Your job contains 1 sequence.
>016982
MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGI
DWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDI
KEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG
SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD
GKIVTWDLESQEDLLNYHL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016982
(379 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2052871 - symbol:ARPC1A "AT2G30910" species:37... 1609 2.3e-165 1
TAIR|locus:2042491 - symbol:ARPC1B "AT2G31300" species:37... 1603 1.0e-164 1
DICTYBASE|DDB_G0277825 - symbol:arcA "actin related prote... 850 6.2e-85 1
MGI|MGI:1343142 - symbol:Arpc1b "actin related protein 2/... 769 2.4e-76 1
RGD|2155 - symbol:Arpc1b "actin related protein 2/3 compl... 763 1.0e-75 1
UNIPROTKB|O88656 - symbol:Arpc1b "Actin-related protein 2... 763 1.0e-75 1
ZFIN|ZDB-GENE-030131-7414 - symbol:arpc1b "actin related ... 762 1.3e-75 1
UNIPROTKB|E2RMT4 - symbol:ARPC1B "Uncharacterized protein... 761 1.7e-75 1
UNIPROTKB|O15143 - symbol:ARPC1B "Actin-related protein 2... 760 2.1e-75 1
MGI|MGI:1928896 - symbol:Arpc1a "actin related protein 2/... 760 2.1e-75 1
RGD|620834 - symbol:Arpc1a "actin related protein 2/3 com... 755 7.3e-75 1
UNIPROTKB|Q5ZJI7 - symbol:ARPC1A "Uncharacterized protein... 754 9.3e-75 1
UNIPROTKB|E2QYP4 - symbol:ARPC1A "Uncharacterized protein... 754 9.3e-75 1
UNIPROTKB|F1PT97 - symbol:ARPC1A "Uncharacterized protein... 754 9.3e-75 1
UNIPROTKB|Q92747 - symbol:ARPC1A "Actin-related protein 2... 754 9.3e-75 1
UNIPROTKB|F1REX9 - symbol:ARPC1A "Uncharacterized protein... 753 1.2e-74 1
UNIPROTKB|Q1JP79 - symbol:ARPC1A "Actin-related protein 2... 752 1.5e-74 1
ZFIN|ZDB-GENE-040116-1 - symbol:arpc1a "actin related pro... 744 1.1e-73 1
UNIPROTKB|Q58CQ2 - symbol:ARPC1B "Actin-related protein 2... 743 1.4e-73 1
ZFIN|ZDB-GENE-040625-80 - symbol:zgc:86896 "zgc:86896" sp... 736 7.5e-73 1
WB|WBGene00000201 - symbol:arx-3 species:6239 "Caenorhabd... 693 2.7e-68 1
UNIPROTKB|E9PF58 - symbol:ARPC1A "Actin-related protein 2... 649 1.2e-63 1
UNIPROTKB|F1PWL8 - symbol:F1PWL8 "Uncharacterized protein... 642 6.9e-63 1
ASPGD|ASPL0000031126 - symbol:AN5778 species:162425 "Emer... 640 1.1e-62 1
FB|FBgn0001961 - symbol:Arpc1 "Actin-related protein 2/3 ... 639 1.4e-62 1
UNIPROTKB|F1RNS7 - symbol:ARPC1B "Uncharacterized protein... 613 8.1e-60 1
UNIPROTKB|D4A992 - symbol:D4A992 "Uncharacterized protein... 609 2.2e-59 1
UNIPROTKB|B4DLQ7 - symbol:ARPC1A "cDNA FLJ57124, highly s... 601 1.5e-58 1
UNIPROTKB|F8WCG3 - symbol:ARPC1B "Actin-related protein 2... 598 3.2e-58 1
POMBASE|SPBC14C8.06 - symbol:arc1 "ARP2/3 actin-organizin... 588 3.6e-57 1
UNIPROTKB|G4MYZ4 - symbol:MGG_04352 "Uncharacterized prot... 581 2.0e-56 1
CGD|CAL0002151 - symbol:ARC40 species:5476 "Candida albic... 576 6.8e-56 1
UNIPROTKB|Q59V79 - symbol:ARC40 "Putative uncharacterized... 576 6.8e-56 1
UNIPROTKB|H9KZ89 - symbol:ARPC1B "Uncharacterized protein... 564 1.3e-54 1
SGD|S000000438 - symbol:ARC40 "Subunit of the ARP2/3 comp... 528 8.3e-51 1
UNIPROTKB|C9J6C8 - symbol:ARPC1B "Actin-related protein 2... 461 1.0e-43 1
UNIPROTKB|C9JFG9 - symbol:ARPC1B "Actin-related protein 2... 461 1.0e-43 1
UNIPROTKB|C9JQM8 - symbol:ARPC1B "Actin-related protein 2... 461 1.0e-43 1
UNIPROTKB|C9JEY1 - symbol:ARPC1B "Actin-related protein 2... 435 5.9e-41 1
UNIPROTKB|C9J4Z7 - symbol:ARPC1B "Actin-related protein 2... 428 3.3e-40 1
UNIPROTKB|C9K057 - symbol:ARPC1B "Actin-related protein 2... 344 2.6e-31 1
UNIPROTKB|C9JBJ7 - symbol:ARPC1B "Actin-related protein 2... 319 1.2e-28 1
UNIPROTKB|C9JTT6 - symbol:ARPC1B "Actin-related protein 2... 247 6.5e-21 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 192 8.5e-13 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 190 1.4e-12 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 180 2.4e-11 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 178 4.0e-11 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 178 4.0e-11 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 170 3.1e-10 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 170 3.4e-10 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 169 4.2e-10 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 166 9.6e-10 1
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 167 2.3e-09 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 158 7.7e-09 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 157 9.7e-09 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 156 1.1e-08 1
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 152 3.2e-08 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 146 1.9e-07 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 143 4.1e-07 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 142 5.2e-07 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 142 5.2e-07 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 141 6.8e-07 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 140 8.9e-07 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 140 8.9e-07 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 140 8.9e-07 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 140 9.0e-07 1
UNIPROTKB|E1BVC4 - symbol:SEC13 "Uncharacterized protein"... 139 1.0e-06 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 139 1.1e-06 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 139 1.1e-06 1
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 137 2.2e-06 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 136 2.6e-06 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 136 2.8e-06 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 139 3.2e-06 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 134 4.1e-06 1
UNIPROTKB|F1PDM3 - symbol:SEC13 "Uncharacterized protein"... 132 6.5e-06 1
WB|WBGene00012479 - symbol:Y18D10A.9 species:6239 "Caenor... 131 9.3e-06 1
UNIPROTKB|Q9XW12 - symbol:Y18D10A.9 "Probable cytosolic i... 131 9.3e-06 1
ASPGD|ASPL0000060163 - symbol:AN1385 species:162425 "Emer... 132 1.2e-05 1
UNIPROTKB|Q2KJH4 - symbol:WDR1 "WD repeat-containing prot... 126 1.7e-05 2
MGI|MGI:1337100 - symbol:Wdr1 "WD repeat domain 1" specie... 123 1.8e-05 2
UNIPROTKB|P55735 - symbol:SEC13 "Protein SEC13 homolog" s... 128 1.8e-05 1
MGI|MGI:99832 - symbol:Sec13 "SEC13 homolog (S. cerevisia... 127 2.4e-05 1
RGD|1359555 - symbol:Sec13 "SEC13 homolog (S. cerevisiae)... 127 2.4e-05 1
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 126 3.3e-05 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 126 3.4e-05 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 124 5.5e-05 1
SGD|S000004198 - symbol:SEC13 "Structural component of 3 ... 123 5.6e-05 1
FB|FBgn0024509 - symbol:Sec13 "Sec13 ortholog (S. cerevis... 125 5.7e-05 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 123 6.1e-05 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 123 7.1e-05 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 123 7.2e-05 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 123 7.2e-05 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 123 7.2e-05 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 123 7.2e-05 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 123 7.2e-05 1
RGD|1305789 - symbol:Wdr1 "WD repeat domain 1" species:10... 120 7.7e-05 2
CGD|CAL0001184 - symbol:orf19.4395 species:5476 "Candida ... 130 8.3e-05 2
UNIPROTKB|O75083 - symbol:WDR1 "WD repeat-containing prot... 121 9.5e-05 2
ZFIN|ZDB-GENE-070112-342 - symbol:gnb5a "guanine nucleoti... 122 0.00011 1
WB|WBGene00000484 - symbol:che-2 species:6239 "Caenorhabd... 126 0.00012 1
WARNING: Descriptions of 23 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2052871 [details] [associations]
symbol:ARPC1A "AT2G30910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0007015 "actin filament organization"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005885
"Arp2/3 protein complex" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC004669 HOGENOM:HOG000181752
KO:K05757 GO:GO:0030833 PANTHER:PTHR10709 GO:GO:0005885 OMA:FQTLCGD
EMBL:BT004616 EMBL:AK227543 IPI:IPI00516797 PIR:B84714
RefSeq:NP_001189645.1 RefSeq:NP_180648.1 UniGene:At.48535
UniGene:At.71148 ProteinModelPortal:O80856 SMR:O80856 STRING:O80856
PaxDb:O80856 EnsemblPlants:AT2G30910.1 EnsemblPlants:AT2G30910.3
GeneID:817641 KEGG:ath:AT2G30910 TAIR:At2g30910 InParanoid:O80856
PhylomeDB:O80856 ProtClustDB:CLSN2683126 ArrayExpress:O80856
Genevestigator:O80856 Uniprot:O80856
Length = 378
Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
Identities = 298/377 (79%), Positives = 332/377 (88%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYK-LIQEKWEKLHVLQKHDQIVSG 59
MA + VH+FA+ ITCHAWSPD +MVA CPNN EVHIYK L Q+ WE+LHVLQKHDQIVSG
Sbjct: 1 MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
IDWS +SN+IVTVSHDRNSYVW+ EG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61 IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179
KTVCICYYEQENNWWVSKLIRKRH+SSVTSVAWHPNNV LATTSTDGKCRVFSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180
Query: 180 IKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL 239
K+ K G+ ++TKFGEQILQLDLS+SWAFGVKWSPSGNTLAYVGH+SMIYFVDDVGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240
Query: 240 AQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKY 299
AQ+VAFRDLPLRDVLF+SEKMVIGVG+D NPMVFA+D+TGIW+FI+++ E+K +SS Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300
Query: 300 GSQFSEAFGKLYG-QSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG 358
SQFSEAFGK YG QSK NDA ES RGG H NCIN IV L +AGS ++ RF+TSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSG 357
Query: 359 LDGKIVTWDLESQEDLL 375
LDGK+ WDLE+ E L
Sbjct: 358 LDGKVAIWDLENMEQEL 374
>TAIR|locus:2042491 [details] [associations]
symbol:ARPC1B "AT2G31300" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0007015 "actin filament organization"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005885
"Arp2/3 protein complex" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC006593 HOGENOM:HOG000181752
KO:K05757 GO:GO:0030833 PANTHER:PTHR10709 GO:GO:0005885
