864 579999999999999999999876 4 446899999999
Q ss_pred CCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 218 LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.+.++++++||+|++ +++++..+++++.++|||||++++...
T Consensus 163 ~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 163 ADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred HhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 988777789999998 456778999999999999999999873
No 153
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.60 E-value=4.1e-15 Score=131.13 Aligned_cols=119 Identities=13% Similarity=0.204 Sum_probs=96.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEc
Q 016981 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVG 215 (379)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~i~~~~~ 215 (379)
..++..++...+.. ++.+|||+|||+|..+..+++.+ +++|+++|+|+.+++.|+++++..++. ++++++.+
T Consensus 42 ~~~l~~l~~~~~~~-----~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 42 GQLLTTLAATTNGN-----GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp HHHHHHHHHHSCCT-----TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred HHHHHHHHHhhCCC-----CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 34555555554322 24599999999999999999976 679999999999999999999999987 68999999
Q ss_pred cCCCC-C-CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 216 DALQQ-P-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 216 d~~~~-~-~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+.+. + +++++||+|++... ..+...+++++.++|||||++++.+..
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred CHHHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 98764 2 43689999998653 345578999999999999999986643
No 154
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=9.9e-15 Score=127.89 Aligned_cols=112 Identities=21% Similarity=0.318 Sum_probs=93.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
....+++.+...+ +.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.+++++...++ +++.+..+|+.
T Consensus 65 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~ 138 (215)
T 2yxe_A 65 MVGMMCELLDLKP-----GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGG
T ss_pred HHHHHHHhhCCCC-----CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcc
Confidence 4445555555444 88999999999999999999864 7999999999999999999988776 46999999985
Q ss_pred CCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.....+++||+|++..+++|+. +++.++|||||++++...
T Consensus 139 ~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred cCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEEC
Confidence 4322357899999999999986 488999999999999864
No 155
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=1.2e-15 Score=129.64 Aligned_cols=120 Identities=13% Similarity=0.048 Sum_probs=94.2
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
..+.+++.+. .. ++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++..++.+++.+..+|+.+
T Consensus 18 ~~~~~~~~l~~~~-----~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 18 VRGAIFNMIGPYF-----NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp CHHHHHHHHCSCC-----CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhc-----CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 4444555544 22 37899999999999999999874469999999999999999999988876689999999877
Q ss_pred C-CCCCCcccEEEeccccCCCCCHHHHHHHHH--HhcCCCCEEEEEeccC
Q 016981 220 Q-PFPDGQFDLVWSMESGEHMPDKSKFVSELA--RVTAPAGTIIIVTWCH 266 (379)
Q Consensus 220 ~-~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~--r~LkpgG~l~i~~~~~ 266 (379)
. +..+++||+|++...++ ......+++.+. ++|||||.+++.....
T Consensus 93 ~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 93 AIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 3 43346799999976542 234467777777 9999999999987543
No 156
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=4e-15 Score=129.40 Aligned_cols=104 Identities=12% Similarity=0.023 Sum_probs=88.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..++.+...+|+|+|+|+.+++.|+++++..++ ++++++++|+.+ ++..+++||+|++...+
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~- 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF- 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC-
Confidence 789999999999999988876445999999999999999999998887 689999999877 45556789999987663
Q ss_pred CCCCHHHHHHHHHH--hcCCCCEEEEEec
Q 016981 238 HMPDKSKFVSELAR--VTAPAGTIIIVTW 264 (379)
Q Consensus 238 ~~~~~~~~l~~~~r--~LkpgG~l~i~~~ 264 (379)
+..+...+++.+.+ +|||||.+++...
T Consensus 133 ~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 45677888888876 5999999998764
No 157
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.60 E-value=1.2e-14 Score=135.90 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=89.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccc---
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES--- 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~--- 235 (379)
+.+|||+|||+|.++..+++....+|+|+|+| .+++.|+++++..++.+++.++.+|+.++++++++||+|++..+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 78999999999999999998733499999999 59999999999998888899999999998887789999998754
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEE
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
+.+..+...++.++.++|||||.++.
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 118 LLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 34456678999999999999999874
No 158
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.60 E-value=6.9e-15 Score=141.14 Aligned_cols=120 Identities=15% Similarity=0.183 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHH-------HHHHHHcCCC-CCe
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRA-------NALAAARGLA-DKV 210 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a-------~~~~~~~~~~-~~i 210 (379)
..+..+++.+.+.. +.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.| ++++...|+. .++
T Consensus 229 ~~v~~ml~~l~l~~-----g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 229 NFLSDVYQQCQLKK-----GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHhcCCCC-----CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 35566777766654 89999999999999999999764 5899999999999998 8888887753 689
Q ss_pred EEEEccCCCC--CC--CCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 211 SFQVGDALQQ--PF--PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 211 ~~~~~d~~~~--~~--~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.+.++|.... ++ ..++||+|+++.++ +.++...+|+++.++|||||++++.+..
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred EEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 9998764432 22 24789999987766 4467788999999999999999998643
No 159
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.60 E-value=1.5e-14 Score=132.26 Aligned_cols=134 Identities=12% Similarity=0.037 Sum_probs=98.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHH-----HHcCCC----CCeEEEEccCCCCC--C----
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITL-SPVQAQRANALA-----AARGLA----DKVSFQVGDALQQP--F---- 222 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~-s~~~~~~a~~~~-----~~~~~~----~~i~~~~~d~~~~~--~---- 222 (379)
+.+|||+|||+|.++..+++....+|+|+|+ |+.+++.|++++ +..++. +++.+...|..+.. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 159 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT 159 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc
Confidence 7899999999999999988863339999999 899999999998 555543 46888876654421 1
Q ss_pred CCCcccEEEeccccCCCCCHHHHHHHHHHhcC---C--CCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016981 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTA---P--AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
++++||+|++..+++|.++...+++.+.++|| | ||.+++....... .+ ..
T Consensus 160 ~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~--------------~~-----------~~ 214 (281)
T 3bzb_A 160 GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRP--------------HL-----------AE 214 (281)
T ss_dssp SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------------------------------
T ss_pred cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec--------------cc-----------ch
Confidence 35789999999999999999999999999999 9 9988775321100 00 00
Q ss_pred CHHHHHHHHHhCC-CceeEEE
Q 016981 298 STADYVKLLQSLS-LEDIKAE 317 (379)
Q Consensus 298 ~~~~~~~~l~~aG-F~~v~~~ 317 (379)
...++.+.++++| |++..+.
T Consensus 215 ~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 215 RDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp -CTHHHHHHHHSTTEEEEEEE
T ss_pred hHHHHHHHHHhcCCEEEEEec
Confidence 1245667889999 9987764
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.60 E-value=6.4e-15 Score=130.95 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=82.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC---CCCCCCcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ---QPFPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~---~~~~~~~fD~V~~ 232 (379)
++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+.++++.. .++.+..+|+.+ +++.+++||+|++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 48899999999999999999986 379999999999988888877664 589999999987 3445689999998
Q ss_pred ccccCCCCCH-HHHHHHHHHhcCCCCEEEEEe
Q 016981 233 MESGEHMPDK-SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~~~~~-~~~l~~~~r~LkpgG~l~i~~ 263 (379)
... .++. ..++.++.++|||||++++..
T Consensus 154 ~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 154 DVA---QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CCC---CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCC---CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 544 2333 556889999999999999954
No 161
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=1e-14 Score=129.25 Aligned_cols=109 Identities=15% Similarity=0.147 Sum_probs=92.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.+..+++.+...+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+ ++.+..+|+.+.
T Consensus 58 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~ 128 (231)
T 1vbf_A 58 LGIFMLDELDLHK-----GQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLG 128 (231)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGC
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccc
Confidence 4556666665544 889999999999999999998 5899999999999999999986554 799999999874
Q ss_pred CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
...+++||+|++..+++|+. .++.++|||||++++...
T Consensus 129 ~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 129 YEEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEEC
T ss_pred cccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEc
Confidence 33467899999999999985 468999999999999864
No 162
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.60 E-value=2.7e-16 Score=140.51 Aligned_cols=137 Identities=26% Similarity=0.307 Sum_probs=110.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++.+++.++++|+.+.+ ++++||+|++...+++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 789999999999999999987 68999999999999999999999887668999999998876 5689999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHh--hccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC--DAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
..+....+.+++++|+|||.+++... .... .....+...+.+++..++...|...+..
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~~~--------------------~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFRLS--------------------KKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHHHH--------------------HHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEE
T ss_pred cchhhhHHHHHHhhcCCcceeHHHHH--------------------HhhCCceEEECCCCCCHHHHHHHhccCCCEEEEe
Confidence 88777788889999999999655321 1111 1122334457788888888888766554
Q ss_pred E
Q 016981 317 E 317 (379)
Q Consensus 317 ~ 317 (379)
.
T Consensus 217 ~ 217 (241)
T 3gdh_A 217 N 217 (241)
T ss_dssp E
T ss_pred h
Confidence 4
No 163
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.60 E-value=7.8e-15 Score=128.59 Aligned_cols=125 Identities=15% Similarity=0.075 Sum_probs=102.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CCCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~V~~~~~ 235 (379)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|+++++.+++.+++.+..+|..+ ++. .+.||+|+..++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~ 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGM 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCC
Confidence 37899999999999999999975 458999999999999999999999998789999999854 332 236999987654
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
-.. -...++.+....|+|+|++++.... ..+.++++|.+.||.+++
T Consensus 94 Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~--------------------------------~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 94 GGR--LIARILEEGLGKLANVERLILQPNN--------------------------------REDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp CHH--HHHHHHHHTGGGCTTCCEEEEEESS--------------------------------CHHHHHHHHHHTTEEEEE
T ss_pred ChH--HHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CHHHHHHHHHHCCCEEEE
Confidence 321 1378899999999999999986521 366789999999999887
Q ss_pred EE
Q 016981 316 AE 317 (379)
Q Consensus 316 ~~ 317 (379)
..
T Consensus 140 e~ 141 (225)
T 3kr9_A 140 ES 141 (225)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 164
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.59 E-value=6.6e-15 Score=130.30 Aligned_cols=126 Identities=12% Similarity=0.064 Sum_probs=104.1
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|+++++.+++.+++.+..+|..+...++.+||+|++.++.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 37899999999999999999975 45899999999999999999999999778999999988765443469999875543
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEE
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
.. -...++.+..+.|+++|+|+++... ..+.++++|.+.||.+++.
T Consensus 101 g~--lI~~IL~~~~~~L~~~~~lIlq~~~--------------------------------~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 101 GT--LIRTILEEGAAKLAGVTKLILQPNI--------------------------------AAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp HH--HHHHHHHHTGGGGTTCCEEEEEESS--------------------------------CHHHHHHHHHHHTEEEEEE
T ss_pred hH--HHHHHHHHHHHHhCCCCEEEEEcCC--------------------------------ChHHHHHHHHHCCCEEEEE
Confidence 31 2367899999999999999997621 3667899999999998665
Q ss_pred E
Q 016981 317 E 317 (379)
Q Consensus 317 ~ 317 (379)
.
T Consensus 147 ~ 147 (244)
T 3gnl_A 147 A 147 (244)
T ss_dssp E
T ss_pred E
Confidence 4
No 165
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.59 E-value=4.3e-15 Score=137.40 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=102.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEccCCCCCC--CCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA---RGLADKVSFQVGDALQQPF--PDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~i~~~~~d~~~~~~--~~~~fD~V~~ 232 (379)
+.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++++.. ....++++++.+|+.+.+. ++++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 7899999999999999999865 56999999999999999998742 1223589999999877543 4688999999
Q ss_pred ccccCCCCCH----HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 016981 233 MESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS 308 (379)
Q Consensus 233 ~~~l~~~~~~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (379)
.....+.+.. .+++++++++|||||++++...... +. .....++.+.|++
T Consensus 176 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--------~~------------------~~~~~~~~~~l~~ 229 (304)
T 3bwc_A 176 DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW--------LD------------------LELIEKMSRFIRE 229 (304)
T ss_dssp ECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT--------TC------------------HHHHHHHHHHHHH
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc--------cc------------------hHHHHHHHHHHHh
Confidence 7655443322 6899999999999999998752210 00 0035578889999
Q ss_pred CCCceeEEEecCCC
Q 016981 309 LSLEDIKAEDWSQN 322 (379)
Q Consensus 309 aGF~~v~~~~~~~~ 322 (379)
+||..+.......+
T Consensus 230 ~GF~~v~~~~~~vP 243 (304)
T 3bwc_A 230 TGFASVQYALMHVP 243 (304)
T ss_dssp HTCSEEEEEECCCT
T ss_pred CCCCcEEEEEeecc
Confidence 99998877654444
No 166
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.58 E-value=6.6e-15 Score=133.96 Aligned_cols=150 Identities=11% Similarity=0.076 Sum_probs=102.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~ 219 (379)
.+...++.+++.. ++.+|||+|||||.++..+++....+|+|+|+|+.|++.+.++. +++... ..|+..
T Consensus 72 Kl~~~l~~~~~~~----~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 72 KLEKALAVFNLSV----EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRY 141 (291)
T ss_dssp HHHHHHHHTTCCC----TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGG
T ss_pred HHHHHHHhcCCCc----cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCcee
Confidence 5566677666543 47899999999999999999874459999999999999854421 233322 334443
Q ss_pred CC---CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccc-------hHHHHHHHHHhh
Q 016981 220 QP---FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQ-------PWEQELLKKICD 289 (379)
Q Consensus 220 ~~---~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 289 (379)
++ ++..+||+|++..+++++ ..+|.+++++|||||++++.. .++......... +..+
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lv--kPqfe~~~~~~~~~G~vrd~~~~-------- 208 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALV--KPQFEAGREQIGKNGIVRESSIH-------- 208 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CGGGTSCGGGCC-CCCCCCHHHH--------
T ss_pred cchhhCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEE--CcccccChhhcCCCCccCCHHHH--------
Confidence 32 344569999998887765 789999999999999999873 111100000000 0000
Q ss_pred ccCCCCCCCHHHHHHHHHhCCCceeEEEec
Q 016981 290 AYYLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
....+++.++++++||.+..+...
T Consensus 209 ------~~~~~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 209 ------EKVLETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp ------HHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred ------HHHHHHHHHHHHHCCCEEEEEEEC
Confidence 125778999999999998877643
No 167
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.58 E-value=1.1e-14 Score=137.24 Aligned_cols=102 Identities=25% Similarity=0.322 Sum_probs=90.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.+++.++.+|+.+++++ ++||+|++..+++|
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~ 128 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 128 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTT
T ss_pred cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhc
Confidence 789999999999999999987445999999996 8899999999988878999999999988765 68999999988888
Q ss_pred CC--CHHHHHHHHHHhcCCCCEEEEE
Q 016981 239 MP--DKSKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 239 ~~--~~~~~l~~~~r~LkpgG~l~i~ 262 (379)
+. +....+.++.++|||||.+++.
T Consensus 129 ~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 129 LFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 74 4468888999999999999864
No 168
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=2.4e-14 Score=126.23 Aligned_cols=104 Identities=20% Similarity=0.299 Sum_probs=88.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-CC---CCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP---DGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~---~~~fD~V~ 231 (379)
+.+|||+|||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.+++.+..+|+.+. + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 7899999999999999999986 5799999999999999999999988877899999998653 1 11 26799999
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+... ..+...+++++.++|||||++++.+..
T Consensus 139 ~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8655 234578999999999999998887644
No 169
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.58 E-value=3.3e-15 Score=135.52 Aligned_cols=104 Identities=17% Similarity=0.240 Sum_probs=85.0
Q ss_pred CCEEEEeCCcccH----HHHHHHHHcC-----CEEEEEeCCHHHHHHHHHHHHH-----------------------cC-
Q 016981 159 PKNVVDVGCGIGG----SSRYLAKKFG-----AKCQGITLSPVQAQRANALAAA-----------------------RG- 205 (379)
Q Consensus 159 ~~~vLDiGcGtG~----~~~~l~~~~~-----~~v~gvD~s~~~~~~a~~~~~~-----------------------~~- 205 (379)
+.+|||+|||||. +++.+++..+ .+|+|+|+|+.|++.|++.... .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 6799999999998 6666776533 4899999999999999986310 00
Q ss_pred ------CCCCeEEEEccCCCCCCC-CCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEE
Q 016981 206 ------LADKVSFQVGDALQQPFP-DGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 206 ------~~~~i~~~~~d~~~~~~~-~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~ 262 (379)
+..++.|.+.|+.+.|++ .++||+|+|.+++.|+++. .+++++++++|||||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013699999999886665 5789999999999999765 79999999999999999883
No 170
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.58 E-value=1.5e-14 Score=128.56 Aligned_cols=104 Identities=22% Similarity=0.316 Sum_probs=91.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCC--CCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP--DGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~fD~V~~~~ 234 (379)
+.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++...++.+++.+..+|+.+. +.. +++||+|++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 7899999999999999999987 6899999999999999999999988877899999998774 332 57899999876
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
... +...+++++.++|||||++++.++.
T Consensus 135 ~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 135 AKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp GGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 643 6789999999999999999997654
No 171
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.58 E-value=3.5e-15 Score=149.61 Aligned_cols=105 Identities=29% Similarity=0.357 Sum_probs=91.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEecccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMESG 236 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~l 236 (379)
+.+|||||||+|.++..|+++ |++|+|||+|+.+++.|+.++...+. .+++|.+++++++ ++.+++||+|+|..++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 789999999999999999997 89999999999999999999987763 3799999999887 4567899999999999
Q ss_pred CCCCCHH--HHHHHHHHhcCCCCEEEEEecc
Q 016981 237 EHMPDKS--KFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 237 ~~~~~~~--~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+|++|+. ..+..+.+.|+++|..++..+.
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 9998874 3355678889999887777653
No 172
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.57 E-value=4.2e-15 Score=132.97 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=91.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCC-----CCcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP-----DGQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~-----~~~fD~V 230 (379)
+.+|||+|||+|..+..+++.. +++|+++|+++.+++.|+++++..++.++++++.+|+.+. +.. +++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 7899999999999999999875 5799999999999999999999999878999999998764 211 4789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCC
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRD 268 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~ 268 (379)
++... ..+...+++++.++|||||++++.+.....
T Consensus 141 ~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 141 FIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 98654 345678999999999999999998765433
No 173
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.57 E-value=8.8e-14 Score=122.85 Aligned_cols=136 Identities=15% Similarity=0.170 Sum_probs=94.8
Q ss_pred CCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---CCCCcccEEE
Q 016981 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (379)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V~ 231 (379)
.++.+|||+|||+|.++..+++.. .++|+|+|+|+.|++...+..+.. .|+.++++|+.... ...++||+|+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEEE
Confidence 359999999999999999999875 469999999999976655554443 48999999987642 1246899999
Q ss_pred eccccCCCCCHHHHH-HHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 016981 232 SMESGEHMPDKSKFV-SELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (379)
Q Consensus 232 ~~~~l~~~~~~~~~l-~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 310 (379)
+.... ++....+ ..+.+.|||||+|+++..... ... . ...--..++..+.|+++|
T Consensus 152 ~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~----------------~d~---t--~~~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 152 VDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARS----------------IDV---T--KDPKEIYKTEVEKLENSN 207 (232)
T ss_dssp ECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC----------------------------CCSSSSTTHHHHHHHHTT
T ss_pred ecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCC----------------ccc---C--CCHHHHHHHHHHHHHHCC
Confidence 87543 5555555 456669999999999842110 000 0 000001234567888999
Q ss_pred CceeEEEec
Q 016981 311 LEDIKAEDW 319 (379)
Q Consensus 311 F~~v~~~~~ 319 (379)
|+.++..+.
T Consensus 208 f~~~~~~~l 216 (232)
T 3id6_C 208 FETIQIINL 216 (232)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEecc
Confidence 999987654
No 174
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.57 E-value=1.9e-14 Score=136.66 Aligned_cols=104 Identities=20% Similarity=0.220 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC--CeEEEEccCCCCCCCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD--KVSFQVGDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~i~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (379)
+.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++..+++.. +++|..+|+.+ ++++++||+|+++..
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 6899999999999999999987 7899999999999999999999887643 58889999887 456789999999988
Q ss_pred cCCCCC-----HHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 GEHMPD-----KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 l~~~~~-----~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+++... ..++++++.++|||||+++++.
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 875322 2478999999999999999976
No 175
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=2.9e-14 Score=125.98 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=87.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEccCCCCCCCCCcccEEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPDGQFDLVW 231 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~fD~V~ 231 (379)
++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+. ..++.+..+|+...+..+++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 488999999999999999998763 6999999999999999999887653 3589999999887655567899999
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+...++++ ++++.++|||||++++...
T Consensus 157 ~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 157 VGAAAPVV------PQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp ECSBBSSC------CHHHHHTEEEEEEEEEEES
T ss_pred ECCchHHH------HHHHHHhcCCCcEEEEEEe
Confidence 99888776 4688999999999999764
No 176
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=1.3e-14 Score=131.21 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=88.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEccCCCC-------CCCCCcc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA---RGLADKVSFQVGDALQQ-------PFPDGQF 227 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~i~~~~~d~~~~-------~~~~~~f 227 (379)
+.+|||+|||+|.++..++++. +.+|+|+|+++.+++.|++++.. .++.+++.++++|+.+. ++++++|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 7899999999999999999987 57999999999999999999887 77766799999999886 2567899
Q ss_pred cEEEeccccCCC------------------CCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 228 DLVWSMESGEHM------------------PDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 228 D~V~~~~~l~~~------------------~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+|+++-.+... .+...+++.+.++|||||++++..
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999997333221 235789999999999999998864
No 177
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.56 E-value=2.1e-14 Score=125.45 Aligned_cols=103 Identities=23% Similarity=0.326 Sum_probs=88.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~~~~ 235 (379)
+.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.|+++++..++.+++++..+|+.+. +..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 7899999999999999999876 5799999999999999999998888766899999998764 44456 999998732
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
..+...+++++.++|||||.+++.+..
T Consensus 136 ---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 136 ---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred ---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 456789999999999999999987643
No 178
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.56 E-value=6.4e-14 Score=125.37 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=94.7
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC
Q 016981 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF 222 (379)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 222 (379)
..++..+.+.+ +.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++....++.+++.+...|+.+...
T Consensus 81 ~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 81 FYIALKLNLNK-----EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC
T ss_pred HHHHHhcCCCC-----CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc
Confidence 34555555544 889999999999999999998 889999999999999999999988876789999999887543
Q ss_pred CCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+++.||+|++ +.+++..+++++.++|||||++++..
T Consensus 155 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 155 PEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred CCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 5678999997 45677899999999999999999987
No 179
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.56 E-value=3.4e-14 Score=131.98 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=101.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEec--
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM-- 233 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~-- 233 (379)
++.+|||+|||+|..+..+++.. +.+|+|+|+|+.+++.++++++..++. ++.+.++|+.+++..+++||+|++.
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEEeCC
Confidence 38899999999999999999876 379999999999999999999998874 7999999998876446789999973
Q ss_pred ----cccCCCCCH----------------HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCC
Q 016981 234 ----ESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYL 293 (379)
Q Consensus 234 ----~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
.++.+.++. ..+|+++.++|||||++++++.....
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~------------------------- 251 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP------------------------- 251 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-------------------------
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-------------------------
Confidence 233333321 48899999999999999998743211
Q ss_pred CCCCCHHHHHHHHHhCCCceeEE
Q 016981 294 PAWCSTADYVKLLQSLSLEDIKA 316 (379)
Q Consensus 294 ~~~~~~~~~~~~l~~aGF~~v~~ 316 (379)
--..+.+...|++.||+.+.+
T Consensus 252 --~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 252 --EENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp --GGTHHHHHHHHHHSSEEEECC
T ss_pred --HHhHHHHHHHHhcCCCEEecC
Confidence 003445667788888876654
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.56 E-value=9.9e-15 Score=131.17 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=91.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHH--c-CCEEEEEeCCHHHHHHHHHHHHHc---CCCCC----
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK--F-GAKCQGITLSPVQAQRANALAAAR---GLADK---- 209 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~--~-~~~v~gvD~s~~~~~~a~~~~~~~---~~~~~---- 209 (379)
.++..+++.+... ++.+|||+|||+|.++..+++. . +.+|+|+|+|+.+++.|++++... ++..+
T Consensus 38 ~l~~~~l~~~~~~-----~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1o9g_A 38 EIFQRALARLPGD-----GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELER 112 (250)
T ss_dssp HHHHHHHHTSSCC-----SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHhcccC-----CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhh
Confidence 4556666654322 3689999999999999999987 4 568999999999999999887654 33212
Q ss_pred ---------------------eE-------------EEEccCCCCCC-----CCCcccEEEeccccCCCCC---------
Q 016981 210 ---------------------VS-------------FQVGDALQQPF-----PDGQFDLVWSMESGEHMPD--------- 241 (379)
Q Consensus 210 ---------------------i~-------------~~~~d~~~~~~-----~~~~fD~V~~~~~l~~~~~--------- 241 (379)
+. |.++|+.+... ..++||+|+++..+.+..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~ 192 (250)
T 1o9g_A 113 REQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQP 192 (250)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHH
T ss_pred hhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccH
Confidence 56 99999877421 3458999999876655433
Q ss_pred HHHHHHHHHHhcCCCCEEEEEec
Q 016981 242 KSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 242 ~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
...+++++.++|||||+++++..
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHHHhcCCCcEEEEeCc
Confidence 35899999999999999999553
No 181
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=2.5e-14 Score=127.28 Aligned_cols=111 Identities=21% Similarity=0.334 Sum_probs=91.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
....+++.+...+ +.+|||+|||+|.++..+++..+.+|+++|+++.+++.|++++...++. ++.+..+|+ ..
T Consensus 79 ~~~~~~~~l~~~~-----~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~-~~ 151 (235)
T 1jg1_A 79 MVAIMLEIANLKP-----GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDG-SK 151 (235)
T ss_dssp HHHHHHHHHTCCT-----TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG-GG
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCc-cc
Confidence 3445555555544 8899999999999999999986579999999999999999999988774 699999997 33
Q ss_pred CCCC-CcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 221 PFPD-GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 221 ~~~~-~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
++++ .+||+|++..+++++. .++.++|||||++++...
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEe
Confidence 4444 3599999999999885 378899999999999774
No 182
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.55 E-value=7.2e-14 Score=123.53 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=81.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---CCCCcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V~~ 232 (379)
++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.++++++.. +++.+..+|+.+.. ...++||+|++
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 48899999999999999999885 379999999999999999887653 58999999998732 12468999997
Q ss_pred ccccCCCCCHH-HHHHHHHHhcCCCCEEEEE
Q 016981 233 MESGEHMPDKS-KFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 233 ~~~l~~~~~~~-~~l~~~~r~LkpgG~l~i~ 262 (379)
... .++.. .++.++.++|||||++++.
T Consensus 150 ~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 150 DVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 644 23443 4599999999999999998
No 183
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.55 E-value=2.3e-15 Score=133.62 Aligned_cols=153 Identities=11% Similarity=0.050 Sum_probs=94.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~ 219 (379)
.+.+.++.++... ++.+|||||||||.++..+++....+|+|+|+|+.|++.|+++.. ++... ..++..
T Consensus 24 kL~~~L~~~~~~~----~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~ 93 (232)
T 3opn_A 24 KLEKALKEFHLEI----NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRN 93 (232)
T ss_dssp HHHHHHHHTTCCC----TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGG
T ss_pred HHHHHHHHcCCCC----CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEE
Confidence 4566666665443 467999999999999999998732599999999999998776432 22211 111111
Q ss_pred C---CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCC-C-
Q 016981 220 Q---PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYL-P- 294 (379)
Q Consensus 220 ~---~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 294 (379)
. .++...||.+.+..++.++ ..++++++++|||||++++.. .+. .... .......... .
T Consensus 94 ~~~~~~~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~p~----~e~~-------~~~~~~~G~~~d~ 157 (232)
T 3opn_A 94 AVLADFEQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--KPQ----FEAG-------REQVGKNGIIRDP 157 (232)
T ss_dssp CCGGGCCSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CHH----HHSC-------HHHHC-CCCCCCH
T ss_pred eCHhHcCcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--Ccc----cccC-------HHHhCcCCeecCc
Confidence 1 1111224555544444444 779999999999999999863 110 0000 0000000000 0
Q ss_pred --CCCCHHHHHHHHHhCCCceeEEEec
Q 016981 295 --AWCSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 295 --~~~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
...+.+++.++++++||+++.+...
T Consensus 158 ~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 158 KVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred chhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 0126788999999999998887643
No 184
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=6.9e-15 Score=123.81 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=86.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-CC--CCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP--DGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~--~~~fD~V~~~~ 234 (379)
+.+|||+|||+|.++..+++. +..|+|+|+|+.+++.|++++...++ ++.+..+|+.+. + .+ .++||+|++..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 789999999999999999987 56799999999999999999988776 799999998763 2 11 24799999987
Q ss_pred ccCCCCCHHHHHHHHH--HhcCCCCEEEEEeccC
Q 016981 235 SGEHMPDKSKFVSELA--RVTAPAGTIIIVTWCH 266 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~--r~LkpgG~l~i~~~~~ 266 (379)
.++ .+...+++.+. ++|||||.+++.....
T Consensus 119 ~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 765 55567777777 9999999999987543
No 185
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.54 E-value=2.1e-14 Score=126.72 Aligned_cols=105 Identities=17% Similarity=0.232 Sum_probs=89.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-CCC----CcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FPD----GQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~----~~fD~V 230 (379)
+.+|||+|||+|..+..+++.+ +.+|+++|+++.+++.|+++++..++.+++.+.++|+.+. + +.. ++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 7899999999999999999875 5799999999999999999999998877899999998653 2 111 789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccC
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 266 (379)
++... ..+...+++++.++|||||++++.+...
T Consensus 145 ~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 145 YIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 96543 3456889999999999999999987543
No 186
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.54 E-value=5e-14 Score=126.29 Aligned_cols=105 Identities=23% Similarity=0.429 Sum_probs=85.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCeEEEEccCCC-CC--CCCC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--------GLADKVSFQVGDALQ-QP--FPDG 225 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--------~~~~~i~~~~~d~~~-~~--~~~~ 225 (379)
++.+|||||||+|.++..+++.. +..|+|+|+|+.+++.|++++... ++ .++.++.+|+.+ ++ ++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhcccc
Confidence 37899999999999999999987 569999999999999999988765 65 589999999987 55 6678
Q ss_pred cccEEEeccccCCCCCH--------HHHHHHHHHhcCCCCEEEEEe
Q 016981 226 QFDLVWSMESGEHMPDK--------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~~~--------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
++|.|+....-.+.... ..+++++.++|||||.|++..
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 99999854321111100 489999999999999999964
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.54 E-value=1.5e-13 Score=129.83 Aligned_cols=117 Identities=20% Similarity=0.164 Sum_probs=96.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
+...++..++..+ +.+|||+|||+|.++..++... ..+++|+|+|+.+++.|+++++..++. ++.+.++|+.
T Consensus 191 la~~l~~~~~~~~-----~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~ 264 (354)
T 3tma_A 191 LAQALLRLADARP-----GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADAR 264 (354)
T ss_dssp HHHHHHHHTTCCT-----TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGG
T ss_pred HHHHHHHHhCCCC-----CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChh
Confidence 3444555555544 7899999999999999999875 379999999999999999999999986 8999999999
Q ss_pred CCCCCCCcccEEEeccccCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 219 QQPFPDGQFDLVWSMESGEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~--------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+++.+.+.||+|+++-....... ...+++++.++|||||.+++..
T Consensus 265 ~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 265 HLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred hCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 98776778999999755433211 2678999999999999999976
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.54 E-value=4.2e-14 Score=126.84 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=89.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-C-----CCCcccE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F-----PDGQFDL 229 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~fD~ 229 (379)
+.+|||||||+|..+..+++.+ +.+|+++|+|+.+++.|+++++..++.++++++.+|+.+. + + ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 7899999999999999999986 5799999999999999999999988877899999998663 3 2 1578999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|++... ..+...+++++.++|||||.+++.+.
T Consensus 160 V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 160 IFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 998644 34668999999999999999998764
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.54 E-value=5.2e-14 Score=124.42 Aligned_cols=101 Identities=19% Similarity=0.135 Sum_probs=87.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEccCCCCC----CC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQP----FP 223 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~------~~v~gvD~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~----~~ 223 (379)
++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|++++...++ ..++.+..+|+.+.. ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 378999999999999999998754 4999999999999999999988763 358999999998754 45
Q ss_pred CCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.++||+|++...++++ ++++.++|||||++++...
T Consensus 160 ~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 6789999999998876 4788999999999999764
No 190
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.53 E-value=2.6e-14 Score=139.92 Aligned_cols=115 Identities=23% Similarity=0.287 Sum_probs=94.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
..+.+++.+... ++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.+++.++.+|+.++
T Consensus 146 ~~~~il~~l~~~-----~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~ 219 (480)
T 3b3j_A 146 YQRAILQNHTDF-----KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV 219 (480)
T ss_dssp HHHHHHHTGGGT-----TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHHhhhhc-----CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC
Confidence 344455554333 3789999999999999999886456999999998 9999999999999878999999999987
Q ss_pred CCCCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEE
Q 016981 221 PFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~ 262 (379)
+++ ++||+|++..+++|+.+. ...+.++.++|||||.+++.
T Consensus 220 ~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 220 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred ccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 664 689999998877777543 66788899999999999853
No 191
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.53 E-value=7.2e-14 Score=131.88 Aligned_cols=101 Identities=24% Similarity=0.229 Sum_probs=87.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc---c
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME---S 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~---~ 235 (379)
+++|||||||+|.++..+++....+|+|+|.|+ +++.|++.++.+++.+++.++.+|++++.++ ++||+|++-. .
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 889999999999999988886446899999996 8899999999999988999999999998775 7899999843 3
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEE
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
+.+-.....++....++|||||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 44445678899999999999999864
No 192
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.53 E-value=8.9e-14 Score=126.15 Aligned_cols=95 Identities=28% Similarity=0.398 Sum_probs=83.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|+++. .++.+..+|+.++++++++||+|++..+..
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~ 159 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYAPC 159 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCChh
Confidence 7899999999999999999986 679999999999999998864 478999999999888889999999876532
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccC
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 266 (379)
.++++.++|||||++++.+...
T Consensus 160 -------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 160 -------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -------CHHHHHHHEEEEEEEEEEEECT
T ss_pred -------hHHHHHHhcCCCcEEEEEEcCH
Confidence 4899999999999999988543
No 193
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.52 E-value=4.8e-14 Score=124.73 Aligned_cols=100 Identities=18% Similarity=0.293 Sum_probs=85.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEccCCCCCCCC-C
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG-------AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPD-G 225 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~-------~~v~gvD~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~-~ 225 (379)
++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+. ..++.+..+|... ++++ +
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 162 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNA 162 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGC
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCC
Confidence 378999999999999999998654 5999999999999999999876541 2579999999877 4444 7
Q ss_pred cccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+||+|++...++++. +++.++|||||++++...
T Consensus 163 ~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 899999999998874 788999999999999764
No 194
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.52 E-value=4.3e-14 Score=119.25 Aligned_cols=96 Identities=22% Similarity=0.278 Sum_probs=83.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+|||+|||+|.++..+++.+ +.+++|+|+++ +++. .++.+..+|+.+.+ +++++|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 37899999999999999999985 47999999999 6532 47999999998876 667899
Q ss_pred cEEEeccccCCCCCH-----------HHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDK-----------SKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~-----------~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|++...+++..+. ..+++++.++|||||.+++..+.