UniGene:At.48535 UniGene:At.71148 ProtClustDB:CLSN2683126
EMBL:AF439845 EMBL:BT000567 IPI:IPI00517913 PIR:A84719
RefSeq:NP_180688.1 ProteinModelPortal:Q9SJW6 SMR:Q9SJW6
IntAct:Q9SJW6 STRING:Q9SJW6 PRIDE:Q9SJW6 EnsemblPlants:AT2G31300.1
GeneID:817687 KEGG:ath:AT2G31300 TAIR:At2g31300 InParanoid:Q9SJW6
OMA:THENTIT PhylomeDB:Q9SJW6 Genevestigator:Q9SJW6 Uniprot:Q9SJW6
Length = 378
Score = 1603 (569.3 bits), Expect = 1.0e-164, P = 1.0e-164
Identities = 299/379 (78%), Positives = 334/379 (88%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYK-LIQEKWEKLHVLQKHDQIVSG 59
MA + VH+FA+ ITCHAWSPD +MVA CPNN EVHIYK L Q+ WE+LHVLQKHDQIVSG
Sbjct: 1 MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
IDWS +SN+IVTVSHDRNSYVW+ EG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61 IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179
KTVCICYYEQENNWWVSKLIRKRH+SSVTSVAWHPNNV LATTSTDGKCRVFSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180
Query: 180 IKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL 239
K+ K G+ ++TKFGEQILQLDLS+SWAFGVKWSPSGNTLAYVGH+SMIYFVDDVGPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240
Query: 240 AQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKY 299
AQ+VAFRDLPLRDVLF+SEKMVIGVG+D NPMVFAAD+TGIW+FI+++ E+K +SSG Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSY 300
Query: 300 GSQFSEAFGKLYG-QSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG 358
SQFSEAFGK YG QSK NDA +S RGG H N I IVPL + GS ++ RF+TSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASDS---RGGVHDNSITSIVPLGKGGSPKVMRFSTSG 357
Query: 359 LDGKIVTWDLES-QEDLLN 376
LDGKI WDLE+ Q++L N
Sbjct: 358 LDGKIAIWDLENMQQELGN 376
>DICTYBASE|DDB_G0277825 [details] [associations]
symbol:arcA "actin related protein 2/3 complex,
subunit 1" species:44689 "Dictyostelium discoideum" [GO:0030670
"phagocytic vesicle membrane" evidence=IDA] [GO:0006909
"phagocytosis" evidence=IEP] [GO:0006887 "exocytosis" evidence=IEP]
[GO:0005885 "Arp2/3 protein complex" evidence=IDA] [GO:0030864
"cortical actin cytoskeleton" evidence=IC] [GO:0030175 "filopodium"
evidence=IC] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0051015 "actin filament binding" evidence=TAS] [GO:0045010
"actin nucleation" evidence=TAS] [GO:0030041 "actin filament
polymerization" evidence=TAS] [GO:0006928 "cellular component
movement" evidence=TAS] [GO:0031252 "cell leading edge"
evidence=IC] [GO:0031143 "pseudopodium" evidence=IEA;IC]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005938
"cell cortex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005905 "coated pit" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277825 GO:GO:0005829 GO:GO:0031252
GO:GO:0030670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR EMBL:AAFI02000023 eggNOG:COG2319
GO:GO:0006909 GO:GO:0006928 GO:GO:0030175 GO:GO:0031143
GO:GO:0030041 GO:GO:0030864 GO:GO:0006887 GO:GO:0045010 KO:K05757
PANTHER:PTHR10709 GO:GO:0005885 EMBL:AF095930 RefSeq:XP_642137.1
ProteinModelPortal:O96622 STRING:O96622 EnsemblProtists:DDB0214932
GeneID:8621345 KEGG:ddi:DDB_G0277825 OMA:LEPLSCH
ProtClustDB:CLSZ2846836 Uniprot:O96622
Length = 369
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 164/372 (44%), Positives = 233/372 (62%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGI 60
M+A + A CIT HAW+ D + VA CPNNNEVHIY W HVL +HDQ+V+ I
Sbjct: 1 MSAFEIEHLASCITAHAWNADRSRVALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSI 60
Query: 61 DWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
DW+ ++NRI+T S DRN+YVW + +W P LV+LR+NRAA V+WSP+ENKFAV +GAK
Sbjct: 61 DWAPKTNRILTSSQDRNAYVWTFKDGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAK 120
Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDI 180
VCIC++E+E++WW S I+K H S+V V WHPNN+ LAT+S+D K RVF +IK D
Sbjct: 121 LVCICFFEEEHDWWASNHIKK-HKSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADG 179
Query: 181 KEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
+ + FGE + + D SW +KWSPSG+TLAY H+ + + P
Sbjct: 180 RSVTR-PYGEVAFGEPVFEFDQCASWVHALKWSPSGSTLAYSSHDGVFAVANFSTNPPTI 238
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ + R+LPLRD+L+++E + GVG+DC P++ ++ G W + +D K S G G
Sbjct: 239 EKLRVRNLPLRDLLYITENSIAGVGYDCAPLLIT-NQNG-WKYSGEMD--KASEGGAAAG 294
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
S+ S KL+ Q+K +G ++ + + H NCI IVP + G ++ F+TSGLD
Sbjct: 295 SETSAR--KLF-QNKVDLG-ESKSADKKLTTVHQNCITSIVPFKSVGGV-VSDFSTSGLD 349
Query: 361 GKIVTWDLESQE 372
G IV W +++ E
Sbjct: 350 GNIVVWHVKALE 361
>MGI|MGI:1343142 [details] [associations]
symbol:Arpc1b "actin related protein 2/3 complex, subunit
1B" species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=TAS] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1343142 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CH466529 eggNOG:COG2319
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 GO:GO:0005885 CTD:10095 OMA:VLFTYDS
ChiTaRS:ARPC1B EMBL:AF162768 EMBL:AK002274 EMBL:AK005378
EMBL:AK147731 EMBL:AK148145 EMBL:AK159371 EMBL:AK167978
EMBL:AK168774 EMBL:AK172124 EMBL:BC003441 IPI:IPI00125143
RefSeq:NP_075631.2 UniGene:Mm.30010 ProteinModelPortal:Q9WV32
SMR:Q9WV32 IntAct:Q9WV32 STRING:Q9WV32 PhosphoSite:Q9WV32
PaxDb:Q9WV32 PRIDE:Q9WV32 Ensembl:ENSMUST00000085679 GeneID:11867
KEGG:mmu:11867 NextBio:279879 Bgee:Q9WV32 CleanEx:MM_ARPC1B
Genevestigator:Q9WV32 GermOnline:ENSMUSG00000029622 Uniprot:Q9WV32
Length = 372
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 159/374 (42%), Positives = 220/374 (58%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPNNV LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + S W GV +S SG+ +A+V H+S + VD +A
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVDADKKMAVA-T 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIW-TFIKFLDERKTSSSGPKYGS 301
+A LPL V F++E ++ G DC P++F D + +F LD K SS + G
Sbjct: 240 LASETLPLLAVTFITENSLVAAGHDCFPVLFTYDNAAVTLSFGGRLDVPKQSS---QRGM 296
Query: 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361
E F L K + H N ++ I L G ++ ++F T+G+DG
Sbjct: 297 TARERFQNL---DKKASSEGGAATGAGLDSLHKNSVSQISVL-SGGKAKCSQFCTTGMDG 352
Query: 362 KIVTWDLESQEDLL 375
+ WD++S E L
Sbjct: 353 GMSIWDVKSLESAL 366
>RGD|2155 [details] [associations]
symbol:Arpc1b "actin related protein 2/3 complex, subunit 1B"
species:10116 "Rattus norvegicus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2155 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 CTD:10095 EMBL:AF083269 EMBL:BC062027
IPI:IPI00211512 RefSeq:NP_062162.1 UniGene:Rn.2090
ProteinModelPortal:O88656 SMR:O88656 IntAct:O88656 STRING:O88656
PRIDE:O88656 GeneID:54227 KEGG:rno:54227 InParanoid:O88656
NextBio:610652 ArrayExpress:O88656 Genevestigator:O88656
GermOnline:ENSRNOG00000000991 Uniprot:O88656
Length = 372
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 157/374 (41%), Positives = 219/374 (58%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPNNV LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + S W GV +S G+ +A+V H+S + VD +A
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSAGGSRVAWVSHDSTVCLVDAEKKMAVA-T 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET-GIWTFIKFLDERKTSSSGPKYGS 301
+A LPL + F++E ++ G DC P++F D G +F LD K +S + G
Sbjct: 240 LASETLPLLAITFITENSLVAAGHDCFPVLFTYDNAAGTLSFGGRLDVPKQNS---QRGL 296
Query: 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361
E F L K + H N ++ I L G ++ ++F T+G+DG
Sbjct: 297 TARERFQNL---DKKASSEGGAATGAGLDSLHKNSVSQISVL-SGGKAKCSQFCTTGMDG 352
Query: 362 KIVTWDLESQEDLL 375
+ WD++S E L
Sbjct: 353 GMSIWDVKSLESAL 366
>UNIPROTKB|O88656 [details] [associations]
symbol:Arpc1b "Actin-related protein 2/3 complex subunit
1B" species:10116 "Rattus norvegicus" [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:2155 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319
HOGENOM:HOG000181752 HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG
GO:GO:0030833 PANTHER:PTHR10709 CTD:10095 EMBL:AF083269
EMBL:BC062027 IPI:IPI00211512 RefSeq:NP_062162.1 UniGene:Rn.2090
ProteinModelPortal:O88656 SMR:O88656 IntAct:O88656 STRING:O88656
PRIDE:O88656 GeneID:54227 KEGG:rno:54227 InParanoid:O88656
NextBio:610652 ArrayExpress:O88656 Genevestigator:O88656
GermOnline:ENSRNOG00000000991 Uniprot:O88656
Length = 372
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 157/374 (41%), Positives = 219/374 (58%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPNNV LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + S W GV +S G+ +A+V H+S + VD +A
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSAGGSRVAWVSHDSTVCLVDAEKKMAVA-T 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET-GIWTFIKFLDERKTSSSGPKYGS 301
+A LPL + F++E ++ G DC P++F D G +F LD K +S + G
Sbjct: 240 LASETLPLLAITFITENSLVAAGHDCFPVLFTYDNAAGTLSFGGRLDVPKQNS---QRGL 296
Query: 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361
E F L K + H N ++ I L G ++ ++F T+G+DG
Sbjct: 297 TARERFQNL---DKKASSEGGAATGAGLDSLHKNSVSQISVL-SGGKAKCSQFCTTGMDG 352
Query: 362 KIVTWDLESQEDLL 375
+ WD++S E L
Sbjct: 353 GMSIWDVKSLESAL 366
>ZFIN|ZDB-GENE-030131-7414 [details] [associations]
symbol:arpc1b "actin related protein 2/3 complex,
subunit 1B" species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-7414
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 CTD:10095 OMA:VLFTYDS EMBL:BX649536 EMBL:BX649559
EMBL:BC053229 IPI:IPI00506469 RefSeq:NP_998321.1 UniGene:Dr.76686
SMR:Q7T372 STRING:Q7T372 Ensembl:ENSDART00000033713 GeneID:335474
KEGG:dre:335474 InParanoid:Q7T372 NextBio:20810868 Uniprot:Q7T372
Length = 369
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 156/375 (41%), Positives = 223/375 (59%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY W K+HVL++H+ V+GIDW
Sbjct: 1 MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYNKAGNNWNKIHVLKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+WSPKENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+EQ+N+WWV K I+K S++ + WHPNNV LA S D KCR+FS +IK V+ K
Sbjct: 121 SVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + + W GV +S SGN +A+ H+S + V + G + + +
Sbjct: 181 APTAWGSKMPFGEVMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVA-VAEGGKTAVCTS 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGI-WTFIKFLDERKTSSS-GPKYG 300
+ LPL V F++E ++ G DC P++F D +F LD K S+ G
Sbjct: 240 LTSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNNAALSFGGKLDVPKQSAQKGMTAR 299
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
+F K +SK V +ES H N I+ I L + G ++ ++F T+G+D
Sbjct: 300 ERFQNLDKKATTESKEAV----LES------LHKNSISQI-SLLDGGKAKCSKFCTTGMD 348
Query: 361 GKIVTWDLESQEDLL 375
G + WD+++ E +
Sbjct: 349 GGMTIWDVKTLESAM 363
>UNIPROTKB|E2RMT4 [details] [associations]
symbol:ARPC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 KO:K05757 GO:GO:0030833
PANTHER:PTHR10709 CTD:10095 OMA:VLFTYDS EMBL:AAEX03004276
RefSeq:XP_536872.1 ProteinModelPortal:E2RMT4
Ensembl:ENSCAFT00000023944 GeneID:479744 KEGG:cfa:479744
NextBio:20854877 Uniprot:E2RMT4
Length = 372
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 160/374 (42%), Positives = 220/374 (58%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWVKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPHENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPNNV LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + S W GV +S SG+ +A+V H+S + D +A
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTMCLADADKKMAVA-T 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET-GIWTFIKFLDERKTSSSGPKYGS 301
+A LPL + F++E ++ G DC P++F D T G + LD K SS + G
Sbjct: 240 LASETLPLLALTFITENSLVAAGHDCFPVLFTYDSTTGTLSSGGRLDVPKQSS---QRGL 296
Query: 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361
E F L K +V S H N ++ I L G + ++F T+G+DG
Sbjct: 297 TARERFQNL---DKKASSEGSVASGSGLDSLHKNSVSQISVL-SGGKAECSQFCTTGMDG 352
Query: 362 KIVTWDLESQEDLL 375
+ WD++S E L
Sbjct: 353 GMSIWDVKSLESAL 366
>UNIPROTKB|O15143 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=TAS] [GO:0005200 "structural
constituent of cytoskeleton" evidence=TAS] [GO:0005885 "Arp2/3
protein complex" evidence=TAS] [GO:0006928 "cellular component
movement" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005200 eggNOG:COG2319 GO:GO:0006928 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
GO:GO:0005885 CTD:10095 OMA:VLFTYDS EMBL:AF006084 EMBL:AC004922
EMBL:BC002562 EMBL:BC002988 EMBL:BC007555 IPI:IPI00005160
RefSeq:NP_005711.1 UniGene:Hs.489284 ProteinModelPortal:O15143
SMR:O15143 DIP:DIP-41254N IntAct:O15143 MINT:MINT-5003785
STRING:O15143 PhosphoSite:O15143 PaxDb:O15143 PRIDE:O15143
DNASU:10095 Ensembl:ENST00000252725 Ensembl:ENST00000451682
GeneID:10095 KEGG:hsa:10095 UCSC:uc003upz.3 GeneCards:GC07P098971
HGNC:HGNC:704 HPA:HPA004832 MIM:604223 neXtProt:NX_O15143
PharmGKB:PA24998 InParanoid:O15143 PhylomeDB:O15143 ChiTaRS:ARPC1B
GenomeRNAi:10095 NextBio:38181 ArrayExpress:O15143 Bgee:O15143
CleanEx:HS_ARPC1B Genevestigator:O15143 Uniprot:O15143
Length = 372
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 157/374 (41%), Positives = 220/374 (58%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPNNV LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + S W GV +S SG+ +A+V H+S + D +A
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADADKKMAVA-T 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET-GIWTFIKFLDERKTSSSGPKYGS 301
+A LPL + F+++ ++ G DC P++F D G+ +F LD K SS + G
Sbjct: 240 LASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGMLSFGGRLDVPKQSS---QRGL 296
Query: 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361
E F L K + H N ++ I L G ++ ++F T+G+DG
Sbjct: 297 TARERFQNL---DKKASSEGGTAAGAGLDSLHKNSVSQISVL-SGGKAKCSQFCTTGMDG 352
Query: 362 KIVTWDLESQEDLL 375
+ WD++S E L
Sbjct: 353 GMSIWDVKSLESAL 366
>MGI|MGI:1928896 [details] [associations]
symbol:Arpc1a "actin related protein 2/3 complex, subunit
1A" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=TAS] [GO:0008150
"biological_process" evidence=ND] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1928896 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 CTD:10552
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OMA:KKSGNQW OrthoDB:EOG4NZTTG
GO:GO:0030833 PANTHER:PTHR10709 ChiTaRS:ARPC1A EMBL:AB024984
EMBL:AK076107 EMBL:AK145663 EMBL:BC001988 IPI:IPI00127987
RefSeq:NP_062741.1 UniGene:Mm.371610 ProteinModelPortal:Q9R0Q6
SMR:Q9R0Q6 IntAct:Q9R0Q6 STRING:Q9R0Q6 PhosphoSite:Q9R0Q6
PaxDb:Q9R0Q6 PRIDE:Q9R0Q6 Ensembl:ENSMUST00000031625 GeneID:56443
KEGG:mmu:56443 UCSC:uc009ama.1 InParanoid:Q9R0Q6 NextBio:312642
Bgee:Q9R0Q6 CleanEx:MM_ARPC1A Genevestigator:Q9R0Q6
GermOnline:ENSMUSG00000029621 GO:GO:0005885 Uniprot:Q9R0Q6
Length = 370
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 163/372 (43%), Positives = 219/372 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SGN LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGNRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 240 STLRTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDVPKQSI---QRN 296
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 297 MSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 349
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 350 GAMTIWDFKTLE 361
>RGD|620834 [details] [associations]
symbol:Arpc1a "actin related protein 2/3 complex, subunit 1A"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003779 "actin binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:620834 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005856 CTD:10552
HOVERGEN:HBG050560 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
EMBL:AF315378 IPI:IPI00200845 RefSeq:NP_112408.1 UniGene:Rn.844
ProteinModelPortal:Q99PD4 SMR:Q99PD4 IntAct:Q99PD4 PRIDE:Q99PD4
GeneID:81824 KEGG:rno:81824 NextBio:615755 Genevestigator:Q99PD4
Uniprot:Q99PD4
Length = 370
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 162/372 (43%), Positives = 219/372 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 240 STLRTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDVPKQSI---QRN 296
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 297 MSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 349
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 350 GAMTIWDFKTLE 361
>UNIPROTKB|Q5ZJI7 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 CTD:10552 GeneTree:ENSGT00390000008339
HOGENOM:HOG000181752 HOVERGEN:HBG050560 KO:K05757 OMA:KKSGNQW
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:AADN02023774
EMBL:AJ720447 IPI:IPI00574693 RefSeq:NP_001072963.1
UniGene:Gga.3197 SMR:Q5ZJI7 STRING:Q5ZJI7
Ensembl:ENSGALT00000007463 Ensembl:ENSGALT00000040792 GeneID:770269
KEGG:gga:770269 InParanoid:Q5ZJI7 NextBio:20920490 Uniprot:Q5ZJI7
Length = 370
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 161/373 (43%), Positives = 217/373 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + + S W V +S SGN LA+V H+S + V D + +
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGAGSGGWVHSVSFSASGNRLAWVSHDSTVS-VADASKNMMV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G+ TF+ LD PK
Sbjct: 240 SQLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNCDDRGLLTFVSKLDI-------PKQS 292
Query: 301 SQFS-EAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGL 359
Q + A + K D + T H N I V + E +F T+G+
Sbjct: 293 IQRNISAMERFRNMDKRATTEDRNTTLET---LHQNSITQ-VSIYEIDKRDCRKFCTTGI 348
Query: 360 DGKIVTWDLESQE 372
DG + WD ++ E
Sbjct: 349 DGAMTIWDFKTLE 361
>UNIPROTKB|E2QYP4 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AAEX03004277 ProteinModelPortal:E2QYP4
PRIDE:E2QYP4 Ensembl:ENSCAFT00000036371 NextBio:20854878
Uniprot:E2QYP4
Length = 366
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 162/370 (43%), Positives = 218/370 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 240 STLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSI---QRN 296
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 297 MSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 349
Query: 361 GKIVTWDLES 370
G + WD +S
Sbjct: 350 GAMTIWDFKS 359
>UNIPROTKB|F1PT97 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 OMA:KKSGNQW
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AAEX03004277
Ensembl:ENSCAFT00000023968 Uniprot:F1PT97
Length = 401
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 162/372 (43%), Positives = 219/372 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 32 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW 91
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 92 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 151
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 152 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 211
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 212 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 270
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 271 STLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSI---QRN 327
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 328 MSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 380
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 381 GAMTIWDFKTLE 392
>UNIPROTKB|Q92747 [details] [associations]
symbol:ARPC1A "Actin-related protein 2/3 complex subunit
1A" species:9606 "Homo sapiens" [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=TAS] [GO:0030036 "actin cytoskeleton
organization" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
EMBL:CH236956 EMBL:CH471091 CTD:10552 HOVERGEN:HBG050560 KO:K05757
OMA:KKSGNQW OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709
EMBL:Y08999 EMBL:BC039594 EMBL:BC047889 EMBL:BC054027
IPI:IPI00333068 RefSeq:NP_006400.2 UniGene:Hs.124126
ProteinModelPortal:Q92747 SMR:Q92747 DIP:DIP-33142N IntAct:Q92747
STRING:Q92747 PhosphoSite:Q92747 DMDM:88984001 PaxDb:Q92747
PeptideAtlas:Q92747 PRIDE:Q92747 DNASU:10552
Ensembl:ENST00000262942 GeneID:10552 KEGG:hsa:10552 UCSC:uc003upx.2
GeneCards:GC07P098923 HGNC:HGNC:703 HPA:HPA004334 MIM:604220
neXtProt:NX_Q92747 PharmGKB:PA24997 InParanoid:Q92747
PhylomeDB:Q92747 ChiTaRS:ARPC1A GenomeRNAi:10552 NextBio:40025
ArrayExpress:Q92747 Bgee:Q92747 CleanEx:HS_ARPC1A
Genevestigator:Q92747 GermOnline:ENSG00000013455 Uniprot:Q92747
Length = 370