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 999999998888776 68999999999999999998753
No 195
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.51 E-value=3.8e-14 Score=133.41 Aligned_cols=102 Identities=22% Similarity=0.278 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ ++.+..+|+.+.+ +++||+|+++..++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc--cCCeeEEEECCCcc
Confidence 6799999999999999999986 46999999999999999999988775 4677888887643 67899999999887
Q ss_pred CC-----CCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 238 HM-----PDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 238 ~~-----~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+. .+...+++++.++|||||.+++...
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 52 3457899999999999999999864
No 196
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.50 E-value=4.8e-14 Score=131.75 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=86.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEccCCCCCC----CCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPF----PDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++. +++|+++|+|+.+++.|+++++.+++.+ ++.++++|+.+... ..++||+|++.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 789999999999999999986 6699999999999999999999888754 59999999877521 14689999984
Q ss_pred cc----------cCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 234 ES----------GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 234 ~~----------l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
-. +.+..+...+++++.++|||||.+++...+
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 32 112234578999999999999998876643
No 197
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.50 E-value=2.8e-13 Score=128.77 Aligned_cols=125 Identities=25% Similarity=0.175 Sum_probs=100.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..++... ..+|+|+|+|+.|++.|++++...|+.+++.+.++|+.++++++++||+|+++-.+.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCC
Confidence 7899999999999999999874 238999999999999999999999887789999999999988778999999975543
Q ss_pred CC----CCH----HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 016981 238 HM----PDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (379)
Q Consensus 238 ~~----~~~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 309 (379)
.- ... ..+++++.++| ||.+++... +.+.+.+.+++.
T Consensus 298 ~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------------------~~~~~~~~~~~~ 342 (373)
T 3tm4_A 298 LKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------------------EKKAIEEAIAEN 342 (373)
T ss_dssp ------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------------CHHHHHHHHHHT
T ss_pred cccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------------CHHHHHHHHHHc
Confidence 22 111 56788889988 555555441 456677889999
Q ss_pred CCceeEEEe
Q 016981 310 SLEDIKAED 318 (379)
Q Consensus 310 GF~~v~~~~ 318 (379)
||+......
T Consensus 343 G~~~~~~~~ 351 (373)
T 3tm4_A 343 GFEIIHHRV 351 (373)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999876543
No 198
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=5.4e-13 Score=126.91 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=86.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CCC-CCCcccEEEecc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPF-PDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~fD~V~~~~ 234 (379)
++.+|||+| |+|.++..++... +.+|+|+|+|+.+++.|+++++..|+. +++++.+|+.+ ++. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEECC
Confidence 378999999 9999999998875 369999999999999999999988875 89999999988 653 356899999986
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 235 SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.++.. ....+++++.++|||||++++..
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEE
Confidence 55433 24789999999999999664444
No 199
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=6.9e-14 Score=124.52 Aligned_cols=97 Identities=15% Similarity=0.225 Sum_probs=80.9
Q ss_pred CCEEEEeCCcccHHHHHHHHH----c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC---CCCC-CcccE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKK----F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPD-GQFDL 229 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~----~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~-~~fD~ 229 (379)
+.+|||||||+|..+..+++. . +++|+|+|+|+.+++.|+. ..++++++++|+.+. +... .+||+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCCE
Confidence 679999999999999999987 3 6799999999999988872 236899999999874 4333 47999
Q ss_pred EEeccccCCCCCHHHHHHHHHH-hcCCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELAR-VTAPAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r-~LkpgG~l~i~~~ 264 (379)
|++... | .+...++.++.+ +|||||++++.+.
T Consensus 156 I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 156 IFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 997654 4 377889999997 9999999999764
No 200
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.49 E-value=1.4e-13 Score=122.75 Aligned_cols=104 Identities=20% Similarity=0.286 Sum_probs=88.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C--------------
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------------- 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-------------- 221 (379)
+.+|||+|||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.+++.+..+|+.+. +
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 7899999999999999999986 5799999999999999999999888766799999997652 2
Q ss_pred CCC--CcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 222 FPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 222 ~~~--~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+++ ++||+|++.... .+...+++++.++|||||++++.+..
T Consensus 141 f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp TCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 789999987543 34578999999999999999997643
No 201
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1.2e-13 Score=125.67 Aligned_cols=102 Identities=20% Similarity=0.068 Sum_probs=89.6
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|||+|||+|.++..+++.. +.+|+|+|+++.+++.|+++++.+++ .++.++.+|+.+.+. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL-NNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC-SSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 38899999999999999999985 56999999999999999999999887 478999999988743 5789999987553
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+...++.++.+.|||||+++++.+.
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 5678899999999999999998754
No 202
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.48 E-value=1.6e-13 Score=121.95 Aligned_cols=104 Identities=19% Similarity=0.258 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC----CCCC--CcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ----PFPD--GQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~--~~fD~V 230 (379)
+.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++...++.+++.+..+|+.+. +..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 7899999999999999999876 4699999999999999999999888877899999997542 2223 789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++... ..+...+++++.++|||||++++.+..
T Consensus 153 ~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 153 FIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 97654 245688999999999999999997754
No 203
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.48 E-value=2.2e-13 Score=124.68 Aligned_cols=101 Identities=24% Similarity=0.331 Sum_probs=84.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcc---cEEEec--
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQF---DLVWSM-- 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f---D~V~~~-- 233 (379)
+.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.|++++...++.+++.|+++|+.+. ++ ++| |+|+++
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPP 201 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCC
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCC
Confidence 67999999999999999998745799999999999999999999988866799999999773 22 578 999997
Q ss_pred ----------cccCCCC--------CHHHHHHHHH-HhcCCCCEEEEE
Q 016981 234 ----------ESGEHMP--------DKSKFVSELA-RVTAPAGTIIIV 262 (379)
Q Consensus 234 ----------~~l~~~~--------~~~~~l~~~~-r~LkpgG~l~i~ 262 (379)
.+. |-+ +...+++++. +.|+|||++++.
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 222 222 1237899999 999999999974
No 204
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.47 E-value=1.9e-13 Score=121.77 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=88.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-C-----CCCcccE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F-----PDGQFDL 229 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~fD~ 229 (379)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|+++++..++.+++++..+|+.+. + + ++++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 7899999999999999999976 5799999999999999999999988877899999998663 2 2 2578999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|++... ..+...+++++.++|||||.+++.+.
T Consensus 151 I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 151 GFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 997643 23558899999999999999988764
No 205
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.47 E-value=4.4e-13 Score=121.43 Aligned_cols=128 Identities=16% Similarity=0.079 Sum_probs=103.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++...++|+++|+++.+++.++++++.+++.+++.++.+|+.+++. .+.||.|++...
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p-- 201 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC--
Confidence 38999999999999999999875579999999999999999999999998889999999988753 578999987632
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcee
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 314 (379)
+....++..+.++|||||++.+.++....... -...+.+++..++.|++..
T Consensus 202 --~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~------------------------~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTTCEEE
T ss_pred --CcHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------------hhHHHHHHHHHHHcCCcEE
Confidence 34467888899999999999887654321100 0135667788889999753
No 206
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.46 E-value=2.4e-13 Score=120.22 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-CCC----CcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FPD----GQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~----~~fD~V 230 (379)
+.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|+++++..++.+++++..+|+.+. + +.+ ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 7899999999999999999875 5799999999999999999999988877899999998653 1 211 689999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++... ..+...+++++.++|||||.+++.+..
T Consensus 150 ~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 150 VVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 98654 345578999999999999999997643
No 207
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.46 E-value=4.3e-14 Score=132.77 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=81.0
Q ss_pred CCEEEEeCCc------ccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC------C
Q 016981 159 PKNVVDVGCG------IGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP------D 224 (379)
Q Consensus 159 ~~~vLDiGcG------tG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~ 224 (379)
+.+||||||| +|..+..+++.+ +++|+|+|+|+.|.. ..++++|+++|+.++++. +
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhccc
Confidence 7899999999 777777777654 689999999999731 136899999999998776 6
Q ss_pred CcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 225 GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++||+|++.. .++..+...+|++++++|||||++++.++.
T Consensus 287 ~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 8999999864 466677889999999999999999999865
No 208
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.46 E-value=6.6e-14 Score=128.20 Aligned_cols=112 Identities=23% Similarity=0.288 Sum_probs=85.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.++..+ +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+..++++++.+|+.+.
T Consensus 16 i~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 16 IINSIIDKAALRP-----TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHTCCCT-----TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 5667777776654 889999999999999999998 6799999999999999999987665546899999999887
Q ss_pred CCCCCcccEEEeccc-----------cCCCCCHHHHH----HHH--HHhcCCCCEEE
Q 016981 221 PFPDGQFDLVWSMES-----------GEHMPDKSKFV----SEL--ARVTAPAGTII 260 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~-----------l~~~~~~~~~l----~~~--~r~LkpgG~l~ 260 (379)
+++ +||+|+++.. ++|.++...++ +++ +++|+|||.++
T Consensus 90 ~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 764 7999998643 33333221111 233 46899999763
No 209
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=3.1e-13 Score=116.91 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=77.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-------------
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------------- 221 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------------- 221 (379)
++.+|||+|||+|.++..++++++ .+|+|+|+|+.+ .. +++.+.++|+.+.+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccccc
Confidence 378999999999999999999863 689999999831 12 47999999998876
Q ss_pred ------------CCCCcccEEEeccccCCCC----CH-------HHHHHHHHHhcCCCCEEEEEec
Q 016981 222 ------------FPDGQFDLVWSMESGEHMP----DK-------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 222 ------------~~~~~fD~V~~~~~l~~~~----~~-------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+++++||+|++...+++.. +. ..+++++.++|||||++++..+
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5667999999988777642 22 1378999999999999998664
No 210
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.45 E-value=1.2e-12 Score=127.52 Aligned_cols=107 Identities=21% Similarity=0.311 Sum_probs=91.0
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--CCCCcccEEEe-
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWS- 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~- 232 (379)
++.+|||+|||+|..+..+++.. + .+|+++|+|+.+++.++++++..|+ .++.+..+|+.+.+ +++++||+|++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 38899999999999999999976 3 7999999999999999999999887 47999999998875 55578999996
Q ss_pred -----ccccCCCCCH----------------HHHHHHHHHhcCCCCEEEEEecc
Q 016981 233 -----MESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 233 -----~~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
..++.+.++. ..+++++.++|||||++++++..
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3455555553 57899999999999999998753
No 211
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.45 E-value=2.2e-12 Score=112.15 Aligned_cols=127 Identities=12% Similarity=-0.025 Sum_probs=97.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.+++++...++ ++.+..+|+.+++ ++||+|+++-.++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 3789999999999999999987434899999999999999999887765 7999999998864 4899999988777
Q ss_pred CCC--CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeE
Q 016981 238 HMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (379)
Q Consensus 238 ~~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 315 (379)
+.. ....+++++.++| ||. ++...... . +.+.+.+.+++.||+...
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~-~~~~~~~~--------------~---------------~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVV-YSIHLAKP--------------E---------------VRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEE-EEEEECCH--------------H---------------HHHHHHHHHHHTTEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcE-EEEEeCCc--------------C---------------CHHHHHHHHHHCCCeEEE
Confidence 664 3367899999998 554 43321100 0 234566788899998766
Q ss_pred EEecCC
Q 016981 316 AEDWSQ 321 (379)
Q Consensus 316 ~~~~~~ 321 (379)
+.....
T Consensus 172 ~~~~~~ 177 (207)
T 1wy7_A 172 RLTTKI 177 (207)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 654433
No 212
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.45 E-value=2.4e-13 Score=123.77 Aligned_cols=106 Identities=11% Similarity=0.114 Sum_probs=88.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC----CCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~V~~ 232 (379)
+.+|||+|||+|..+..+++.. + .+|+|+|+|+.+++.++++++..++. ++.+..+|+.+++. ..++||+|++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCEEEE
Confidence 8899999999999999999876 4 79999999999999999999998874 89999999887643 2578999998
Q ss_pred cc------ccC------------CCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 233 ME------SGE------------HMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 233 ~~------~l~------------~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.- ++. .......+++++.++|||||++++++..
T Consensus 163 d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 62 221 1134578999999999999999998743
No 213
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.42 E-value=3.4e-13 Score=123.71 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=82.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCeEEEEccCCCC-CCCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG----LADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~i~~~~~d~~~~-~~~~~~fD~V~~ 232 (379)
+.+|||||||+|.+++.+++.. ..+|+++|+|+.+++.|++++...+ -.++++++.+|+.+. ...+++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 7899999999999999999875 5689999999999999999877542 135899999998764 344678999998
Q ss_pred ccccCCCCCH----HHHHHHHHHhcCCCCEEEEEe
Q 016981 233 MESGEHMPDK----SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~~~~~----~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.......+.. ..+++++.++|||||++++..
T Consensus 164 D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 5443222221 679999999999999999875
No 214
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=4.6e-12 Score=109.53 Aligned_cols=86 Identities=16% Similarity=0.174 Sum_probs=71.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++. ++.++++|+.+++ ++||+|+++..+++
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECCCC--
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECCCchh
Confidence 78999999999999999998733479999999999999998763 6899999998864 68999999999988
Q ss_pred CCC--HHHHHHHHHHhc
Q 016981 239 MPD--KSKFVSELARVT 253 (379)
Q Consensus 239 ~~~--~~~~l~~~~r~L 253 (379)
..+ ...+++++.+++
T Consensus 123 ~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS 139 (200)
T ss_dssp -----CHHHHHHHHHHE
T ss_pred ccCchhHHHHHHHHHhc
Confidence 864 257899999998
No 215
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=8.5e-13 Score=121.39 Aligned_cols=105 Identities=19% Similarity=0.245 Sum_probs=84.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~ 235 (379)
+.+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++++.... .++++++++|+.+. .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 3599999999999999999976 6799999999999999999875332 35899999998764 345688999998643
Q ss_pred cCCC-CC---HHHHHHHHHHhcCCCCEEEEEec
Q 016981 236 GEHM-PD---KSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 236 l~~~-~~---~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.... +. ..+++++++++|||||++++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3221 11 27899999999999999988764
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.39 E-value=1.5e-12 Score=121.53 Aligned_cols=105 Identities=21% Similarity=0.340 Sum_probs=84.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEccCCCC--CCCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ--PFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~--~~~~~~fD~V~~ 232 (379)
+.+|||||||+|.+++.+++.. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+. ..++++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 6899999999999999999875 579999999999999999987652 33 35899999998764 234678999998
Q ss_pred ccccCC--CCC--HHHHHHHHHHhcCCCCEEEEEe
Q 016981 233 MESGEH--MPD--KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~--~~~--~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
...... ..+ ...+++++.++|||||++++..
T Consensus 201 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 201 DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 643211 111 3789999999999999999863
No 217
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.37 E-value=1.6e-12 Score=111.73 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=80.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.+.++.+...+-. ++.+|||+|||+|.++..++++ +.+|+|+|+++.. . .+++.++++|+.+.
T Consensus 12 KL~ei~~~~~~~~----~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~-~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 12 KLEFLLDRYRVVR----KGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------E-IAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHHHCCSC----TTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------C-CTTCEEEECCTTSS
T ss_pred HHHHHHHHcCCCC----CCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------c-CCCeEEEEccccCH
Confidence 4455555544322 4899999999999999999998 7899999999742 1 25899999999876
Q ss_pred CCC-------C----CcccEEEeccccCCCCC-----------HHHHHHHHHHhcCCCCEEEEEec
Q 016981 221 PFP-------D----GQFDLVWSMESGEHMPD-----------KSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 221 ~~~-------~----~~fD~V~~~~~l~~~~~-----------~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+.. . ++||+|++......... ...+++.+.++|||||.|++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 421 1 48999998754332211 14678889999999999998775
No 218
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.37 E-value=6.2e-13 Score=122.68 Aligned_cols=105 Identities=19% Similarity=0.270 Sum_probs=82.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEccCCC-CCCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQ-QPFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~-~~~~~~~fD~V~~~ 233 (379)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+ ++..+++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 6899999999999999999875 47999999999999999998765 233 3689999999866 33346789999985
Q ss_pred cccCCCC----CHHHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHMP----DKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~~----~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
......+ ....+++++.++|||||++++..
T Consensus 176 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 176 SSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 4432211 12578999999999999999876
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.37 E-value=9.1e-13 Score=122.26 Aligned_cols=105 Identities=19% Similarity=0.219 Sum_probs=85.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cC-C-CCCeEEEEccCCCC-CCCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RG-L-ADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~-~-~~~i~~~~~d~~~~-~~~~~~fD~V~~ 232 (379)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. .+ + .++++++.+|+.+. +..+++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 6899999999999999999875 57999999999999999998764 22 2 36899999998763 334678999998
Q ss_pred ccccCC-CCC------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 233 MESGEH-MPD------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~-~~~------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
....+. ... ..+++++++++|||||.+++..
T Consensus 158 d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 158 DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 755433 011 3789999999999999999865
No 220
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.36 E-value=3.7e-12 Score=109.59 Aligned_cols=96 Identities=22% Similarity=0.332 Sum_probs=75.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EccCCCCC-----
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG----------AKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQQP----- 221 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~----- 221 (379)
++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+ .. .++.+. .+|+...+
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHHH
Confidence 388999999999999999999864 789999999832 12 468888 88876643
Q ss_pred ---CCCCcccEEEeccccCCCC----CH-------HHHHHHHHHhcCCCCEEEEEecc
Q 016981 222 ---FPDGQFDLVWSMESGEHMP----DK-------SKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 222 ---~~~~~fD~V~~~~~l~~~~----~~-------~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+++++||+|++...++... +. ..+++++.++|||||++++..+.
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 3456899999976554432 22 47899999999999999998753
No 221
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.36 E-value=2.1e-12 Score=125.04 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=87.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-CCCCcccEEEe--
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWS-- 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~V~~-- 232 (379)
++.+|||+|||+|..+..+++.. .+.|+++|+|+.+++.+++++++.|+. +.+..+|+.+++ +.+++||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEEECC
Confidence 38999999999999999999876 369999999999999999999999884 899999987764 34678999995
Q ss_pred ----ccccCCCCCH----------------HHHHHHHHHhcCCCCEEEEEec
Q 016981 233 ----MESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ----~~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
..++.+-++. .++|+++.++|||||+|++++.
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2233333332 6789999999999999998874
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.36 E-value=2.2e-13 Score=123.77 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=76.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEE--EccCCCCCCCCCcccEEEecc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAA-ARGLADKVSFQ--VGDALQQPFPDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~i~~~--~~d~~~~~~~~~~fD~V~~~~ 234 (379)
++.+|||+|||+|.++..++++ .+|+|+|+|+ |+..++++.. ......++.++ ++|+.+++ +++||+|++..
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 4889999999999999999987 5999999998 6433322100 00011168899 89998876 68899999987
Q ss_pred ccCCCCCH----H---HHHHHHHHhcCCCC--EEEEEecc
Q 016981 235 SGEHMPDK----S---KFVSELARVTAPAG--TIIIVTWC 265 (379)
Q Consensus 235 ~l~~~~~~----~---~~l~~~~r~LkpgG--~l~i~~~~ 265 (379)
+ ++..++ . .+|+++.++||||| .+++..+.
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 7 554443 1 37899999999999 99886654
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.36 E-value=5.3e-13 Score=123.58 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=81.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEccCCCC-CCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~fD~V~~~ 233 (379)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +..+++||+|++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 6899999999999999999875 579999999999999999987543 22 36899999998763 3346789999985
Q ss_pred cccCCCC-CH----HHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHMP-DK----SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~~-~~----~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.. .++. .. ..+++++.++|||||++++..
T Consensus 189 ~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 189 SS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred CC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 43 3321 11 688999999999999999865
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.36 E-value=1.1e-12 Score=120.60 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=82.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEccCCCC-CCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 6899999999999999999875 57999999999999999998754 222 35899999998663 3345789999975
Q ss_pred cccCCCC-----CHHHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHMP-----DKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~~-----~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
..-..+. ....++++++++|||||++++..
T Consensus 171 ~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 171 STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp C----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 3221021 22789999999999999999864
No 225
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.35 E-value=2.4e-12 Score=117.21 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=84.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEccCCCC-CCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.+++.+++.. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +..+++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 7899999999999999999875 479999999999999999987542 23 36899999998763 3345789999986
Q ss_pred cccCCCCC----HHHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHMPD----KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~~~----~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
......+. ..++++++.++|||||.+++..
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 156 STEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 44322211 2689999999999999998864
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.35 E-value=8.1e-13 Score=126.07 Aligned_cols=106 Identities=15% Similarity=0.044 Sum_probs=85.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEccCCCC-C-C--CCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQ-P-F--PDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~-~-~--~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.+ ++.|+++|+.+. + . ...+||+|++.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 78999999999999999998633489999999999999999999998865 899999998763 2 1 24589999985
Q ss_pred ccc-----CCCCC----HHHHHHHHHHhcCCCCEEEEEec
Q 016981 234 ESG-----EHMPD----KSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 234 ~~l-----~~~~~----~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
-.. .+..+ ..+++..+.++|+|||.+++...
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 332 23333 34577888999999999998763
No 227
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.34 E-value=2.7e-13 Score=122.51 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=75.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEE--EccCCCCCCCCCcccEEEecc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAA-ARGLADKVSFQ--VGDALQQPFPDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~i~~~--~~d~~~~~~~~~~fD~V~~~~ 234 (379)
++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++... ......++.++ ++|+.+++ +++||+|++..
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~ 148 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDV 148 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeC
Confidence 4889999999999999999987 6999999998 5332221100 00001168888 89998875 67899999987
Q ss_pred ccCCCCCH----H---HHHHHHHHhcCCCC--EEEEEecc
Q 016981 235 SGEHMPDK----S---KFVSELARVTAPAG--TIIIVTWC 265 (379)
Q Consensus 235 ~l~~~~~~----~---~~l~~~~r~LkpgG--~l~i~~~~ 265 (379)
+ ++..++ . .+|.++.++||||| .+++..+.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 7 554443 1 37899999999999 99887654
No 228
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.34 E-value=1.6e-12 Score=124.57 Aligned_cols=106 Identities=12% Similarity=0.068 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEccCCCCC--C--CCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQP--F--PDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~--~--~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++ .+++.++.+|+.+.. + ..++||+|++.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 789999999999999999987445999999999999999999999887 558999999987752 1 14689999986
Q ss_pred cc---------cCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 234 ES---------GEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 234 ~~---------l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
-. .....+...++.++.+.|+|||.++++..
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 32 22334567899999999999999998773
No 229
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.34 E-value=2.9e-12 Score=123.97 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=86.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-CCCCcccEEEecc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~V~~~~ 234 (379)
++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++++.|+. ++.+..+|+..++ ..+++||+|++.-
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccccCCEEEECC
Confidence 38999999999999999999876 369999999999999999999999984 7999999987764 2357899999732
Q ss_pred ------ccCCCCCH----------------HHHHHHHHHhcCCCCEEEEEec
Q 016981 235 ------SGEHMPDK----------------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 235 ------~l~~~~~~----------------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
++.+-++. .++|.++.++|||||+|++++.
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 22221111 2789999999999999998874
No 230
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.34 E-value=9.2e-13 Score=122.50 Aligned_cols=104 Identities=20% Similarity=0.237 Sum_probs=83.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEccCCCC-CCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++.. +.+|+++|+|+.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 6899999999999999999865 57999999999999999998764 122 35899999998663 3335789999986
Q ss_pred cccCCC---CCH--HHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHM---PDK--SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~---~~~--~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.. .++ ... .++++++.++|||||++++..
T Consensus 197 ~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 197 SS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred Cc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 43 222 111 689999999999999999865
No 231
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.34 E-value=3.4e-11 Score=116.61 Aligned_cols=117 Identities=21% Similarity=0.359 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc
Q 016981 136 AAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG 215 (379)
Q Consensus 136 ~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~ 215 (379)
.....+++.+++.+.... +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++. ++.|..+
T Consensus 269 ~~~e~l~~~~~~~l~~~~-----~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~ 341 (433)
T 1uwv_A 269 GVNQKMVARALEWLDVQP-----EDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHE 341 (433)
T ss_dssp HHHHHHHHHHHHHHTCCT-----TCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEEC
T ss_pred HHHHHHHHHHHHhhcCCC-----CCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEEC
Confidence 344566777777776544 789999999999999999987 789999999999999999999988874 8999999
Q ss_pred cCCC----CCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 216 DALQ----QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 216 d~~~----~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+.+ +++++++||+|++.-.-... ..+++.+.+ ++|++.++++.
T Consensus 342 d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 342 NLEEDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CTTSCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred CHHHHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 9987 33556789999985332222 355655554 78998888764
No 232
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.34 E-value=5.3e-12 Score=123.32 Aligned_cols=107 Identities=17% Similarity=0.222 Sum_probs=88.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-CCCcccEEEec-
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM- 233 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~- 233 (379)
++.+|||+|||+|..+..+++.. +..|+++|+|+.+++.+++++++.|+ .++.+.++|+..++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 38899999999999999999976 37999999999999999999999887 479999999988653 45789999972
Q ss_pred -----cccCCCCC----------------HHHHHHHHHHhcCCCCEEEEEecc
Q 016981 234 -----ESGEHMPD----------------KSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 234 -----~~l~~~~~----------------~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.++.+.++ ..++|.++.++|||||+|++++.+
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 23333222 146899999999999999998743
No 233
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.33 E-value=4.4e-12 Score=118.81 Aligned_cols=99 Identities=19% Similarity=0.113 Sum_probs=85.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++.. ++ .+.+|+|+|+|+.+++.|+++++.+++.+++.++.+|+.+.. ++||+|++.-..
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-- 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--
T ss_pred CCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--
Confidence 88999999999999999 87 477999999999999999999999988778999999998765 789999985321
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEeccC
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVTWCH 266 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~~~~ 266 (379)
....++..+.++|+|||.+++.++..
T Consensus 269 --~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 --FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp --TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred --hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 22478999999999999999987543
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.32 E-value=7.8e-12 Score=121.07 Aligned_cols=106 Identities=17% Similarity=0.247 Sum_probs=89.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--CCCCcccEEEe--
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWS-- 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~V~~-- 232 (379)
++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.++++++..++ ++.+..+|+.+.+ +++++||+|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 38899999999999999999987 47999999999999999999998886 4789999998875 55678999996
Q ss_pred ----ccccCCCCCH----------------HHHHHHHHHhcCCCCEEEEEecc
Q 016981 233 ----MESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 233 ----~~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.+++.+.++. ..+++++.++|||||++++++.+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 2345554543 47899999999999999998743
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.32 E-value=2.2e-12 Score=131.83 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=87.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEccCCCC-CCCCCcccEEEeccc-
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQ-PFPDGQFDLVWSMES- 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~-~~~~~~fD~V~~~~~- 235 (379)
+.+|||+|||+|.++..++.....+|+++|+|+.+++.|+++++.+++. .++.++++|+.+. +...++||+|++.-.
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 7899999999999999999864447999999999999999999999986 5899999998773 444578999998542
Q ss_pred ----------cCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 ----------GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 ----------l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+....+...++.++.++|+|||.|+++.
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2222345778999999999999999776
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.31 E-value=2.5e-12 Score=123.32 Aligned_cols=107 Identities=21% Similarity=0.177 Sum_probs=87.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC----CCCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~V~~~~ 234 (379)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.+++.++.+|+.+... ..++||+|++.-
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 7899999999999999999873349999999999999999999998885589999999876521 256899999853
Q ss_pred ccCCC---------CCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 235 SGEHM---------PDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 235 ~l~~~---------~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
..... .+...++.++.++|+|||.++++...
T Consensus 298 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 298 PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 32221 23467899999999999999888743
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.31 E-value=6e-12 Score=110.01 Aligned_cols=101 Identities=16% Similarity=0.192 Sum_probs=85.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||||||+|.++..+. .+.+|+|+|+++.+++.+++++...+. +..+.++|....+.+ ++||+|++.-+++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCC-CBCSEEEEESCHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCC-CCcchHHHHHHHH
Confidence 37899999999999999887 467999999999999999999988774 789999999887754 6899999999999
Q ss_pred CCCCH-HHHHHHHHHhcCCCCEEEEEe
Q 016981 238 HMPDK-SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~~~~~-~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+++. ...+-++...|+++|.++-..
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 98543 233448888999998877655
No 238
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.31 E-value=4.9e-12 Score=115.60 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=83.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--C-CCCeEEEEccCCCC-CCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG--L-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~-~~~~~~fD~V~~~ 233 (379)
+.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++...+ + .++++++.+|+.+. +..+++||+|++.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 6899999999999999999865 5799999999999999999875431 1 35899999998763 2235789999985
Q ss_pred cccCCCCC--H--HHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHMPD--K--SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~~~--~--~~~l~~~~r~LkpgG~l~i~~ 263 (379)
....+.+. . .+++++++++|||||.+++..
T Consensus 159 ~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 159 SSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 43322221 1 689999999999999999874
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.30 E-value=2.4e-12 Score=113.52 Aligned_cols=102 Identities=10% Similarity=0.100 Sum_probs=88.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||||||+|.++..++... ..+|+++|+++.+++.+++++..+|+ +..+.+.|....+ +.+.||+|++.-+++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 7799999999999999998875 67999999999999999999999886 4888999987655 468899999999999
Q ss_pred CCCCH--HHHHHHHHHhcCCCCEEEEEec
Q 016981 238 HMPDK--SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 238 ~~~~~--~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+++. ...+ ++...|+|+|.++-...
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 99654 3445 99999999999887763
No 240
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=4.5e-12 Score=120.86 Aligned_cols=104 Identities=23% Similarity=0.209 Sum_probs=82.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~~~~l~ 237 (379)
+.+|||+|||+|.++..+++. ++.|+++|+|+.+++.|+++++.+++. ..+.++|+.+. +...+.||+|++.-...
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 889999999999999999987 677999999999999999999998875 35668888764 22134499999864321
Q ss_pred CC---------CCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 238 HM---------PDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 238 ~~---------~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.- .+...++..+.++|||||+|++....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11 12357889999999999999977643
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.30 E-value=2.3e-11 Score=114.30 Aligned_cols=103 Identities=18% Similarity=0.234 Sum_probs=86.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~------~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~ 232 (379)
+.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...++ ++.+..+|.... ...++||+|++
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~-~~~~~fD~Ii~ 207 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN-LLVDPVDVVIS 207 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC-CCCCCEEEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc-cccCCccEEEE
Confidence 68999999999999999988762 6899999999999999999887776 688999998663 34578999999
Q ss_pred ccccCCCCCH------------------HHHHHHHHHhcCCCCEEEEEec
Q 016981 233 MESGEHMPDK------------------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~~~l~~~~~~------------------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+-.+++++.. ..++.++.+.|||||++++...
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 9777665432 2579999999999999988773
No 242
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.30 E-value=2.2e-12 Score=117.79 Aligned_cols=103 Identities=18% Similarity=0.267 Sum_probs=81.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CC--------CCCeEEEEccCCCC-CCCCCcc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GL--------ADKVSFQVGDALQQ-PFPDGQF 227 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~--------~~~i~~~~~d~~~~-~~~~~~f 227 (379)
+.+|||||||+|.++..+++....+|+++|+++.+++.|++++ .. ++ .++++++.+|+.+. +. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 6899999999999999999873359999999999999999987 33 22 36899999997653 22 5789
Q ss_pred cEEEeccccCCCC--C--HHHHHHHHHHhcCCCCEEEEEe
Q 016981 228 DLVWSMESGEHMP--D--KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 228 D~V~~~~~l~~~~--~--~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+|++......-+ . ...++++++++|||||.+++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865432111 1 2678999999999999998864
No 243
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.28 E-value=1.7e-12 Score=123.82 Aligned_cols=104 Identities=18% Similarity=0.111 Sum_probs=86.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC----CCCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD~V~~~~ 234 (379)
+.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++++.+++. ++.++.+|+.+... .+++||+|++.-
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 789999999999999999998 679999999999999999999998874 59999999877521 256899999853
Q ss_pred ccCCC---------CCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 235 SGEHM---------PDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 235 ~l~~~---------~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
..... .+...++.++.++|+|||.++++..
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 22111 2336789999999999999999874
No 244
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.28 E-value=3.1e-10 Score=106.77 Aligned_cols=187 Identities=18% Similarity=0.240 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHH--------c--------CCEEEEEeCCHHHHHHHHHH
Q 016981 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK--------F--------GAKCQGITLSPVQAQRANAL 200 (379)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~--------~--------~~~v~gvD~s~~~~~~a~~~ 200 (379)
....++++.++.+...........+|+|+|||+|..+..+... . ..+|+..|+........=+.
T Consensus 31 ~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~ 110 (374)
T 3b5i_A 31 SMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQL 110 (374)
T ss_dssp HHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhh
Confidence 3455677777766554321234689999999999988877332 1 23677777655443322111
Q ss_pred HHHc-----------CCCCCeEEEEc---cCCCCCCCCCcccEEEeccccCCCC--------------------------
Q 016981 201 AAAR-----------GLADKVSFQVG---DALQQPFPDGQFDLVWSMESGEHMP-------------------------- 240 (379)
Q Consensus 201 ~~~~-----------~~~~~i~~~~~---d~~~~~~~~~~fD~V~~~~~l~~~~-------------------------- 240 (379)
+... +...+-.|..+ .+....+|+++||+|+++.+||++.
T Consensus 111 L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~ 190 (374)
T 3b5i_A 111 LPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGE 190 (374)
T ss_dssp SCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCH
T ss_pred hhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCH
Confidence 1110 00001112222 2233357899999999999999986
Q ss_pred ------------CHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccc-----hHHHHHHHHH----------hhccCC
Q 016981 241 ------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQ-----PWEQELLKKI----------CDAYYL 293 (379)
Q Consensus 241 ------------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~----------~~~~~~ 293 (379)
|...+|+..++.|+|||+++++.....+..+....-. ......+... ...+..
T Consensus 191 ~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~ 270 (374)
T 3b5i_A 191 KTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNI 270 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCc
Confidence 3345688899999999999999876655322210000 0111111111 111333
Q ss_pred C-CCCCHHHHHHHHH-hCCCceeEEEecCCCc
Q 016981 294 P-AWCSTADYVKLLQ-SLSLEDIKAEDWSQNV 323 (379)
Q Consensus 294 ~-~~~~~~~~~~~l~-~aGF~~v~~~~~~~~~ 323 (379)
| ++.+.+++++.++ +.||++..++.+..+.
T Consensus 271 P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~ 302 (374)
T 3b5i_A 271 PVYAPSLQDFKEVVDANGSFAIDKLVVYKGGS 302 (374)
T ss_dssp CBCCCCHHHHHHHHHHHCSEEEEEEEEEECCC
T ss_pred cccCCCHHHHHHHHHhcCCcEEEEEEEEeecC
Confidence 3 3469999999998 5999998887665443
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.28 E-value=2.1e-12 Score=116.50 Aligned_cols=96 Identities=13% Similarity=0.004 Sum_probs=80.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEccCCCCCCCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (379)
+.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++... +. .+++++..+|+.+.. ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d-- 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL-- 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES--
T ss_pred CCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC--
Confidence 689999999999999999887 689999999999999998865321 11 258999999987754 789999986
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
..++..+++++.++|||||.+++..
T Consensus 147 ---~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 ---QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ---SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 3566779999999999999999864
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.27 E-value=1.9e-11 Score=111.36 Aligned_cols=113 Identities=19% Similarity=0.155 Sum_probs=83.3
Q ss_pred CCCEEEEeCCcc------cHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE-EEccCCCCCCCCCccc
Q 016981 158 RPKNVVDVGCGI------GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSF-QVGDALQQPFPDGQFD 228 (379)
Q Consensus 158 ~~~~vLDiGcGt------G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~-~~~d~~~~~~~~~~fD 228 (379)
++.+|||+|||+ |. ..+++.. +.+|+|+|+|+. + +++.+ +++|+.+++++ ++||
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~-~~fD 125 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTA-NKWD 125 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCS-SCEE
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCcc-Cccc
Confidence 488999999944 66 4455554 379999999987 1 36888 99999887764 7899
Q ss_pred EEEeccccCC--------C---CCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016981 229 LVWSMESGEH--------M---PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (379)
Q Consensus 229 ~V~~~~~l~~--------~---~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (379)
+|+++..... . .....+++++.++|||||++++..+...
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------------ 175 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------------ 175 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS------------------------------
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC------------------------------
Confidence 9998643221 1 1135899999999999999999764321
Q ss_pred CHHHHHHHHHhCCCceeEEE
Q 016981 298 STADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 298 ~~~~~~~~l~~aGF~~v~~~ 317 (379)
...++.+++++.||..++..
T Consensus 176 ~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp CCHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCcEEEEE
Confidence 12467788888999877664
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.26 E-value=1.9e-11 Score=112.50 Aligned_cols=87 Identities=18% Similarity=0.316 Sum_probs=69.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.++... +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. +++.++.+|+.+.
T Consensus 30 i~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 30 ILDKIIYAAKIKS-----SDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 4556666666544 889999999999999999987 67999999999999999999887766 5899999999887
Q ss_pred CCCCCcccEEEecccc
Q 016981 221 PFPDGQFDLVWSMESG 236 (379)
Q Consensus 221 ~~~~~~fD~V~~~~~l 236 (379)
++ ++||+|+++...
T Consensus 103 ~~--~~~D~Vv~n~py 116 (299)
T 2h1r_A 103 VF--PKFDVCTANIPY 116 (299)
T ss_dssp CC--CCCSEEEEECCG
T ss_pred Cc--ccCCEEEEcCCc
Confidence 65 479999986443
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.24 E-value=3.9e-12 Score=113.72 Aligned_cols=83 Identities=17% Similarity=0.276 Sum_probs=66.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.++... +.+|||+|||+|.++..++++ +.+|+|+|+|+.+++.+++++... +++.++.+|+.++
T Consensus 18 ~~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~ 88 (244)
T 1qam_A 18 NIDKIMTNIRLNE-----HDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHTTCCCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGC
T ss_pred HHHHHHHhCCCCC-----CCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhC
Confidence 5566666666544 889999999999999999998 589999999999999999887532 5899999999998
Q ss_pred CCCC-CcccEEEec
Q 016981 221 PFPD-GQFDLVWSM 233 (379)
Q Consensus 221 ~~~~-~~fD~V~~~ 233 (379)
++++ ..| .|+++
T Consensus 89 ~~~~~~~~-~vv~n 101 (244)
T 1qam_A 89 KFPKNQSY-KIFGN 101 (244)
T ss_dssp CCCSSCCC-EEEEE
T ss_pred CcccCCCe-EEEEe
Confidence 8764 345 34443
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.21 E-value=6e-10 Score=107.28 Aligned_cols=97 Identities=19% Similarity=0.301 Sum_probs=79.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (379)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++. +.|..+|+.+... .+||+|++.-.-..
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~--~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV--KGFDTVIVDPPRAG 365 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC--TTCSEEEECCCTTC
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc--cCCCEEEEcCCccc
Confidence 789999999999999999987 679999999999999999999988874 9999999988742 28999998543221
Q ss_pred CCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 239 MPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
. ...+++.+. .|+|||.++++.
T Consensus 366 ~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 L--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp S--CHHHHHHHH-HHCCSEEEEEES
T ss_pred h--HHHHHHHHH-hcCCCcEEEEEC
Confidence 1 134666654 599999998864
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.20 E-value=1.7e-10 Score=105.43 Aligned_cols=88 Identities=22% Similarity=0.256 Sum_probs=75.7
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
..++.+++.+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++... ++++++++|+.+
T Consensus 37 ~i~~~Iv~~l~~~~-----~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~ 107 (295)
T 3gru_A 37 NFVNKAVESANLTK-----DDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALK 107 (295)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTT
T ss_pred HHHHHHHHhcCCCC-----cCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhh
Confidence 36677777777655 889999999999999999998 789999999999999999998732 589999999999
Q ss_pred CCCCCCcccEEEecccc
Q 016981 220 QPFPDGQFDLVWSMESG 236 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l 236 (379)
.++++.+||.|+++...
T Consensus 108 ~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 108 VDLNKLDFNKVVANLPY 124 (295)
T ss_dssp SCGGGSCCSEEEEECCG
T ss_pred CCcccCCccEEEEeCcc
Confidence 88877789999977443
No 251
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.20 E-value=1.1e-11 Score=114.24 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=72.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHcCCCCCeEEEEc-cCCCCCCCCCcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITL----SPVQAQRANALAAARGLADKVSFQVG-DALQQPFPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~----s~~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fD~V~~ 232 (379)
++.+|||+|||+|.++..++++ .+|+|+|+ ++.+++.++ .+..+ .+++.+.++ |+..++ .++||+|++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~~~fD~V~s 154 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--PERCDTLLC 154 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--cCCCCEEEE
Confidence 4789999999999999999987 48999999 554432211 01111 146899988 887765 568999999
Q ss_pred ccccC---CCCCHH---HHHHHHHHhcCCCCEEEEEec
Q 016981 233 MESGE---HMPDKS---KFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~~~l~---~~~~~~---~~l~~~~r~LkpgG~l~i~~~ 264 (379)
..++. +..+.. .+|..+.++|||||.+++..+
T Consensus 155 d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 155 DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 76653 111222 578899999999999988654
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.18 E-value=1.4e-13 Score=123.26 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=85.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.++... +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..++++++.+|+.+.
T Consensus 17 ~~~~i~~~~~~~~-----~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 17 VLNQIIKQLNLKE-----TDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQF 87 (245)
T ss_dssp THHHHHHHCCCCS-----SEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTT
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhc
Confidence 4566677766554 889999999999999999998 5899999999999999887664 125799999999998
Q ss_pred CCCC-CcccEEEeccccC-----------CCCCHHHHH----HHHHHhcCCCCEEEEEe
Q 016981 221 PFPD-GQFDLVWSMESGE-----------HMPDKSKFV----SELARVTAPAGTIIIVT 263 (379)
Q Consensus 221 ~~~~-~~fD~V~~~~~l~-----------~~~~~~~~l----~~~~r~LkpgG~l~i~~ 263 (379)
++++ ++| .|+++-... |..+...++ +.+.|+|+|||.+.+..
T Consensus 88 ~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 88 QFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8763 678 566542211 122233344 66899999999987754
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.16 E-value=3.6e-10 Score=107.28 Aligned_cols=117 Identities=18% Similarity=0.102 Sum_probs=92.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-C--------------------------------------
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~-------------------------------------- 181 (379)
+...++...+..+ +..|||.+||+|.+++.++... +
T Consensus 182 LAaall~l~~~~~-----~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 182 MAAAIILLSNWFP-----DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp HHHHHHHHTTCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHhCCCC-----CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 4444566656554 7899999999999999888654 2
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC-CCC---CHHHHHHHHHHhcCC--
Q 016981 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE-HMP---DKSKFVSELARVTAP-- 255 (379)
Q Consensus 182 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~-~~~---~~~~~l~~~~r~Lkp-- 255 (379)
.+|+|+|+++.|++.|++++...|+.+++.+.++|+.+++.+ ++||+|+++--.. -+. +...+++++.+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 359999999999999999999999977899999999998764 5899999984432 222 335677777778876
Q ss_pred CCEEEEEe
Q 016981 256 AGTIIIVT 263 (379)
Q Consensus 256 gG~l~i~~ 263 (379)
||.+++..
T Consensus 336 g~~~~iit 343 (384)
T 3ldg_A 336 TWSQFILT 343 (384)
T ss_dssp TSEEEEEE
T ss_pred CcEEEEEE
Confidence 99988876
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=3.5e-10 Score=107.79 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=91.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-C--------------------------------------
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~-------------------------------------- 181 (379)
+...++...+... +..|||.+||+|.+++.++... +
T Consensus 189 lAa~ll~l~~~~~-----~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 189 MAAALVLLTSWHP-----DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHSCCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHhCCCC-----CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 4445566666554 7899999999999998888754 2
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC-C---CCHHHHHHHHHHhcCC--
Q 016981 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH-M---PDKSKFVSELARVTAP-- 255 (379)
Q Consensus 182 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~-~---~~~~~~l~~~~r~Lkp-- 255 (379)
.+|+|+|+++.|++.|++++...|+..++.+.++|+.+++.+ ++||+|+++--... + .+...+++++.+.||+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 359999999999999999999999877899999999998764 58999999844321 2 1234566666667766
Q ss_pred CCEEEEEe
Q 016981 256 AGTIIIVT 263 (379)
Q Consensus 256 gG~l~i~~ 263 (379)
||.+++..
T Consensus 343 g~~~~iit 350 (393)
T 3k0b_A 343 TWSVYVLT 350 (393)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 89888876
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.14 E-value=3e-10 Score=108.09 Aligned_cols=117 Identities=18% Similarity=0.177 Sum_probs=91.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-C--------------------------------------
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~-------------------------------------- 181 (379)
+...++...+... +.+|||++||+|.+++.++... +
T Consensus 183 lAa~ll~~~~~~~-----~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 183 LAAGLIYLTPWKA-----GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHTSCCCT-----TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHhhCCCC-----CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 4444556555544 7899999999999999988763 1
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccCC-C---CCHHHHHHHHHHhcCC--
Q 016981 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH-M---PDKSKFVSELARVTAP-- 255 (379)
Q Consensus 182 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~~-~---~~~~~~l~~~~r~Lkp-- 255 (379)
.+|+|+|+++.+++.|++++...|+..++.|.++|+.+++.+ ++||+|+++-.... + .+...+++++.+.||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 479999999999999999999999877899999999988654 68999999765432 2 1235677777777776
Q ss_pred CCEEEEEe
Q 016981 256 AGTIIIVT 263 (379)
Q Consensus 256 gG~l~i~~ 263 (379)
||.+++..
T Consensus 337 g~~~~iit 344 (385)
T 3ldu_A 337 NWSYYLIT 344 (385)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 88888876
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.11 E-value=3.5e-10 Score=109.96 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=85.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEccCCCCCCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--------------GAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPFP 223 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~ 223 (379)
+.+|||.|||+|.++..+++.. +.+++|+|+++.+++.|+.++...|+.. ++.+.++|....+..
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~ 251 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS 251 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc
Confidence 7899999999999998888752 3579999999999999999988777642 677899998776543
Q ss_pred CCcccEEEeccccCCCCC-----------------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 224 DGQFDLVWSMESGEHMPD-----------------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~-----------------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
++||+|+++-.+.+... ...++..+.++|||||+++++.
T Consensus 252 -~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 252 -TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp -SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 48999999866655321 1378999999999999998876
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.11 E-value=2.8e-10 Score=107.88 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcc
Q 016981 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (379)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d 216 (379)
....++..+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.+++ ++++|+.+|
T Consensus 198 ~~~~l~~~~~~~~~~~------~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d 269 (369)
T 3bt7_A 198 MNIQMLEWALDVTKGS------KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHHTTTC------CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCC
T ss_pred HHHHHHHHHHHHhhcC------CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECC
Confidence 3455667777766432 568999999999999999885 57999999999999999999999888 589999999
Q ss_pred CCCCC--CCC--------------CcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 217 ALQQP--FPD--------------GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 217 ~~~~~--~~~--------------~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+.+.. +.. .+||+|++.--- ..+..++.+.|+++|++++..
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 270 AEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp SHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEE
T ss_pred HHHHHHHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEE
Confidence 87641 221 379999864211 123456777788999988876
No 258
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=1.4e-09 Score=100.17 Aligned_cols=105 Identities=13% Similarity=0.103 Sum_probs=80.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCC---CcccEEEe
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD---GQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~fD~V~~ 232 (379)
++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++++.|+ .++.++.+|+.+++... ++||.|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCccccccCCCCEEEE
Confidence 38899999999999999999875 36999999999999999999999887 58999999998764321 57999996
Q ss_pred c------cccCCCC-----------CH-------HHHHHHHHHhcCCCCEEEEEec
Q 016981 233 M------ESGEHMP-----------DK-------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~------~~l~~~~-----------~~-------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
. .++..-+ +. .++|..+.++|+ ||+|+.++-
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 2 2222211 11 246777888887 998888763
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=4.4e-10 Score=100.74 Aligned_cols=83 Identities=14% Similarity=0.192 Sum_probs=68.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.++..+ +.+|||||||+|.++..+++. +.+|+|+|+++.|++.+++++.. .++++++++|+.+.
T Consensus 17 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 17 VLQKIVSAIHPQK-----TDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhC
Confidence 5666777777665 889999999999999999987 68999999999999999998864 25899999999998
Q ss_pred CCCC----CcccEEEec
Q 016981 221 PFPD----GQFDLVWSM 233 (379)
Q Consensus 221 ~~~~----~~fD~V~~~ 233 (379)
++++ ++|| |+++
T Consensus 88 ~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CGGGSCCSSCEE-EEEE
T ss_pred CHHHhccCCCeE-EEec
Confidence 7543 5688 5544
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.05 E-value=3.5e-10 Score=107.25 Aligned_cols=101 Identities=13% Similarity=0.009 Sum_probs=84.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCC-eEEEEccCCCC-C-CCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADK-VSFQVGDALQQ-P-FPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~-i~~~~~d~~~~-~-~~~~~fD~V~~~ 233 (379)
+.+|||++||+|.++..++.+. | .+|+++|+++.+++.++++++.+++.++ +.++.+|+.+. . ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 7899999999999999999875 4 5899999999999999999999998655 99999998654 2 224679999976
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
- ......++..+.+.|+|||.|+++.
T Consensus 133 P----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 2233678999999999999888765
No 261
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.04 E-value=7.7e-10 Score=104.83 Aligned_cols=100 Identities=14% Similarity=0.039 Sum_probs=82.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc---------------CCCCCeEEEEccCCCCC-
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR---------------GLADKVSFQVGDALQQP- 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---------------~~~~~i~~~~~d~~~~~- 221 (379)
+.+|||+|||+|..+..++.+. +.+|+++|+++.+++.++++++.+ ++. ++.+..+|+....
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHHH
Confidence 7899999999999999999986 568999999999999999999988 763 4999999987652
Q ss_pred CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
...+.||+|++. .. .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lD-P~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLD-PF---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEEC-CS---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeC-CC---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 113579999953 22 234788999999999999887764
No 262
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.01 E-value=5.3e-09 Score=98.51 Aligned_cols=160 Identities=15% Similarity=0.171 Sum_probs=102.2
Q ss_pred CCEEEEeCCcccHHHHHHHHH-------------c-----CCEEEEEeCC-----------HHHHHHHHHHHHHcCCCCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKK-------------F-----GAKCQGITLS-----------PVQAQRANALAAARGLADK 209 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~-------------~-----~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~ 209 (379)
..+|+|+||++|..+..+... . ..+|+..|+. +.+.+.+++ ..|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 589999999999998877765 1 2468888987 444443322 1221113
Q ss_pred eEEEEccCCC---CCCCCCcccEEEeccccCCCCCHH---------------------------------------HHHH
Q 016981 210 VSFQVGDALQ---QPFPDGQFDLVWSMESGEHMPDKS---------------------------------------KFVS 247 (379)
Q Consensus 210 i~~~~~d~~~---~~~~~~~fD~V~~~~~l~~~~~~~---------------------------------------~~l~ 247 (379)
..|..+.... ..||++++|+|+++.+||++.+.. .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566655444 468899999999999999985432 1256
Q ss_pred HHHHhcCCCCEEEEEeccCCCC--CCCcc-ccchHHHHHHHH------HhhccCCC-CCCCHHHHHHHHHhCC-CceeEE
Q 016981 248 ELARVTAPAGTIIIVTWCHRDL--APSEE-SLQPWEQELLKK------ICDAYYLP-AWCSTADYVKLLQSLS-LEDIKA 316 (379)
Q Consensus 248 ~~~r~LkpgG~l~i~~~~~~~~--~~~~~-~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~l~~aG-F~~v~~ 316 (379)
..++.|+|||++++.....++. .+... .+...+..+..+ -...+..| ++.+.++++.++++.| |++...
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 6689999999999998776553 21111 111111111111 11223334 3569999999999985 888887
Q ss_pred EecCC
Q 016981 317 EDWSQ 321 (379)
Q Consensus 317 ~~~~~ 321 (379)
+.+..
T Consensus 290 e~~~~ 294 (384)
T 2efj_A 290 ETFNA 294 (384)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 65543
No 263
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.01 E-value=9.6e-10 Score=106.02 Aligned_cols=108 Identities=17% Similarity=0.237 Sum_probs=81.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
+.+.+++.+... ++.+|||+|||+|.++..++++. +.+++|+|+++.+++.| .++.+.++|+.
T Consensus 27 l~~~~~~~~~~~-----~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~ 91 (421)
T 2ih2_A 27 VVDFMVSLAEAP-----RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFL 91 (421)
T ss_dssp HHHHHHHHCCCC-----TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGG
T ss_pred HHHHHHHhhccC-----CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChh
Confidence 444555555432 26699999999999999999874 57999999999998765 37899999988
Q ss_pred CCCCCCCcccEEEeccccCC----------CCCH-------------------HHHHHHHHHhcCCCCEEEEEec
Q 016981 219 QQPFPDGQFDLVWSMESGEH----------MPDK-------------------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~----------~~~~-------------------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.... .++||+|+++-.... +.+. ..+++.+.++|+|||++++...
T Consensus 92 ~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 92 LWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp GCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 7643 478999999632221 2111 2568899999999999998874
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.01 E-value=7.1e-10 Score=100.15 Aligned_cols=85 Identities=21% Similarity=0.174 Sum_probs=70.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
.++.+++.+++.+ + +|||||||+|.++..+++. +.+|+|+|+++.+++.+++++.. .+++++++|+.+.
T Consensus 35 i~~~Iv~~~~~~~-----~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~ 103 (271)
T 3fut_A 35 HLRRIVEAARPFT-----G-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHHCCCC-----S-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGS
T ss_pred HHHHHHHhcCCCC-----C-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhC
Confidence 5667777777665 7 9999999999999999998 68999999999999999998752 5899999999988
Q ss_pred CCCCC-cccEEEecccc
Q 016981 221 PFPDG-QFDLVWSMESG 236 (379)
Q Consensus 221 ~~~~~-~fD~V~~~~~l 236 (379)
++++. .+|.|+++...
T Consensus 104 ~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 104 PWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CGGGSCTTEEEEEEECS
T ss_pred ChhhccCccEEEecCcc
Confidence 76542 68888876543
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.99 E-value=5.6e-10 Score=103.85 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=80.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC---CC----CCeEEEEccCCCCC--C--CCCc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG---LA----DKVSFQVGDALQQP--F--PDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~----~~i~~~~~d~~~~~--~--~~~~ 226 (379)
.+.+||+||||+|.+++.+++....+|+++|+++.+++.|++++...+ +. ++++++.+|+...- . ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 478999999999999999988755789999999999999999875321 11 27999999987642 1 3578
Q ss_pred ccEEEecccc-CC--CC---CHHHHHHHH----HHhcCCCCEEEEEe
Q 016981 227 FDLVWSMESG-EH--MP---DKSKFVSEL----ARVTAPAGTIIIVT 263 (379)
Q Consensus 227 fD~V~~~~~l-~~--~~---~~~~~l~~~----~r~LkpgG~l~i~~ 263 (379)
||+|++.-.- .. .+ -..++++.+ .++|+|||.+++..
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 9999986432 11 11 225666766 89999999998865
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.98 E-value=7.5e-10 Score=101.54 Aligned_cols=87 Identities=21% Similarity=0.242 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
+++++++.+...+ +.+|||+|||+|..+..+++++ +.+|+|+|+|+.|++.|+++++..+ .++.++++|+.+
T Consensus 14 Ll~e~l~~L~~~~-----g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~ 86 (301)
T 1m6y_A 14 MVREVIEFLKPED-----EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYRE 86 (301)
T ss_dssp THHHHHHHHCCCT-----TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGG
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHH
Confidence 4566667666554 8899999999999999999987 6899999999999999999988766 589999999987
Q ss_pred CC--CC---CCcccEEEecc
Q 016981 220 QP--FP---DGQFDLVWSME 234 (379)
Q Consensus 220 ~~--~~---~~~fD~V~~~~ 234 (379)
++ +. .++||.|++..
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHHhcCCCCCCEEEEcC
Confidence 64 21 15799999754
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.93 E-value=2.1e-10 Score=103.08 Aligned_cols=79 Identities=24% Similarity=0.319 Sum_probs=65.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-CCC--Ccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSP-------VQAQRANALAAARGLADKVSFQVGDALQQ-P-FPD--GQF 227 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~-------~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~~--~~f 227 (379)
+.+|||+|||+|..+..++.. +.+|+|+|+|+ .+++.|+++.+.+++..++.++.+|+.+. + +++ ++|
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred cCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 689999999999999999997 77999999999 99999998887766655699999998874 3 444 789
Q ss_pred cEEEeccccCC
Q 016981 228 DLVWSMESGEH 238 (379)
Q Consensus 228 D~V~~~~~l~~ 238 (379)
|+|++.-++.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999766655
No 268
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.91 E-value=4.5e-08 Score=83.92 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=78.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEEccCCCC---------------C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL--ADKVSFQVGDALQQ---------------P 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~---------------~ 221 (379)
..+|||+||| ..+..+++..+++|+.+|.++...+.|+++++..|+ ..+++++.+|+.+. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 7899999984 677777774368999999999999999999999987 78999999996542 1
Q ss_pred --------C-CCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 222 --------F-PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 222 --------~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
. ..++||+|+.-.- .....+..+.+.|+|||.+++-+
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1378999998652 22466777889999999986633
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.89 E-value=1.1e-08 Score=104.56 Aligned_cols=118 Identities=19% Similarity=0.217 Sum_probs=87.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc----------------------------------------
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF---------------------------------------- 180 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~---------------------------------------- 180 (379)
+...++...+... +..|||.+||+|.+++.++...
T Consensus 178 LAa~ll~~~~~~~-----~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 178 LAAAIVMRSGWQP-----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp HHHHHHHHTTCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCC-----CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 4444556655543 7899999999999998877642
Q ss_pred ---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC--CCCCCcccEEEeccccCC-CC---CHHHHHH---H
Q 016981 181 ---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMESGEH-MP---DKSKFVS---E 248 (379)
Q Consensus 181 ---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~V~~~~~l~~-~~---~~~~~l~---~ 248 (379)
...++|+|+++.+++.|+.++...|+...+.|.++|+.++ |...++||+|+++=-... +. +...+++ +
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 1579999999999999999999999977799999999887 333448999999844321 11 2233444 4
Q ss_pred HHHhcCCCCEEEEEe
Q 016981 249 LARVTAPAGTIIIVT 263 (379)
Q Consensus 249 ~~r~LkpgG~l~i~~ 263 (379)
+.+.+.|||.+++..
T Consensus 333 ~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 333 IMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHCTTCEEEEEE
T ss_pred HHHhhCCCCeEEEEe
Confidence 455566899998876
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.86 E-value=5.9e-09 Score=94.58 Aligned_cols=72 Identities=18% Similarity=0.297 Sum_probs=61.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCE----EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcc
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAK----CQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~----v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d 216 (379)
.++.+++.++... +.+|||||||+|.++..+++.. .. |+|+|+|+.|++.++++. ..+++++++|
T Consensus 30 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~~La~~~-~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D 98 (279)
T 3uzu_A 30 VIDAIVAAIRPER-----GERMVEIGPGLGALTGPVIARL-ATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGD 98 (279)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTSTTHHHHHHHH-CBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEccccHHHHHHHHHhC-CCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECC
Confidence 5566777776655 8899999999999999999874 45 999999999999999983 2589999999
Q ss_pred CCCCCCC
Q 016981 217 ALQQPFP 223 (379)
Q Consensus 217 ~~~~~~~ 223 (379)
+.+++++
T Consensus 99 ~~~~~~~ 105 (279)
T 3uzu_A 99 ALTFDFG 105 (279)
T ss_dssp GGGCCGG
T ss_pred hhcCChh
Confidence 9998764
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.85 E-value=1.7e-08 Score=90.12 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=72.2
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
..++.+++.++... +.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++ . ..+++++++|+.+
T Consensus 18 ~i~~~iv~~~~~~~-----~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 18 GVLKKIAEELNIEE-----GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTT
T ss_pred HHHHHHHHhcCCCC-----cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhh
Confidence 35667777776654 889999999999999999987337999999999999999876 1 2589999999999
Q ss_pred CCCCCCcccEEEeccccCCCCCHHHHHHHHHH
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELAR 251 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r 251 (379)
.++++..-+.++..+.-+++. ..++.++.+
T Consensus 88 ~~~~~~~~~~~vv~NlPy~i~--~~il~~ll~ 117 (249)
T 3ftd_A 88 FPFCSLGKELKVVGNLPYNVA--SLIIENTVY 117 (249)
T ss_dssp CCGGGSCSSEEEEEECCTTTH--HHHHHHHHH
T ss_pred CChhHccCCcEEEEECchhcc--HHHHHHHHh
Confidence 876542113333344444442 334444444
No 272
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.84 E-value=2.8e-08 Score=99.18 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=76.6
Q ss_pred CCEEEEeCCcccHHHHHH---HHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYL---AKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l---~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~ 233 (379)
...|||+|||+|.++... +++.+. +|++||-|+ +...|++..+.+++.++|+++.+|+++...| +++|+||+=
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 568999999999994443 343333 689999997 6667888888899989999999999998765 789999963
Q ss_pred cccCCC--CCHHHHHHHHHHhcCCCCEEE
Q 016981 234 ESGEHM--PDKSKFVSELARVTAPAGTII 260 (379)
Q Consensus 234 ~~l~~~--~~~~~~l~~~~r~LkpgG~l~ 260 (379)
.+=..+ +....++....|.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 322222 223467888889999999864
No 273
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.83 E-value=1.1e-08 Score=95.52 Aligned_cols=162 Identities=14% Similarity=0.127 Sum_probs=104.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHH----------------c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC---
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKK----------------F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA--- 217 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~----------------~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~--- 217 (379)
...+|+|+||++|..+..+... . ..+|+..|+.......+-+.+.......+..|..+..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3578999999999876654432 1 2478999998887776665543210001234555443
Q ss_pred CCCCCCCCcccEEEeccccCCCCCH---------------------------------HHHHHHHHHhcCCCCEEEEEec
Q 016981 218 LQQPFPDGQFDLVWSMESGEHMPDK---------------------------------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~---------------------------------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
....||++++|+|+++.+||++.+. ..+|+..++.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 3356889999999999999998542 2348888999999999999987
Q ss_pred cCCCCCCCcc---ccchHHHHHHHHHh----------hccCCC-CCCCHHHHHHHHHhCC-CceeEEEec
Q 016981 265 CHRDLAPSEE---SLQPWEQELLKKIC----------DAYYLP-AWCSTADYVKLLQSLS-LEDIKAEDW 319 (379)
Q Consensus 265 ~~~~~~~~~~---~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~l~~aG-F~~v~~~~~ 319 (379)
..++..+... .+.......+.... ..+..| ++.+.++++..+++.| |++...+.+
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 6655432111 11222222222111 122333 3568999999999996 577766544
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.83 E-value=2.9e-09 Score=101.27 Aligned_cols=73 Identities=21% Similarity=0.124 Sum_probs=64.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCeEEEEccCCCC-CC-CCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GLADKVSFQVGDALQQ-PF-PDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~i~~~~~d~~~~-~~-~~~~fD~V~~~ 233 (379)
+.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++++.. |+ .+++++++|+.+. +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 789999999999999999887 679999999999999999999987 77 6899999999874 32 24689999984
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.82 E-value=1e-08 Score=101.78 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=83.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-------------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-------------------GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVG 215 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~i~~~~~ 215 (379)
+.+|||.|||+|.++..+++.. ...++|+|+++.++..|+.++...++.. +..+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 7899999999999998887653 1379999999999999999988777643 2778899
Q ss_pred cCCCCC-CCCCcccEEEeccccCCCCC--------------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 216 DALQQP-FPDGQFDLVWSMESGEHMPD--------------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 216 d~~~~~-~~~~~fD~V~~~~~l~~~~~--------------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|....+ ...+.||+|+++-.+..... ...++..+.+.|||||+++++.
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 976543 34578999999755543321 2478999999999999998876
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.80 E-value=1.4e-08 Score=101.15 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=75.2
Q ss_pred CCEEEEeCCcccHHHHHH---HHHcC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC-
Q 016981 159 PKNVVDVGCGIGGSSRYL---AKKFG-----------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP- 223 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l---~~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~- 223 (379)
...|||+|||+|.++... ++..+ .+|++||.++.+....+.+.. +++.++|+++.+|+++...+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 568999999999996432 22112 389999999987766666554 67878899999999997653
Q ss_pred ----CCcccEEEeccccCCCCC---HHHHHHHHHHhcCCCCEEE
Q 016981 224 ----DGQFDLVWSMESGEHMPD---KSKFVSELARVTAPAGTII 260 (379)
Q Consensus 224 ----~~~fD~V~~~~~l~~~~~---~~~~l~~~~r~LkpgG~l~ 260 (379)
.++.|+|++=.+ ..+.+ ..+.|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 578999997544 44432 2478888899999999754
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.79 E-value=4.3e-09 Score=94.20 Aligned_cols=96 Identities=23% Similarity=0.241 Sum_probs=68.9
Q ss_pred CEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-------C-CCCCeEEEEccCCCC-CCCCCcccEE
Q 016981 160 KNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-------G-LADKVSFQVGDALQQ-PFPDGQFDLV 230 (379)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~-~~~~i~~~~~d~~~~-~~~~~~fD~V 230 (379)
.+|||+|||+|..+..++.+ +++|+++|+++.+.+.+++.++.. + +..+++++++|+.+. +...++||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 89999999999999999998 679999999998877766655432 1 224699999998763 3223479999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCC
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAG 257 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG 257 (379)
++.-.+.+ .....++++..++|++.+
T Consensus 169 ~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 169 YLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EECCCCCC-CCC-----HHHHHHHHHS
T ss_pred EEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 98876655 333456667777777755
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.76 E-value=9.6e-09 Score=92.01 Aligned_cols=127 Identities=19% Similarity=0.186 Sum_probs=85.5
Q ss_pred CCEEEEeCCcccHHHHHHHHH-------cC------CEEEEEeCCH---HHHH-----------HHHHHHHHcC------
Q 016981 159 PKNVVDVGCGIGGSSRYLAKK-------FG------AKCQGITLSP---VQAQ-----------RANALAAARG------ 205 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~-------~~------~~v~gvD~s~---~~~~-----------~a~~~~~~~~------ 205 (379)
..+|||+|+|+|..+..+++. .. .+++++|..| .++. .|++.++...
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 679999999999988776654 21 4899999776 4444 5566555310
Q ss_pred ----C---CCCeEEEEccCCC-CCC-CC---CcccEEEecc-ccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCC
Q 016981 206 ----L---ADKVSFQVGDALQ-QPF-PD---GQFDLVWSME-SGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLA 270 (379)
Q Consensus 206 ----~---~~~i~~~~~d~~~-~~~-~~---~~fD~V~~~~-~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 270 (379)
+ ..++++..+|+.+ ++. ++ ..||+|+.-. .-..-++ ...+++.++++|||||.|+. ++.
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa---- 214 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS---- 214 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC----
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC----
Confidence 1 1357788999876 342 22 2799999742 1111222 26899999999999999874 221
Q ss_pred CCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEec
Q 016981 271 PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
...+++.|+++||++.....+
T Consensus 215 ----------------------------a~~vrr~L~~aGF~v~~~~g~ 235 (257)
T 2qy6_A 215 ----------------------------AGFVRRGLQEAGFTMQKRKGF 235 (257)
T ss_dssp ----------------------------BHHHHHHHHHHTEEEEEECCS
T ss_pred ----------------------------CHHHHHHHHHCCCEEEeCCCC
Confidence 124678889999998765433
No 279
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.70 E-value=8.5e-08 Score=86.84 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=83.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--C--CCCCeEEEEccCCCC-CCCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--G--LADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~--~~~~i~~~~~d~~~~-~~~~~~fD~V~~ 232 (379)
+.+||-||.|.|..++.+++.. ..+|+.+|+++..++.+++.+... + -.++++++.+|.... .-..++||+|+.
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 7899999999999999999865 468999999999999999987542 1 136899999998775 344678999996
Q ss_pred ccccCCCC----CHHHHHHHHHHhcCCCCEEEEEe
Q 016981 233 MESGEHMP----DKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~~~----~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
-..=..-+ -..++++.+++.|+|||.++...
T Consensus 164 D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp SCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred eCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 43211111 11689999999999999998865
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.70 E-value=9.8e-09 Score=91.79 Aligned_cols=87 Identities=17% Similarity=0.159 Sum_probs=64.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAK--CQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~--v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
.++.+++.++..+ +.+|||||||+|.++. +. + +.+ |+|+|+++.|++.+++++... ++++++++|+.
T Consensus 9 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~ 77 (252)
T 1qyr_A 9 VIDSIVSAINPQK-----GQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAM 77 (252)
T ss_dssp HHHHHHHHHCCCT-----TCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGG
T ss_pred HHHHHHHhcCCCC-----cCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchh
Confidence 5566667666654 7899999999999999 65 4 456 999999999999999876432 47999999999
Q ss_pred CCCCCC-----CcccEEEeccccCCC
Q 016981 219 QQPFPD-----GQFDLVWSMESGEHM 239 (379)
Q Consensus 219 ~~~~~~-----~~fD~V~~~~~l~~~ 239 (379)
++++++ +..|.|+++- -+++
T Consensus 78 ~~~~~~~~~~~~~~~~vvsNl-PY~i 102 (252)
T 1qyr_A 78 TFNFGELAEKMGQPLRVFGNL-PYNI 102 (252)
T ss_dssp GCCHHHHHHHHTSCEEEEEEC-CTTT
T ss_pred hCCHHHhhcccCCceEEEECC-CCCc
Confidence 877542 1235666553 3344
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.67 E-value=7.4e-08 Score=95.44 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=80.3
Q ss_pred CEEEEeCCcccHHHHHHHHHc----------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-C
Q 016981 160 KNVVDVGCGIGGSSRYLAKKF----------------GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-F 222 (379)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~----------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~ 222 (379)
.+|||.+||||.+...+++.. ...++|+|+++.++..|+.++...|+..++.+.++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 399999999999988775432 34799999999999999999988887655555778866543 4
Q ss_pred CCCcccEEEeccccCC-------------------------CCC----HHHHHHHHHHhcCCCCEEEEEe
Q 016981 223 PDGQFDLVWSMESGEH-------------------------MPD----KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~~-------------------------~~~----~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
++.+||+|+++=-+.. ++. ...++..+.+.|||||+++++.