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 162/372 (43%), Positives = 219/372 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 240 STLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSI---QRN 296
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 297 MSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 349
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 350 GAMTIWDFKTLE 361
>UNIPROTKB|F1REX9 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GeneTree:ENSGT00390000008339 OMA:KKSGNQW GO:GO:0030833
PANTHER:PTHR10709 EMBL:FP103031 Ensembl:ENSSSCT00000008349
Uniprot:F1REX9
Length = 370
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 162/372 (43%), Positives = 219/372 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 240 STLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDLPKQSI---QRN 296
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 297 LSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 349
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 350 GAMTIWDFKTLE 361
>UNIPROTKB|Q1JP79 [details] [associations]
symbol:ARPC1A "Actin-related protein 2/3 complex subunit
1A" species:9913 "Bos taurus" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 EMBL:BT025475
EMBL:BC147946 IPI:IPI00696217 RefSeq:NP_001068827.1 UniGene:Bt.1766
ProteinModelPortal:Q1JP79 SMR:Q1JP79 STRING:Q1JP79 PRIDE:Q1JP79
Ensembl:ENSBTAT00000005555 GeneID:508402 KEGG:bta:508402 CTD:10552
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 InParanoid:Q1JP79 KO:K05757 OMA:KKSGNQW
OrthoDB:EOG4NZTTG NextBio:20868503 ArrayExpress:Q1JP79
GO:GO:0030833 PANTHER:PTHR10709 Uniprot:Q1JP79
Length = 370
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 162/372 (43%), Positives = 219/372 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGGQWVKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S +
Sbjct: 240 STLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSI---QRN 296
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
E F + ++ N A+E+ H N I V + E +F T+G+D
Sbjct: 297 MSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTTGID 349
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 350 GAMTIWDFKTLE 361
>ZFIN|ZDB-GENE-040116-1 [details] [associations]
symbol:arpc1a "actin related protein 2/3 complex,
subunit 1A" species:7955 "Danio rerio" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040116-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 eggNOG:COG2319 CTD:10552 GeneTree:ENSGT00390000008339
HOGENOM:HOG000181752 HOVERGEN:HBG050560 KO:K05757 OMA:KKSGNQW
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:BX649559
EMBL:BC048036 EMBL:BC167955 EMBL:AY398313 IPI:IPI00490517
RefSeq:NP_958500.1 UniGene:Dr.3270 SMR:Q7ZUQ0 STRING:Q7ZUQ0
Ensembl:ENSDART00000014729 GeneID:394243 KEGG:dre:394243
InParanoid:Q7ZUQ0 NextBio:20815152 Uniprot:Q7ZUQ0
Length = 370
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 161/374 (43%), Positives = 217/374 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K+H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKVHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDD-VGPSPL 239
S FG+ + + + S W V +S SGN LA+V H+S + VD + +P
Sbjct: 181 APTPWGSKMPFGQVMTEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTISSTPS 240
Query: 240 AQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKY 299
F L L V FVSE ++ G DC PM+F+ D+ G TF LD PK
Sbjct: 241 QLKTEF--LALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFTSKLDI-------PKQ 291
Query: 300 GSQFS-EAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG 358
Q + A + K D + T H N I V + E +F T+G
Sbjct: 292 SIQRNISAMERFRNMDKRATTEDRNSTLET---LHQNSITQ-VSIYEGDKRDCRKFCTTG 347
Query: 359 LDGKIVTWDLESQE 372
+DG + WD ++ E
Sbjct: 348 IDGAMTIWDFKTLE 361
>UNIPROTKB|Q58CQ2 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9913 "Bos taurus" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 EMBL:BT021526 EMBL:BT021895 EMBL:BT026160
EMBL:BC102942 IPI:IPI00693939 RefSeq:NP_001014844.1
UniGene:Bt.23192 PDB:1K8K PDB:1TYQ PDB:1U2V PDB:2P9I PDB:2P9K
PDB:2P9L PDB:2P9N PDB:2P9P PDB:2P9S PDB:2P9U PDB:3DXK PDB:3DXM
PDB:3RSE PDBsum:1K8K PDBsum:1TYQ PDBsum:1U2V PDBsum:2P9I
PDBsum:2P9K PDBsum:2P9L PDBsum:2P9N PDBsum:2P9P PDBsum:2P9S
PDBsum:2P9U PDBsum:3DXK PDBsum:3DXM PDBsum:3RSE
ProteinModelPortal:Q58CQ2 SMR:Q58CQ2 DIP:DIP-29791N STRING:Q58CQ2
PRIDE:Q58CQ2 Ensembl:ENSBTAT00000064158 GeneID:326600
KEGG:bta:326600 CTD:10095 InParanoid:Q58CQ2 OMA:VLFTYDS
EvolutionaryTrace:Q58CQ2 NextBio:20809662 ArrayExpress:Q58CQ2
Uniprot:Q58CQ2
Length = 372
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 155/374 (41%), Positives = 218/374 (58%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW ++H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P E KFAVGSG++ +
Sbjct: 61 APDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPN+V LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE + + S W GV +S +G+ +A+V H+S + D +A
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA-T 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET-GIWTFIKFLDERKTSSSGPKYGS 301
+A LPL V F++E ++ G DC P++F D G +F LD K SS + G
Sbjct: 240 LASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSS---QRGL 296
Query: 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361
E F L K + + H N ++ I L G ++ ++F T+G+DG
Sbjct: 297 TARERFQNL---DKKASSEGSAAAGAGLDSLHKNSVSQISVL-SGGKAKCSQFCTTGMDG 352
Query: 362 KIVTWDLESQEDLL 375
+ WD+ S E L
Sbjct: 353 GMSIWDVRSLESAL 366
>ZFIN|ZDB-GENE-040625-80 [details] [associations]
symbol:zgc:86896 "zgc:86896" species:7955 "Danio
rerio" [GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040625-80 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 HOVERGEN:HBG050560 KO:K05757
GO:GO:0030833 PANTHER:PTHR10709 EMBL:BC071519 IPI:IPI00506039
RefSeq:NP_001002100.1 UniGene:Dr.104783 ProteinModelPortal:Q6IQ91
SMR:Q6IQ91 PRIDE:Q6IQ91 GeneID:415190 KEGG:dre:415190
NextBio:20818860 Bgee:Q6IQ91 Uniprot:Q6IQ91
Length = 357
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 148/367 (40%), Positives = 217/367 (59%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
++++ F + ++CHAW+ D +A PN+++VHIY++ ++W K+H L +H ++GIDW
Sbjct: 1 MSLYSFGLEPLSCHAWNKDRTQIAISPNSSDVHIYQMNGKEWIKIHELTEHSGRITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT + DRN+YVW + W PTLV++R+NRAA CV+WSP ENKFA+GSGAK +
Sbjct: 61 APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+E+EN+WW+SK I+K +S+V S+ WHPNN+ LA S D CR+FS +IK ++ +
Sbjct: 121 SICYFEKENDWWLSKHIKKPINSTVLSLDWHPNNMLLAAGSADLHCRIFSAYIKDIEDRP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242
S FGE +L+ W V +SPSG++LA+V HNS I D + Q
Sbjct: 181 GPTPWGSKMPFGELLLEYKECGGWVHSVCFSPSGDSLAWVSHNSAINVADASQGKEVTQ- 239
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQ 302
+ R LPL VL+VSE ++ G DC P F+ G F+K +D K SS G + Q
Sbjct: 240 LTTRHLPLLSVLYVSETEIVAAGHDCCPYQFSYKGPGSLEFVKKVDIPKQSSKGNRSAMQ 299
Query: 303 FSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGK 362
K + G G H N I + L E +++ +F++ GLDG
Sbjct: 300 HFRNLDKKATTEEEDTG---------LGSLHQNSITQLCIL-EGLKAKVEKFSSVGLDGA 349
Query: 363 IVTWDLE 369
+V WD +
Sbjct: 350 MVVWDFK 356
>WB|WBGene00000201 [details] [associations]
symbol:arx-3 species:6239 "Caenorhabditis elegans"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0043652 "engulfment of apoptotic cell" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 GO:GO:0040011 GO:GO:0040018 GO:GO:0000003
GO:GO:0043652 GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
KO:K05757 OMA:KKSGNQW GO:GO:0030833 PANTHER:PTHR10709 EMBL:AL110501
PIR:T27432 RefSeq:NP_499570.1 ProteinModelPortal:Q9U1R7 SMR:Q9U1R7
STRING:Q9U1R7 PaxDb:Q9U1R7 EnsemblMetazoa:Y79H2A.6 GeneID:3565442
KEGG:cel:CELE_Y79H2A.6 UCSC:Y79H2A.6 CTD:3565442 WormBase:Y79H2A.6
InParanoid:Q9U1R7 NextBio:956507 Uniprot:Q9U1R7
Length = 368
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 146/365 (40%), Positives = 210/365 (57%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
ITCHAW+ D +A ++N++HI++ W+ +H L +HD V+G+DW ++NRIV+
Sbjct: 17 ITCHAWNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVSC 76
Query: 73 SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN 132
S D+N++VW + + W P LV++R NRAA V+WSP ENKFAVGSGAK V +CYYE+EN+
Sbjct: 77 SQDKNAFVWTFDKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKEND 136
Query: 133 WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTK 192
WWVSK I+K S+VT + WH NNV LA S D KCRVFS ++K VD K
Sbjct: 137 WWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEKPSPNPWGQKMP 196
Query: 193 FGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRD 252
FG+ + + + W V +SPSG LA+V H+S + FVD S QN+ LP
Sbjct: 197 FGQLMSEYSVG-GWVHRVAFSPSGCRLAFVSHDSSVSFVDSTVDSQKVQNLLTIHLPFTT 255
Query: 253 VLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYG 312
V +++E V+ G DC+P++F + + K LD + S S + A +L+
Sbjct: 256 VEWITENSVVTAGHDCSPVLFVVSQDVLKEVCK-LDVPSAAKS-----STVNSAL-QLF- 307
Query: 313 QSKYGVGNDAVESSRTRGGT-HVNCINCIVPLREAGS-SRITRFTTSGLDGKIVTWDLES 370
K N+A E T H N I I+P +G+ + +FTT G DG + WDL++
Sbjct: 308 --KNIDRNNAAEKINVALKTLHQNRITQILP--HSGTVGNVVKFTTCGTDGIVALWDLKN 363
Query: 371 QEDLL 375
L+
Sbjct: 364 HPSLV 368
>UNIPROTKB|E9PF58 [details] [associations]
symbol:ARPC1A "Actin-related protein 2/3 complex subunit
1A" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 HGNC:HGNC:703 ChiTaRS:ARPC1A
EMBL:AC004922 EMBL:AC004834 IPI:IPI00926706
ProteinModelPortal:E9PF58 SMR:E9PF58 Ensembl:ENST00000432786
ArrayExpress:E9PF58 Bgee:E9PF58 Uniprot:E9PF58
Length = 279
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 129/258 (50%), Positives = 169/258 (65%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD K
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 181 ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKSVQV 239
Query: 241 QNVAFRDLPLRDVLFVSE 258
+ LPL V FVSE
Sbjct: 240 STLKTEFLPLLSVSFVSE 257
>UNIPROTKB|F1PWL8 [details] [associations]
symbol:F1PWL8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AAEX03005215 Ensembl:ENSCAFT00000023838
Uniprot:F1PWL8
Length = 366
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 148/372 (39%), Positives = 206/372 (55%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ +H +A PNN+EVH YK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNREHTQIALSPNNHEVH-YKKNGSQWVKAHELKEHNGHITGIDW 59
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+++ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 60 APKSDRIVTCGADRNAYVWSEKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 119
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK ++ + S + WH NNV +A S D KCRVFS +I+ D K
Sbjct: 120 SVCYFESENDWWVSKHLKCMLEDSFFQLDWHANNV-VAAGSCDFKCRVFSAYIERKDAKP 178
Query: 183 KKEGTSSDTKFGEQILQLDLSF--SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240
S G+ + + S W GV +S SG+ L +V +S + V D S
Sbjct: 179 ASTPWGSRMPLGQLMSEFGGSGPGGWVHGVGFSASGSRL-WVSPDSTVP-VADASESVQV 236
Query: 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300
+ LPL V FVSE V+ G DC PM+F D+ G T + LD K S
Sbjct: 237 STLKTEFLPL-SVSFVSENSVVAAGHDCCPMLFNYDDRGCLTLVSKLDIPKQSIQRNVSA 295
Query: 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLD 360
+ S + S G N A E G T V+ + E +F T+G+D
Sbjct: 296 VERSRNMDRR--ASTEG-RNTASEMLHQNGITQVS-------IYEVDKQDCRKFCTTGID 345
Query: 361 GKIVTWDLESQE 372
G + WD ++ E
Sbjct: 346 GVMTIWDFKTLE 357
>ASPGD|ASPL0000031126 [details] [associations]
symbol:AN5778 species:162425 "Emericella nidulans"
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005885 "Arp2/3
protein complex" evidence=IEA] [GO:0030479 "actin cortical patch"
evidence=IEA] [GO:0051286 "cell tip" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319
EMBL:AACD01000098 EMBL:BN001305 GO:GO:0045010 HOGENOM:HOG000181752
KO:K05757 PANTHER:PTHR10709 OMA:FQTLCGD OrthoDB:EOG42FWS2
RefSeq:XP_663382.1 ProteinModelPortal:Q5B102 STRING:Q5B102
EnsemblFungi:CADANIAT00003275 GeneID:2872066 KEGG:ani:AN5778.2
Uniprot:Q5B102
Length = 363
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 141/366 (38%), Positives = 204/366 (55%)
Query: 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRS 66
H F I H++S D +++A NN V +Y+ K+ L+ H++ V+ +D + S
Sbjct: 8 HLFHAPIADHSFSSDKSVLAVARENN-VELYQKTGSKFSLTDELKGHEKTVTSVDIAPNS 66
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
RIVT S DRN+YVW Q + W PTLV+LR+NRAA V+WSP E KFAVGSGA+ + +CY
Sbjct: 67 GRIVTCSQDRNAYVWEQTPTGWKPTLVLLRINRAATFVRWSPSEQKFAVGSGARVIAVCY 126
Query: 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEG 186
+E+EN+WW+SK ++K S++T++AWHPN+V LA STD RVFS+FIKGVD + +
Sbjct: 127 FEEENDWWISKHLKKPIRSTITTLAWHPNSVLLAAGSTDSHARVFSSFIKGVDTRPEPSA 186
Query: 187 TSSDTKFGEQILQ-LDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS--PLAQ-N 242
F + L+ S W GV +SPSGN LA+ GH+S + V P P A N
Sbjct: 187 WGERLPFNTICGEFLNDSAGWIHGVCFSPSGNALAFTGHDSSVTIVYPSAPEQPPRAMLN 246
Query: 243 VAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQ 302
++ R LP +++ E +I G DC P DE G W L+ + +G GS
Sbjct: 247 ISTRLLPFNSLIWNGENEIIAAGHDCEPYRLRGDENG-WQ----LEGTIENKAGAGAGSV 301
Query: 303 FSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGK 362
E+ ++ Q A +T H N IN I + S + + +TSG+DG+
Sbjct: 302 REESALNMFRQMDLKGQTQADTQLKT---VHQNTINTIRVYEDTAGS-VHKISTSGVDGR 357
Query: 363 IVTWDL 368
+V W +
Sbjct: 358 VVIWTI 363
>FB|FBgn0001961 [details] [associations]
symbol:Arpc1 "Actin-related protein 2/3 complex, subunit 1"
species:7227 "Drosophila melanogaster" [GO:0007010 "cytoskeleton
organization" evidence=ISS] [GO:0030041 "actin filament
polymerization" evidence=NAS] [GO:0003779 "actin binding"
evidence=IEA;ISS] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS;NAS;TAS] [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISS] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=ISS] [GO:0007413 "axonal fasciculation"
evidence=IGI] [GO:0030037 "actin filament reorganization involved
in cell cycle" evidence=IMP] [GO:0007409 "axonogenesis"
evidence=IGI] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0030029
"actin filament-based process" evidence=IMP] [GO:0030589
"pseudocleavage involved in syncytial blastoderm formation"
evidence=IMP] [GO:0022416 "chaeta development" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IMP] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0051491 "positive regulation of filopodium assembly"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0003779 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0045747 GO:GO:0051491
GO:GO:0007413 GO:GO:0030037 GeneTree:ENSGT00390000008339 KO:K05757
OMA:KKSGNQW GO:GO:0030833 PANTHER:PTHR10709 GO:GO:0005885
GO:GO:0030589 GO:GO:0008407 GO:GO:0001745 EMBL:AY058778
EMBL:AJ133649 RefSeq:NP_476596.1 RefSeq:NP_723845.1
UniGene:Dm.19561 SMR:O97182 MINT:MINT-850983 STRING:O97182
EnsemblMetazoa:FBtr0080569 EnsemblMetazoa:FBtr0080570 GeneID:34793
KEGG:dme:Dmel_CG8978 UCSC:CG8978-RA CTD:34793 FlyBase:FBgn0001961
InParanoid:O97182 OrthoDB:EOG4CC2GP GenomeRNAi:34793 NextBio:790251
Uniprot:O97182
Length = 377
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 145/366 (39%), Positives = 203/366 (55%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
ITCHAW+ D +A PNN+E+HIY W+ VL +HD V GIDW+ +NRIV+
Sbjct: 14 ITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSC 73
Query: 73 SHDRNSYVWNQ-EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQEN 131
+ DRN+YVW Q + +W P LV+LR+NRAA CV+WSP ENKFAVGSGA+ + +CY+E EN
Sbjct: 74 AADRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESEN 133
Query: 132 NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDT 191
+WWVSK I+K S+VTS+ WHPNNV L STD K RVFS FIK DI+E T
Sbjct: 134 DWWVSKHIKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIK--DIEEPPTPTPWGN 191
Query: 192 K--FGEQILQLDLSFS----WAFGVKWSPSGNTLAYVGHNSMIYFVDDV-GPSPLAQNVA 244
+ G+ + + S + W V +S GN + +VGH+S + D G + +
Sbjct: 192 RKPLGQLMAEFRNSQTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADATNGNTVIRCRTG 251
Query: 245 FRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDE-RKTSSSGPKYGSQF 303
+ LP +VS V+ G+ C P++++ G LD+ +K SSG F
Sbjct: 252 Y--LPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGKLVLSGKLDKSQKKESSGITAMRIF 309
Query: 304 SEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKI 363
+ ++ D V S H N I V L + T+ +TSG+DG++
Sbjct: 310 QSMDRNMRTEN-----TDTVVDS-----IHQNAITS-VRLYAGDKASATKVSTSGVDGQL 358
Query: 364 VTWDLE 369
V W++E
Sbjct: 359 VIWNVE 364
>UNIPROTKB|F1RNS7 [details] [associations]
symbol:ARPC1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 GO:GO:0030833
PANTHER:PTHR10709 OMA:VLFTYDS EMBL:FP102617
Ensembl:ENSSSCT00000008365 Uniprot:F1RNS7
Length = 255
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 116/240 (48%), Positives = 159/240 (66%)
Query: 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82
A +A CPNN+EVHIY+ KW ++H L++H+ V+GIDW+ SNRIVT DRN+YVW
Sbjct: 15 AEIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT 74
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR 142
+G W PTLVILR+NRAA CV+W+P+ENKFAVGSG++ + ICY+EQEN+WWV K I+K
Sbjct: 75 LKGRTWKPTLVILRINRAARCVRWAPQENKFAVGSGSRVISICYFEQENDWWVCKHIKKP 134
Query: 143 HDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL 202
S+V S+ WHPNNV LA S D KCR+FS +IK V+ + S FGE + +
Sbjct: 135 IRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 194
Query: 203 SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVI 262
S W GV +S SG+ +A+V H+S + D +A +A LPL + F++E ++
Sbjct: 195 SCGWVHGVCFSASGSRVAWVSHDSTVCLADADKKMAVA-TLASETLPLLALTFITENSLV 253
>UNIPROTKB|D4A992 [details] [associations]
symbol:D4A992 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GeneTree:ENSGT00390000008339 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 IPI:IPI00957476 Ensembl:ENSRNOT00000066198
Uniprot:D4A992
Length = 329
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 133/297 (44%), Positives = 173/297 (58%)
Query: 4 IAVHQFA-QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+++HQF + ITCHAW+ D +A PNN+EVHIYK +W K H L++H+ ++GIDW
Sbjct: 1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA+ +
Sbjct: 61 APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
+CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRV +
Sbjct: 121 SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVIDGWEPPGAGNP 180
Query: 183 KKEGTSSDTKFGEQILQLD--LSFSWAFGVKW-SPSGNTLAYVGH---NSMIYFVDDVGP 236
S F + D L W+ V + S SG +V + D +
Sbjct: 181 TPVPCKSSIPFSNTTQKRDGSLGEGWSRSVSYTSLSGERAQWVRSPRTGTKAERTDSLWV 240
Query: 237 SPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTS 293
S L F LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S
Sbjct: 241 STL--RTEF--LPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDVPKQS 293
>UNIPROTKB|B4DLQ7 [details] [associations]
symbol:ARPC1A "cDNA FLJ57124, highly similar to
Actin-related protein 2/3 complex subunit 1A" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 HOGENOM:HOG000181752
HOVERGEN:HBG050560 GO:GO:0030833 PANTHER:PTHR10709 HGNC:HGNC:703
ChiTaRS:ARPC1A EMBL:AC004922 EMBL:AC004834 EMBL:AK297111
IPI:IPI00909730 SMR:B4DLQ7 STRING:B4DLQ7 Ensembl:ENST00000432884
Uniprot:B4DLQ7
Length = 345
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 135/312 (43%), Positives = 178/312 (57%)
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
IDW+ +S+RIVT DRN+YVW+Q+ W PTLVILR+NRAA V+WSP ENKFAVGSGA
Sbjct: 11 IDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGA 70
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179
+ + +CY+E EN+WWVSK I+K S+V S+ WHPNNV LA S D KCRVFS +IK VD
Sbjct: 71 RLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVD 130
Query: 180 IKEKKEGTSSDTKFGEQILQLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS 237
K S FG+ + + S + W GV +S SG+ LA+V H+S + V D S
Sbjct: 131 EKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVS-VADASKS 189
Query: 238 PLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGP 297
+ LPL V FVSE V+ G DC PM+F D+ G TF+ LD K S
Sbjct: 190 VQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSI--- 246
Query: 298 KYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTS 357
+ E F + ++ N A+E+ H N I V + E +F T+
Sbjct: 247 QRNMSAMERFRNMDKRATTEDRNTALET------LHQNSITQ-VSIYEVDKQDCRKFCTT 299
Query: 358 GLDGKIVTWDLE 369
G+DG + WD +
Sbjct: 300 GIDGAMTIWDFK 311
>UNIPROTKB|F8WCG3 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00927418 ProteinModelPortal:F8WCG3 SMR:F8WCG3
Ensembl:ENST00000451694 ArrayExpress:F8WCG3 Bgee:F8WCG3