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 5678999999644432 111 1368999999999999988876
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.61 E-value=1.2e-07 Score=84.23 Aligned_cols=116 Identities=14% Similarity=0.131 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
.+.++.+...+. ++.+|||+|||+|.|+..++++.+ ..|+|+|++..+....... ...+ .++.....+++.
T Consensus 62 KL~ei~ek~~l~-----~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv 133 (277)
T 3evf_A 62 KLRWFHERGYVK-----LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDI 133 (277)
T ss_dssp HHHHHHHTTSSC-----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCT
T ss_pred HHHHHHHhCCCC-----CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEecccee
Confidence 455555553333 378999999999999999887643 4688888874331100000 0001 145556666655
Q ss_pred CCCCCCcccEEEeccccCCCCCH-------HHHHHHHHHhcCCC-CEEEEEecc
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA-GTIIIVTWC 265 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg-G~l~i~~~~ 265 (379)
..+++++||+|++..+.. .... ..+|+.+.++|||| |.+++-.+.
T Consensus 134 ~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 567778999999976555 3332 13568889999999 999996643
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.61 E-value=4.5e-07 Score=89.67 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=84.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEccCCCC--C-CCCCcccE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF----GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQ--P-FPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~--~-~~~~~fD~ 229 (379)
++.+|||.+||+|.+...+++.. ...++|+|+++.+...|+.++...|+. +++.+.++|.... | .....||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 47899999999999998888774 468999999999999999998888774 4688999998765 3 34678999
Q ss_pred EEeccccCC-------------------CC---C-HHHHHHHHHHhcC-CCCEEEEEe
Q 016981 230 VWSMESGEH-------------------MP---D-KSKFVSELARVTA-PAGTIIIVT 263 (379)
Q Consensus 230 V~~~~~l~~-------------------~~---~-~~~~l~~~~r~Lk-pgG~l~i~~ 263 (379)
|+++=-+.. ++ + ...++..+.+.|| |||++.++.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 998732210 10 0 1348999999999 999998876
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.41 E-value=8.4e-07 Score=80.13 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=80.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc------CCEEEEEeCCHH--------------------------HHHHHHHHHHHcCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF------GAKCQGITLSPV--------------------------QAQRANALAAARGL 206 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~------~~~v~gvD~s~~--------------------------~~~~a~~~~~~~~~ 206 (379)
+.+|||+|+..|..+..++... +.+|+++|.... .++.+++++++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 6799999999999988887643 468999996421 46778999999998
Q ss_pred C-CCeEEEEccCCC-CC-CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 207 A-DKVSFQVGDALQ-QP-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 207 ~-~~i~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
. ++++++.+|+.+ ++ +++++||+|+.-.-. .......|..+...|+|||.+++-++
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 4 899999999866 33 445789999976532 12235789999999999999888553
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.37 E-value=8.6e-07 Score=79.24 Aligned_cols=85 Identities=18% Similarity=0.212 Sum_probs=69.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
+++++++.+.+.+ +..+||.+||.|..+..++++ +++|+|+|.++.+++.|++ +.. +++.++++|+.++
T Consensus 10 Ll~e~le~L~~~~-----gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l 78 (285)
T 1wg8_A 10 LYQEALDLLAVRP-----GGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHL 78 (285)
T ss_dssp THHHHHHHHTCCT-----TCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGH
T ss_pred HHHHHHHhhCCCC-----CCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchH
Confidence 5677788777654 889999999999999999998 7899999999999999998 633 4899999999876
Q ss_pred C-----CCCCcccEEEecccc
Q 016981 221 P-----FPDGQFDLVWSMESG 236 (379)
Q Consensus 221 ~-----~~~~~fD~V~~~~~l 236 (379)
+ ...+++|.|++...+
T Consensus 79 ~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHcCCCCcCEEEeCCcc
Confidence 3 223579999975443
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.34 E-value=2.8e-07 Score=82.01 Aligned_cols=116 Identities=17% Similarity=0.078 Sum_probs=74.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
.+.++.+...+. ++.+|||+|||.|.|+..++++.+ ..|+|+|++..+...+... ...+ .++.....++..
T Consensus 78 KL~ei~eK~~Lk-----~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv 149 (282)
T 3gcz_A 78 KLRWMEERGYVK-----PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDV 149 (282)
T ss_dssp HHHHHHHTTSCC-----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCG
T ss_pred HHHHHHHhcCCC-----CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcch
Confidence 455555544444 378999999999999999887653 4789999986532221100 0001 133344433333
Q ss_pred CCCCCCcccEEEeccccCCCCCH-------HHHHHHHHHhcCCC--CEEEEEecc
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA--GTIIIVTWC 265 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg--G~l~i~~~~ 265 (379)
..++.+++|+|++..... .... ..+|.-+.++|+|| |.+++-.+.
T Consensus 150 ~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 150 FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hhcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 345578899999976665 4332 13566678999999 999997653
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.33 E-value=1e-06 Score=89.20 Aligned_cols=106 Identities=8% Similarity=0.014 Sum_probs=74.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC----CEEEEEeCCHHHHHHH--HHHHHH----cCCCCCeEEEEccCCCC-CCCCCc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG----AKCQGITLSPVQAQRA--NALAAA----RGLADKVSFQVGDALQQ-PFPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~----~~v~gvD~s~~~~~~a--~~~~~~----~~~~~~i~~~~~d~~~~-~~~~~~ 226 (379)
++.+|||.|||+|.++..+++..+ .+++|+|+++.+++.| +.++.. .+. ....+...|+... +...+.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGCCGGGGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcccccccCC
Confidence 378999999999999999988753 4799999999999999 433322 122 1234555565543 234578
Q ss_pred ccEEEeccccCC-CC---------------------------C-HHHHHHHHHHhcCCCCEEEEEec
Q 016981 227 FDLVWSMESGEH-MP---------------------------D-KSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~-~~---------------------------~-~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
||+|+++=-+.. .. + ...++..+.+.|+|||++++...
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 999999755421 11 1 13467889999999999998763
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.32 E-value=1.7e-06 Score=80.98 Aligned_cols=108 Identities=17% Similarity=0.165 Sum_probs=83.4
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC-----CCeEEEEccCCCCC-CCCCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLA-----DKVSFQVGDALQQP-FPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~i~~~~~d~~~~~-~~~~~fD~V 230 (379)
++.+|||+.+|.|.=+..++... +..|+++|+++.-++..++++++.+.. .++.+...|...++ ...+.||.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 48999999999999999998875 457999999999999999999877642 46888888887753 345789999
Q ss_pred Ee----cc----ccCCCCC----------------HHHHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WS----ME----SGEHMPD----------------KSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~----~~----~l~~~~~----------------~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
++ +. ++..-++ ..++|..+.+.|||||+|+.++-+
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 95 22 1111111 136788899999999999988743
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.30 E-value=1.2e-06 Score=70.02 Aligned_cols=88 Identities=17% Similarity=0.163 Sum_probs=64.4
Q ss_pred CCEEEEeCCccc-HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCC-CcccEEEecccc
Q 016981 159 PKNVVDVGCGIG-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD-GQFDLVWSMESG 236 (379)
Q Consensus 159 ~~~vLDiGcGtG-~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fD~V~~~~~l 236 (379)
+.+|||||||.| ..+..|++..+..|+++|+++..++ ++..|+.+....- +.||+|++...
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~~~DLIYsirP- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEIYRGAALIYSIRP- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHHHTTEEEEEEESC-
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcccccCCcCEEEEcCC-
Confidence 679999999999 6999999855889999999985432 7888887743211 47999987543
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEeccCC
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~ 267 (379)
-++....+.++++. -|.-++|.....+
T Consensus 99 --P~El~~~i~~lA~~--v~adliI~pL~~E 125 (153)
T 2k4m_A 99 --PAEIHSSLMRVADA--VGARLIIKPLTGE 125 (153)
T ss_dssp --CTTTHHHHHHHHHH--HTCEEEEECBTTB
T ss_pred --CHHHHHHHHHHHHH--cCCCEEEEcCCCC
Confidence 34557777777774 3667777665443
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.20 E-value=3e-06 Score=78.76 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=65.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
++.+|||+||+.|.|+..++++ ++.|++||+.+ |-.... . .+++.+...|+.....+.++||+|+|-.+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~~~l~----~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-- 279 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MAQSLM----D---TGQVTWLREDGFKFRPTRSNISWMVCDMV-- 279 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CCHHHH----T---TTCEEEECSCTTTCCCCSSCEEEEEECCS--
T ss_pred CCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cChhhc----c---CCCeEEEeCccccccCCCCCcCEEEEcCC--
Confidence 5999999999999999999988 78999999864 211111 1 25899999999887666678999998643
Q ss_pred CCCCHHHHHHHHHHhcCCC
Q 016981 238 HMPDKSKFVSELARVTAPA 256 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~Lkpg 256 (379)
.++..++.-+.+.|..|
T Consensus 280 --~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 --EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp --SCHHHHHHHHHHHHHTT
T ss_pred --CChHHhHHHHHHHHhcc
Confidence 34566666666666555
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.11 E-value=4.5e-06 Score=74.69 Aligned_cols=116 Identities=17% Similarity=0.154 Sum_probs=71.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
.+.++.+. .+-. ++.+|||+||++|.|+..++++.+ ..|+|+|+...+...... ... ...++.....++..
T Consensus 69 KL~ei~ek-~l~~----~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~--~~~~iv~~~~~~di 140 (300)
T 3eld_A 69 KIRWLHER-GYLR----ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT--LGWNIVKFKDKSNV 140 (300)
T ss_dssp HHHHHHHH-TSCC----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB--TTGGGEEEECSCCT
T ss_pred HHHHHHHh-CCCC----CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc--cCCceEEeecCcee
Confidence 44455555 4332 589999999999999999998643 478999997532111000 000 00123333333322
Q ss_pred CCCCCCcccEEEeccccCCCCCH-------HHHHHHHHHhcCCC-CEEEEEecc
Q 016981 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA-GTIIIVTWC 265 (379)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg-G~l~i~~~~ 265 (379)
..+..+.+|+|++..... ...+ ..+|.-+.++|+|| |.|++-.+.
T Consensus 141 ~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 141 FTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp TTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 234567899999865555 4332 24566778999999 999997654
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.11 E-value=1.1e-05 Score=71.90 Aligned_cols=115 Identities=17% Similarity=0.260 Sum_probs=76.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-cCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~~ 218 (379)
.+.++.+...+.+ +.+|||+||++|.|+.+++.+.+ ..|+|+|+...-.+.- ...+..++ +.+.|... |+.
T Consensus 82 KL~ei~~~~~l~~-----~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~ 154 (321)
T 3lkz_A 82 KLRWLVERRFLEP-----VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVF 154 (321)
T ss_dssp HHHHHHHTTSCCC-----CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTT
T ss_pred HHHHHHHhcCCCC-----CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHh
Confidence 5555555544443 78999999999999998888764 4699999976511000 00001122 24777776 876
Q ss_pred CCCCCCCcccEEEeccccCCCCCH-------HHHHHHHHHhcCCC-CEEEEEecc
Q 016981 219 QQPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA-GTIIIVTWC 265 (379)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg-G~l~i~~~~ 265 (379)
.++. .++|+|+|-.. +.-+++ .++|.-+.+.|++| |-+++-.++
T Consensus 155 ~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 155 YRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp SSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred hCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 6642 66999998766 665664 23566667899999 888886544
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.08 E-value=4.9e-06 Score=77.71 Aligned_cols=106 Identities=13% Similarity=0.100 Sum_probs=78.2
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-----CC--CCCeEEEEccCCCC----CCCCCc
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-----GL--ADKVSFQVGDALQQ----PFPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~--~~~i~~~~~d~~~~----~~~~~~ 226 (379)
++.+||=||.|.|..++.+.+....+|+.+|+++..++.+++.+... .. .++++++.+|+... .-..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 36899999999999999999865678999999999999999875321 01 13588899997543 112467
Q ss_pred ccEEEeccccCCC-CC---------HHHHHHHHHHhcCCCCEEEEEe
Q 016981 227 FDLVWSMESGEHM-PD---------KSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 227 fD~V~~~~~l~~~-~~---------~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
||+|+.-..-... .+ ..++++.+++.|+|||.++...
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9999975322111 11 1567889999999999988754
No 294
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.07 E-value=7.6e-05 Score=69.20 Aligned_cols=150 Identities=14% Similarity=0.040 Sum_probs=102.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--------------------CCCCeEEEEccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG--------------------LADKVSFQVGDA 217 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--------------------~~~~i~~~~~d~ 217 (379)
...|+.+|||.......+.... +..++-+|. |..++.-++.+...+ .+++..++.+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 6789999999999998888754 567888888 888887777776642 136788999999
Q ss_pred CCCC--------C-CCCcccEEEeccccCCCCCH--HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHH
Q 016981 218 LQQP--------F-PDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK 286 (379)
Q Consensus 218 ~~~~--------~-~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (379)
.+.. . ..+...++++-.++.+++.. .++++.+.+.+ |+|.+++.+...+.. ....+...+...+..
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~--~~~~fg~~m~~~l~~ 253 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQ--PNDRFGAIMQSNLKE 253 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCS--TTCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCC--CcchHHHHHHHHhhc
Confidence 8732 1 23567889999999999643 67888888877 788887777654421 112222222122222
Q ss_pred -Hhh-ccCCCCCCCHHHHHHHHHhCCCc
Q 016981 287 -ICD-AYYLPAWCSTADYVKLLQSLSLE 312 (379)
Q Consensus 287 -~~~-~~~~~~~~~~~~~~~~l~~aGF~ 312 (379)
... ......+.++++..+.|.++||+
T Consensus 254 ~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 254 SRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred ccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 111 11122356899999999999997
No 295
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.02 E-value=6.8e-07 Score=102.75 Aligned_cols=146 Identities=16% Similarity=0.104 Sum_probs=72.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCCCCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~------~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V 230 (379)
+..+|||||.|+|..+..+.+..+ .+++.+|+|+...+.|+++++.. ++.....|..+. ++..++||+|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeEE
Confidence 468999999999987766655542 37999999999888888887653 244333344332 3445789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 310 (379)
++..+++..++....+.+++++|||||++++.+....... .....+ +... .. ....+.+.++|.++|+++|
T Consensus 1316 ia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~---g~~~~~----~~~~-~r-~~~~~~~~~~w~~~l~~~g 1386 (2512)
T 2vz8_A 1316 VCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPL---GEMVGF----LTSP-EQ-GGRHLLSQDQWESLFAGAS 1386 (2512)
T ss_dssp EEECC--------------------CCEEEEEEC-----------------------------------CTTTTSSTTTT
T ss_pred EEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccc---cccccc----cccc-cc-cCCcccCHHHHHHHHHhCC
Confidence 9999998888889999999999999999998774321100 000000 0000 00 0012346778888999999
Q ss_pred CceeEE
Q 016981 311 LEDIKA 316 (379)
Q Consensus 311 F~~v~~ 316 (379)
|..+..
T Consensus 1387 f~~~~~ 1392 (2512)
T 2vz8_A 1387 LHLVAL 1392 (2512)
T ss_dssp EEEEEE
T ss_pred Cceeee
Confidence 988765
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.92 E-value=0.00017 Score=71.22 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=77.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC--
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--------------GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-- 222 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-- 222 (379)
+.+|+|-+||||.+...+.+.. ...++|+|+++.+...|+-++--.|.. ...+..+|....+.
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRIDPENSLRFPLRE 296 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEEECSCTTCSCGGG
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccccccccccCchhh
Confidence 7899999999999987766533 246999999999999999887777663 45667778665442
Q ss_pred --CCCcccEEEeccccCCCC---------------CH-HHHHHHHHHhcC-------CCCEEEEEec
Q 016981 223 --PDGQFDLVWSMESGEHMP---------------DK-SKFVSELARVTA-------PAGTIIIVTW 264 (379)
Q Consensus 223 --~~~~fD~V~~~~~l~~~~---------------~~-~~~l~~~~r~Lk-------pgG~l~i~~~ 264 (379)
....||+|+++=-+.--. +. ..++..+.+.|| |||++.++..
T Consensus 297 ~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 297 MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 235799999986553211 11 346777888886 7999988763
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.91 E-value=4.6e-05 Score=69.66 Aligned_cols=58 Identities=26% Similarity=0.239 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR 204 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 204 (379)
.+++.++.... . ++..|||++||+|.++..+++. |.+++|+|+++.+++.|++++...
T Consensus 223 ~l~~~~i~~~~-~-----~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-F-----VGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-C-----TTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45666666554 2 3889999999999999998876 789999999999999999998765
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.89 E-value=0.00014 Score=62.59 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=77.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-cC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DA 217 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~ 217 (379)
..+.++.+...+.+ +.+|||+||++|.|+.+++.+.+ .+|+|+|+-..-.+. -...+..|+ +.+.|..+ |+
T Consensus 65 ~KL~ei~ek~~l~~-----g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv 137 (267)
T 3p8z_A 65 AKLQWFVERNMVIP-----EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDV 137 (267)
T ss_dssp HHHHHHHHTTSSCC-----CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCG
T ss_pred HHHHHHHHhcCCCC-----CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccce
Confidence 35556666554444 88999999999999999888774 469999996542210 000112334 46899988 97
Q ss_pred CCCCCCCCcccEEEeccccCCCCCH-------HHHHHHHHHhcCCCCEEEEEecc
Q 016981 218 LQQPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
..++ ..++|.|+|-..= .-+++ .++|+-+.+.|++ |-+++-.++
T Consensus 138 ~~~~--~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 138 FYLP--PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp GGCC--CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred eecC--CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 6654 3669999986554 33443 2356666789999 777775544
No 299
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.81 E-value=3.6e-05 Score=67.40 Aligned_cols=98 Identities=20% Similarity=0.268 Sum_probs=61.5
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcC-CEEEEEeCCHH--HHHHHHHHHHHcCCCCCe---EEEEc-cCCCCCCCCCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPV--QAQRANALAAARGLADKV---SFQVG-DALQQPFPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~--~~~~a~~~~~~~~~~~~i---~~~~~-d~~~~~~~~~~fD~V 230 (379)
++.+|||+||+.|.|+..++++.+ ..|.|.++... .... ...+.++ .|..+ |+.+++ ...+|+|
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~-------~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvV 143 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPM-------LMQSYGWNIVTMKSGVDVFYKP--SEISDTL 143 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCC-------CCCSTTGGGEEEECSCCGGGSC--CCCCSEE
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCC-------cccCCCceEEEeeccCCccCCC--CCCCCEE
Confidence 599999999999999999998721 13334433322 1000 0000233 44446 988753 4679999
Q ss_pred EeccccCCCCCH----H---HHHHHHHHhcCCCC-EEEEEecc
Q 016981 231 WSMESGEHMPDK----S---KFVSELARVTAPAG-TIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~----~---~~l~~~~r~LkpgG-~l~i~~~~ 265 (379)
+|-..-. ..++ . .+|.-+.++|+||| .+++-.+.
T Consensus 144 LSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 144 LCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 9865543 4332 1 24666679999999 88886654
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.55 E-value=0.001 Score=60.86 Aligned_cols=150 Identities=13% Similarity=0.002 Sum_probs=96.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEEccCCCC--------CCCCCccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL--ADKVSFQVGDALQQ--------PFPDGQFD 228 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--------~~~~~~fD 228 (379)
...|+++|||-=..+..+...-+..|+-+| .|..++..++.+...+. +.+..++.+|+.+. .+.....-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSART 181 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCE
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCE
Confidence 457999999987765555421146899999 49999999998876432 35688888998761 02223456
Q ss_pred EEEeccccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHH-HHHhhcc--------CCCCCC
Q 016981 229 LVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELL-KKICDAY--------YLPAWC 297 (379)
Q Consensus 229 ~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~ 297 (379)
++++-.+++++++ ...+++.+...+.||+.+++....... +. .. ....... ....... ......
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~--~~--~~-~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 256 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG--DE--WR-EQMQLRFRRVSDALGFEQAVDVQELIYHD 256 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC--SH--HH-HHHHHHHHHHHC-----------CCTTCC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC--cc--hh-HHHHHHHHHHHHHcCCcCCCCccccccCC
Confidence 7888889999975 367899999988999988886643321 10 00 0111112 1111111 111122
Q ss_pred C-HHHHHHHHHhCCCcee
Q 016981 298 S-TADYVKLLQSLSLEDI 314 (379)
Q Consensus 298 ~-~~~~~~~l~~aGF~~v 314 (379)
+ .++..+.|.+.||+.+
T Consensus 257 ~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 257 ENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TTCCCHHHHHTTTTEEEE
T ss_pred CChHHHHHHHHHCcCccc
Confidence 5 7889999999999987
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.52 E-value=0.00011 Score=67.13 Aligned_cols=87 Identities=16% Similarity=0.141 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~ 218 (379)
++++.++.+.+.+ +..++|..||.|..+..++++. .++|+|+|.++.+++.|+ ++ ...++.++.+++.
T Consensus 45 Ll~Evl~~L~i~p-----ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 45 LLDEAVNGLNIRP-----DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFS 114 (347)
T ss_dssp TTHHHHHHTCCCT-----TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGG
T ss_pred cHHHHHHhhCCCC-----CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHH
Confidence 6788888887665 8999999999999999999886 469999999999999984 43 1368999999987
Q ss_pred CCC--CC----CCcccEEEeccccC
Q 016981 219 QQP--FP----DGQFDLVWSMESGE 237 (379)
Q Consensus 219 ~~~--~~----~~~fD~V~~~~~l~ 237 (379)
++. ++ .+++|.|+....+.
T Consensus 115 ~l~~~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 115 ALGEYVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp GHHHHHHHTTCTTCEEEEEEECSCC
T ss_pred HHHHHHHhcCCCCcccEEEECCccC
Confidence 752 11 13699998766554
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.35 E-value=0.00053 Score=61.23 Aligned_cols=59 Identities=20% Similarity=0.223 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 205 (379)
.+++.++.... . ++..|||..||+|..+....+. |.+++|+|+++..++.|+++++..+
T Consensus 200 ~l~~~~i~~~~-~-----~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-N-----PNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-C-----TTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 35666666543 2 4889999999999999988775 8899999999999999999987543
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.28 E-value=0.0017 Score=57.87 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=70.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEeCC------cccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCe
Q 016981 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGC------GIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKV 210 (379)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~vLDiGc------GtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i 210 (379)
.....++++.+......-+.+++|||+|+ -.|.+ .+.+.. ++.|+++|+.+-.. ...
T Consensus 90 v~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s------------da~- 154 (344)
T 3r24_A 90 VAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS------------DAD- 154 (344)
T ss_dssp HHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC------------SSS-
T ss_pred HHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc------------CCC-
Confidence 34566777766443333346899999996 44553 233333 35999999976321 112
Q ss_pred EEEEccCCCCCCCCCcccEEEecccc---CCC--CC-----H-HHHHHHHHHhcCCCCEEEEEecc
Q 016981 211 SFQVGDALQQPFPDGQFDLVWSMESG---EHM--PD-----K-SKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 211 ~~~~~d~~~~~~~~~~fD~V~~~~~l---~~~--~~-----~-~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.++++|...... .++||+|++-..- .+. .. . +.++.-+.++|+|||.|++-.+-
T Consensus 155 ~~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 155 STLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp EEEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred eEEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 458999765432 4789999974322 221 11 2 55666678899999999997653
No 304
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.26 E-value=0.0009 Score=60.68 Aligned_cols=126 Identities=15% Similarity=0.120 Sum_probs=78.5
Q ss_pred CCEEEEeCCcccHHHHHHHH----Hc-CC--EEEEEeCCH--------H-HHHHHHHHHHHcC-C-CC--CeEEEEccCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAK----KF-GA--KCQGITLSP--------V-QAQRANALAAARG-L-AD--KVSFQVGDAL 218 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~----~~-~~--~v~gvD~s~--------~-~~~~a~~~~~~~~-~-~~--~i~~~~~d~~ 218 (379)
.-+|||+|-|||........ .. .. +++.+|..+ . ..+..+....... . .. .+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 56899999999986543332 11 23 456676421 1 1112222222210 0 12 3467778876
Q ss_pred CC-C-CCCCcccEEEeccccCCCCCH----HHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC
Q 016981 219 QQ-P-FPDGQFDLVWSMESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY 292 (379)
Q Consensus 219 ~~-~-~~~~~fD~V~~~~~l~~~~~~----~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
+. + +.+..||+|+.- .+..-.+| ..+++.++++++|||.++- ++
T Consensus 177 ~~l~~l~~~~~Da~flD-gFsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt--------------------------- 226 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHD-AFSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS--------------------------- 226 (308)
T ss_dssp HHGGGCCSCCEEEEEEC-CSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC---------------------------
T ss_pred HHHhhhcccceeEEEeC-CCCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee---------------------------
Confidence 53 3 445579999864 34444454 7999999999999998753 22
Q ss_pred CCCCCCHHHHHHHHHhCCCceeEEEec
Q 016981 293 LPAWCSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 293 ~~~~~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
....+++.|+++||++.....+
T Consensus 227 -----aag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 227 -----SSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp -----CCHHHHHHHHHTTCEEEEEECC
T ss_pred -----CcHHHHHHHHHCCCEEEecCCC
Confidence 3456889999999998887654
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.20 E-value=0.0011 Score=61.66 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCCCC-CCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC
Q 016981 140 RMIEETLRFAGVSED-PTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~-~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 217 (379)
..++++++.+++... ...++..|||||.|.|.++..|++.. +.+|+++++++..+...++.. . .+++.++.+|+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~ 114 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCc
Confidence 366677777665421 00135899999999999999999865 569999999999999888776 2 25899999999
Q ss_pred CCC
Q 016981 218 LQQ 220 (379)
Q Consensus 218 ~~~ 220 (379)
.++
T Consensus 115 l~~ 117 (353)
T 1i4w_A 115 YDW 117 (353)
T ss_dssp TCH
T ss_pred cch
Confidence 654
No 306
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.84 E-value=0.073 Score=48.96 Aligned_cols=154 Identities=13% Similarity=0.020 Sum_probs=95.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC----------------------CCCCeEEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARG----------------------LADKVSFQV 214 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----------------------~~~~i~~~~ 214 (379)
...|+-+|||.=.....+.... +..++=||. |..++.=++.+...+ .+.+..++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5789999999988777776642 567888888 455554333333210 135788899
Q ss_pred ccCCCC----------CCCCCcccEEEeccccCCCCC--HHHHHHHHHHhcCCCCEEEEEeccCCCCCCCccccchHHHH
Q 016981 215 GDALQQ----------PFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQE 282 (379)
Q Consensus 215 ~d~~~~----------~~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 282 (379)
+|+.+. .+..+..-++++-.++.+++. ..++|+.+.+.. |+|.+++.+...++ ..+...+..
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~-----d~fg~~M~~ 243 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG-----DRFGQIMIE 243 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT-----SHHHHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC-----CHHHHHHHH
Confidence 998763 133455668888889999864 367888888776 55666666755321 122222212
Q ss_pred HHHHHhhc-cCCCCCCCHHHHHHHHHhCCCceeEEEec
Q 016981 283 LLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (379)
Q Consensus 283 ~~~~~~~~-~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 319 (379)
.+...... .....+.++++..+.|.++||+.+...+.
T Consensus 244 ~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 244 NLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 12111111 11113458899999999999999876543
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.74 E-value=0.0078 Score=57.04 Aligned_cols=97 Identities=18% Similarity=0.057 Sum_probs=66.7
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC---------CCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---------PDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------~~~~ 226 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .| ...+ |..+..+ ....
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG----a~~i--~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG----FETI--DLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT----CEEE--ETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC----CcEE--cCCCcchHHHHHHHHhCCCC
Confidence 389999999986 8888899987787 99999999998887764 23 2222 2222111 1236
Q ss_pred ccEEEeccccCCC--------CCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 227 FDLVWSMESGEHM--------PDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~--------~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+|+-.-.-... .++...+..+.++|+|||++++...
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 9999854332210 0123578899999999999987654
No 308
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.68 E-value=0.01 Score=56.12 Aligned_cols=99 Identities=21% Similarity=0.162 Sum_probs=68.3
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-C-----C-CCCCccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-----P-FPDGQFD 228 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-----~-~~~~~fD 228 (379)
++.+||-+|+|. |..+..+++..|+ .|+++|.++..++.+++ .|. ..+...-.+ + . .....+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhCCCCCC
Confidence 489999999875 8888999988787 79999999998888865 332 222211111 0 0 1123699
Q ss_pred EEEeccccC---------CCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 229 LVWSMESGE---------HMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 229 ~V~~~~~l~---------~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+-.-.-. |.+++...+..+.++|++||++++...
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 998654321 223455688999999999999988664
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.44 E-value=0.016 Score=54.17 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=65.8
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-----CCCCCcccEE
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~V 230 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |. . .++..+-.+. ....+.+|+|
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga--~-~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GA--T-HVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TC--S-EEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC--C-EEecCCccCHHHHHHHhcCCCCcEE
Confidence 489999999986 8888888887787 799999999998888653 32 1 1222111111 0112369999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+-.-. ....+..+.+.|+|||++++....
T Consensus 263 id~~g------~~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 263 LESTG------SPEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp EECSC------CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred EECCC------CHHHHHHHHHHHhcCCEEEEeCCC
Confidence 85422 146788999999999999887643
No 310
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.36 E-value=0.016 Score=53.72 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=64.7
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++ .|. .. ++ .+...+ . ..+|+|+-.-.-
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~-v~-~~~~~~--~-~~~D~vid~~g~ 244 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGV--KH-FY-TDPKQC--K-EELDFIISTIPT 244 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTC--SE-EE-SSGGGC--C-SCEEEEEECCCS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCC--Ce-ec-CCHHHH--h-cCCCEEEECCCc
Confidence 389999999875 888888898888999999999988887765 332 12 22 332222 2 279999854322
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
. ..+..+.+.|+|||++++...
T Consensus 245 ~------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 245 H------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp C------CCHHHHHTTEEEEEEEEECCC
T ss_pred H------HHHHHHHHHHhcCCEEEEECC
Confidence 2 247788899999999998764
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.14 E-value=0.022 Score=48.07 Aligned_cols=91 Identities=19% Similarity=0.206 Sum_probs=61.3
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||..|+ |.|..+..++...|++|+++|.++...+.+++ .|. .. . .|..+.. ...+.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~-~--~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV--EY-V--GDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC--SE-E--EETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC--CE-E--eeCCcHHHHHHHHHHhCCCCC
Confidence 4899999994 55666666666568899999999887766543 232 11 1 2332211 122469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+.+-. ...+..+.+.|+|||++++...
T Consensus 109 D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 109 DVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred eEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 99986532 2568889999999999988653
No 312
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.09 E-value=0.0029 Score=56.53 Aligned_cols=101 Identities=12% Similarity=0.004 Sum_probs=77.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CC---CCCCcccEEEecc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP---FPDGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~---~~~~~fD~V~~~~ 234 (379)
+..+||+=+|||.+++.+... +.+++.+|.++...+..+++++. ..++.++..|... +. -+..+||+|++-=
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 567999999999999999885 68999999999999999888754 2579999999644 21 2245799999765
Q ss_pred ccCCCCCHHHHHHHHHH--hcCCCCEEEEEe
Q 016981 235 SGEHMPDKSKFVSELAR--VTAPAGTIIIVT 263 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r--~LkpgG~l~i~~ 263 (379)
..+.-.+..+++..+.+ .+.|+|.+++--
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 44433455677766665 567999988854
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.96 E-value=0.012 Score=54.84 Aligned_cols=94 Identities=17% Similarity=0.138 Sum_probs=64.6
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcc---CCC----C-CCCCCcc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGD---ALQ----Q-PFPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~----~-~~~~~~f 227 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|.. .++..+ ..+ + ....+.+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHHhCCCC
Confidence 389999999885 8888889887787 99999999988887764 3321 122211 001 0 0001469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+-.-. . ...+....++|+|||++++...
T Consensus 244 D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 244 EVTIECTG-----A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEec
Confidence 99985321 1 4567888999999999988764
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.92 E-value=0.029 Score=51.73 Aligned_cols=92 Identities=20% Similarity=0.147 Sum_probs=65.7
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC------CCCcccEE
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF------PDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~fD~V 230 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++ .|. .. .+ |..+..+ ..+.+|+|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~~-~i--~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGA--EV-AV--NARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC--SE-EE--ETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCC--CE-EE--eCCCcCHHHHHHHhCCCCCEE
Confidence 489999999875 888999999889999999999998888765 332 11 12 2222111 11368888
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+-... ....++.+.+.|+|||++++...
T Consensus 237 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 75421 15678899999999999988754
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.91 E-value=0.08 Score=49.02 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=64.5
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC-CCCC------CC---CCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQQP------FP---DGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~------~~---~~~ 226 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++ .|. . ..+..+- .+.. .. .+.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGA--D-VTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC--S-EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCC--C-EEEcCcccccHHHHHHHHhccccCCC
Confidence 389999999875 778888888778899999999998888764 332 1 1221110 1110 11 246
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+|+-.-. . ...++.+.++|+|||++++...
T Consensus 241 ~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 241 PNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 999985422 1 4568888999999999988764
No 316
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.87 E-value=0.15 Score=44.93 Aligned_cols=105 Identities=10% Similarity=0.098 Sum_probs=70.8
Q ss_pred CCEEEEeCCcccHHHHHHHHH-------c-CCEEEEEe-----CCH----------------------HHHHHH---HHH
Q 016981 159 PKNVVDVGCGIGGSSRYLAKK-------F-GAKCQGIT-----LSP----------------------VQAQRA---NAL 200 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~-------~-~~~v~gvD-----~s~----------------------~~~~~a---~~~ 200 (379)
+..|+|+||-.|..+..++.. . ..+|+|+| +.+ +.+... .++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 679999999999988876642 1 36899999 321 111111 111
Q ss_pred HHHcCC-CCCeEEEEccCCCC-C-----CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 201 AAARGL-ADKVSFQVGDALQQ-P-----FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 201 ~~~~~~-~~~i~~~~~d~~~~-~-----~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.+..+. ++++.++.+++.+. | .+.++||+|+.-.-. .......+..+...|+|||.+++-++.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 122344 37899999998763 2 245679999876532 223356799999999999999987753
No 317
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.84 E-value=0.011 Score=55.37 Aligned_cols=93 Identities=23% Similarity=0.252 Sum_probs=63.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-C-CCCCCcccEEEecc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-PFPDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-~~~~~~fD~V~~~~ 234 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++ .|. + .++...-.+ . ... +.+|+|+-.-
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa-~--~vi~~~~~~~~~~~~-~g~Dvvid~~ 265 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGA-D--EVVNSRNADEMAAHL-KSFDFILNTV 265 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC-S--EEEETTCHHHHHTTT-TCEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC-c--EEeccccHHHHHHhh-cCCCEEEECC
Confidence 389999999885 788888888778899999999988888775 232 1 122111001 0 111 4699998543
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.-. ..++.+.+.|+|||++++...
T Consensus 266 g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 266 AAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCH------HHHHHHHHHhccCCEEEEecc
Confidence 321 236778899999999887654
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.84 E-value=0.015 Score=54.57 Aligned_cols=92 Identities=22% Similarity=0.246 Sum_probs=65.5
Q ss_pred CCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----------CCCCc
Q 016981 159 PKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDGQ 226 (379)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~~ 226 (379)
+.+||-+|+|. |..+..+++..|+ +|+++|.++...+.+++. |.. ..+ |..+.. ...+.