Uniprot:F8WCG3
Length = 213
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 108/204 (52%), Positives = 140/204 (68%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKE 182
ICY+EQEN+WWV K I+K S+V S+ WHPNNV LA S D KCR+FS +IK V+ +
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180
Query: 183 KKEGTSSDTKFGEQILQLDLSFSW 206
S FGE + + S W
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGW 204
>POMBASE|SPBC14C8.06 [details] [associations]
symbol:arc1 "ARP2/3 actin-organizing complex subunit
Sop2" species:4896 "Schizosaccharomyces pombe" [GO:0000147 "actin
cortical patch assembly" evidence=IC] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005885 "Arp2/3 protein
complex" evidence=IDA] [GO:0006897 "endocytosis" evidence=IC]
[GO:0030479 "actin cortical patch" evidence=IDA] [GO:0032153 "cell
division site" evidence=IDA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IDA] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC14C8.06 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032153
GO:GO:0051286 EMBL:CU329671 eggNOG:COG2319 GO:GO:0006897
GenomeReviews:CU329671_GR GO:GO:0030479 GO:GO:0000147 GO:GO:0033205
HOGENOM:HOG000181752 KO:K05757 PANTHER:PTHR10709 GO:GO:0005885
GO:GO:0034314 PDB:3DWL PDBsum:3DWL EMBL:Y08998 EMBL:D89122
PIR:T39434 PIR:T42364 PIR:T45528 RefSeq:NP_595909.1
ProteinModelPortal:P78774 IntAct:P78774 STRING:P78774 PRIDE:P78774
EnsemblFungi:SPBC14C8.06.1 GeneID:2540002 KEGG:spo:SPBC14C8.06
OMA:FQTLCGD OrthoDB:EOG42FWS2 EvolutionaryTrace:P78774
NextBio:20801145 Uniprot:P78774
Length = 377
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 134/363 (36%), Positives = 196/363 (53%)
Query: 16 HAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD 75
HA++ N+V +Y+ W+ HD+IV+ +DW+ +SNRIVT S D
Sbjct: 17 HAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD 76
Query: 76 RNSYVWNQE-GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
RN+YV+ + W TLV+LRLNRAA V+WSP E+KFAVGSGA+ + +CY+EQEN+WW
Sbjct: 77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW 136
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194
VSK +++ S++ S+ WHPNNV LA D K V S +++ VD K + S F
Sbjct: 137 VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFN 196
Query: 195 EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS--PLAQ-NVAFRDLPLR 251
+ S W V +SPSGN LAY GH+S + P P A V LPLR
Sbjct: 197 TVCAEYP-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLR 255
Query: 252 DVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGS--QFSEAFGK 309
+L+ +E ++ G++ +P++ +E+G W + LD + +S G+ + E G
Sbjct: 256 SLLWANESAIVAAGYNYSPILLQGNESG-WAHTRDLDAGTSKTSFTHTGNTGEGREEEGP 314
Query: 310 L-YGQSKYGVGN-DAVESSRTRGGTHVNCINCIVPLRE-AGS-SRITRFTTSGLDGKIVT 365
+ + + N D SS++ N I LR AG+ IT FT+SG DG++V
Sbjct: 315 VSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVL 374
Query: 366 WDL 368
W L
Sbjct: 375 WTL 377
>UNIPROTKB|G4MYZ4 [details] [associations]
symbol:MGG_04352 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0045010 KO:K05757 PANTHER:PTHR10709
GO:GO:0005885 EMBL:CM001232 RefSeq:XP_003713462.1
EnsemblFungi:MGG_04352T0 GeneID:2677781 KEGG:mgr:MGG_04352
Uniprot:G4MYZ4
Length = 363
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 138/373 (36%), Positives = 200/373 (53%)
Query: 1 MAAIAVHQ-FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSG 59
MA VH F I H++S D +A ++ V +Y ++ + L+ HD+ V+
Sbjct: 1 MAPPEVHHLFHNPIADHSFSADRQTLAIA-RDSTVELYGRAEKGFRLQDELKGHDKTVTS 59
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
+D + S RIVT S DRN+ VW + + PTLV+LR+NRAA V+WSP E KFAVGSG
Sbjct: 60 VDIAPSSGRIVTCSQDRNALVWEPSPTGYKPTLVLLRINRAATYVRWSPSETKFAVGSGD 119
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179
+ + ICY+E+EN+WWVSK ++K S++T+VAWHPN+V LA STD RV S+FIKGVD
Sbjct: 120 RVIAICYFEEENDWWVSKHLKKPIRSTITTVAWHPNSVLLAAGSTDAHARVLSSFIKGVD 179
Query: 180 IKEKKEGTSSDTKFGEQILQ-LDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS- 237
K + G F + L+ S W V +SPSG LA+ H+S I V GP
Sbjct: 180 TKPEPTGWGERLPFNTVCGEYLNNSAGWVHAVAFSPSGEALAFAAHDSSITVVYPGGPDQ 239
Query: 238 -PLAQ-NVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSS 295
P A ++ + LP +++ E +I G+DC F E G W L+ S
Sbjct: 240 PPRALISINTQLLPFMGLVWNGESEIIAAGYDCEAFRFRGGEGG-WQLSGSLE----SKG 294
Query: 296 GPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFT 355
P ++ E+ ++ Q V+ H N I I +E+GS + + +
Sbjct: 295 RPGADAEREESALNMFRQMDL---KGKVKDDTQLKTVHQNTITTIRSFQESGSG-LVKMS 350
Query: 356 TSGLDGKIVTWDL 368
+SG+DG+IV WD+
Sbjct: 351 SSGVDGRIVIWDV 363
>CGD|CAL0002151 [details] [associations]
symbol:ARC40 species:5476 "Candida albicans" [GO:0030479
"actin cortical patch" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell division
site" evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002151 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319 GO:GO:0009267
GO:GO:0036170 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
EMBL:AACQ01000125 RefSeq:XP_713498.1 ProteinModelPortal:Q59V79
STRING:Q59V79 GeneID:3644866 KEGG:cal:CaO19.3873 Uniprot:Q59V79
Length = 384
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 139/386 (36%), Positives = 213/386 (55%)
Query: 5 AVHQFAQC-ITCHAWSPDHAMVAFCPNNNEVHIYKL----IQEKWEKLHVLQKHDQIVSG 59
A++Q I H +SPD +++A N+V +Y++ + K + + VL+ HD+ V+
Sbjct: 6 AIYQLGHLPIKDHVFSPDRSILAIT-KGNDVEVYQISPSNLSSKPQLIAVLKDHDKTVTS 64
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
+D S ++I+T S DRN+ VW E+ PTLV+LR+NRAA +WSP +KFAVGS
Sbjct: 65 VDISPDGSKILTCSQDRNALVWEYANGEYKPTLVLLRINRAATVCRWSPDGSKFAVGSSD 124
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179
+ + +CYYE+EN+WWVSK ++K S++T++ WHPN V LA STDG RVFS +IKG+D
Sbjct: 125 RIIAVCYYEEENDWWVSKHLKKPLKSTITTIDWHPNGVLLACGSTDGHVRVFSGYIKGID 184
Query: 180 IKEKKEGTSSDTKFGEQILQLDLSF---SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG- 235
K + + TK Q L D + +W GVK+SP GN LAYV H+S + FV G
Sbjct: 185 AKP--DPSVWGTKLPFQTLCGDYTNETNAWIHGVKFSPDGNALAYVSHDSSVGFVYPQGE 242
Query: 236 --PSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTS 293
P NV +LP + V++++++ V GF CN +VF DE G W ++E+K
Sbjct: 243 GLPPRAIFNVKTDNLPFKSVVWLNDQQVCAGGFTCNLVVFQGDEHG-WQQAYQVEEQKDL 301
Query: 294 SSGPKY-----GSQFSEAFGKLYGQSKYGV----GNDAVESSRTRGGTHVNCI--NCIVP 342
+ + G E + + G + S+ + +N I N I
Sbjct: 302 TKEVPHSKLGEGDDDDEEISSHQALNMFKQMDLKGRVSKPSAGGKPAKALNTIHQNTINS 361
Query: 343 LREAGSSRITRFTTSGLDGKIVTWDL 368
+R R++ TSG+DGK+V +++
Sbjct: 362 IRNFDQGRVS---TSGIDGKVVIFNV 384
>UNIPROTKB|Q59V79 [details] [associations]
symbol:ARC40 "Putative uncharacterized protein ARC40"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002151 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 GO:GO:0009267 GO:GO:0036170 KO:K05757 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AACQ01000125 RefSeq:XP_713498.1
ProteinModelPortal:Q59V79 STRING:Q59V79 GeneID:3644866
KEGG:cal:CaO19.3873 Uniprot:Q59V79
Length = 384
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 139/386 (36%), Positives = 213/386 (55%)
Query: 5 AVHQFAQC-ITCHAWSPDHAMVAFCPNNNEVHIYKL----IQEKWEKLHVLQKHDQIVSG 59
A++Q I H +SPD +++A N+V +Y++ + K + + VL+ HD+ V+
Sbjct: 6 AIYQLGHLPIKDHVFSPDRSILAIT-KGNDVEVYQISPSNLSSKPQLIAVLKDHDKTVTS 64
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
+D S ++I+T S DRN+ VW E+ PTLV+LR+NRAA +WSP +KFAVGS
Sbjct: 65 VDISPDGSKILTCSQDRNALVWEYANGEYKPTLVLLRINRAATVCRWSPDGSKFAVGSSD 124
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179
+ + +CYYE+EN+WWVSK ++K S++T++ WHPN V LA STDG RVFS +IKG+D
Sbjct: 125 RIIAVCYYEEENDWWVSKHLKKPLKSTITTIDWHPNGVLLACGSTDGHVRVFSGYIKGID 184
Query: 180 IKEKKEGTSSDTKFGEQILQLDLSF---SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG- 235
K + + TK Q L D + +W GVK+SP GN LAYV H+S + FV G
Sbjct: 185 AKP--DPSVWGTKLPFQTLCGDYTNETNAWIHGVKFSPDGNALAYVSHDSSVGFVYPQGE 242
Query: 236 --PSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTS 293
P NV +LP + V++++++ V GF CN +VF DE G W ++E+K
Sbjct: 243 GLPPRAIFNVKTDNLPFKSVVWLNDQQVCAGGFTCNLVVFQGDEHG-WQQAYQVEEQKDL 301
Query: 294 SSGPKY-----GSQFSEAFGKLYGQSKYGV----GNDAVESSRTRGGTHVNCI--NCIVP 342
+ + G E + + G + S+ + +N I N I
Sbjct: 302 TKEVPHSKLGEGDDDDEEISSHQALNMFKQMDLKGRVSKPSAGGKPAKALNTIHQNTINS 361
Query: 343 LREAGSSRITRFTTSGLDGKIVTWDL 368
+R R++ TSG+DGK+V +++
Sbjct: 362 IRNFDQGRVS---TSGIDGKVVIFNV 384
>UNIPROTKB|H9KZ89 [details] [associations]
symbol:ARPC1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GeneTree:ENSGT00390000008339 GO:GO:0030833 PANTHER:PTHR10709
OMA:VLFTYDS EMBL:AADN02001635 Ensembl:ENSGALT00000007478
Uniprot:H9KZ89
Length = 270
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 112/237 (47%), Positives = 149/237 (62%)
Query: 59 GIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG 118
GIDW+ SNR+VT DRN+YVW +G+ W PTLVILR+NRAA CV+WSPKENKFAVGSG
Sbjct: 1 GIDWAPESNRLVTCGTDRNAYVWTLKGNVWKPTLVILRINRAARCVKWSPKENKFAVGSG 60
Query: 119 AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGV 178
++ + ICY+EQEN+WWV I+K S+V S+ WHPNNV LA S D KCR+FS +IK V
Sbjct: 61 SRLISICYFEQENDWWVCNHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEV 120
Query: 179 DIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238
+ + S FGE + + S W + +S SGN +A+V H+S + D
Sbjct: 121 EERPSPTPWGSKMPFGELMFESSSSCGWVHSICFSASGNRVAWVSHDSTLCLADANKKMA 180
Query: 239 LAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE-TGIWTFIKFLDERKTSS 294
+A ++ LPL V F++E ++ G DC PM+F +E G +F LD K SS
Sbjct: 181 VA-SLCTETLPLLAVTFITESSLVAAGHDCYPMLFTYEEGPGTLSFGGKLDVPKQSS 236
>SGD|S000000438 [details] [associations]
symbol:ARC40 "Subunit of the ARP2/3 complex" species:4932
"Saccharomyces cerevisiae" [GO:0003779 "actin binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0005885 "Arp2/3 protein complex" evidence=IDA] [GO:0007015
"actin filament organization" evidence=IMP] [GO:0000001
"mitochondrion inheritance" evidence=TAS] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0030479 "actin cortical
patch" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045010 "actin nucleation" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000438 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:BK006936 GO:GO:0030479
GO:GO:0000001 GO:GO:0045010 GeneTree:ENSGT00390000008339
HOGENOM:HOG000181752 KO:K05757 PANTHER:PTHR10709 GO:GO:0005885
OMA:FQTLCGD OrthoDB:EOG42FWS2 EMBL:Z36103 EMBL:AY692758 PIR:S46110
RefSeq:NP_009793.1 ProteinModelPortal:P38328 SMR:P38328
DIP:DIP-2219N IntAct:P38328 MINT:MINT-382482 STRING:P38328
PaxDb:P38328 PeptideAtlas:P38328 EnsemblFungi:YBR234C GeneID:852536
KEGG:sce:YBR234C CYGD:YBR234c NextBio:971595 Genevestigator:P38328
GermOnline:YBR234C GO:GO:0043130 Uniprot:P38328
Length = 384
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 134/384 (34%), Positives = 205/384 (53%)
Query: 2 AAIAVHQFAQC-ITCHAWSPDHAMVAF-CPNNNEVHIYKLIQEKWEKLHV-LQKHDQIVS 58
+ +AV++ + I H +S D +++A C + +Y++ L L+ HD+ ++
Sbjct: 10 SVVAVYKLVKAPIYSHCFSQDKSILAVTC--ETDCLVYRVSNNTPPVLFATLKDHDKTIT 67
Query: 59 GIDWSVRSNRIVTVSHDRNSYVWN--QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVG 116
+D S+ RIVT S DRN+YVW +G+ + PTLV+LR+NRAA V W+P KFAVG
Sbjct: 68 AVDISIHG-RIVTCSQDRNAYVWEPLSDGT-YKPTLVLLRINRAATSVTWAPNGYKFAVG 125
Query: 117 SGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIK 176
S A+ + +CYYE ENNWWVSK I+K S++ ++WH N V LA TDG RVFS FIK
Sbjct: 126 SSARIIAVCYYEHENNWWVSKHIKKPIKSTINCLSWHANGVLLAAGGTDGFMRVFSGFIK 185
Query: 177 GVDIKEKKEGTSSDTKFGEQILQLD-LSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG 235
G+D KE G+ KF L + S+ V+W +AYV H+ + VD
Sbjct: 186 GLDSKESVAGSPWGQKFPFGCLIREWYQGSYIHDVEWRSQMERIAYVAHDGTLNVVDYQS 245
Query: 236 PSPLAQNV-AFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSS 294
P Q+V A LP R ++++++ ++ G+ C+P++F+ G W F K LD+ +
Sbjct: 246 P---VQSVNAPEGLPYRSLVWINDHEIVCGGYSCHPVLFSEASEG-WKFAKNLDKSDNNK 301
Query: 295 SGPKYGS-QFSEAFGKLYGQSKYGVGN-------D--AVESSRTRGGTHVNCINCIVPLR 344
S S E G S +G+ D S+ + H N I + P
Sbjct: 302 SSALTASGNTDELSGNNDESSTFGISALRKFKELDLKGKVSTDVQESAHENAIVELRPFA 361
Query: 345 EAGSSRITRFTTSGLDGKIVTWDL 368
E+ + +IT+ ++ GLDGKIV + +
Sbjct: 362 ES-NGQITQVSSCGLDGKIVIYTI 384
>UNIPROTKB|C9J6C8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00925033
ProteinModelPortal:C9J6C8 SMR:C9J6C8 STRING:C9J6C8
Ensembl:ENST00000431816 ArrayExpress:C9J6C8 Bgee:C9J6C8
Uniprot:C9J6C8
Length = 133
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 78/133 (58%), Positives = 101/133 (75%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWV 135
ICY+EQEN+WWV
Sbjct: 121 SICYFEQENDWWV 133
>UNIPROTKB|C9JFG9 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JFG9 SMR:C9JFG9
Ensembl:ENST00000427217 Bgee:C9JFG9 Uniprot:C9JFG9
Length = 133
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 78/133 (58%), Positives = 101/133 (75%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWV 135
ICY+EQEN+WWV
Sbjct: 121 SICYFEQENDWWV 133
>UNIPROTKB|C9JQM8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JQM8 SMR:C9JQM8
Ensembl:ENST00000458033 Bgee:C9JQM8 Uniprot:C9JQM8
Length = 133
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 78/133 (58%), Positives = 101/133 (75%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENNWWV 135
ICY+EQEN+WWV
Sbjct: 121 SICYFEQENDWWV 133
>UNIPROTKB|C9JEY1 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00924615
ProteinModelPortal:C9JEY1 SMR:C9JEY1 STRING:C9JEY1
Ensembl:ENST00000417330 ArrayExpress:C9JEY1 Bgee:C9JEY1
Uniprot:C9JEY1
Length = 130
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 75/130 (57%), Positives = 98/130 (75%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQENN 132
ICY+EQEN+
Sbjct: 121 SICYFEQEND 130
>UNIPROTKB|C9J4Z7 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927612
ProteinModelPortal:C9J4Z7 SMR:C9J4Z7 STRING:C9J4Z7
Ensembl:ENST00000455009 ArrayExpress:C9J4Z7 Bgee:C9J4Z7
Uniprot:C9J4Z7
Length = 128
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 74/128 (57%), Positives = 96/128 (75%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120
Query: 123 CICYYEQE 130
ICY+EQE
Sbjct: 121 SICYFEQE 128
>UNIPROTKB|C9K057 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927861
ProteinModelPortal:C9K057 SMR:C9K057 STRING:C9K057
Ensembl:ENST00000443222 ArrayExpress:C9K057 Bgee:C9K057
Uniprot:C9K057
Length = 108
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 60/108 (55%), Positives = 78/108 (72%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKE 110
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV+W+P E
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE 108
>UNIPROTKB|C9JBJ7 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927206
ProteinModelPortal:C9JBJ7 SMR:C9JBJ7 STRING:C9JBJ7
Ensembl:ENST00000414376 HOGENOM:HOG000195746 ArrayExpress:C9JBJ7
Bgee:C9JBJ7 Uniprot:C9JBJ7
Length = 102
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 57/102 (55%), Positives = 73/102 (71%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCV 104
+ SNRIVT DRN+YVW +G W PTLVILR+NRAA CV
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCV 102
>UNIPROTKB|C9JTT6 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925248 ProteinModelPortal:C9JTT6 SMR:C9JTT6
STRING:C9JTT6 Ensembl:ENST00000418347 ArrayExpress:C9JTT6
Bgee:C9JTT6 Uniprot:C9JTT6
Length = 83
Score = 247 (92.0 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 4 IAVHQF-AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
+A H F + I+CHAW+ D +A CPNN+EVHIY+ KW K+H L++H+ V+GIDW
Sbjct: 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDW 60
Query: 63 SVRSNRIVTVSHDRNSYVWNQEG 85
+ SNRIVT DRN+YVW +G
Sbjct: 61 APESNRIVTCGTDRNAYVWTLKG 83
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 192 (72.6 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 48/179 (26%), Positives = 79/179 (44%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW+P ++A C + + I+ + WE VLQ H + V + WS N + + S D
Sbjct: 23 AWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFD 82
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W ++ ++ V+ CV W+P N A S K+V I ++EN +
Sbjct: 83 ATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYEC 142
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194
++ H V V WHP LA+ S D V+ + + EG +S T +G
Sbjct: 143 VSVVNS-HTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTS-TVWG 199
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/168 (26%), Positives = 71/168 (42%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVLQKHDQIVSGIDWSVRSNRIVT 71
+ C AW+P ++A C + V I+++ +E ++E + V+ H Q V + W + +
Sbjct: 108 VKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLAS 167
Query: 72 VSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI---CYYE 128
S+D N V+ +E +W + + + P + A S TV I C E
Sbjct: 168 CSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPE 227
Query: 129 --QENN---WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
QE W + H +V +AW P LAT D RVF
Sbjct: 228 GGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVF 275
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/190 (24%), Positives = 76/190 (40%)
Query: 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR 65
V+ Q + W P ++A C +N V +YK + WE L+ H V G+ +
Sbjct: 146 VNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPS 205
Query: 66 SNRIVTVSHDRNSYVWN-------QEGSE--WVPTLVILRLN-RAALCVQWSPKENKFAV 115
R+ + S D +W QEG++ W + + R + W P A
Sbjct: 206 GQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALAT 265
Query: 116 GSGAKTVCICYYEQENN------WWVSKLIRKRHDSSVTSVAWHPNNV-FLATTSTDGKC 168
G V + + E E + +S + K H V +AWHP L + S +G+
Sbjct: 266 ACGDDGVRV-FKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNGEI 324
Query: 169 RVFSTFIKGV 178
V++ + GV
Sbjct: 325 AVWN-YQSGV 333
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQWSPKENKFAVGSG 118
+ W+ + + + DR +W +EG W T++ R V WSP N A S
Sbjct: 22 VAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASF 81
Query: 119 AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
T CI ++++N+ + + + H++ V VAW P+ LAT S D
Sbjct: 82 DATTCI--WKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRD 126
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/179 (26%), Positives = 80/179 (44%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW+P ++A C + + I+ + WE VLQ H + V + WS N + + S D
Sbjct: 23 AWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFD 82
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W ++ ++ V+ CV W+P N+ A S K+V I ++E+ +
Sbjct: 83 ATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYEC 142
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194
++ H V V WHP LA+ S D V+ + + EG +S T +G
Sbjct: 143 VSVVNS-HTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTS-TVWG 199
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 42/181 (23%), Positives = 72/181 (39%)
Query: 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR 65
V+ Q + W P ++A C +N V +YK + WE L+ H V G+ +
Sbjct: 146 VNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPS 205
Query: 66 SNRIVTVSHDRNSYVWNQ------EGSEWVPTLVILRLN-RAALCVQWSPKENKFAVGSG 118
R+ + S DR +W + + + W + + R + W P A G
Sbjct: 206 GQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACG 265
Query: 119 AKTVCICYYEQENN------WWVSKLIRKRHDSSVTSVAWHPNNV-FLATTSTDGKCRVF 171
V + + E E + +S + K H V +AWHP L + S +G+ V+
Sbjct: 266 DDGVRV-FKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVW 324
Query: 172 S 172
+
Sbjct: 325 N 325
Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 42/165 (25%), Positives = 70/165 (42%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVLQKHDQIVSGIDWSVRSNRIVT 71
+ C AW+P +A C + V I+++ +E ++E + V+ H Q V + W + +
Sbjct: 108 VKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLAS 167
Query: 72 VSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI---CYYE 128
S+D N V+ +E +W + + + P + A S +TV I C
Sbjct: 168 CSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPG 227
Query: 129 --QENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
Q+ W + H +V +AW P LAT D RVF
Sbjct: 228 GGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVF 272
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQWSPKENKFAVGSG 118
+ W+ + + + DR +W +EG W T++ RA V WSP N A S
Sbjct: 22 VAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASF 81
Query: 119 AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
T CI ++++N+ + + + H++ V VAW P+ LAT S D