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi--~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATV--DPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEE--CTTSSCHHHHHHSTTSSSTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEE--CCCCcCHHHHHHhhhhccCCC
Confidence 89999999875 7788888888787 899999999988887763 321 111 221110 22347
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+|+|+-.-. ....+..+.++|++||++++....
T Consensus 254 ~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 254 VDVVIECAG------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp EEEEEECSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCEEEECCC------CHHHHHHHHHHhccCCEEEEEecc
Confidence 999985321 146788999999999999887643
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.81 E-value=0.16 Score=40.10 Aligned_cols=90 Identities=18% Similarity=0.124 Sum_probs=58.1
Q ss_pred CCEEEEeCCcccHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKK---FGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 231 (379)
..+|+=+|||. ++..+++. .|..|+++|.++..++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 56899999864 44444433 37899999999998887664 24677888876532 1224688887
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCCEEEEEe
Q 016981 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+. +++. ...+....+.+.|+..++...
T Consensus 77 ~~-----~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 77 LT-----IPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EC-----CSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EE-----CCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 53 2333 223445667788888766533
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.79 E-value=0.073 Score=49.48 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=67.1
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC--CC------CCCCCcc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDAL--QQ------PFPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~--~~------~~~~~~f 227 (379)
++.+||=+|+|. |..+..+++..|++ |+++|.++..++.+++. .. .-+.+...+.. ++ ......+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHHhCCCCC
Confidence 388999999875 78888999887886 99999999999988875 21 12333211110 10 0123569
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|+-.-. ....+..+.++|++||++++....
T Consensus 254 Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 254 AVALECTG------VESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp SEEEECSC------CHHHHHHHHHHSCTTCEEEECCCC
T ss_pred CEEEECCC------ChHHHHHHHHHhcCCCEEEEEccC
Confidence 99985321 145788899999999999987643
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.70 E-value=0.04 Score=51.06 Aligned_cols=93 Identities=16% Similarity=0.088 Sum_probs=65.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |. ..++ |..+.. .....+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GA---TDII--NYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TC---CEEE--CGGGSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CC---ceEE--cCCCcCHHHHHHHHcCCCCC
Confidence 389999999875 7788888887787 899999999888887763 32 1122 221111 123369
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|+-.-.- ...+..+.+.|+|||++++....
T Consensus 237 D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 237 DKVVIAGGD------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEEEECSSC------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred CEEEECCCC------hHHHHHHHHHHhcCCEEEEeccc
Confidence 999853221 24688889999999999887643
No 322
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.62 E-value=0.06 Score=50.17 Aligned_cols=94 Identities=21% Similarity=0.094 Sum_probs=65.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC------CCCCcccEE
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~fD~V 230 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++. |. . .++..+..+.. .....+|+|
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga--~-~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GA--D-HGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TC--S-EEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CC--C-EEEcCCcccHHHHHHHHhCCCCceEE
Confidence 489999999875 7788888888799999999999988887653 32 1 12221111110 123369999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+-.-. . ..+..+.+.|+|||++++....
T Consensus 262 id~~g-~------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 262 LEIAG-G------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEETT-S------SCHHHHHHHEEEEEEEEEECCC
T ss_pred EECCC-h------HHHHHHHHHhhcCCEEEEEecC
Confidence 86533 1 2467788999999999988654
No 323
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.51 E-value=0.064 Score=49.20 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=62.9
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CC-------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP-------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~-------~~~~~f 227 (379)
++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+++ .|. .. ..|..+ .. ...+.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~---~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGF--DA---AFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--SE---EEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--cE---EEecCCHHHHHHHHHHHhCCCC
Confidence 4899999998 56777777777668899999999988877733 232 11 123322 11 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+.+-. ...+..+.+.|+|||++++...
T Consensus 216 d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 216 DCYFDNVG-------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred eEEEECCC-------hHHHHHHHHHHhcCCEEEEEec
Confidence 99986543 2357888999999999988654
No 324
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.46 E-value=0.03 Score=57.08 Aligned_cols=125 Identities=22% Similarity=0.226 Sum_probs=79.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-------------CCEEEEEeC---CHHHHHHHH-----------HHHHHcCC-----
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-------------GAKCQGITL---SPVQAQRAN-----------ALAAARGL----- 206 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-------------~~~v~gvD~---s~~~~~~a~-----------~~~~~~~~----- 206 (379)
.-+|+|+|.|+|.....+.+.. ..+++.++. +...+..+- +.+.....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 5799999999999877665532 146899998 555555432 22222110
Q ss_pred -----C---CCeEEEEccCCCC-C-CC---CCcccEEEeccccCCC-CCH--HHHHHHHHHhcCCCCEEEEEeccCCCCC
Q 016981 207 -----A---DKVSFQVGDALQQ-P-FP---DGQFDLVWSMESGEHM-PDK--SKFVSELARVTAPAGTIIIVTWCHRDLA 270 (379)
Q Consensus 207 -----~---~~i~~~~~d~~~~-~-~~---~~~fD~V~~~~~l~~~-~~~--~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 270 (379)
. -.+++..+|+.+. + +. .+.+|.++.-..--.- ++. ..++..+.++++|||.+.-..
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 0 1356677787542 2 21 4689999875422211 221 789999999999999865422
Q ss_pred CCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEE
Q 016981 271 PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 317 (379)
....+++.|+++||.+....
T Consensus 212 ---------------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ---------------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ---------------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEecc
Confidence 23457888999999877655
No 325
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.32 E-value=0.058 Score=54.74 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=79.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-----------C--CEEEEEeC---CHHHHHHHHH-----------HHHHcCCC----
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-----------G--AKCQGITL---SPVQAQRANA-----------LAAARGLA---- 207 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-----------~--~~v~gvD~---s~~~~~~a~~-----------~~~~~~~~---- 207 (379)
.-+|||+|-|+|.......+.. . .++++++. +++.+..+-. .......+
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 5699999999999766655432 1 36899998 7777763322 22222110
Q ss_pred ---------CCeEEEEccCCCC-C-CC---CCcccEEEeccccCCCCCH----HHHHHHHHHhcCCCCEEEEEeccCCCC
Q 016981 208 ---------DKVSFQVGDALQQ-P-FP---DGQFDLVWSMESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDL 269 (379)
Q Consensus 208 ---------~~i~~~~~d~~~~-~-~~---~~~fD~V~~~~~l~~~~~~----~~~l~~~~r~LkpgG~l~i~~~~~~~~ 269 (379)
-.+++..+|+.+. + +. ...||+|+.-. +..-.++ ..+++.++++++|||.+.-..
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 1244556666442 2 11 36799998643 3222233 789999999999999875422
Q ss_pred CCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEE
Q 016981 270 APSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (379)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 317 (379)
....+++.|+++||.+....
T Consensus 220 ----------------------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 ----------------------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ----------------------------CCHHHHHHHHHHTCEEEEEE
T ss_pred ----------------------------CcHHHHHHHHhCCeEEEecc
Confidence 23457788999999876654
No 326
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.31 E-value=0.04 Score=51.66 Aligned_cols=68 Identities=18% Similarity=0.108 Sum_probs=53.6
Q ss_pred CEEEEeCCcccHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---C-----CCCcccEE
Q 016981 160 KNVVDVGCGIGGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---F-----PDGQFDLV 230 (379)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~-----~~~~fD~V 230 (379)
.+++|+-||.|.++..+... |.+ |.++|+++.+.+..+.++ ++..++.+|+.++. + ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999999887 554 669999999988887764 35678888988763 1 24679999
Q ss_pred Eecc
Q 016981 231 WSME 234 (379)
Q Consensus 231 ~~~~ 234 (379)
+..-
T Consensus 76 ~ggp 79 (376)
T 3g7u_A 76 IGGP 79 (376)
T ss_dssp EECC
T ss_pred EecC
Confidence 8643
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.28 E-value=0.028 Score=51.26 Aligned_cols=88 Identities=15% Similarity=0.216 Sum_probs=60.1
Q ss_pred CCCCEEEEeCCc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccc
Q 016981 157 KRPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 157 ~~~~~vLDiGcG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (379)
.++.+||=+|+| .|..+..+++..|++|++++ ++...+.+++. | ......|...+ .+.+|+|+-.-.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----G----a~~v~~d~~~v---~~g~Dvv~d~~g 208 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----G----VRHLYREPSQV---TQKYFAIFDAVN 208 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----T----EEEEESSGGGC---CSCEEEEECC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----C----CCEEEcCHHHh---CCCccEEEECCC
Confidence 358999999996 47888889988889999999 88888887652 2 22222242222 467999984322
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
- ..+..+.++|+|||++++..
T Consensus 209 ~-------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 S-------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------TTGGGEEEEEEEEEEC
T ss_pred c-------hhHHHHHHHhcCCCEEEEEe
Confidence 1 12356789999999998874
No 328
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.22 E-value=0.082 Score=48.54 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=64.3
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-------CCCCccc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQFD 228 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~fD 228 (379)
++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+.+. .|. . ..+ |..+.. ...+.+|
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~--~-~~~--~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGF--D-GAI--DYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCC--S-EEE--ETTTSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC--C-EEE--ECCCHHHHHHHHHhcCCCce
Confidence 3899999998 567788888887789999999999887776322 232 1 111 222211 1134699
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+|+.+-. ...+..+.+.|++||++++....
T Consensus 221 ~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 221 VFFDNVG-------GEILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp EEEESSC-------HHHHHHHHTTEEEEEEEEECCCG
T ss_pred EEEECCC-------cchHHHHHHHHhhCCEEEEEeec
Confidence 9986432 24788899999999999887643
No 329
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.16 E-value=0.072 Score=49.06 Aligned_cols=92 Identities=18% Similarity=0.162 Sum_probs=62.5
Q ss_pred CCCEEEEeCCc--ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGCG--IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcG--tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++. |. .. .+ |..+.. .....+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga--~~-~~--~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GA--AY-VI--DTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CC--cE-EE--eCCcccHHHHHHHHhCCCCC
Confidence 48999999987 57788888887799999999999888877762 32 11 12 222211 123469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|+..-. ...+.+..++|+|||++++....
T Consensus 215 Dvvid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 215 DAAIDSIG-------GPDGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp EEEEESSC-------HHHHHHHHHTEEEEEEEEECCCT
T ss_pred cEEEECCC-------ChhHHHHHHHhcCCCEEEEEeec
Confidence 99986432 12234455899999999987643
No 330
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.16 E-value=0.016 Score=53.75 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=54.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---CCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V~~~ 233 (379)
..+|||+-||.|.++..+.... ...|.++|+++.+++..+.++. +..+..+|+.++. ++...+|+|+..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 4689999999999999998873 1368999999999999888762 3457788888763 111258999875
Q ss_pred cc
Q 016981 234 ES 235 (379)
Q Consensus 234 ~~ 235 (379)
--
T Consensus 76 pP 77 (343)
T 1g55_A 76 PP 77 (343)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 331
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.15 E-value=0.099 Score=48.13 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=64.0
Q ss_pred CCCEEEEeCCc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC------CCcccEE
Q 016981 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP------DGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~fD~V 230 (379)
++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++ .|. . .+ .|..+..+. .+.+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~~--~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGA--D-LV--VNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTC--S-EE--ECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCC--C-EE--ecCCCccHHHHHHHHhCCCCEE
Confidence 38999999986 4777888888778999999999988887764 332 1 11 233221110 0468998
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+..-. . ...++.+.++|++||++++...
T Consensus 235 id~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 235 VVTAV-----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 75432 1 3568889999999999988654
No 332
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.00 E-value=0.072 Score=50.55 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=48.6
Q ss_pred CCCCEEEEeCCcccHHHHHHH-HHcC--CEEEEEeCCHHHHHHHHHHHHH--c-CCCCCeEEEEccC
Q 016981 157 KRPKNVVDVGCGIGGSSRYLA-KKFG--AKCQGITLSPVQAQRANALAAA--R-GLADKVSFQVGDA 217 (379)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~-~~~~--~~v~gvD~s~~~~~~a~~~~~~--~-~~~~~i~~~~~d~ 217 (379)
.++..|+|+|++.|..+..++ +..+ ++|+++|++|...+..+++++. + +.++++.++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 458999999999999999888 4443 6999999999999999999987 2 2225777765444
No 333
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.00 E-value=0.019 Score=53.20 Aligned_cols=92 Identities=18% Similarity=0.130 Sum_probs=64.6
Q ss_pred CCEEEEeCCcc-cHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc----cC-CCCCCCCCcccEE
Q 016981 159 PKNVVDVGCGI-GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVG----DA-LQQPFPDGQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~-~~~~~~~~~fD~V 230 (379)
+.+||-+|+|. |..+..+++.. |++|+++|.++..++.+++. |. + .++.. |. ..+. ....+|+|
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga-~--~vi~~~~~~~~~~~~~-~g~g~D~v 242 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GA-D--YVSEMKDAESLINKLT-DGLGASIA 242 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TC-S--EEECHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CC-C--EEeccccchHHHHHhh-cCCCccEE
Confidence 89999999874 77888999988 89999999999988887652 32 1 11111 10 0111 12369999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+-.-. . ...++.+.++|+|||++++...
T Consensus 243 id~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 243 IDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 85422 1 4578889999999999988654
No 334
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.98 E-value=0.21 Score=47.16 Aligned_cols=95 Identities=22% Similarity=0.148 Sum_probs=63.4
Q ss_pred CCCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCc
Q 016981 157 KRPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQ 226 (379)
Q Consensus 157 ~~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~ 226 (379)
.++.+||=+|+|. |..+..+++..|+ +|+++|.++..++.+++. |. -.++ |..+.. .....
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GA---DHVI--DPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TC---SEEE--CTTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CC---CEEE--cCCCCCHHHHHHHHhCCCC
Confidence 3589999999874 7788888887787 999999999988888753 32 1122 222111 12236
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhc----CCCCEEEEEecc
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVT----APAGTIIIVTWC 265 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~L----kpgG~l~i~~~~ 265 (379)
+|+|+-. .......+..+.+.| ++||++++....
T Consensus 283 ~D~vid~-----~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 283 AKLFLEA-----TGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CSEEEEC-----SSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCEEEEC-----CCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 9999743 233334555555566 999999987643
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.88 E-value=0.13 Score=48.03 Aligned_cols=92 Identities=17% Similarity=0.317 Sum_probs=64.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC--CC-------CCCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~-------~~~~~ 226 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|. + .++ |..+ .. ...+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa-~--~vi--~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGA-T--DFV--NPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC-C--EEE--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCC-c--eEE--eccccchhHHHHHHHHhCCC
Confidence 489999999874 7788888887787 89999999988887764 332 1 112 2221 01 11236
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-CEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 264 (379)
+|+|+-.-. . ...+..+.++|+|| |++++...
T Consensus 263 ~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 263 VDFSLECVG-----N-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 999985321 1 45688999999999 99988764
No 336
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.87 E-value=0.039 Score=50.61 Aligned_cols=58 Identities=14% Similarity=0.090 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 016981 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (379)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 205 (379)
+++.++.... .++..|||.-||+|..+....+. |.+.+|+|+++...+.+++++...+
T Consensus 241 l~~~~i~~~~------~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 241 LPEFFIRMLT------EPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHHHHC------CTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHHHhC------CCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 4555555432 24899999999999998887765 8899999999999999999876543
No 337
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.85 E-value=0.033 Score=52.11 Aligned_cols=92 Identities=15% Similarity=0.099 Sum_probs=64.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC----C-----CCCCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----Q-----PFPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~-----~~~~~~ 226 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|. . .++ |..+ . ....+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--~-~vi--~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGA--T-ECL--NPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTC--S-EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC--c-EEE--ecccccchHHHHHHHHhCCC
Confidence 489999999874 7788888887787 89999999988887764 332 1 122 2211 1 011247
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-CEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 264 (379)
+|+|+-.-. . ...+..+.++|++| |++++...
T Consensus 262 ~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 262 VDYAVECAG-----R-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 999985321 1 45688899999999 99988664
No 338
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.77 E-value=0.12 Score=47.66 Aligned_cols=92 Identities=23% Similarity=0.324 Sum_probs=64.1
Q ss_pred CCCEEEEeCCc--ccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-------CCC-Cc
Q 016981 158 RPKNVVDVGCG--IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPD-GQ 226 (379)
Q Consensus 158 ~~~~vLDiGcG--tG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------~~~-~~ 226 (379)
++.+||-.|+| .|..+..+++.. |++|+++|.++..++.+++. |. .. +. |..+.. ... +.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~--~~-~~--~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GA--DY-VI--NASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CC--CE-Ee--cCCCccHHHHHHHHhcCCC
Confidence 38999999987 566777888887 89999999999888877542 32 11 11 222111 112 47
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+|+..-. ....++.+.++|+|||++++...
T Consensus 241 ~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 241 VDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred ceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 999985432 14568888999999999988654
No 339
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.76 E-value=0.061 Score=49.23 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHcC
Q 016981 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSP---VQAQRANALAAARG 205 (379)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~ 205 (379)
.+++.++.... . ++..|||.-||+|..+....+. |.+.+|+|+++ ...+.+++++...+
T Consensus 230 ~l~~~~i~~~~-~-----~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALS-H-----PGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHS-C-----TTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhC-C-----CCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 35556665542 2 4899999999999999888876 88999999999 99999999886543
No 340
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.75 E-value=0.068 Score=49.40 Aligned_cols=92 Identities=22% Similarity=0.223 Sum_probs=63.3
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CC-------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP-------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~-------~~~~~f 227 (379)
++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .|. .. . .|..+ .. ...+.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~--~~-~--~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGG--EV-F--IDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTC--CE-E--EETTTCSCHHHHHHHHHTSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCC--ce-E--EecCccHhHHHHHHHHhCCCC
Confidence 4899999998 56777777777668899999998887776654 232 11 1 23321 11 011268
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+..-. ....++.+.+.|++||++++...
T Consensus 240 D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 240 HGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred CEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 99986532 14578899999999999988654
No 341
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.74 E-value=0.14 Score=47.20 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=63.8
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C-------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-------~~~~~f 227 (379)
++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+++. .|. .. .. |..+. . ...+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~--~~-~~--d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGF--DD-AF--NYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCC--SE-EE--ETTSCSCSHHHHHHHCTTCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC--ce-EE--ecCCHHHHHHHHHHHhCCCC
Confidence 4899999997 567788888887788999999999888776532 232 11 11 32221 1 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+.+-. ...+..+.+.|++||++++...
T Consensus 227 d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 227 DIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred cEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 99986532 2478889999999999988754
No 342
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.72 E-value=0.2 Score=46.16 Aligned_cols=92 Identities=21% Similarity=0.191 Sum_probs=64.6
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .|. . .. .|..+.. .....+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga--~-~~--~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGA--D-ET--VNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC--S-EE--EETTSTTHHHHHHHHTTTTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--C-EE--EcCCcccHHHHHHHHhCCCCc
Confidence 4899999998 57788888888778899999999998888764 232 1 11 2322211 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|+..-. . ..+..+.+.|+++|++++....
T Consensus 237 d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 237 DKVVDHTG-A------LYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp EEEEESSC-S------SSHHHHHHHEEEEEEEEESSCC
T ss_pred eEEEECCC-H------HHHHHHHHhhccCCEEEEEecC
Confidence 99986544 2 2477788999999998886543
No 343
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.71 E-value=0.19 Score=45.80 Aligned_cols=94 Identities=20% Similarity=0.125 Sum_probs=64.7
Q ss_pred CCCEEEEeC--CcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC------CCCCCcccE
Q 016981 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~------~~~~~~fD~ 229 (379)
++.+||-+| .|.|..+..+++..|++|+++|.++..++.+++. |. . ..+..+-.+. ......+|+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga--~-~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GA--W-ETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC--S-EEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC--C-EEEeCCCccHHHHHHHHhCCCCceE
Confidence 489999998 3468888888887799999999999988887752 32 1 1221111111 012346999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+..-.- ..+..+.+.|+|||++++....
T Consensus 213 vid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 213 VYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp EEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred EEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 9864331 3577888999999999987654
No 344
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.70 E-value=0.099 Score=47.96 Aligned_cols=94 Identities=12% Similarity=0.031 Sum_probs=64.3
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC------CCCCcccE
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~fD~ 229 (379)
++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .|. . ..+..+-.+.. .....+|+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~-~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGA--E-YLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--c-EEEeCCCchHHHHHHHHhCCCCceE
Confidence 4899999994 46778888888778999999999988887765 232 1 12221111110 12346999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+..-.- ..+..+.+.|+|||++++....
T Consensus 221 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 221 SFDSVGK-------DTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp EEECCGG-------GGHHHHHHHEEEEEEEEECCCT
T ss_pred EEECCCh-------HHHHHHHHHhccCCEEEEEcCC
Confidence 9865331 3577888999999999887643
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.69 E-value=0.041 Score=51.49 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=63.9
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC----C-----CCCCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----Q-----PFPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~-----~~~~~~ 226 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|. . .++ |..+ . ....+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--~-~vi--~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGA--T-ECV--NPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--S-EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--c-eEe--cccccchhHHHHHHHHhCCC
Confidence 489999999875 7788888887787 89999999988887764 332 1 112 2221 1 011246
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-CEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 264 (379)
+|+|+-.-. . ...+..+.+.|++| |++++...
T Consensus 262 ~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 262 VDFSFEVIG-----R-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred CcEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEecc
Confidence 999975321 1 45688899999999 99988664
No 346
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.69 E-value=0.16 Score=47.31 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=64.1
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC----C-----CCCCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----Q-----PFPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~-----~~~~~~ 226 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |. + .++ |..+ . ....+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga-~--~vi--~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GA-T--ECI--NPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TC-S--EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CC-c--eEe--ccccccccHHHHHHHHhCCC
Confidence 489999999874 7788888887787 899999999888887652 32 1 112 2211 1 011246
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-CEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 264 (379)
+|+|+-.-. . ...+..+.+.|+|| |++++...
T Consensus 261 ~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 261 VDYSFECIG-----N-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCC-----c-HHHHHHHHHhhccCCcEEEEEec
Confidence 999985421 1 45688899999999 99988764
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.59 E-value=0.018 Score=53.64 Aligned_cols=95 Identities=20% Similarity=0.197 Sum_probs=62.3
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC-CC--CCCCCcccEEEec
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL-QQ--PFPDGQFDLVWSM 233 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~-~~--~~~~~~fD~V~~~ 233 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++ .|. . .++..+-. +. ... +.+|+|+-.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~v~~~~~~~~~~~~~~-~~~D~vid~ 250 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGA--D-HYIATLEEGDWGEKYF-DTFDLIVVC 250 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC--S-EEEEGGGTSCHHHHSC-SCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCC--C-EEEcCcCchHHHHHhh-cCCCEEEEC
Confidence 389999999864 778888888778899999999888887765 232 1 12221111 11 111 469999865
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
-.-.. ...++.+.++|+|||++++...
T Consensus 251 ~g~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 251 ASSLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CSCST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 43200 1225566789999999988654
No 348
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.52 E-value=0.096 Score=47.34 Aligned_cols=97 Identities=20% Similarity=0.285 Sum_probs=57.8
Q ss_pred CCeEEEEccCCCC--CCCCCcccEEEeccccCCCCC--------------------HHHHHHHHHHhcCCCCEEEEEecc
Q 016981 208 DKVSFQVGDALQQ--PFPDGQFDLVWSMESGEHMPD--------------------KSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 208 ~~i~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~~~--------------------~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.++.++++|..+. .+++++||+|+++=-.....+ ...+++++.++|||||.+++..-.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 3578999998773 356789999998644322111 135778999999999999886421
Q ss_pred CCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCceeEEEecCC
Q 016981 266 HRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (379)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 321 (379)
... . ... . ......+ -...+..+++++||.......|..
T Consensus 100 ~~~--~----~~~-----~---g~~~~~~---~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 100 VAV--A----RRR-----F---GRHLVFP---LHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp EEE--E----CC------------EEEEC---HHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred Ccc--c----ccc-----C---Ccccccc---cHHHHHHHHHHcCCeeeccEEEeC
Confidence 000 0 000 0 0000000 134577889999998877666654
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.51 E-value=0.13 Score=47.46 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=63.9
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. |. -.++ |..+.. .....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga---~~~~--~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GA---DYVI--NPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TC---SEEE--CTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CC---CEEE--CCCCcCHHHHHHHHcCCCCC
Confidence 488999999863 7778888887788 899999999888877642 32 1111 222111 112369
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+..-. ....++.+.+.|++||++++...
T Consensus 238 D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 238 DVFLEFSG------APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC------CHHHHHHHHHHHhcCCEEEEEcc
Confidence 99985432 14568889999999999888764
No 350
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.50 E-value=0.033 Score=52.22 Aligned_cols=93 Identities=24% Similarity=0.313 Sum_probs=64.9
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCC--CCC-------CCCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL--QQP-------FPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~--~~~-------~~~~~ 226 (379)
++.+||=+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|.. .++ |.. +.. ..++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFV--NPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEE--ccccCchhHHHHHHHhcCCC
Confidence 488999999874 7888888887787 89999999988887764 3321 112 222 111 12347
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-CEEEEEecc
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTWC 265 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~~ 265 (379)
+|+|+-.-. . ...+..+.+.|++| |++++....
T Consensus 264 ~D~vid~~g-----~-~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 264 VDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp BSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHhhccCCEEEEEccc
Confidence 999985321 1 46788999999997 999887653
No 351
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.50 E-value=0.04 Score=51.58 Aligned_cols=92 Identities=18% Similarity=0.208 Sum_probs=63.9
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC--CC-------CCCCc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QP-------FPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~-------~~~~~ 226 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|. . .++ |..+ .. ...+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--~-~vi--~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGA--T-DCL--NPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--S-EEE--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--c-EEE--ccccccchHHHHHHHHhCCC
Confidence 489999999874 7788888888787 89999999988887764 332 1 111 2221 00 11236
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-CEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~i~~~ 264 (379)
+|+|+-.-. . ...+..+.+.|++| |++++...
T Consensus 266 ~Dvvid~~G-----~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 266 VDYSLDCAG-----T-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp BSEEEESSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ccEEEECCC-----C-HHHHHHHHHHhhcCCCEEEEECC
Confidence 999974321 1 45788999999999 99988664
No 352
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.46 E-value=0.11 Score=48.00 Aligned_cols=92 Identities=20% Similarity=0.268 Sum_probs=63.0
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC------CCCCcccE
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~fD~ 229 (379)
++.+||-+|+ |.|..+..+++..|++|++++.++..++.+++. |. . .+...+ .+.. .....+|+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga--~-~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GA--D-IVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TC--S-EEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC--c-EEecCc-hhHHHHHHHHhCCCCceE
Confidence 4899999997 568888888888899999999999888877763 32 1 122222 2110 12236999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+-.-.- ..+..+.+.|++||++++...
T Consensus 231 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 231 VVDPIGG-------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred EEECCch-------hHHHHHHHhhcCCCEEEEEEc
Confidence 9865332 247788899999999998764
No 353
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.46 E-value=0.061 Score=50.08 Aligned_cols=93 Identities=16% Similarity=0.111 Sum_probs=64.3
Q ss_pred CCCEEEEeC--CcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-----CCCCCcccEE
Q 016981 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~V 230 (379)
++.+||-+| .|.|..+..+++..|++|++++.++..++.+++ .|. . .++..+-.+. ....+.+|+|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga--~-~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGC--D-RPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCC--c-EEEecCChhHHHHHHHhcCCCCCEE
Confidence 389999999 456888888888778899999999988887765 332 1 1222111111 0112469999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+..-. . ..++.+.+.|++||++++...
T Consensus 236 id~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 236 YESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 86532 1 578889999999999888764
No 354
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.41 E-value=0.093 Score=48.69 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=61.2
Q ss_pred CEEEEeCCc-ccHHH-HHHH-HHcCCE-EEEEeCCHH---HHHHHHHHHHHcCCCCCeEEEEccCCCCCCC-----CCcc
Q 016981 160 KNVVDVGCG-IGGSS-RYLA-KKFGAK-CQGITLSPV---QAQRANALAAARGLADKVSFQVGDALQQPFP-----DGQF 227 (379)
Q Consensus 160 ~~vLDiGcG-tG~~~-~~l~-~~~~~~-v~gvD~s~~---~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~f 227 (379)
.+||-+|+| .|..+ ..++ +..|++ |+++|.++. .++.+++ .| .... |..+..+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lG----a~~v--~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LD----ATYV--DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TT----CEEE--ETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cC----Cccc--CCCccCHHHHHHhCCCC
Confidence 899999975 37778 8888 766876 999999887 7777654 23 2222 33321111 2368
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+-.-. . ...+..+.++|+|||++++...
T Consensus 244 Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIYEATG-----F-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----C-hHHHHHHHHHHhcCCEEEEEeC
Confidence 99874321 1 3568889999999999988764
No 355
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.38 E-value=0.098 Score=48.23 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=65.7
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC------CCCCcccE
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~fD~ 229 (379)
++.+||-+|+|. |..+..+++.. +.+|+++|.++..++.+++ .|.. .++..+- +.. .....+|+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~-~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVKSGA-GAADAIRELTGGQGATA 242 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEECST-THHHHHHHHHGGGCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCC-cHHHHHHHHhCCCCCeE
Confidence 489999999875 88888899877 7899999999998888765 3321 1221111 110 11236899
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+-.-. . ...+..+.+.|+|||++++....
T Consensus 243 v~d~~G-----~-~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 243 VFDFVG-----A-QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp EEESSC-----C-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEECCC-----C-HHHHHHHHHHHhcCCEEEEECCC
Confidence 885321 1 45788999999999999987644
No 356
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.38 E-value=0.92 Score=46.03 Aligned_cols=174 Identities=12% Similarity=0.049 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHHHHcC--
Q 016981 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF---------GAKCQGITLSPVQAQRANALAAARG-- 205 (379)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~-- 205 (379)
+....+.++++... . .+...|+-+|||.=.....+.... +..++=+|.. ..++.=++.++...
T Consensus 91 ~~d~~v~~fl~~~~-~----~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p-~v~~~K~~~l~~~~~l 164 (695)
T 2zwa_A 91 AIRSRLNSIIEQTP-Q----DKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYS-DLLKIKIELIKTIPEL 164 (695)
T ss_dssp HHHHHHHHHHHHSC-T----TSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECH-HHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHhccc-C----CCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccH-HHHHHHHHHHHcChHH
Confidence 44455555555430 1 125789999999988887776541 3456667773 44443333343211
Q ss_pred ------------CC---------CCeEEEEccCCCCC----------C-CCCcccEEEeccccCCCCC--HHHHHHHHHH
Q 016981 206 ------------LA---------DKVSFQVGDALQQP----------F-PDGQFDLVWSMESGEHMPD--KSKFVSELAR 251 (379)
Q Consensus 206 ------------~~---------~~i~~~~~d~~~~~----------~-~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r 251 (379)
.+ ++..++.+|+.+.. + .....-++++-.++.+++. ..++|+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~ 244 (695)
T 2zwa_A 165 SKIIGLSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK 244 (695)
T ss_dssp HHHTTCCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT
T ss_pred HHhhccccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh
Confidence 00 36788889987731 2 3344567777888899864 3678888875
Q ss_pred hcCCCCEEEEEeccCCCCCCCccccchHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHhCCCceeEEEecC
Q 016981 252 VTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY-YLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (379)
Q Consensus 252 ~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 320 (379)
+ |+|.+++.+...+.. ....+...+...+......+ ....+.+.++..+.|.++||+.+...++.
T Consensus 245 -~-~~~~~~~~e~~~~~~--~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~ 310 (695)
T 2zwa_A 245 -M-ENSHFIILEQLIPKG--PFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMF 310 (695)
T ss_dssp -S-SSEEEEEEEECCTTC--TTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHH
T ss_pred -C-CCceEEEEEeecCCC--CCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHH
Confidence 4 677777777543321 11222222222222211111 11235589999999999999987776543
No 357
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.29 E-value=0.22 Score=46.27 Aligned_cols=91 Identities=19% Similarity=0.301 Sum_probs=63.9
Q ss_pred CCCEEEEeC-Cc-ccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-C-----CCCCCccc
Q 016981 158 RPKNVVDVG-CG-IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-----PFPDGQFD 228 (379)
Q Consensus 158 ~~~~vLDiG-cG-tG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-----~~~~~~fD 228 (379)
++.+||=+| +| .|..+..+++.. +++|+++|.++..++.+++ .|. . .++ |..+ . ....+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGa--d-~vi--~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGA--H-HVI--DHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTC--S-EEE--CTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCC--C-EEE--eCCCCHHHHHHHhcCCCce
Confidence 478999998 44 588999999874 8899999999988888765 332 1 111 2211 0 12235799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+|+-.- .....+..+.++|+|||++++..
T Consensus 242 vvid~~------g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 242 FVFSTT------HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EEEECS------CHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEEECC------CchhhHHHHHHHhcCCCEEEEEC
Confidence 987532 12457889999999999998863
No 358
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.19 E-value=0.35 Score=45.25 Aligned_cols=44 Identities=18% Similarity=0.314 Sum_probs=35.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHHH
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF--------GAKCQGITLSPVQAQRANALAA 202 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--------~~~v~gvD~s~~~~~~a~~~~~ 202 (379)
+.+|+|+|.|+|.++..+.+.. ..+++.||+|+...+.-++++.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 5689999999999988887542 2489999999988876666554
No 359
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.09 E-value=0.12 Score=47.45 Aligned_cols=67 Identities=13% Similarity=0.006 Sum_probs=50.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-CCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~ 233 (379)
+.+++|+.||.|.++..+.......|.++|+++.+++..+.++.. .. .+|+.++.. .-..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~------~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE------KP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC------CC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC------CC--cCCHHHcCHhhCCCCCEEEEC
Confidence 579999999999999998876333577899999999998888732 11 577776531 11358999865
No 360
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.01 E-value=0.53 Score=36.86 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=54.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 231 (379)
..+|+=+||| .++..+++.+ |.+|+++|.++..++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4679999985 4555555443 7899999999988776654 24677888876631 1234688887
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCCEEEE
Q 016981 232 SMESGEHMPDK--SKFVSELARVTAPAGTIII 261 (379)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i 261 (379)
.... +. ...+....+.+. ...++.
T Consensus 76 ~~~~-----~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 76 ITGS-----DDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp ECCS-----CHHHHHHHHHHHHHHC-CCCEEE
T ss_pred EecC-----CHHHHHHHHHHHHHhC-CceEEE
Confidence 6432 32 233444455555 555544
No 361
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.01 E-value=0.071 Score=48.66 Aligned_cols=91 Identities=14% Similarity=0.202 Sum_probs=62.8
Q ss_pred EEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCCCCcccEEEeccccC
Q 016981 161 NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMESGE 237 (379)
Q Consensus 161 ~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~~~~l~ 237 (379)
+||=+|+ |.|..+..+++..|++|++++.++...+.+++. |. ..-+-..+.... ....+.+|+|+-.-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga--~~vi~~~~~~~~~~~~~~~~d~v~d~~--- 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GA--NRILSRDEFAESRPLEKQLWAGAIDTV--- 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TC--SEEEEGGGSSCCCSSCCCCEEEEEESS---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC--CEEEecCCHHHHHhhcCCCccEEEECC---
Confidence 4999986 568899999998899999999999888888762 32 111111111111 12345799887432
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
. ...+..+.+.|+|+|++++...
T Consensus 220 --g--~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 --G--DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --C--HHHHHHHHHTEEEEEEEEECCC
T ss_pred --C--cHHHHHHHHHHhcCCEEEEEec
Confidence 2 2378999999999999988764
No 362
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.00 E-value=0.2 Score=46.33 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=62.4
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+++ .|. . .. .|..+.. .....+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~-~~--~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGA--H-EV--FNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EE--EETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCC--C-EE--EeCCCchHHHHHHHHcCCCCc
Confidence 4899999996 56777777887778999999999988776654 232 1 11 2322211 112369
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+|+.+-. ...+....++|+|||++++..
T Consensus 241 D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 99986533 235778899999999998866
No 363
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.94 E-value=0.19 Score=45.82 Aligned_cols=91 Identities=15% Similarity=0.073 Sum_probs=62.9
Q ss_pred CCCEEEEeC--CcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-.| +|.|..+..+++..|++|+++|.++..++.+++. +. .. .. |..+.. .....+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~--~~-~~--~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GA--WQ-VI--NYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC--CE-EE--ECCCccHHHHHHHHhCCCCc
Confidence 489999999 4567777777776688999999999888877652 32 11 11 322211 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+.+-. ...++.+.+.|++||++++...
T Consensus 211 D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 211 RVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 99986543 2457888999999999988764
No 364
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.85 E-value=0.17 Score=47.28 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=64.0
Q ss_pred CCCEEEEeCCc-ccHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcc---CCC----C-C-CCCCc
Q 016981 158 RPKNVVDVGCG-IGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGD---ALQ----Q-P-FPDGQ 226 (379)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~----~-~-~~~~~ 226 (379)
++.+||-+|+| .|..+..+++..| .+|+++|.++..++.+++ .|. . .++..+ -.+ + . .....
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa--~-~vi~~~~~~~~~~~~~v~~~~~g~g 267 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGA--D-LTLNRRETSVEERRKAIMDITHGRG 267 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTC--S-EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCC--c-EEEeccccCcchHHHHHHHHhCCCC
Confidence 48999999976 4778888888778 599999999988888764 332 1 122211 001 0 0 11236
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+|+|+-.-.- ...+..+.++|+|||++++....
T Consensus 268 ~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 268 ADFILEATGD------SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp EEEEEECSSC------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred CcEEEECCCC------HHHHHHHHHHHhcCCEEEEEecC
Confidence 9999854321 23578889999999999887643
No 365
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.79 E-value=0.31 Score=45.00 Aligned_cols=91 Identities=12% Similarity=0.110 Sum_probs=62.4
Q ss_pred C--CEEEEeCC--cccHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-------CCCCc
Q 016981 159 P--KNVVDVGC--GIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQ 226 (379)
Q Consensus 159 ~--~~vLDiGc--GtG~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~ 226 (379)
+ .+||-.|+ |.|..+..+++..|+ +|+++|.++..++.+++. .|. .. . .|..+.. ...+.
T Consensus 159 g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~--~~-~--~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 159 GSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF--DA-A--INYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp TSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC--SE-E--EETTTSCHHHHHHHHCTTC
T ss_pred CCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC--ce-E--EecCchHHHHHHHHhcCCC
Confidence 7 89999997 456777777776688 999999998777766542 232 11 1 2322211 11226
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+|+.+-. ...+..+.++|++||++++...
T Consensus 231 ~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 231 VDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 899986543 2678889999999999988764
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.71 E-value=0.22 Score=46.03 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=63.9
Q ss_pred CCCEEEEeC--CcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-------CCCCccc
Q 016981 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQFD 228 (379)
Q Consensus 158 ~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~fD 228 (379)
++.+||-+| .|.|..+..+++..|++|+++|.++..++.+++. |. . ..+ |..+.. ...+.+|
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga--~-~~~--~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GA--K-RGI--NYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TC--S-EEE--ETTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC--C-EEE--eCCchHHHHHHHHHhCCCce
Confidence 489999995 3467888888887799999999999988887752 32 1 122 222211 0134699
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
+|+..-.- ..+..+.+.|++||++++....
T Consensus 238 vvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 238 IILDMIGA-------AYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp EEEESCCG-------GGHHHHHHTEEEEEEEEECCCT
T ss_pred EEEECCCH-------HHHHHHHHHhccCCEEEEEEec
Confidence 99865332 2577888999999999887643
No 367
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.70 E-value=0.23 Score=46.14 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=60.0
Q ss_pred CCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHcCCCCCeEEEEccCCCCCCC------CCccc
Q 016981 159 PKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSP---VQAQRANALAAARGLADKVSFQVGDALQQPFP------DGQFD 228 (379)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~fD 228 (379)
+.+||-+|+|. |..+..+++..|++|+++|.++ ..++.+++ .| .... | .+ .+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~----~g----a~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE----TK----TNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH----HT----CEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH----hC----Ccee--c-hH-HHHHHHHHhCCCCC
Confidence 78999999853 6667777776688999999987 66666654 23 2222 3 22 111 14699
Q ss_pred EEEeccccCCCCCHHHHH-HHHHHhcCCCCEEEEEec
Q 016981 229 LVWSMESGEHMPDKSKFV-SELARVTAPAGTIIIVTW 264 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l-~~~~r~LkpgG~l~i~~~ 264 (379)
+|+..-... ..+ +.+.+.|++||++++...
T Consensus 249 ~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 249 VIIDATGAD------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEECCCCC------THHHHHHGGGEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHHHhcCCEEEEEec
Confidence 998653321 245 888999999999988754
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.65 E-value=0.27 Score=45.42 Aligned_cols=91 Identities=16% Similarity=0.100 Sum_probs=62.3
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+++. |. .. . .|..+.. .....+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~--~~-~--~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GA--AA-G--FNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TC--SE-E--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC--cE-E--EecCChHHHHHHHHHhcCCCc
Confidence 4899999984 567777777777789999999999888877442 32 11 1 1222211 122469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+|+.+-.- ..+..+.++|++||++++...
T Consensus 233 d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 233 NLILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred eEEEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 999865432 247778899999999988764
No 369
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.59 E-value=0.01 Score=54.90 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=62.3
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-------CCCccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-------PDGQFD 228 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-------~~~~fD 228 (379)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++. . . .+ .|..+..+ ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v--~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RL--VNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EE--ECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hc--cCcCccCHHHHHHHhcCCCCC
Confidence 488999999853 7778888887788 899999999887766542 1 1 11 22221110 124689
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+-.-. . ...++.+.+.|++||++++...
T Consensus 234 ~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 234 VLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 9985422 1 4568889999999999888654
No 370
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.52 E-value=0.11 Score=48.20 Aligned_cols=95 Identities=17% Similarity=0.134 Sum_probs=60.2
Q ss_pred CCCEEEEeCCc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-CCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~V~~~~~ 235 (379)
++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++. .|. +.+ +-..+.... .. .+.+|+|+-.-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa-~~v-i~~~~~~~~~~~-~~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGA-DDY-VIGSDQAKMSEL-ADSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCC-SCE-EETTCHHHHHHS-TTTEEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCC-cee-eccccHHHHHHh-cCCCCEEEECCC
Confidence 38999999976 36777888887789999999998777666522 232 111 111110001 11 136999985432
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
-. ..+....++|+|||++++...
T Consensus 254 ~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 254 VH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp SC------CCSHHHHTTEEEEEEEEECSC
T ss_pred Ch------HHHHHHHHHhccCCEEEEeCC
Confidence 21 125667789999999988764
No 371
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.17 E-value=0.16 Score=47.33 Aligned_cols=92 Identities=27% Similarity=0.268 Sum_probs=60.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC---C-CCCCCcccEEEe
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ---Q-PFPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~---~-~~~~~~fD~V~~ 232 (379)
++.+||-+|+|. |..+..+++..|++|+++|.++..++.+++. .|. . .++ |..+ + .. .+.+|+|+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa--~-~v~--~~~~~~~~~~~-~~~~D~vid 257 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGA--D-SFL--VSRDQEQMQAA-AGTLDGIID 257 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCC--S-EEE--ETTCHHHHHHT-TTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCC--c-eEE--eccCHHHHHHh-hCCCCEEEE
Confidence 388999999763 6777788887789999999998777665532 232 1 111 2211 1 01 146999986
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.-.... .++.+.+.|++||+++....
T Consensus 258 ~~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 258 TVSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CCSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 533221 24566788999999887654
No 372
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.17 E-value=0.52 Score=45.20 Aligned_cols=92 Identities=24% Similarity=0.258 Sum_probs=64.5
Q ss_pred CCCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-------------
Q 016981 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------------- 221 (379)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------------- 221 (379)
.++.+||=+|+ |.|..+..+++..|++|++++.++..++.+++. |.. .++ |..+..
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~vi--~~~~~d~~~~~~~~~~~~~ 297 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE---AII--DRNAEGYRFWKDENTQDPK 297 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC---EEE--ETTTTTCCSEEETTEECHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc---EEE--ecCcCcccccccccccchH
Confidence 35899999997 468888899988899999999999888887652 321 111 111111
Q ss_pred ------------CCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 222 ------------FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 222 ------------~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.....+|+|+-.-. ...+..+.++|++||++++...
T Consensus 298 ~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 298 EWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEec
Confidence 11247999875322 2578888999999999988654
No 373
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.16 E-value=0.42 Score=43.95 Aligned_cols=91 Identities=14% Similarity=0.267 Sum_probs=62.7
Q ss_pred CCCEEEEeC-Cc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-C-----CCCCCcccE
Q 016981 158 RPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-----PFPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiG-cG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-----~~~~~~fD~ 229 (379)
++.+||=+| +| .|..+..+++..|++|+++|.++..++.+++. |. + .++ |..+ . ....+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga-~--~vi--~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GA-D--IVL--NHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TC-S--EEE--CTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC-c--EEE--ECCccHHHHHHHhCCCCccE
Confidence 488999994 44 57888888887789999999999988887762 32 1 111 2111 0 012346999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+-.- .....+..+.++|+|||+++...
T Consensus 221 v~d~~------g~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTF------NTDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESS------CHHHHHHHHHHHEEEEEEEEESS
T ss_pred EEECC------CchHHHHHHHHHhccCCEEEEEC
Confidence 98532 22566788999999999987643
No 374
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.10 E-value=0.12 Score=47.16 Aligned_cols=93 Identities=13% Similarity=0.182 Sum_probs=60.8
Q ss_pred CC-EEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC-CC-C-CCCCCcccEEEe
Q 016981 159 PK-NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQ-Q-PFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~-~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~-~-~~~~~~fD~V~~ 232 (379)
+. +||-+|+ |.|..+..+++..|++|++++.++..++.+++ .|.. .+ +-..+. .+ . ....+.+|+|+-
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~-~~-i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK-EV-LAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS-EE-EECC---------CCSCCEEEEEE
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc-EE-EecCCcHHHHHHHhcCCcccEEEE
Confidence 54 8999997 56888888988888899999999877777754 3321 11 111111 01 1 122346999875
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.-. . ..+..+.+.|++||++++...
T Consensus 223 ~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 223 PVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred CCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 432 1 247788899999999988754
No 375
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.05 E-value=0.35 Score=44.15 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=63.2
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||-.|+ |.|..+..+++..|++|+++|.++..++.+++. |. .. .. |..+.. .....+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~--~~-~~--d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GC--HH-TI--NYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TC--SE-EE--ETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC--CE-EE--ECCCHHHHHHHHHHhCCCCC
Confidence 4899999995 567777777777788999999999888777652 32 11 11 322211 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|+.+-.- ..++.+.++|++||++++....
T Consensus 216 d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 216 DVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp EEEEECSCT-------TTHHHHHHTEEEEEEEEECCCT
T ss_pred eEEEECCcH-------HHHHHHHHhhccCCEEEEEecC
Confidence 999865332 3477888999999999887643
No 376
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.03 E-value=0.27 Score=45.16 Aligned_cols=97 Identities=13% Similarity=0.053 Sum_probs=60.2
Q ss_pred CCCEEEEeCCccc-HHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-C-C-CCCCcccEEEe
Q 016981 158 RPKNVVDVGCGIG-GSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-P-FPDGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGcGtG-~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-~-~~~~~fD~V~~ 232 (379)
++.+||=+|+|.+ .++..+++.. +.+|+++|.++.-++.+++. |...-+.....|..+ . . .....+|.++.
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GADVTINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCeEEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 3899999999864 5566666655 78999999999887776652 321111111111111 0 0 12234666654
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
... -...+....+.|++||++++...
T Consensus 239 ~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 239 CAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp CCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred ecc------CcchhheeheeecCCceEEEEec
Confidence 211 15678889999999999988753
No 377
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.87 E-value=0.049 Score=49.29 Aligned_cols=90 Identities=19% Similarity=0.203 Sum_probs=60.9
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CCCC--CCcccEEEe
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFP--DGQFDLVWS 232 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~--~~~fD~V~~ 232 (379)
++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++ .|. . ... |..+ ..+. -+.+|+|+.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~-~~~--~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGA--E-EAA--TYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTC--S-EEE--EGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--C-EEE--ECCcchhHHHHhcCceEEEE
Confidence 4899999997 46788888888778899999999888777654 232 1 112 2211 1000 046999986
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
-.- ..++.+.+.|++||++++...
T Consensus 196 -~g~-------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 196 -VRG-------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp -CSC-------TTHHHHHTTEEEEEEEEEC--
T ss_pred -CCH-------HHHHHHHHhhccCCEEEEEeC
Confidence 321 247788899999999887654
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.68 E-value=1.2 Score=34.35 Aligned_cols=90 Identities=18% Similarity=0.111 Sum_probs=52.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 231 (379)
+++|+=+|+ |.++..+++.+ +.+|+++|.++..++..++. . .+.+..+|..+.. ..-..+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 568998887 45555544433 78999999998776654432 1 3456667764321 1124689888
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCCEEEE
Q 016981 232 SMESGEHMPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
..-.- ......+..+.+.++++ .+++
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 75 AVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp ECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 65211 11234455666777775 4443
No 379
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.57 E-value=0.74 Score=41.73 Aligned_cols=91 Identities=16% Similarity=0.064 Sum_probs=58.1
Q ss_pred CCCEEEEeC-Cc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC-CCCCCCcccEEEecc
Q 016981 158 RPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSME 234 (379)
Q Consensus 158 ~~~~vLDiG-cG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~V~~~~ 234 (379)
++.+||=+| +| .|..+..+++..|++|++++ ++...+.+++ .|.. .++..+-.+ ..-.-..+|+|+-.-
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSCEEEEEESS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccCCCEEEECC
Confidence 389999996 44 68889999988899999998 4554555554 3431 122111111 100114689987532
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 235 SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
. ...+..+.++|++||+++...
T Consensus 224 g-------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 224 G-------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp C-------HHHHHHHGGGEEEEEEEEECC
T ss_pred C-------cHHHHHHHHhccCCCEEEEeC
Confidence 1 233488899999999998754
No 380
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.51 E-value=0.62 Score=42.68 Aligned_cols=93 Identities=18% Similarity=0.177 Sum_probs=62.3
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------CCCCcc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~f 227 (379)
++.+||=.|+|. |.++..+++..|+ .++++|.++.-++.+++ .|. ...+ |..+.. .....+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa---~~~i--~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGA---MQTF--NSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---SEEE--ETTTSCHHHHHHHHGGGCSS
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCC---eEEE--eCCCCCHHHHHHhhcccCCc
Confidence 489999999875 5677778887765 57899999998888766 332 1222 222211 112457
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
|+|+-.-. ....++.+.++|++||++++....
T Consensus 231 d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 231 QLILETAG------VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp EEEEECSC------SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred cccccccc------ccchhhhhhheecCCeEEEEEecc
Confidence 87764321 156788899999999999987643
No 381
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.48 E-value=0.32 Score=44.78 Aligned_cols=89 Identities=16% Similarity=0.159 Sum_probs=61.8
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC------CCCCcccE
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~fD~ 229 (379)
++.+||-+|+ |.|..+..+++..|++|+++ .++..++.+++. |. ..+. +-.+.. .....+|+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga----~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GA----TPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TS----EEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CC----CEec-cCCCHHHHHHHHhcCCCceE
Confidence 4899999994 46888888888779999999 888887777652 32 2222 211110 12346999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+-.-. ...+..+.+.|++||++++..
T Consensus 220 vid~~g-------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTLG-------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESSC-------THHHHHHHHHEEEEEEEEESC
T ss_pred EEECCC-------cHHHHHHHHHHhcCCeEEEEc
Confidence 885422 146888899999999998765
No 382
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.36 E-value=0.4 Score=43.76 Aligned_cols=56 Identities=20% Similarity=0.288 Sum_probs=40.4
Q ss_pred CCeEEEEccCCC-CC-CCCCcccEEEeccccCCC--------------CCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 208 DKVSFQVGDALQ-QP-FPDGQFDLVWSMESGEHM--------------PDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 208 ~~i~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~--------------~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.+..++++|..+ +. +++++||+|++.=-.... ......+.+++++|||||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 357788888765 32 567899999986333211 124678899999999999998864
No 383
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.29 E-value=0.22 Score=45.59 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=64.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-C-CEE-EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---CCCCcccEEEe
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-G-AKC-QGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~-~~v-~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V~~ 232 (379)
..+++|+-||.|.++..+.+.. + ..| .++|+++.+.+..+.++. .. +..+|+.++. ++...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~------~~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK------EE-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC------CC-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC------CC-cccCChhhcCHHHhccCCCCEEEe
Confidence 5799999999999999888763 1 346 699999999998888762 12 5677887763 22236899986
Q ss_pred ccccCC-----------CCCH-HHHHHHHHH-hcCC---CCEEEEEe
Q 016981 233 MESGEH-----------MPDK-SKFVSELAR-VTAP---AGTIIIVT 263 (379)
Q Consensus 233 ~~~l~~-----------~~~~-~~~l~~~~r-~Lkp---gG~l~i~~ 263 (379)
..--.. ..|. ..++.++.+ +++. .-.+++.+
T Consensus 83 gpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lE 129 (327)
T 3qv2_A 83 SPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIE 129 (327)
T ss_dssp CCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEE
T ss_pred cCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEE
Confidence 533222 2343 356666666 5532 13455555
No 384
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.18 E-value=1.2 Score=40.48 Aligned_cols=79 Identities=15% Similarity=0.068 Sum_probs=55.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
+++||=.|++.|. +..+++.+ |.+|++++.++..++.+.+.+...+...++.++.+|+.+.. + ..+
T Consensus 8 ~k~vlVTGas~gI-G~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGANGV-GIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTTSTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 6789988877654 44444433 88999999999988887777766553347889999987742 0 014
Q ss_pred cccEEEeccccCC
Q 016981 226 QFDLVWSMESGEH 238 (379)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (379)
..|+++.+-.+..
T Consensus 87 ~id~lv~nAg~~~ 99 (319)
T 3ioy_A 87 PVSILCNNAGVNL 99 (319)
T ss_dssp CEEEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 6899998776543
No 385
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=91.96 E-value=0.12 Score=47.20 Aligned_cols=94 Identities=18% Similarity=0.175 Sum_probs=62.3
Q ss_pred CC-EEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC--CCC-CCCCCcccEEEe
Q 016981 159 PK-NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA--LQQ-PFPDGQFDLVWS 232 (379)
Q Consensus 159 ~~-~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~--~~~-~~~~~~fD~V~~ 232 (379)
+. +||-+|+ |.|..+..+++..|++|++++.++..++.+++ .|. ..+ +-..+. ... ....+.+|+|+-
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa-~~v-~~~~~~~~~~~~~~~~~~~d~vid 223 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGA-SEV-ISREDVYDGTLKALSKQQWQGAVD 223 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTC-SEE-EEHHHHCSSCCCSSCCCCEEEEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC-cEE-EECCCchHHHHHHhhcCCccEEEE
Confidence 54 8999997 56778888888778899999999877777765 232 111 111111 111 122346899875
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCCEEEEEecc
Q 016981 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (379)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 265 (379)
.-. . ..+....+.|++||++++....
T Consensus 224 ~~g-----~--~~~~~~~~~l~~~G~iv~~G~~ 249 (330)
T 1tt7_A 224 PVG-----G--KQLASLLSKIQYGGSVAVSGLT 249 (330)
T ss_dssp SCC-----T--HHHHHHHTTEEEEEEEEECCCS
T ss_pred CCc-----H--HHHHHHHHhhcCCCEEEEEecC
Confidence 422 2 3688899999999999887643
No 386
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.87 E-value=2.2 Score=37.46 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=51.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEeccc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (379)
.++||=.|+ |.++..+++.+ |.+|++++-++........ .+++++.+|+.++. -..+|+|+....
T Consensus 5 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 5 TGTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CCEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred cCcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCC
Confidence 468999994 88888887766 7899999998765443322 36899999998865 456899987665
Q ss_pred cCCCCC
Q 016981 236 GEHMPD 241 (379)
Q Consensus 236 l~~~~~ 241 (379)
.....+
T Consensus 73 ~~~~~~ 78 (286)
T 3ius_A 73 PDSGGD 78 (286)
T ss_dssp CBTTBC
T ss_pred cccccc
Confidence 544333
No 387
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.81 E-value=3 Score=36.62 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=53.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
+++||=.|++ |.++..+++.+ |.+|++++.++..++...+.+...+.+.++.++.+|+.+.. +. .+
T Consensus 32 ~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 6778888755 45555555444 78999999998877776666666554456888899987642 10 13
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
.+|+|+.+-...
T Consensus 111 ~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 111 GVDICINNAGLA 122 (279)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776543
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=91.71 E-value=0.72 Score=43.70 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=37.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHH
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF------GAKCQGITLSPVQAQRANALAAA 203 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~------~~~v~gvD~s~~~~~~a~~~~~~ 203 (379)
..+|+|+|.|+|.++..+.+.. ..+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4699999999999988887644 24799999999988887777764
No 389
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.64 E-value=0.23 Score=45.65 Aligned_cols=69 Identities=10% Similarity=0.100 Sum_probs=51.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---CCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~V~~~ 233 (379)
..+++|+-||.|.+...+.... + ..|.++|+++.+.+.-+.++. ...+...|+.++. ++...+|+++..
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEec
Confidence 4589999999999999888763 1 357899999999888777652 3446678887763 223368999854
No 390
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.59 E-value=0.72 Score=44.04 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=63.8
Q ss_pred CCCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCC---------------
Q 016981 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--------------- 219 (379)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--------------- 219 (379)
.++.+||=.|+ |.|..+..+++..|++|++++.++..++.+++ .|...-+.....|..+
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchhhhH
Confidence 35899999996 45778888888779999999999988887754 3321111111111100
Q ss_pred ----C-CCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 220 ----Q-PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 220 ----~-~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+ ......+|+|+-.-. ...+....++|++||++++...
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG-------RVTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC-------HHHHHHHHHHSCTTCEEEESCC
T ss_pred HHHHHHHHhCCCceEEEECCC-------chHHHHHHHHHhcCCEEEEEec
Confidence 0 001246899986432 2467888899999999988653
No 391
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.40 E-value=0.16 Score=47.21 Aligned_cols=102 Identities=17% Similarity=0.169 Sum_probs=59.2
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+||=+|+|. |..+..++...|++|+++|.++..++.+++.... .+.....+..++.-.-..+|+|+..-..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 358999999863 4555556665688999999999888877665422 2222211111110001258999865433
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.....+.-+.++..+.++|||.++....
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 2211111123456678999998766543
No 392
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=91.22 E-value=1.1 Score=41.88 Aligned_cols=97 Identities=18% Similarity=0.095 Sum_probs=67.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEccCCCCCCCCCcccEEEeccccC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (379)
+.+||.++.+.|.++..++.. .++.+.-|-......+.+++.+++++ ++.+...- .. ..+.||+|+.... .
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~---~~~~~~~v~~~lp-k 110 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDST-AD---YPQQPGVVLIKVP-K 110 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETT-SC---CCSSCSEEEEECC-S
T ss_pred CCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEecccc-cc---cccCCCEEEEEcC-C
Confidence 568999999999999888753 34555446666677888888888754 36654321 22 2467999886322 2
Q ss_pred CCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+.......|..+...|+||+.+++..
T Consensus 111 ~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 TLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 33334667888899999999998776
No 393
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.06 E-value=0.16 Score=47.37 Aligned_cols=92 Identities=14% Similarity=0.119 Sum_probs=59.3
Q ss_pred CCCCEEEEeC--CcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-----CCCcccE
Q 016981 157 KRPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-----PDGQFDL 229 (379)
Q Consensus 157 ~~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~~~~fD~ 229 (379)
.++.+||=+| .|.|..+..+++..|++|++++ ++...+.+++ .|. . .++ |..+..+ ....+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa--~-~v~--~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGA--D-DVI--DYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTC--S-EEE--ETTSSCHHHHHHTSCCBSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCC--C-EEE--ECCchHHHHHHhhcCCCCE
Confidence 3589999998 3468888888887788999998 6665555543 342 1 112 2221110 1146899
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
|+-.-. .....+....+.|++||++++..
T Consensus 252 vid~~g-----~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDNVG-----GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEESSC-----TTHHHHGGGGBCSSSCCEEEESC
T ss_pred EEECCC-----ChhhhhHHHHHhhcCCcEEEEeC
Confidence 875422 22245677788999999988765
No 394
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.83 E-value=0.16 Score=47.50 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|+=+|+|. |..+..++..+|.+|+++|.++..++.+++.+ +. .+.....+..++.-.-...|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999863 44444555555889999999998877766533 21 2211111111110001357999864322
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.....+.-+.++..+.+||||.++...
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 211111112456678899999877654
No 395
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.77 E-value=2.3 Score=40.22 Aligned_cols=90 Identities=16% Similarity=0.157 Sum_probs=60.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 231 (379)
..+|+=+|+| .++..+++.+ |..|+++|.++..++.+++ . .+.++.+|+.+.. ..-...|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 5678888885 4554444433 7899999999999888764 2 3557889987742 2235688887
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCCEEEEEe
Q 016981 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+.. ++. ...+....+.+.|+..++.-.
T Consensus 74 v~~-----~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 74 NAI-----DDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp ECC-----SSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ECC-----CChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 642 333 344566677888988777654
No 396
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.73 E-value=0.24 Score=46.11 Aligned_cols=94 Identities=12% Similarity=0.058 Sum_probs=61.6
Q ss_pred CCCCEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-----CCCCCcccE
Q 016981 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDL 229 (379)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~ 229 (379)
.++.+||=+|+ |.|..+..+++..|++|+++. ++.-++.+++ .|. -.++...-.+. ...++.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa---~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGA---EEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTC---SEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCC---cEEEECCCchHHHHHHHHccCCccE
Confidence 35899999998 378899999998899999985 7777666654 342 11222111111 012345999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhc-CCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELARVT-APAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~L-kpgG~l~i~~~ 264 (379)
|+-.-. . ...+..+.+.| ++||++++...
T Consensus 235 v~d~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 235 ALDCIT-----N-VESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp EEESSC-----S-HHHHHHHHHHSCTTCEEEEESSC
T ss_pred EEECCC-----c-hHHHHHHHHHhhcCCCEEEEEec
Confidence 874321 1 45678888889 69999988653
No 397
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=90.62 E-value=0.54 Score=42.32 Aligned_cols=69 Identities=20% Similarity=0.162 Sum_probs=51.9
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC---CC-CCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAK---CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FP-DGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~-~~~fD~V 230 (379)
...+++|+=||.|.++..+.+. |.+ |.++|+++.+.+.-+.++ +...+..+|+.++. ++ .+.+|++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcccCCcCEE
Confidence 4679999999999999888876 433 589999999888766654 24567788988763 11 1468999
Q ss_pred Eec
Q 016981 231 WSM 233 (379)
Q Consensus 231 ~~~ 233 (379)
+..
T Consensus 88 ~gg 90 (295)
T 2qrv_A 88 IGG 90 (295)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 398
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.45 E-value=3.1 Score=36.46 Aligned_cols=103 Identities=22% Similarity=0.176 Sum_probs=66.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
++++|=.|++.|. +..+++.+ |.+|+.++. +....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 18 ~k~~lVTGas~gI-G~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 18 GKVALVTGSGRGI-GAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TCEEEESCTTSHH-HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchH-HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6788888876554 44444433 889998775 4555666666565544 47889999987742 1 01
Q ss_pred CcccEEEeccccCCCCC-----H--------------HHHHHHHHHhcCCCCEEEEEec
Q 016981 225 GQFDLVWSMESGEHMPD-----K--------------SKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~~~-----~--------------~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
+..|+++.+-....... . ..+.+.+.+.++.+|++++..-
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 46899997765544321 1 1345667778888998887654
No 399
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=90.45 E-value=1.9 Score=37.70 Aligned_cols=104 Identities=19% Similarity=0.154 Sum_probs=62.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
+++||=.|++.| ++..+++.+ |.+|+.++.++...+.+.+.+.......++.++.+|+.+.. +. -+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 668888886544 444444443 88999999998766655444432111236888899987632 10 13
Q ss_pred cccEEEeccccCCCCCHHHH-----------HHHHHHhcCC-----CCEEEEEe
Q 016981 226 QFDLVWSMESGEHMPDKSKF-----------VSELARVTAP-----AGTIIIVT 263 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~-----------l~~~~r~Lkp-----gG~l~i~~ 263 (379)
..|+++.+-......++... .+.+.+.++. +|+++...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence 58999987765544454332 2344455543 57776654
No 400
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.38 E-value=2.1 Score=37.73 Aligned_cols=102 Identities=19% Similarity=0.119 Sum_probs=67.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 221 (379)
+++||=.|++.|. +..+++.+ |.+|+.+|.+ ...++.+...+...+ .++.++.+|+.+..
T Consensus 10 gk~vlVTGas~gI-G~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 10 DKVVLVTGGARGQ-GRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHH
T ss_pred CCEEEEeCCCChH-HHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHHH
Confidence 6788888876654 44444433 8899999987 666666666665544 47899999987742
Q ss_pred ---CC-----CCcccEEEeccccCCCC------CH-----------HHHHHHHHHhcCCCCEEEEEe
Q 016981 222 ---FP-----DGQFDLVWSMESGEHMP------DK-----------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 222 ---~~-----~~~fD~V~~~~~l~~~~------~~-----------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+. -+..|+++.+-.+.... ++ ..+++.+...++.+|.++...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 10 14689999876554321 11 124556667778889887764
No 401
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.37 E-value=1.2 Score=36.56 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=54.1
Q ss_pred CCEEEEeCCcc-cHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----C-CCCcccEEE
Q 016981 159 PKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----F-PDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~fD~V~ 231 (379)
+.+|+=+|+|. |......+... |..|+++|.++..++.+++ . .+.+..+|..+.. . .-..+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899998863 33322222333 6789999999987766543 2 3455667765421 1 234689888
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCCEEEEE
Q 016981 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~i~ 262 (379)
..- ++. ...+-...+.+.|++.++..
T Consensus 111 ~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 111 LAM-----PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ECC-----SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EeC-----CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 632 222 22333456667777777664
No 402
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.33 E-value=1.3 Score=38.60 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=64.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-C---------CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-F---------PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~---------~~~ 225 (379)
++++|=.|++.|. +..+++.+ |++|+.+|.++..++...+.+ ..++.++.+|+.+.. . .-+
T Consensus 8 gk~~lVTGas~gI-G~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGTHGM-GLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCSSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6788888876654 44444433 889999999988777665544 146889999987742 0 014
Q ss_pred cccEEEeccccCCCC-----CH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 226 QFDLVWSMESGEHMP-----DK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~-----~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
..|+++.+-...... +. ..+.+.+...++.+|.++...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 689998776554321 11 124455666777788877765
No 403
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.09 E-value=1.8 Score=38.03 Aligned_cols=78 Identities=13% Similarity=0.008 Sum_probs=56.8
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----------CCCC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~ 225 (379)
++.+|=-|.+.|. .+..|++. |++|+.+|.+++.++.+.+.+...+ .++.++.+|+.+.. -.-+
T Consensus 9 gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 7788888877664 23444443 8999999999999888887777765 47888899987632 1236
Q ss_pred cccEEEeccccCCC
Q 016981 226 QFDLVWSMESGEHM 239 (379)
Q Consensus 226 ~fD~V~~~~~l~~~ 239 (379)
..|+++.+-.+.+.
T Consensus 86 ~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 86 HVDILINNAGIQYR 99 (255)
T ss_dssp CCCEEEECCCCCCC
T ss_pred CCcEEEECCCCCCC
Confidence 79999987666543
No 404
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.87 E-value=1.6 Score=38.04 Aligned_cols=104 Identities=13% Similarity=0.026 Sum_probs=64.9
Q ss_pred CCCCEEEEeCCc-ccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----
Q 016981 157 KRPKNVVDVGCG-IGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F----- 222 (379)
Q Consensus 157 ~~~~~vLDiGcG-tG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 222 (379)
.++++||=.|++ +|.++..+++.+ |.+|+.++.+....+.+++..+..+ ++.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 357899999975 244454544443 8899999988655555555444432 4788899987742 0
Q ss_pred CCCcccEEEeccccCCC----------CCH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 223 PDGQFDLVWSMESGEHM----------PDK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~~~----------~~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.-+..|+++.+-.+... .+. ..+++.+.+.++++|.++...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 11478999987655331 111 124455666777788877765
No 405
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.86 E-value=2.6 Score=37.50 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=65.6
Q ss_pred CCEEEEeCCccc--H---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----C
Q 016981 159 PKNVVDVGCGIG--G---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (379)
Q Consensus 159 ~~~vLDiGcGtG--~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 223 (379)
++++|=.|++.| . ++..|++. |++|+.++.++...+.+++.....+ ++.++.+|+.+.. + .
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHh
Confidence 778999997643 2 34444544 8899999999766565555544433 5888999987742 1 1
Q ss_pred CCcccEEEeccccCC-------C--CCH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 224 DGQFDLVWSMESGEH-------M--PDK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~-------~--~~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
-+..|+++.+-.+.. + .+. ..+++.+.+.++.+|+++...
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 247899998765543 1 111 134556677788888887765
No 406
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.79 E-value=3.4 Score=36.63 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=54.0
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-C----C------CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P----F------PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~----~------~~ 224 (379)
+++||=.|++.| ++..+++.+ |.+|+.++-+....+.+.+.+...+ ..++.++.+|+.+. . + ..
T Consensus 12 ~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 12 RRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 677887787655 444444433 8899999999988877777666543 24799999998775 2 0 01
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+..|+++.+-.+.
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4789999876654
No 407
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.43 E-value=1.1 Score=41.17 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=53.8
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHcCCEEEEEe-CCHH---HHHHHHHHHHHcCCCCCeEEEEc------cCCCCCCCCC
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGIT-LSPV---QAQRANALAAARGLADKVSFQVG------DALQQPFPDG 225 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD-~s~~---~~~~a~~~~~~~~~~~~i~~~~~------d~~~~~~~~~ 225 (379)
++.+||=+|+ |.|..+..+++..|++++++. .++. ..+.++ ..|. + .++.. ++.+..-..+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa-~--~vi~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGA-E--HVITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTC-S--EEEEHHHHHSGGGGGTTSSSC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCC-c--EEEecCcchHHHHHHHHhCCC
Confidence 4899999996 568889999987788776654 4322 233333 3442 1 12221 1111111112
Q ss_pred cccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.+|+|+-.- .. . .+.+..++|+|||++++..
T Consensus 240 ~~Dvvid~~-----g~-~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 240 QPRLALNCV-----GG-K-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp CCSEEEESS-----CH-H-HHHHHHTTSCTTCEEEECC
T ss_pred CceEEEECC-----Cc-H-HHHHHHHhhCCCCEEEEEe
Confidence 489887432 21 2 2346789999999998864
No 408
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.40 E-value=1.9 Score=37.55 Aligned_cols=103 Identities=16% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCEEEEeCCc--ccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----
Q 016981 159 PKNVVDVGCG--IGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP----- 223 (379)
Q Consensus 159 ~~~vLDiGcG--tG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 223 (379)
++++|=.|++ .|. ++..|+++ |.+|+.++.+....+.+.+.....+- .++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 6789999876 333 34445544 88999999887655655555544332 37899999998742 10
Q ss_pred CCcccEEEeccccCC-------C--CCH---H-----------HHHHHHHHhcCCCCEEEEEe
Q 016981 224 DGQFDLVWSMESGEH-------M--PDK---S-----------KFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~-------~--~~~---~-----------~~l~~~~r~LkpgG~l~i~~ 263 (379)
.+..|+++.+-.+.. + .+. . .+++.+...++++|.++...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 146899887765443 1 111 1 24556777788889887765
No 409
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.35 E-value=0.26 Score=46.02 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=55.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++.+|+=+|+|. |..+..++...|++|+++|.++..++.+++.. +. .+.....+..++.-.-..+|+|+..-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 468999999852 44444444445889999999998776665432 21 2222111111111001358999865433
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.....+.-+.++..+.+||||.++...
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEe
Confidence 211111112466778899999877654
No 410
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.34 E-value=3 Score=37.03 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=63.9
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHH-HHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPV-QAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
+++||=.|++.|. +..+++.+ |.+|+.++.+.. ..+.+.+.....+ .++.++.+|+.+.. + .-
T Consensus 47 gk~vlVTGas~GI-G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGDSGI-GRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHH-HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 7788988876553 44444433 889999998764 3444444444433 47889999987642 1 01
Q ss_pred CcccEEEeccccCCC-C-----CH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 225 GQFDLVWSMESGEHM-P-----DK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~-~-----~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+..|+++.+-..... . +. ..+++.+.+.++.+|+++...
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 468999977544321 1 11 135566677788889877764
No 411
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.99 E-value=1.5 Score=42.42 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=56.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
++++|+=+|+|. |......++.+|.+|+++|.++...+.|++ .| ..+ .+..+. -...|+|+..-.-
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~G----a~~--~~l~e~---l~~aDvVi~atgt 339 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EG----FDV--VTVEEA---IGDADIVVTATGN 339 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---GGGCSEEEECSSS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC----CEE--ecHHHH---HhCCCEEEECCCC
Confidence 489999999874 544555555558899999999987766543 23 222 222221 1358999875333
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.++-+ .+..+.+||||+++...
T Consensus 340 ~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 340 KDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp SCSBC-----HHHHHHSCTTCEEEECS
T ss_pred HHHHH-----HHHHHhcCCCcEEEEeC
Confidence 33211 25667799999987765
No 412
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.94 E-value=5.1 Score=35.13 Aligned_cols=102 Identities=18% Similarity=0.137 Sum_probs=65.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS-PVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
++++|=.|++.|. +..+++.+ |.+|+.++.. ....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 31 gk~~lVTGas~GI-G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 31 GKTAFVTGGSRGI-GAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHH-HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 7789988877654 44444333 8899988654 455555555555544 47889999987642 1 01
Q ss_pred CcccEEEeccccCCCC-----C---H-----------HHHHHHHHHhcCCCCEEEEEe
Q 016981 225 GQFDLVWSMESGEHMP-----D---K-----------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~~-----~---~-----------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+..|+++.+-.+.... + + ..+++.+.+.++.+|.++...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 4689999876554321 1 1 135566777888889888765
No 413
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=88.87 E-value=4.5 Score=36.02 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=51.9
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 221 (379)
++++|=.|++.|. ++..|++. |++|+.+|.+ +..++.+.+.+...+ .++.++.+|+.+..
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLARE-GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDAM 104 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHH
Confidence 6788888877664 33344443 8999999987 666666666665544 47899999997742
Q ss_pred ---C-----CCCcccEEEeccccC
Q 016981 222 ---F-----PDGQFDLVWSMESGE 237 (379)
Q Consensus 222 ---~-----~~~~fD~V~~~~~l~ 237 (379)
+ .-+..|+++.+-.+.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCC
Confidence 1 114789998776543
No 414
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.68 E-value=3.3 Score=36.87 Aligned_cols=102 Identities=21% Similarity=0.238 Sum_probs=65.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCC--HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS--PVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 223 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.+ ....+...+.....+ .++.++.+|+.+.. + .
T Consensus 49 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 678888887655 444444433 8899999886 344555555555544 47888899987642 1 0
Q ss_pred CCcccEEEeccccCCC-C-----CH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 224 DGQFDLVWSMESGEHM-P-----DK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~~-~-----~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
-+..|+++.+-..... . +. ..+++.+...++.+|.++...
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1478999987665331 1 11 134556677788889888765
No 415
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.52 E-value=0.24 Score=46.20 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=58.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC-------------------
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA------------------- 217 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~------------------- 217 (379)
++.+|+=+|+|. |..+..++..+|++|+++|.++..++.+++ .| ..+...+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lG----a~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VG----AQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TT----CEECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC----CeEEeccccccccccchhhhhHHHHhh
Confidence 578999999984 555666666669999999999987776654 12 22322110
Q ss_pred --CCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEE
Q 016981 218 --LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 218 --~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~ 262 (379)
..+.-.-...|+|+..-.+..-..+.-+-+++.+.+|||+.++-.
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 000000146899986432211111122346788889999876543
No 416
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.92 E-value=0.79 Score=43.10 Aligned_cols=42 Identities=17% Similarity=0.367 Sum_probs=34.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANA 199 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 199 (379)
++.+|+=+|+|. |..+..++..+|++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 478999999984 666666777679999999999987777655
No 417
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=87.82 E-value=0.85 Score=41.51 Aligned_cols=66 Identities=14% Similarity=0.053 Sum_probs=48.9
Q ss_pred CEEEEeCCcccHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-CCCcccEEEec
Q 016981 160 KNVVDVGCGIGGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM 233 (379)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~ 233 (379)
++|||+=||.|.++.-+.+. |.+ +.++|+++.+.+.-+.++ + -.+..+|+.++.. .-...|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEec
Confidence 47999999999999888776 544 668999998888777664 1 3567889887632 12358988853
No 418
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.58 E-value=5.1 Score=34.92 Aligned_cols=79 Identities=13% Similarity=-0.003 Sum_probs=53.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-CCCcccE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-PDGQFDL 229 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD~ 229 (379)
++++|=.|++.| ++..+++.+ |.+|+.+|.++..++.+.+.+...+....+.++.+|+.+.. + .-+..|+
T Consensus 10 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 10 GKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 678888886654 444444443 88999999999888777666665543346778888987632 0 1246899
Q ss_pred EEeccccCC
Q 016981 230 VWSMESGEH 238 (379)
Q Consensus 230 V~~~~~l~~ 238 (379)
++.+-....
T Consensus 89 lv~nAg~~~ 97 (267)
T 3t4x_A 89 LINNLGIFE 97 (267)
T ss_dssp EEECCCCCC
T ss_pred EEECCCCCC
Confidence 998765543
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.54 E-value=2.7 Score=36.43 Aligned_cols=102 Identities=16% Similarity=0.115 Sum_probs=63.8
Q ss_pred CCEEEEeCCcccHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKK----FGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
+++||=.|+ +|.++..+++. .|.+|++++-++...+...+.+...+ .++.++.+|+.+.. +. .
T Consensus 4 ~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 4 IHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 667887775 45555444432 36899999999887776666665543 46889999987642 10 1
Q ss_pred CcccEEEeccccCCCC----C----H-----------HHHHHHHHHhcCCCCEEEEEe
Q 016981 225 GQFDLVWSMESGEHMP----D----K-----------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~~----~----~-----------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+.+|+|+.+-...... . . ..+++.+.+.++++|++++..
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 3689998765443211 1 1 124455666667778877764
No 420
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.31 E-value=3.8 Score=34.81 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=49.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EEEEccCCC-CCCCCCcccEEEec
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKV-SFQVGDALQ-QPFPDGQFDLVWSM 233 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~d~~~-~~~~~~~fD~V~~~ 233 (379)
+++||=.|+ +|.++..+++.+ |.+|++++-++..++.... .++ .++.+|+.+ +.-.-+..|+|+.+
T Consensus 21 ~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 21 GMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 788998875 555666655544 7899999998765544322 257 889999862 11112468999987
Q ss_pred cccCCCCCH
Q 016981 234 ESGEHMPDK 242 (379)
Q Consensus 234 ~~l~~~~~~ 242 (379)
.......++
T Consensus 92 ag~~~~~~~ 100 (236)
T 3e8x_A 92 AGSGPHTGA 100 (236)
T ss_dssp CCCCTTSCH
T ss_pred CCCCCCCCc
Confidence 665544443
No 421
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=87.19 E-value=4.8 Score=35.31 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=52.4
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITL-------------SPVQAQRANALAAARGLADKVSFQVGDALQQP- 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 221 (379)
++++|=.|++.|. ++..|+++ |.+|+.+|. +...++...+.+...+ .++.++.+|+.+..
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAE-GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDFDR 87 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence 6788888876654 33344443 889999998 6777766666665544 47889999987742
Q ss_pred ----CC-----CCcccEEEeccccCC
Q 016981 222 ----FP-----DGQFDLVWSMESGEH 238 (379)
Q Consensus 222 ----~~-----~~~fD~V~~~~~l~~ 238 (379)
+. -+..|+++.+-.+..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 11 146899998766544
No 422
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.15 E-value=0.6 Score=43.18 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=56.5
Q ss_pred CC-CEEEEeCC--cccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc------cCCC-C-CC---C
Q 016981 158 RP-KNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG------DALQ-Q-PF---P 223 (379)
Q Consensus 158 ~~-~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~------d~~~-~-~~---~ 223 (379)
++ .+||=+|+ |.|..+..+++..|++++++.-++..+...++.++..|.. .++.. |+.+ + .. .
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHhhcc
Confidence 47 89999986 4688888999877999988875544311111222233431 11211 1110 0 00 1
Q ss_pred CCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
.+.+|+|+-.-. . .... .+.++|++||++++...
T Consensus 243 ~~g~Dvvid~~G-----~-~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 243 GGEAKLALNCVG-----G-KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp TCCEEEEEESSC-----H-HHHH-HHHHTSCTTCEEEECCC
T ss_pred CCCceEEEECCC-----c-hhHH-HHHHHhccCCEEEEecC
Confidence 246999985321 1 2233 67899999999988654
No 423
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.85 E-value=0.44 Score=44.67 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=32.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANA 199 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~ 199 (379)
++.+|+=+|+|. |..+..+++.+|++|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 488999999984 555666677678899999999876665543
No 424
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.76 E-value=3.3 Score=36.43 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=52.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC---------CCCc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---------PDGQ 226 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------~~~~ 226 (379)
++++|=.|++.| ++..+++.+ |++|+.+|.++..++.+.+.+...+ .++.++.+|+.+..- ..+.
T Consensus 33 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 33 GRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 678888886655 444444433 8899999998877777666665544 478899999877530 0147
Q ss_pred ccEEEeccccC
Q 016981 227 FDLVWSMESGE 237 (379)
Q Consensus 227 fD~V~~~~~l~ 237 (379)
.|+++.+-...
T Consensus 110 iD~lvnnAg~~ 120 (275)
T 4imr_A 110 VDILVINASAQ 120 (275)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876653
No 425
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.60 E-value=2.1 Score=38.22 Aligned_cols=102 Identities=19% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCCEEEEeCCcc--cH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC----
Q 016981 158 RPKNVVDVGCGI--GG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP---- 223 (379)
Q Consensus 158 ~~~~vLDiGcGt--G~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 223 (379)
.++++|=.|++. |. ++..|++. |++|+.+|.++...+.+.+.....+ ++.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 367899998754 32 34444444 8899999998765555555544433 4678899987742 10
Q ss_pred -CCcccEEEeccccCCC---------CC---H-----------HHHHHHHHHhcCCCCEEEEEe
Q 016981 224 -DGQFDLVWSMESGEHM---------PD---K-----------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 224 -~~~fD~V~~~~~l~~~---------~~---~-----------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
-+..|+++.+-.+... .+ + ..+++.+...++.+|.++...
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 1468999987655421 11 1 124555666777888887765
No 426
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.57 E-value=0.43 Score=42.04 Aligned_cols=21 Identities=10% Similarity=0.320 Sum_probs=17.8
Q ss_pred HHHHHHHHHhcCCCCEEEEEe
Q 016981 243 SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 243 ~~~l~~~~r~LkpgG~l~i~~ 263 (379)
...+.++.++|+|||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 567888999999999998863
No 427
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.46 E-value=2.4 Score=37.57 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=66.0
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----------CCCC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~ 225 (379)
++.+|=-|.+.|. .+..|++. |++|+.+|.+.+.++.+.+.+ + .++.++.+|+.+.. -.-+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 7888888887764 33444443 899999999998887665544 2 46778899987632 0125
Q ss_pred cccEEEeccccCCCC---C-----HH-----------HHHHHHHHhcCCCCEEEEEe
Q 016981 226 QFDLVWSMESGEHMP---D-----KS-----------KFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~---~-----~~-----------~~l~~~~r~LkpgG~l~i~~ 263 (379)
..|+++.+-...... + ++ .+.+.+.+.|+.+|.++...
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 789998776554331 1 11 24456667788888877664
No 428
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.42 E-value=3.3 Score=36.20 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=56.6
Q ss_pred CCCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 158 RPKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 158 ~~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
+++.+|=-|.+.|. .+..+++. |++|+.+|.+++.++.+.+.++..+ .++.++.+|+.+.. + .-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 37888888877775 33444444 8999999999999988888887766 47889999997742 0 12
Q ss_pred CcccEEEecccc
Q 016981 225 GQFDLVWSMESG 236 (379)
Q Consensus 225 ~~fD~V~~~~~l 236 (379)
+..|+++.+-.+
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 679999987654
No 429
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.76 E-value=1.7 Score=37.84 Aligned_cols=102 Identities=18% Similarity=0.131 Sum_probs=63.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEE-eCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGI-TLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
++++|=.|++.|. +..+++.+ |++|+.+ +.+....+.+.+.+...+ .++.++.+|+.+.. + .-
T Consensus 8 ~k~vlVTGas~GI-G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGRDI-GRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchH-HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 6788888877654 44444333 8899888 666666666665555443 47889999987742 1 01
Q ss_pred CcccEEEeccccC-C---CCC--H--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 225 GQFDLVWSMESGE-H---MPD--K--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 225 ~~fD~V~~~~~l~-~---~~~--~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+..|+++.+-... . +.+ . ..+.+.+.+.++++|.++...
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 4689998765433 1 111 1 124455666677788877764
No 430
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=85.74 E-value=3.1 Score=36.21 Aligned_cols=76 Identities=24% Similarity=0.133 Sum_probs=50.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
+++||=.|+ +|.++..+++.+ |.+|++++- ++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 21 ~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 21 GKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 677887775 455566655544 789999998 7776666555555443 46888999987642 10 1
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+.+|+|+.+-...
T Consensus 98 ~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 98 GGLDFVMSNSGME 110 (274)
T ss_dssp SCEEEEECCCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689998765543
No 431
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=85.63 E-value=5.2 Score=31.48 Aligned_cols=94 Identities=10% Similarity=0.072 Sum_probs=57.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS-PVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLV 230 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V 230 (379)
..+|+=+|+ |..+..+++.+ |..|+.+|.+ +...+...... +..+.++.+|..+.. ..-...|+|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 457888876 66666665544 7899999997 44444333322 135788899986531 112467888
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEE
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~ 262 (379)
++...- ......+....+.+.|...++..
T Consensus 76 i~~~~~---d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 76 LALSDN---DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EECSSC---HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEecCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 764211 11244556667777787777663
No 432
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.55 E-value=0.43 Score=45.03 Aligned_cols=41 Identities=22% Similarity=0.387 Sum_probs=32.3
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRAN 198 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~ 198 (379)
++.+|+=+|+|. |..+..+++.+|++|+++|.++..++.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 478999999984 55566667767889999999987766653
No 433
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.39 E-value=8.4 Score=32.93 Aligned_cols=75 Identities=12% Similarity=0.110 Sum_probs=50.0
Q ss_pred CCCCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-CCCcc
Q 016981 157 KRPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-PDGQF 227 (379)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~f 227 (379)
.++++||=.|++.| ++..+++.+ |.+|+.++.++..++...+.+ ..++.+..+|+.+.. + ..+..
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 35788898887655 444444433 789999999988777665544 247888899987631 1 12468
Q ss_pred cEEEeccccC
Q 016981 228 DLVWSMESGE 237 (379)
Q Consensus 228 D~V~~~~~l~ 237 (379)
|+++.+-...
T Consensus 86 d~li~~Ag~~ 95 (249)
T 3f9i_A 86 DILVCNAGIT 95 (249)
T ss_dssp SEEEECCC--
T ss_pred CEEEECCCCC
Confidence 9999776543
No 434
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=85.24 E-value=4.6 Score=30.99 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=50.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 231 (379)
..+|+=+|+ |..+..+++.+ |.+|+++|.++..++.+++ ....+..+|..+.. ..-+.+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~--------~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--------YATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT--------TCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 567999997 55555555443 7789999998866543321 12455667765421 1124689888
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCCEEEE
Q 016981 232 SMESGEHMPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
..-.-. .+....+....+.+.+. .++.
T Consensus 76 ~~~~~~--~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 76 VAIGAN--IQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp ECCCSC--HHHHHHHHHHHHHTTCS-EEEE
T ss_pred ECCCCc--hHHHHHHHHHHHHcCCC-eEEE
Confidence 643211 01123444555666675 5544
No 435
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=84.88 E-value=5.8 Score=34.71 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=53.1
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP- 221 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 221 (379)
.++++|=.|++.| ++..+++.+ |++|+.+|.+ ...++...+.+...+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 3678888887655 344444433 8899999987 666666665555544 47999999997742
Q ss_pred ----CC-----CCcccEEEeccccCCC
Q 016981 222 ----FP-----DGQFDLVWSMESGEHM 239 (379)
Q Consensus 222 ----~~-----~~~fD~V~~~~~l~~~ 239 (379)
+. -+..|+++.+-.+...
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 10 1478999987766543
No 436
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=84.83 E-value=7.3 Score=34.22 Aligned_cols=74 Identities=20% Similarity=0.148 Sum_probs=50.4
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.|. ++..|++. |.+|+.+|.++..++.+.+.+ + .++.++.+|+.+.. + .-+
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKI---G--CGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 6788888876654 33444444 889999999988776655544 2 46888999987742 1 014
Q ss_pred cccEEEeccccCC
Q 016981 226 QFDLVWSMESGEH 238 (379)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (379)
..|+++.+-.+.+
T Consensus 103 ~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 103 GVDKLVANAGVVH 115 (277)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998766543
No 437
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=84.55 E-value=6 Score=34.56 Aligned_cols=102 Identities=19% Similarity=0.116 Sum_probs=64.7
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEe-CCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGIT-LSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD-~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
++++|=.|++.|. ++..|++. |.+|+.++ -+....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6788888876654 34444444 88988874 45555665555555544 47889999987642 1 01
Q ss_pred CcccEEEeccccCCCCC--------HH-----------HHHHHHHHhcCCCCEEEEEe
Q 016981 225 GQFDLVWSMESGEHMPD--------KS-----------KFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~~~--------~~-----------~~l~~~~r~LkpgG~l~i~~ 263 (379)
+..|+++.+-.+..... +. .+++.+.+.++.+|+++...
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 47899998765543321 11 24556677778888887765
No 438
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.26 E-value=2.8 Score=38.32 Aligned_cols=89 Identities=16% Similarity=0.042 Sum_probs=57.7
Q ss_pred CEEEEe-CCc-ccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC--------CCCcccE
Q 016981 160 KNVVDV-GCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF--------PDGQFDL 229 (379)
Q Consensus 160 ~~vLDi-GcG-tG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~fD~ 229 (379)
.+||=. |+| .|..+..+++..|++|+++|.++..++.+++ .|. . ..+ |..+..+ ....+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga--~-~~~--~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGA--A-HVL--NEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTC--S-EEE--ETTSTTHHHHHHHHHHHHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--C-EEE--ECCcHHHHHHHHHHhcCCCCcE
Confidence 566654 333 5677777887778999999999988887765 232 1 122 2222111 1136999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+-.-. ...+..+.+.|++||++++...
T Consensus 237 vid~~g-------~~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 237 FLDAVT-------GPLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEESSC-------HHHHHHHHHHSCTTCEEEECCC
T ss_pred EEECCC-------ChhHHHHHhhhcCCCEEEEEec
Confidence 985432 2335778899999999998764
No 439
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=83.99 E-value=2.1 Score=34.01 Aligned_cols=93 Identities=22% Similarity=0.223 Sum_probs=50.8
Q ss_pred CCCEEEEeCCcccHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKK---FGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V 230 (379)
++.+|+=+|+| .++..+++. .|.+|+++|.++..++.++. . ....++.+|..+.. ..-..+|+|
T Consensus 18 ~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 18 KSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCEE
Confidence 47899999985 444333332 37899999998866544321 1 23455666654321 112458888
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEE
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~ 262 (379)
+..-.- ......+..+.+.+.|...++..
T Consensus 89 i~~~~~---~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 89 FAFTND---DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp EECSSC---HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEEeCC---cHHHHHHHHHHHHHCCCCeEEEE
Confidence 864221 11233444455555555555543
No 440
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.75 E-value=2.6 Score=35.58 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=55.4
Q ss_pred EEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEEec
Q 016981 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVWSM 233 (379)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~~~ 233 (379)
+|+=+|+ |.++..+++.+ +..|+++|.++..++...+. ..+.++.+|..+.. ..-...|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 4666776 56666666544 78999999999877764432 14678889987632 112468888864
Q ss_pred cccCCCCCH--HHHHHHHHHhcCCCCEEEE
Q 016981 234 ESGEHMPDK--SKFVSELARVTAPAGTIII 261 (379)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~r~LkpgG~l~i 261 (379)
. ++. ...+..+.+.+.|...++.
T Consensus 73 ~-----~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 73 T-----PRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp C-----SCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred c-----CCcHHHHHHHHHHHHHcCCCeEEE
Confidence 2 232 3455556666667766654
No 441
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=83.72 E-value=6.5 Score=33.87 Aligned_cols=76 Identities=21% Similarity=0.148 Sum_probs=49.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
+++||=.|++ |.++..+++.+ |.+|+.++- ++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 7 ~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 7 GKVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 6678877754 55555555544 789999998 7766665555554433 46888899987632 10 1
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+.+|+|+.+-...
T Consensus 84 g~id~li~~Ag~~ 96 (261)
T 1gee_A 84 GKLDVMINNAGLE 96 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689998776543
No 442
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.69 E-value=5.4 Score=35.06 Aligned_cols=102 Identities=19% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHH-HHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPV-QAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
++++|=.|++. .++..+++.+ |.+|+.++.+.. ..+.+.+.+...+ .++.++.+|+.+.. +. -
T Consensus 29 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 29 GKVALVTGAGR-GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56788777655 4455555444 889999988754 3444444444433 46888899987632 10 1
Q ss_pred CcccEEEeccccCCCC-----CH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 225 GQFDLVWSMESGEHMP-----DK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~~-----~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+..|+++.+-...... +. ..+++.+.+.|+.+|+++...
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 4689999876554321 11 124456667777788887765
No 443
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.67 E-value=4.6 Score=38.14 Aligned_cols=88 Identities=18% Similarity=0.148 Sum_probs=53.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
.+++|+=+|+|. |......++.+|++|+++|.++.....+.. .| .. ..++.+. -...|+|+....-
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~----~G----~~--v~~Leea---l~~ADIVi~atgt 285 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM----DG----FR--LVKLNEV---IRQVDIVITCTGN 285 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CE--ECCHHHH---TTTCSEEEECSSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH----cC----CE--eccHHHH---HhcCCEEEECCCC
Confidence 488999999985 544445555558999999999865443332 12 22 2233222 1357998874222
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.++-+ .+..+.+|||+.++-+.
T Consensus 286 ~~lI~-----~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 286 KNVVT-----REHLDRMKNSCIVCNMG 307 (435)
T ss_dssp SCSBC-----HHHHHHSCTTEEEEECS
T ss_pred cccCC-----HHHHHhcCCCcEEEEec
Confidence 23211 25667899998776654
No 444
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.35 E-value=10 Score=32.67 Aligned_cols=73 Identities=19% Similarity=0.161 Sum_probs=49.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.+|.+...++...+.+ ..++.++.+|+.+.. + .-+
T Consensus 8 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITGSARG-IGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 678888886654 444444433 889999999987766655443 246888999987632 1 124
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-...
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999876654
No 445
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.74 E-value=13 Score=32.85 Aligned_cols=89 Identities=17% Similarity=0.064 Sum_probs=51.4
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-ccCCCCCCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV-GDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~V~~~~~ 235 (379)
++++|+=+|+|. |......+..+|.+|+++|.++...+.+. ..| +.... .+..+. -...|+|+..-.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~l~~~---l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFHISKAAQE---LRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEEGGGHHHH---TTTCSEEEECCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecChhhHHHH---hcCCCEEEECCC
Confidence 488999999864 33333333444889999999986554433 222 23221 121111 145899987655
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.+.+ +. +..+.+|||+.++-..
T Consensus 223 ~~~i-~~-----~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 223 ALVV-TA-----NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp SCCB-CH-----HHHHHSCTTCEEEECS
T ss_pred hHHh-CH-----HHHHhcCCCCEEEEec
Confidence 4333 22 2445789998766543
No 446
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=82.47 E-value=13 Score=32.18 Aligned_cols=77 Identities=18% Similarity=0.144 Sum_probs=50.9
Q ss_pred CCCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CCCCcccE
Q 016981 158 RPKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~ 229 (379)
.++.+|=-|.+.|. .+..|++. |++|+.+|.+.. +.+.+.+...+ .++.++.+|+.+.. +..+..|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 37788888877765 34444444 899999998743 23334444444 47888999987642 44578999
Q ss_pred EEeccccCCC
Q 016981 230 VWSMESGEHM 239 (379)
Q Consensus 230 V~~~~~l~~~ 239 (379)
++.+-.+...
T Consensus 83 LVNNAGi~~~ 92 (247)
T 4hp8_A 83 LVNNAGIIRR 92 (247)
T ss_dssp EEECCCCCCC
T ss_pred EEECCCCCCC
Confidence 9987665443
No 447
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=81.66 E-value=13 Score=32.63 Aligned_cols=75 Identities=16% Similarity=0.094 Sum_probs=48.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCH-HHHHHHHHHHH-HcCCCCCeEEEEccCCC----CC-----C--
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSP-VQAQRANALAA-ARGLADKVSFQVGDALQ----QP-----F-- 222 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~-~~~~~a~~~~~-~~~~~~~i~~~~~d~~~----~~-----~-- 222 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.++ ..++.+.+.+. ..+ .++.++.+|+.+ .. +
T Consensus 23 ~k~~lVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 23 APAAVVTGAAKR-IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCEEEETTCSSH-HHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHHHHHH
Confidence 667887776654 444444433 88999999887 66655555444 333 478899999887 21 0
Q ss_pred ---CCCcccEEEecccc
Q 016981 223 ---PDGQFDLVWSMESG 236 (379)
Q Consensus 223 ---~~~~fD~V~~~~~l 236 (379)
.-+..|+++.+-.+
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 01468999987654
No 448
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=81.37 E-value=1.3 Score=34.56 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHcCCCCCeEEEEcc-CC--CCCCCCCcccEEEeccccC-C-CCCHHHHHHHHHHhcCCCCEEEE
Q 016981 190 SPVQAQRANALAAARGLADKVSFQVGD-AL--QQPFPDGQFDLVWSMESGE-H-MPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 190 s~~~~~~a~~~~~~~~~~~~i~~~~~d-~~--~~~~~~~~fD~V~~~~~l~-~-~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
.|+.++.++....+.+ ...+.....| +. ...+++..||.|+...--. . ..-+..++..+++.|||||.|.-
T Consensus 21 ~pe~le~~k~~~~~~~-~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKK-VKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTT-EEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhccc-cchhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4666777776665521 0123333333 11 1246689999998644322 2 23348999999999999999875
No 449
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=81.27 E-value=1.4 Score=42.54 Aligned_cols=60 Identities=15% Similarity=0.011 Sum_probs=43.7
Q ss_pred CCCEEEEeCCcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 220 (379)
...+++|+=||.|.++.-+.+.....|.++|+++.+.+.-+.++. ..+...++..|+.++
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDI 146 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhh
Confidence 357999999999999988877532348899999988887766542 112445667887654
No 450
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.00 E-value=8.3 Score=33.46 Aligned_cols=75 Identities=19% Similarity=0.107 Sum_probs=54.2
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.|. ++..|+++ |.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. + .-+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 7789988887664 34444444 8899999999988888777776654 47899999987742 1 124
Q ss_pred cccEEEecccc
Q 016981 226 QFDLVWSMESG 236 (379)
Q Consensus 226 ~fD~V~~~~~l 236 (379)
..|+++.+-..
T Consensus 88 ~id~lv~nAg~ 98 (264)
T 3ucx_A 88 RVDVVINNAFR 98 (264)
T ss_dssp CCSEEEECCCS
T ss_pred CCcEEEECCCC
Confidence 78999977643
No 451
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.87 E-value=7.1 Score=35.18 Aligned_cols=89 Identities=20% Similarity=0.262 Sum_probs=55.2
Q ss_pred CCEEEEeCCcc--cHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecc
Q 016981 159 PKNVVDVGCGI--GGSSRYLAKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME 234 (379)
Q Consensus 159 ~~~vLDiGcGt--G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~ 234 (379)
..+|.=||+|. |.++..+.+. |. +|+++|.++..++.+++ .|. +.-...|..+. .-...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~----~G~---~~~~~~~~~~~--~~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGI---IDEGTTSIAKV--EDFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTS---CSEEESCTTGG--GGGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH----CCC---cchhcCCHHHH--hhccCCEEEEeC
Confidence 46899999874 2344445444 66 99999999988776653 332 11122333320 123579998653
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCCEEE
Q 016981 235 SGEHMPDKSKFVSELARVTAPAGTII 260 (379)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~ 260 (379)
-.. ....+++++...|+||..++
T Consensus 103 p~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CHH---HHHHHHHHHhhccCCCcEEE
Confidence 322 24678899999999987554
No 452
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=80.10 E-value=5.8 Score=34.52 Aligned_cols=102 Identities=20% Similarity=0.191 Sum_probs=63.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCC---HHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS---PVQAQRANALAAARGLADKVSFQVGDALQQP-----F----- 222 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s---~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 222 (379)
++++|=.|++.| ++..+++.+ |++|+.++.+ ...++...+.+...+ .++.++.+|+.+.. +
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 678888887655 455555554 7899998754 344555555454433 47889999987742 1
Q ss_pred CCCcccEEEeccccCCCCC-----H---H-----------HHHHHHHHhcCCCCEEEEEe
Q 016981 223 PDGQFDLVWSMESGEHMPD-----K---S-----------KFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~-----~---~-----------~~l~~~~r~LkpgG~l~i~~ 263 (379)
.-+..|+++.+-.+..... . . .+++.+.+.|+++|.+++..
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 0147899998765543211 1 1 24445556667788887764
No 453
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.99 E-value=8.1 Score=33.36 Aligned_cols=76 Identities=17% Similarity=0.129 Sum_probs=53.6
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
++++|=.|++.|. ++..|+++ |.+|+.+|.+...++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6788888876654 23344444 8899999999988887777776654 47889999987742 10 14
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-...
T Consensus 89 ~id~lv~nAg~~ 100 (256)
T 3gaf_A 89 KITVLVNNAGGG 100 (256)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876554
No 454
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.95 E-value=13 Score=32.96 Aligned_cols=78 Identities=21% Similarity=0.252 Sum_probs=51.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
++++|=.|++. .++..+++.+ |.+|+.++.++..++...+.+...+. ..++.++.+|+.+.. +. -
T Consensus 26 ~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVIITGSSN-GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 66788777654 4455555444 88999999998877766665554331 116888999987642 10 1
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+.+|+++.+-.+.
T Consensus 105 g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 105 GKIDILVNNAGAN 117 (297)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3689999876543
No 455
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=79.91 E-value=7.4 Score=33.36 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=53.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
+++||=.|++.| ++..+++++ |.+|+.+|.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 9 ~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 9 NKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 678888887654 444444443 8899999999988888777776554 47889999987742 1 013
Q ss_pred cccEEEecccc
Q 016981 226 QFDLVWSMESG 236 (379)
Q Consensus 226 ~fD~V~~~~~l 236 (379)
..|+++.+-.+
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987654
No 456
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.87 E-value=9.1 Score=33.33 Aligned_cols=77 Identities=19% Similarity=0.130 Sum_probs=53.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
+++||=.|++ |.++..+++.+ |.+|+++|.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 6788888865 45555555544 7899999999887776666665543 47889999987632 1 014
Q ss_pred cccEEEeccccCC
Q 016981 226 QFDLVWSMESGEH 238 (379)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (379)
.+|+|+.+-....
T Consensus 108 ~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 108 DVSILVNNAGVVY 120 (272)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCcEEEECCCcCC
Confidence 6899998765543
No 457
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=79.73 E-value=8 Score=34.41 Aligned_cols=77 Identities=19% Similarity=0.069 Sum_probs=55.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
+++||=.|++.|. +..+++.+ |.+|+.++.++..++.+.+.+...+ .++.++.+|+.+.. +. .+
T Consensus 31 gk~vlVTGas~gI-G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 31 GRAAVVTGGASGI-GLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 6789988877653 44444433 8899999999998888877776654 47899999987742 00 14
Q ss_pred cccEEEeccccCC
Q 016981 226 QFDLVWSMESGEH 238 (379)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (379)
..|+++.+-.+..
T Consensus 108 ~id~lvnnAg~~~ 120 (301)
T 3tjr_A 108 GVDVVFSNAGIVV 120 (301)
T ss_dssp SCSEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 6899998766543
No 458
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=79.40 E-value=11 Score=32.64 Aligned_cols=76 Identities=17% Similarity=0.049 Sum_probs=44.8
Q ss_pred CCEEEEeCCcc-cHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
+++||=.|+++ |.++..+++.+ |.+|+.++.++...+.+++.....+ +..++.+|+.+.. + .-
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67888888752 45555555544 7899999987621122222222222 3467888987631 0 12
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+..|+++.+-.+.
T Consensus 86 g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 86 PKFDGFVHSIGFA 98 (265)
T ss_dssp SSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999876554
No 459
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=79.29 E-value=26 Score=31.10 Aligned_cols=79 Identities=18% Similarity=0.096 Sum_probs=50.3
Q ss_pred CCCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EccCCCCC-CC--CCcccEE
Q 016981 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQQP-FP--DGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~-~~--~~~fD~V 230 (379)
++++||=.|+ +|.++..+++.+ |.+|++++-++...+.....+.... ..++.++ .+|+.+.. +. -..+|+|
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 3678888775 566666666544 7899999998876555444433211 1468888 78987642 11 1358999
Q ss_pred EeccccCC
Q 016981 231 WSMESGEH 238 (379)
Q Consensus 231 ~~~~~l~~ 238 (379)
+.......
T Consensus 88 ih~A~~~~ 95 (342)
T 1y1p_A 88 AHIASVVS 95 (342)
T ss_dssp EECCCCCS
T ss_pred EEeCCCCC
Confidence 87655443
No 460
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.19 E-value=7.6 Score=36.87 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc
Q 016981 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG 215 (379)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~ 215 (379)
..+..++.+.+..+..- .+++|+=+|+|. |......++.+|++|+++|.++.....+.. .| ..+ .
T Consensus 229 ~~eslvdgI~Ratg~~L----~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~----~G----~~v--v 294 (464)
T 3n58_A 229 CKESLVDGIRRGTDVMM----AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM----DG----FEV--V 294 (464)
T ss_dssp HHHHHHHHHHHHHCCCC----TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH----TT----CEE--C
T ss_pred chHHHHHHHHHhcCCcc----cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh----cC----cee--c
Confidence 33445555555444322 489999999885 544445555558999999999865433321 22 222 2
Q ss_pred cCCCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 216 DALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 216 d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
++.+. -...|+|+..-.-.|+ +-.+....+|||+.|+-+.
T Consensus 295 ~LeEl---L~~ADIVv~atgt~~l-----I~~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 295 TLDDA---ASTADIVVTTTGNKDV-----ITIDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp CHHHH---GGGCSEEEECCSSSSS-----BCHHHHHHSCTTEEEEECS
T ss_pred cHHHH---HhhCCEEEECCCCccc-----cCHHHHhcCCCCeEEEEcC
Confidence 33222 1357988864322233 1245667889999887654
No 461
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=79.04 E-value=9.4 Score=32.56 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=53.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----------CCCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.++...+...+.+...+ .++.++.+|+.+.. -..+
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 677888886554 444444433 8899999999988887777776654 47899999987632 0124
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-.+.
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876554
No 462
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.97 E-value=3.8 Score=35.92 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=48.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC-CCCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARG-LADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
+++||=.|++. .++..+++.+ |.+|+.++.++..++.+.+.+.... ...++.++.+|+.+.. +. -
T Consensus 6 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 6 EKVAIITGSSN-GIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 56788777654 4455544443 8899999999887766655542111 1236888899987632 10 1
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+..|+++.+-...
T Consensus 85 g~id~lv~~Ag~~ 97 (278)
T 1spx_A 85 GKLDILVNNAGAA 97 (278)
T ss_dssp SCCCEEEECCC--
T ss_pred CCCCEEEECCCCC
Confidence 3689998776543
No 463
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=78.72 E-value=4.7 Score=34.89 Aligned_cols=77 Identities=17% Similarity=0.096 Sum_probs=54.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C----CCCc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F----PDGQ 226 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----~~~~ 226 (379)
++++|=.|++.|. +..+++.+ |.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. + ..+.
T Consensus 7 ~k~vlVTGas~GI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 7 NATVAVIGAGDYI-GAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp SCEEEEECCSSHH-HHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 6788888877654 44444433 8899999999888887777776654 47899999987742 1 0157
Q ss_pred ccEEEeccccCC
Q 016981 227 FDLVWSMESGEH 238 (379)
Q Consensus 227 fD~V~~~~~l~~ 238 (379)
.|+++.+-.+..
T Consensus 84 id~lv~nAg~~~ 95 (252)
T 3h7a_A 84 LEVTIFNVGANV 95 (252)
T ss_dssp EEEEEECCCCCC
T ss_pred ceEEEECCCcCC
Confidence 899998766543
No 464
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=78.72 E-value=11 Score=32.38 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=51.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
+++||=.|++ |.++..+++.+ |.+|+++|.++...+...+.+...+ .++.++.+|+.+.. +. .+
T Consensus 13 ~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 13 NRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 6788888765 45555555544 7899999999877766655555443 46889999987642 10 13
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
.+|+|+.+-...
T Consensus 90 ~id~vi~~Ag~~ 101 (260)
T 3awd_A 90 RVDILVACAGIC 101 (260)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998775543
No 465
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=78.64 E-value=9.9 Score=33.59 Aligned_cols=78 Identities=14% Similarity=0.032 Sum_probs=53.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CC---EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC--------C--
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GA---KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------F-- 222 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~-- 222 (379)
++++|=.|++.|. +..+++.+ |. +|+.++.+...++.+.+.+.......++.++.+|+.+.. .
T Consensus 33 ~k~~lVTGas~GI-G~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGASAGI-GKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTTSHH-HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCCChH-HHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 7789988876654 44444333 44 999999999888877776665432347888999987642 1
Q ss_pred CCCcccEEEeccccC
Q 016981 223 PDGQFDLVWSMESGE 237 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~ 237 (379)
.-+..|+++.+-...
T Consensus 112 ~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 112 EFKDIDILVNNAGKA 126 (287)
T ss_dssp GGCSCCEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 124789999876543
No 466
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=78.52 E-value=7.7 Score=33.60 Aligned_cols=75 Identities=16% Similarity=0.150 Sum_probs=53.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
+++||=.|++. .++..+++.+ |.+|+.++-++..++...+.+...+ .++.++.+|+.+.. + ..+
T Consensus 29 ~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 29 GQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 67888888654 4455555444 8899999999988888777776654 47889999987642 1 014
Q ss_pred cccEEEecccc
Q 016981 226 QFDLVWSMESG 236 (379)
Q Consensus 226 ~fD~V~~~~~l 236 (379)
..|+++.+-.+
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987655
No 467
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=78.51 E-value=9.6 Score=33.93 Aligned_cols=89 Identities=13% Similarity=0.121 Sum_probs=52.0
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-ccCCCCCCCCCcccEEEeccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV-GDALQQPFPDGQFDLVWSMES 235 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~V~~~~~ 235 (379)
++.+|+=+|+|. |......+..+|.+|+++|.++...+.+.+ .+ +.... .+..+. -...|+|+..-.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g----~~~~~~~~l~~~---l~~aDvVi~~~p 224 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE----MG----LVPFHTDELKEH---VKDIDICINTIP 224 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT----CEEEEGGGHHHH---STTCSEEEECCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC----CeEEchhhHHHH---hhCCCEEEECCC
Confidence 488999999864 333333333448899999999865443322 22 22221 122111 246899988766
Q ss_pred cCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
.+.+ +. +..+.+|||+.++-..
T Consensus 225 ~~~i-~~-----~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 225 SMIL-NQ-----TVLSSMTPKTLILDLA 246 (300)
T ss_dssp SCCB-CH-----HHHTTSCTTCEEEECS
T ss_pred hhhh-CH-----HHHHhCCCCCEEEEEe
Confidence 5433 22 2457789998765543
No 468
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=78.47 E-value=2.1 Score=49.88 Aligned_cols=97 Identities=15% Similarity=0.051 Sum_probs=64.7
Q ss_pred CCCEEEEeC--CcccHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcc--CCC-C-C-CCCCcccEE
Q 016981 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD--ALQ-Q-P-FPDGQFDLV 230 (379)
Q Consensus 158 ~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~~~-~-~-~~~~~fD~V 230 (379)
++.+||=.| .|.|..+..+++..|++|++++.++...+.+++.+...+. ..+ +-..+ +.+ . . .....+|+|
T Consensus 1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga-~~v-~~~~~~~~~~~i~~~t~g~GvDvV 1744 (2512)
T 2vz8_A 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDE-TCF-ANSRDTSFEQHVLRHTAGKGVDLV 1744 (2512)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCS-TTE-EESSSSHHHHHHHHTTTSCCEEEE
T ss_pred CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCc-eEE-ecCCCHHHHHHHHHhcCCCCceEE
Confidence 589999986 4678889999998899999999999888777764322222 111 11111 100 0 1 112459999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+-.. . ...+....++|+|||+++...
T Consensus 1745 ld~~-----g--~~~l~~~l~~L~~~Gr~V~iG 1770 (2512)
T 2vz8_A 1745 LNSL-----A--EEKLQASVRCLAQHGRFLEIG 1770 (2512)
T ss_dssp EECC-----C--HHHHHHHHTTEEEEEEEEECC
T ss_pred EECC-----C--chHHHHHHHhcCCCcEEEEee
Confidence 8532 1 466899999999999988764
No 469
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.26 E-value=11 Score=32.82 Aligned_cols=99 Identities=17% Similarity=0.166 Sum_probs=60.5
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.++..++.+.+.+ ..++.++.+|+.+.. +. -+
T Consensus 6 ~k~vlITGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAASG-IGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 677888886554 444444433 889999999987665543322 246888899987642 10 14
Q ss_pred cccEEEeccccCCCC-----CH--------------HHHHHHHHHhcCCCCEEEEEe
Q 016981 226 QFDLVWSMESGEHMP-----DK--------------SKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 226 ~fD~V~~~~~l~~~~-----~~--------------~~~l~~~~r~LkpgG~l~i~~ 263 (379)
..|+++.+-...... +. ..+++.+...++.+|+++...
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 136 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG 136 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 689999876554321 11 123444555565578877765
No 470
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.21 E-value=9.5 Score=33.00 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=55.4
Q ss_pred CCCEEEEeCC-cccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----C
Q 016981 158 RPKNVVDVGC-GIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (379)
Q Consensus 158 ~~~~vLDiGc-GtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 223 (379)
.+++||=.|+ |.|. ++..|+++ |.+|+.+|.+...++.+.+.+...+ ..++.++.+|+.+.. + .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3678898887 5554 34445554 8899999999988887777765543 257999999997742 1 0
Q ss_pred CCcccEEEeccccCC
Q 016981 224 DGQFDLVWSMESGEH 238 (379)
Q Consensus 224 ~~~fD~V~~~~~l~~ 238 (379)
.+..|+++.+-.+..
T Consensus 99 ~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 99 AGRLDVLVNNAGLGG 113 (266)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCCcEEEECCCcCC
Confidence 146899998766543
No 471
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=78.12 E-value=11 Score=32.39 Aligned_cols=78 Identities=13% Similarity=0.010 Sum_probs=53.8
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~-----~-----~~ 224 (379)
++++|=.|++.|. ++..|++. |++|+.++.++..++.+.+.+...... .++.++.+|+.+.. + .-
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 6788888877654 33444444 889999999998888777766554222 46888999987742 1 01
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+..|+++.+-.+.
T Consensus 86 g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 86 GAVDILVNAAAMF 98 (250)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789999876553
No 472
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=78.00 E-value=9.8 Score=32.45 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=51.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
+++||=.|+ +|.++..+++.+ |.+|+++|.++..++...+.+...+ .++.++.+|+.+.. +. .+
T Consensus 11 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 11 GKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 667887774 566666666554 7899999999887766655555443 46888899987632 10 13
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
.+|+|+.+-...
T Consensus 88 ~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 88 KVDILVNNAGGG 99 (255)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998765543
No 473
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=77.74 E-value=8.3 Score=33.65 Aligned_cols=77 Identities=17% Similarity=0.082 Sum_probs=53.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.|. +..+++.+ |.+|+.++.++..++.+.+.+...+ .++.++.+|+.+.. + .-+
T Consensus 4 ~k~~lVTGas~GI-G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASGGI-GEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5678888876553 44444433 8899999999988888777776654 46888889987642 0 014
Q ss_pred cccEEEeccccCC
Q 016981 226 QFDLVWSMESGEH 238 (379)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (379)
..|+++.+-.+..
T Consensus 81 ~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 81 RIDVLVNNAGVMP 93 (264)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998765543
No 474
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=77.38 E-value=22 Score=29.80 Aligned_cols=78 Identities=17% Similarity=0.065 Sum_probs=52.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEEEccCCCCC-----CC-----C
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAA-ARGLADKVSFQVGDALQQP-----FP-----D 224 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~i~~~~~d~~~~~-----~~-----~ 224 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.+...++.+.+.+. ..+ .++.++.+|+.+.. +. -
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 467787786544 445554444 7899999999887777665554 333 47889999987642 11 1
Q ss_pred CcccEEEeccccCCC
Q 016981 225 GQFDLVWSMESGEHM 239 (379)
Q Consensus 225 ~~fD~V~~~~~l~~~ 239 (379)
+..|+++.+-.+.+.
T Consensus 79 g~id~li~~Ag~~~~ 93 (235)
T 3l77_A 79 GDVDVVVANAGLGYF 93 (235)
T ss_dssp SSCSEEEECCCCCCC
T ss_pred CCCCEEEECCccccc
Confidence 368999987665443
No 475
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=77.15 E-value=14 Score=35.32 Aligned_cols=96 Identities=24% Similarity=0.279 Sum_probs=57.4
Q ss_pred CCEEEEeCCcc-c-HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-------cC------C-CCCeEEEEccCCCCCC
Q 016981 159 PKNVVDVGCGI-G-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAA-------RG------L-ADKVSFQVGDALQQPF 222 (379)
Q Consensus 159 ~~~vLDiGcGt-G-~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~-------~~------~-~~~i~~~~~d~~~~~~ 222 (379)
-.+|.-||+|+ | .++..++.. |..|+++|.++..++.+++.... .+ . .....+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~--- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE--- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---
Confidence 46799999986 3 234445543 78999999999988877664321 01 0 011222 334322
Q ss_pred CCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEE
Q 016981 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIII 261 (379)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i 261 (379)
-...|+|+..- .....-...+++++...++||..++.
T Consensus 112 -~~~aDlVIeaV-pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 -LSTVDLVVEAV-FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GTTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HCCCCEEEEcC-CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 13579888643 12111126788889999988876543
No 476
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=77.14 E-value=8.8 Score=30.71 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE
Q 016981 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQ 213 (379)
Q Consensus 135 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~ 213 (379)
..++...++........- ..-|||+|-|+|+.=.+|.+.+ +.+++.+|-.-..-. ...|+.-.++
T Consensus 23 ltaQR~~L~~a~~~v~~~------~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp--------~~~P~~e~~i 88 (174)
T 3iht_A 23 MVSQRACLEHAIAQTAGL------SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHP--------DSTPPEAQLI 88 (174)
T ss_dssp HHHHHHHHHHHHHHTTTC------CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCG--------GGCCCGGGEE
T ss_pred HHHHHHHHHHHHHHhcCC------CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCC--------CCCCchHhee
Confidence 345555666666654422 5679999999999999999988 778999985211100 1134556677
Q ss_pred EccCCCC-CC----CCCcccEEEeccccCCCCCHH-----HHHHHHHHhcCCCCEEEEEe
Q 016981 214 VGDALQQ-PF----PDGQFDLVWSMESGEHMPDKS-----KFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 214 ~~d~~~~-~~----~~~~fD~V~~~~~l~~~~~~~-----~~l~~~~r~LkpgG~l~i~~ 263 (379)
.+|+.+. +. -....-++++-...++ ++.. .+-.-+..+|.|||.++-..
T Consensus 89 lGdi~~tL~~~~~r~g~~a~LaHaD~G~g~-~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 89 LGDIRETLPATLERFGATASLVHADLGGHN-REKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp ESCHHHHHHHHHHHHCSCEEEEEECCCCSC-HHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cccHHHHHHHHHHhcCCceEEEEeecCCCC-cchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 7777653 21 1233444544433333 2221 22334678999999877654
No 477
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=76.88 E-value=9.3 Score=33.49 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=53.3
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.++..++.+.+.+...+ .++.++.+|+.+.. + .-+
T Consensus 24 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 678888887655 344444433 8899999999988887777766544 47899999987642 1 014
Q ss_pred cccEEEeccccCC
Q 016981 226 QFDLVWSMESGEH 238 (379)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (379)
..|+++.+-.+..
T Consensus 101 ~id~lv~nAg~~~ 113 (279)
T 3sju_A 101 PIGILVNSAGRNG 113 (279)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 6899998765543
No 478
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.83 E-value=12 Score=31.10 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=57.8
Q ss_pred EEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-CCCcccEEEecccc
Q 016981 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESG 236 (379)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~~~l 236 (379)
+||=.| |+|.++..+++.+ |.+|++++-++..+... ...++.++.+|+.+... .-+.+|+|+.....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 577676 4566666666554 78999999988655422 12478999999877531 11458999877655
Q ss_pred CCCCC----HHHHHHHHHHhcCC-CCEEEEEe
Q 016981 237 EHMPD----KSKFVSELARVTAP-AGTIIIVT 263 (379)
Q Consensus 237 ~~~~~----~~~~l~~~~r~Lkp-gG~l~i~~ 263 (379)
.+-+. .......+.+.++. |+++++..
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 32211 13344555565554 46666653
No 479
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=76.77 E-value=12 Score=32.51 Aligned_cols=78 Identities=14% Similarity=0.001 Sum_probs=53.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.|. +..+++.+ |++|+.+|.++..++.+.+.+.......++.++.+|+.+.. + .-+
T Consensus 8 ~k~~lVTGas~GI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 8 EAVAVVTGGSSGI-GLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TCEEEEETCSSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 6788888877653 44444333 88999999999888877776655222235889999987742 0 014
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-.+.
T Consensus 87 ~id~lvnnAg~~ 98 (265)
T 3lf2_A 87 CASILVNNAGQG 98 (265)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876554
No 480
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.56 E-value=18 Score=34.68 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=57.3
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEeCCcccHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc
Q 016981 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK---FGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG 215 (379)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~ 215 (379)
...++.+.+..+.. ..+++|+=+|+| ..+..+++. .|++|+++|.++.....+.. .+ .. ..
T Consensus 249 ~sl~dgi~r~tg~~----L~GKtVvVtGaG--gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~----~g----~d--v~ 312 (488)
T 3ond_A 249 HSLPDGLMRATDVM----IAGKVAVVAGYG--DVGKGCAAALKQAGARVIVTEIDPICALQATM----EG----LQ--VL 312 (488)
T ss_dssp HHHHHHHHHHHCCC----CTTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CE--EC
T ss_pred HHHHHHHHHHcCCc----ccCCEEEEECCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----hC----Cc--cC
Confidence 34445444444432 138899999988 344444333 38999999999876655443 12 21 22
Q ss_pred cCCCCCCCCCcccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 216 DALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 216 d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+..+. ....|+|+....-.++-+ .+..+.+|+|+.++-..
T Consensus 313 ~lee~---~~~aDvVi~atG~~~vl~-----~e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 313 TLEDV---VSEADIFVTTTGNKDIIM-----LDHMKKMKNNAIVCNIG 352 (488)
T ss_dssp CGGGT---TTTCSEEEECSSCSCSBC-----HHHHTTSCTTEEEEESS
T ss_pred CHHHH---HHhcCEEEeCCCChhhhh-----HHHHHhcCCCeEEEEcC
Confidence 33222 245898876433223211 23567789998776544
No 481
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=76.20 E-value=2.6 Score=36.84 Aligned_cols=100 Identities=18% Similarity=0.121 Sum_probs=61.3
Q ss_pred CCEEEEeCC-cccHHHHHHHHHc---CCEEEEEeCCHHH-HHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----
Q 016981 159 PKNVVDVGC-GIGGSSRYLAKKF---GAKCQGITLSPVQ-AQRANALAAARGLADKVSFQVGDALQQP-----FP----- 223 (379)
Q Consensus 159 ~~~vLDiGc-GtG~~~~~l~~~~---~~~v~gvD~s~~~-~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 223 (379)
++++|=.|+ |+|.++..+++.+ |.+|+.+|.++.. ++...+ . +..++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---R--LPAKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---T--SSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---h--cCCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 678999998 3666666666554 7899999987643 232221 1 2246778889987632 10
Q ss_pred CC---cccEEEeccccCC--------CC--CH---H-----------HHHHHHHHhcCCCCEEEEEe
Q 016981 224 DG---QFDLVWSMESGEH--------MP--DK---S-----------KFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 224 ~~---~fD~V~~~~~l~~--------~~--~~---~-----------~~l~~~~r~LkpgG~l~i~~ 263 (379)
-+ .+|+++.+-.+.. +. +. . .+++.+.+.++++|.++...
T Consensus 82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 12 7899997765433 11 11 1 23455566667778887765
No 482
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=75.78 E-value=24 Score=29.04 Aligned_cols=93 Identities=10% Similarity=0.126 Sum_probs=55.7
Q ss_pred EEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCC-CCCcccEEEecccc
Q 016981 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESG 236 (379)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~V~~~~~l 236 (379)
+||=.| |+|.++..+++.+ |.+|++++-++..+.... +++.++.+|+.+... .-..+|+|+.....
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 577666 4566666665544 789999999876543211 468899999876531 11358999876554
Q ss_pred CCC--CCHHHHHHHHHHhcCC--CCEEEEEe
Q 016981 237 EHM--PDKSKFVSELARVTAP--AGTIIIVT 263 (379)
Q Consensus 237 ~~~--~~~~~~l~~~~r~Lkp--gG~l~i~~ 263 (379)
..- .........+.+.++. .+++++..
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 321 1223444555555554 35666654
No 483
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=75.67 E-value=8.5 Score=35.86 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=55.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---C-CEEEEEeCCHHHHHHHHHHHHHcC--CCCCeEEEEccCCCCC-----CCCCcc
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---G-AKCQGITLSPVQAQRANALAAARG--LADKVSFQVGDALQQP-----FPDGQF 227 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~-----~~~~~f 227 (379)
+++||=.|+ +|..+..+++++ | .+|+++|.++..+....+.+.... .+.++.++.+|+.+.. +....+
T Consensus 35 ~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 678888874 566777766655 6 699999999987766555544321 1247889999987742 223578
Q ss_pred cEEEeccccCCC
Q 016981 228 DLVWSMESGEHM 239 (379)
Q Consensus 228 D~V~~~~~l~~~ 239 (379)
|+|+......|.
T Consensus 114 D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 114 DYVLNLSALKHV 125 (399)
T ss_dssp SEEEECCCCCCG
T ss_pred CEEEECCCcCCC
Confidence 999977666554
No 484
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=75.39 E-value=7.7 Score=33.86 Aligned_cols=76 Identities=16% Similarity=0.081 Sum_probs=46.2
Q ss_pred CCEEEEeCCc-ccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCG-IGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcG-tG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
+++||=.|++ +|.++..+++.+ |.+|+.++.++...+.+++.....+ ++.++.+|+.+.. + .-
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6789989876 245555555544 7899999987652122222222222 3678889987632 0 12
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+..|+++.+-.+.
T Consensus 83 g~id~lv~nAg~~ 95 (275)
T 2pd4_A 83 GSLDFIVHSVAFA 95 (275)
T ss_dssp SCEEEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 4689998876543
No 485
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=75.13 E-value=6.9 Score=35.84 Aligned_cols=90 Identities=18% Similarity=0.178 Sum_probs=59.5
Q ss_pred CCCEEEEeCCc-ccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC------CCC-CCccc
Q 016981 158 RPKNVVDVGCG-IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFP-DGQFD 228 (379)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~------~~~-~~~fD 228 (379)
++.+||=+|+| .|..+..+++.. |++|+++|.++.-++.+++ .|. . .++ |..+. ... ...+|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~vi--~~~~~~~~~v~~~~~g~g~D 256 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGA--D-HVV--DARRDPVKQVMELTRGRGVN 256 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTC--S-EEE--ETTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCC--C-EEE--eccchHHHHHHHHhCCCCCc
Confidence 38999999976 466788888888 8999999999988887764 332 1 122 22111 011 23699
Q ss_pred EEEeccccCCCCCHHH--HHHHHHHhcCCCCEEEEEec
Q 016981 229 LVWSMESGEHMPDKSK--FVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~--~l~~~~r~LkpgG~l~i~~~ 264 (379)
+|+-.- .. .. .+..+.+. +||++++...
T Consensus 257 vvid~~-----G~-~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 257 VAMDFV-----GS-QATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp EEEESS-----CC-HHHHHHGGGGEE--EEEEEEECCC
T ss_pred EEEECC-----CC-chHHHHHHHhhc--CCCEEEEEeC
Confidence 998532 22 22 56666666 9999888764
No 486
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=74.96 E-value=21 Score=31.13 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=46.0
Q ss_pred CCEEEEeCCcc-cHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CC
Q 016981 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (379)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 224 (379)
+++||=.|+++ |.++..+++.+ |.+|+.++.++...+.+++.....+ ++.++.+|+.+.. + .-
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899888762 45555555444 8899999988742222222222222 3678888987632 1 01
Q ss_pred CcccEEEeccccC
Q 016981 225 GQFDLVWSMESGE 237 (379)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (379)
+..|+++.+-.+.
T Consensus 98 g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 98 GSLDIIVHSIAYA 110 (285)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999876543
No 487
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=74.92 E-value=3.8 Score=39.21 Aligned_cols=65 Identities=11% Similarity=0.104 Sum_probs=47.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC----CCCCcccEEE
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~V~ 231 (379)
.++|+=+||| .++..+++.+ +..|+.+|.++..++.+...+ .+..+.+|..+.. ..-+..|+++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 6788877775 5677777766 668999999999988776543 4678899987742 1225678887
Q ss_pred e
Q 016981 232 S 232 (379)
Q Consensus 232 ~ 232 (379)
+
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 6
No 488
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=74.86 E-value=7.6 Score=33.55 Aligned_cols=76 Identities=17% Similarity=0.171 Sum_probs=52.2
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. + ..+
T Consensus 6 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 677888886654 444444433 8899999999988887776664433 47889999987642 1 014
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-...
T Consensus 83 ~id~lv~nAg~~ 94 (257)
T 3imf_A 83 RIDILINNAAGN 94 (257)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999776543
No 489
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=74.83 E-value=3.3 Score=37.90 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=52.8
Q ss_pred CCCEEEEeCC--cccHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCC-----CCCCCcccE
Q 016981 158 RPKNVVDVGC--GIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDL 229 (379)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~ 229 (379)
++.+||=.|+ |.|..+..+++.. +.+|++++ ++...+.++ .|. -.++. +-.+. ....+.+|+
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga---~~~~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSV---THLFD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGS---SEEEE-TTSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCC---cEEEc-CCccHHHHHHHhcCCCceE
Confidence 4899999998 3577888888876 57899998 554444433 232 11222 11111 012357999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEec
Q 016981 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (379)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 264 (379)
|+-.-.- ..+..+.++|++||++++...
T Consensus 212 v~d~~g~-------~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 212 VLDCLCG-------DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp EEEECC--------------CTTEEEEEEEEEEC-
T ss_pred EEECCCc-------hhHHHHHHHhhcCCEEEEECC
Confidence 9853221 123678899999999998764
No 490
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=74.37 E-value=19 Score=33.93 Aligned_cols=87 Identities=15% Similarity=0.135 Sum_probs=51.2
Q ss_pred CCCEEEEeCCcc-cHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCCCCCCcccEEEecccc
Q 016981 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (379)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (379)
.+++|.=+|.|. |.-....++.+|.+|+++|.++.....+.. .| ..+ .++.+. -...|+|+....-
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~----~G----~~~--~sL~ea---l~~ADVVilt~gt 276 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM----EG----YQV--LLVEDV---VEEAHIFVTTTGN 276 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---TTTCSEEEECSSC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH----hC----Cee--cCHHHH---HhhCCEEEECCCC
Confidence 488999999875 444444444558999999999865544432 12 222 233222 1347888864333
Q ss_pred CCCCCHHHHHHHHHHhcCCCCEEEEE
Q 016981 237 EHMPDKSKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~i~ 262 (379)
.++-+ .+..+.+|||+.++-.
T Consensus 277 ~~iI~-----~e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 277 DDIIT-----SEHFPRMRDDAIVCNI 297 (436)
T ss_dssp SCSBC-----TTTGGGCCTTEEEEEC
T ss_pred cCccC-----HHHHhhcCCCcEEEEe
Confidence 33312 2346778999766543
No 491
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=74.35 E-value=15 Score=31.76 Aligned_cols=78 Identities=22% Similarity=0.208 Sum_probs=51.4
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.++..++.+.+.+.......++.++.+|+.+.. + .-+
T Consensus 13 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGGGSG-LGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 678888886554 444444433 88999999998877766555544311246888999987642 1 013
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-.+.
T Consensus 92 ~id~lv~nAg~~ 103 (267)
T 1iy8_A 92 RIDGFFNNAGIE 103 (267)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999876543
No 492
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=74.23 E-value=16 Score=31.29 Aligned_cols=76 Identities=17% Similarity=0.099 Sum_probs=51.8
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
++++|=.|++.| ++..+++.+ |.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 7 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 678888886654 444444433 8899999999887777666665543 46888999987632 10 14
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
..|+++.+-.+.
T Consensus 84 ~id~lv~nAg~~ 95 (247)
T 2jah_A 84 GLDILVNNAGIM 95 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776543
No 493
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=73.91 E-value=11 Score=33.08 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=52.1
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
++++|=.|++.|. +..+++.+ |++|+.+|.+...++.+.+.+...+ .++.++.+|+.+.. + .-+
T Consensus 28 ~k~~lVTGas~GI-G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 28 SPVALITGAGSGI-GRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCEEEEESCSSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6788888876654 44444433 8899999999988877766665433 47889999987642 1 014
Q ss_pred cccEEEecccc
Q 016981 226 QFDLVWSMESG 236 (379)
Q Consensus 226 ~fD~V~~~~~l 236 (379)
..|+++.+-.+
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999977655
No 494
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=73.82 E-value=13 Score=32.62 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=49.6
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----CC-----CC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 225 (379)
+++||=.|++ |.++..+++.+ |.+|++++-++..++...+.+...+. .++.++.+|+.+.. +. -+
T Consensus 28 ~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 6788877765 44555555443 78999999999877766665554432 36888999987632 10 14
Q ss_pred cccEEEec
Q 016981 226 QFDLVWSM 233 (379)
Q Consensus 226 ~fD~V~~~ 233 (379)
.+|+++.+
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68999876
No 495
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=73.51 E-value=9.9 Score=34.18 Aligned_cols=92 Identities=22% Similarity=0.202 Sum_probs=55.0
Q ss_pred CCEEEEeCCcc-c-HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCeEEE-----EccCCCCCCCCCccc
Q 016981 159 PKNVVDVGCGI-G-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA---DKVSFQ-----VGDALQQPFPDGQFD 228 (379)
Q Consensus 159 ~~~vLDiGcGt-G-~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~i~~~-----~~d~~~~~~~~~~fD 228 (379)
..+|.=||+|. | .++..|++. |.+|+.+ .++..++..++. |+. +...+. ..|... ...+|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~~~~~~~i~~~----g~~~~~~~~~~~~~~~~~~~~~~----~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-GHEVILI-ARPQHVQAIEAT----GLRLETQSFDEQVKVSASSDPSA----VQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CCHHHHHHHHHH----CEEEECSSCEEEECCEEESCGGG----GTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-CCeEEEE-EcHhHHHHHHhC----CeEEEcCCCcEEEeeeeeCCHHH----cCCCC
Confidence 67899999885 2 344555554 7799999 888777766542 210 011110 111111 24689
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEEe
Q 016981 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (379)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~~ 263 (379)
+|+..---. +...+++++...++|+..++...
T Consensus 89 ~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 89 LVLFCVKST---DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EEEECCCGG---GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEEEcccc---cHHHHHHHHHHhcCCCCEEEEeC
Confidence 988653222 34788899999999987665543
No 496
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=73.30 E-value=16 Score=32.21 Aligned_cols=91 Identities=12% Similarity=0.179 Sum_probs=52.0
Q ss_pred CEEEEeCCcc-c-HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE--------c---cCCCCCCCCCc
Q 016981 160 KNVVDVGCGI-G-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV--------G---DALQQPFPDGQ 226 (379)
Q Consensus 160 ~~vLDiGcGt-G-~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~--------~---d~~~~~~~~~~ 226 (379)
++|.=||+|. | .++..|++. |.+|+++|.++..++..++. + +.... . +..+..-.-..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~----g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWPAHIEAIRKN----G----LIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH----C----EEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhC----C----EEEEeCCCeeEecceeecchhhcccCCC
Confidence 5788899874 2 233444443 67999999998877665542 2 11111 0 11111000126
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCCEEEEE
Q 016981 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (379)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~i~ 262 (379)
.|+|+..---. ....+++++...++|+..++..
T Consensus 75 ~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 75 VDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 89888653221 2367788888888887765543
No 497
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=73.19 E-value=6.6 Score=41.36 Aligned_cols=54 Identities=20% Similarity=0.116 Sum_probs=41.4
Q ss_pred CCCCEEEEeCCcccHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccC
Q 016981 157 KRPKNVVDVGCGIGGSSRYLAKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (379)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 217 (379)
....+++|+=||.|.++.-+... |. .+.++|+++.+.+.-+.++ ++..++..|+
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~------p~~~~~~~DI 593 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN------PGSTVFTEDC 593 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC------TTSEEECSCH
T ss_pred CCCCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC------CCCccccccH
Confidence 34679999999999999988876 54 5779999999988776654 2455565554
No 498
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=73.06 E-value=15 Score=32.20 Aligned_cols=76 Identities=16% Similarity=0.193 Sum_probs=51.6
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHHHHcCCCCCeEEEEccCCC
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITLS----------------PVQAQRANALAAARGLADKVSFQVGDALQ 219 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~s----------------~~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 219 (379)
++++|=.|++.|. ++..|++. |++|+.+|.+ ...++...+.+...+ .++.++.+|+.+
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 87 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDVRD 87 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCCCC
Confidence 6788888887664 33444443 8999999987 666666655555443 478899999876
Q ss_pred CC-----C-----CCCcccEEEeccccC
Q 016981 220 QP-----F-----PDGQFDLVWSMESGE 237 (379)
Q Consensus 220 ~~-----~-----~~~~fD~V~~~~~l~ 237 (379)
.. + .-+..|+++.+-.+.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 42 0 014689999876653
No 499
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.99 E-value=15 Score=32.07 Aligned_cols=77 Identities=21% Similarity=0.215 Sum_probs=52.6
Q ss_pred CCEEEEeCCcccH---HHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-
Q 016981 159 PKNVVDVGCGIGG---SSRYLAKKFGAKCQGITL-------------SPVQAQRANALAAARGLADKVSFQVGDALQQP- 221 (379)
Q Consensus 159 ~~~vLDiGcGtG~---~~~~l~~~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 221 (379)
++++|=.|++.|. ++..|+++ |++|+.+|. ++..++.+.+.+...+ .++.++.+|+.+..
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAE-GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDAA 91 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHH
Confidence 6788888877654 23344443 889999998 6777777666665544 47889999987642
Q ss_pred ----C-----CCCcccEEEeccccCC
Q 016981 222 ----F-----PDGQFDLVWSMESGEH 238 (379)
Q Consensus 222 ----~-----~~~~fD~V~~~~~l~~ 238 (379)
+ .-+..|+++.+-....
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 0147899998766543
No 500
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=72.94 E-value=16 Score=31.83 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=51.7
Q ss_pred CCEEEEeCCcccHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEccCCCCC-----C-----CCC
Q 016981 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (379)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 225 (379)
+++||=.|++.| ++..+++.+ |.+|+.++.++..++.+.+.+...+ .++.++.+|+.+.. + .-+
T Consensus 22 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 678888887654 444444443 7899999999887776666565444 46888999987632 1 014
Q ss_pred cccEEEeccccC
Q 016981 226 QFDLVWSMESGE 237 (379)
Q Consensus 226 ~fD~V~~~~~l~ 237 (379)
.+|+++.+-.+.
T Consensus 99 ~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 99 PVDVLVNNAGRP 110 (277)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999776543
Done!