Sbjct: 82 DATTCI--WKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRD 126
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 180 (68.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 58/225 (25%), Positives = 98/225 (43%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + I+K Q+ +E + L+ H+ V + W+ N + T S D+
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 77 NSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +VW E E+ V+ + V W P + A S TV + Y++E + WV
Sbjct: 128 SVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKL--YQEEGDDWV 185
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
+ H+S+V S+A+ P+ LA+ S D R++ ++ G E+ S +
Sbjct: 186 CCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPG---NEQGVACSGSDPSWK 242
Query: 196 QILQLD-LSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP 238
I L + V W LA G +++ F +D G P
Sbjct: 243 CICTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDP 287
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDW 62
+ H ++C AW+P ++A C + ++ I+ + W VL + H + V + W
Sbjct: 11 VPAHPDSRCWFL-AWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAW 69
Query: 63 SVRSNRIVTVSHDRNSYVW--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
S N + + S D + +W NQ+ E V TL V W+P N A S K
Sbjct: 70 SPCGNYLASASFDATTCIWKKNQDDFECVTTLE--GHENEVKSVAWAPSGNLLATCSRDK 127
Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+V + ++E+ + ++ H V V WHP+ LA+ S D +++
Sbjct: 128 SVWVWEVDEEDEYECVSVLSS-HTQDVKHVVWHPSQELLASASYDDTVKLY 177
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 178 (67.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 57/225 (25%), Positives = 98/225 (43%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + I+K Q+ +E + L+ H+ V + W+ N + T S D+
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 77 NSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +VW E E+ V+ + V W P + A S TV + Y++E + WV
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL--YQEEGDDWV 185
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
+ H+S+V S+A+ P+ LA+ S D R++ ++ G E+ S +
Sbjct: 186 CCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPG---NEQGVACSGSDPSWK 242
Query: 196 QILQLD-LSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP 238
+ L + V W LA G +++ F +D G P
Sbjct: 243 CVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDP 287
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDW 62
+ H ++C AW+P ++A C + ++ I+ + W VL + H + V + W
Sbjct: 11 VPAHPDSRCWFL-AWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAW 69
Query: 63 SVRSNRIVTVSHDRNSYVW--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
S N + + S D + +W NQ+ E V TL V W+P N A S K
Sbjct: 70 SPCGNYLASASFDATTCIWKKNQDDFECVTTLE--GHENEVKSVAWAPSGNLLATCSRDK 127
Query: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+V + ++E+ + ++ H V V WHP+ LA+ S D +++
Sbjct: 128 SVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASASYDDTVKLY 177
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 178 (67.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 59/225 (26%), Positives = 102/225 (45%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + I+K ++ +E + L+ H+ V + W+ N + T S D+
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 77 NSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +VW E E+ V+ + V W P + A S TV + Y E+E++W V
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL-YREEEDDW-V 185
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
+ H+S+V S+A+ P+ LA+ S D R++ ++ G + G+ + K
Sbjct: 186 CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKC-- 243
Query: 196 QILQLDLSFSWA-FGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP 238
+ L S + V W TLA G +++ F +D G P
Sbjct: 244 -VCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDP 287
Score = 167 (63.8 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL-QKHDQIVSG 59
++ I H ++C AW+P ++A C + V I+ + W VL + H + V
Sbjct: 8 LSRILAHPDSRCWFL-AWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRK 66
Query: 60 IDWSVRSNRIVTVSHDRNSYVW--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS 117
+ WS N + + S D + +W N++ E V TL V W+P N A S
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLE--GHENEVKSVAWAPSGNLLATCS 124
Query: 118 GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
K+V + ++E+ + ++ H V V WHP+ LA+ S D +++
Sbjct: 125 RDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASASYDDTVKLY 177
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 170 (64.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/169 (24%), Positives = 73/169 (43%)
Query: 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDW 62
++ H ++C AW+P +A C + + I+ + WE VL H + V + W
Sbjct: 11 VSAHPDSRCWYV-AWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAW 69
Query: 63 SVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
S + + S D + +W + ++ V+ CV W+P + A S K+V
Sbjct: 70 SPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSV 129
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
I ++E+ + ++ H V V WHP LA+ S D K ++
Sbjct: 130 WIWEVDEEDEYECLSVVNS-HTQDVKHVVWHPTQELLASASYDNKICIY 177
Score = 159 (61.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + I+K E +E L VL+ H+ V + W+ + + T S D+
Sbjct: 68 AWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDK 127
Query: 77 NSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ ++W E E+ V+ + V W P + A S +CI Y++E++ W
Sbjct: 128 SVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICI--YKEEDDDWE 185
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKG 177
+ + H+S+V S+ + P LA+ S D +++ G
Sbjct: 186 CRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTG 227
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVLQKHDQIVSGIDWSVRSNRIVT 71
+ C AW+P +++A C + V I+++ +E ++E L V+ H Q V + W + +
Sbjct: 108 VKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLAS 167
Query: 72 VSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYE--- 128
S+D ++ +E +W + + + P+ + A S +TV I
Sbjct: 168 ASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTG 227
Query: 129 ---QENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ +W + H ++ +AW LAT D RVFS
Sbjct: 228 DGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFS 274
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 39/180 (21%), Positives = 73/180 (40%)
Query: 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR 65
V+ Q + W P ++A +N++ IYK + WE L+ H+ V + +
Sbjct: 146 VNSHTQDVKHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPE 205
Query: 66 SNRIVTVSHDRNSYVWNQ----EGSE---WVPTLVILRLN-RAALCVQWSPKENKFAVGS 117
R+ + S DR +W + +GS W + + R + W A
Sbjct: 206 GRRLASCSDDRTVKIWKESTTGDGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATAC 265
Query: 118 GAKTVCICYYE-----QENNWWVSKLIRKRHDSSVTSVAWHPNNV-FLATTSTDGKCRVF 171
G V + + ++ + +S + K H+ V V+W+P LAT S +G+ ++
Sbjct: 266 GDDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIW 325
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/225 (25%), Positives = 99/225 (44%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + I+K Q+ +E + L+ H+ V + W+ N + T S D+
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 77 NSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +VW E E+ V+ + V W P + A S TV + Y E+E++W V
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL-YREEEDDW-V 185
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
+ H+S+V S+A+ P+ LA+ S D R++ ++ G E+ S +
Sbjct: 186 CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG---NEQGVACSGSDPSWK 242
Query: 196 QILQLDLSFSWA-FGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP 238
I L S + + W LA G +++ F +D P
Sbjct: 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDP 287
Score = 169 (64.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/174 (25%), Positives = 77/174 (44%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSG 59
+ + H ++C AW+P ++A C + + I+ + W VL + H + V
Sbjct: 8 LGRVPAHPDSRCWFL-AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRK 66
Query: 60 IDWSVRSNRIVTVSHDRNSYVW--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS 117
+ WS N + + S D + +W NQ+ E V TL V W+P N A S
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE--GHENEVKSVAWAPSGNLLATCS 124
Query: 118 GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
K+V + ++E+ + ++ H V V WHP+ LA+ S D +++
Sbjct: 125 RDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASASYDDTVKLY 177
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 169 (64.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 39/172 (22%), Positives = 76/172 (44%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL-QKHDQIVSG 59
++ ++ H ++C AW+P ++A C + + I+ + W VL + H + V
Sbjct: 8 LSRVSAHPDSRCWFL-AWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRK 66
Query: 60 IDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119
+ WS N + + S D + +W ++ E+ + V W+P + A S
Sbjct: 67 VSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRD 126
Query: 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
K+V + ++E + ++ H V V WHPN LA+ S D +++
Sbjct: 127 KSVWVWEVDEEEEYECVSVLNS-HTQDVKHVVWHPNQELLASASYDDSVKLY 177
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 53/225 (23%), Positives = 98/225 (43%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
+WSP +A + I+ +E++E + L+ H+ V + W+ + + T S D+
Sbjct: 68 SWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDK 127
Query: 77 NSYVWNQEGSEWVPTLVILRLNRAALC-VQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +VW + E + +L + + V W P + A S +V + Y E+E++W V
Sbjct: 128 SVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKL-YREEEDDW-V 185
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
+ H S+V S+A+ LAT S D R++ G ++G+ SD +
Sbjct: 186 CCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTG------EQGSKSDPNWKC 239
Query: 196 QILQLDLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSPL 239
+ V W+ +A G +++ F +D G PL
Sbjct: 240 VCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIFEEDPGSDPL 284
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 166 (63.5 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 60/226 (26%), Positives = 101/226 (44%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + I+K ++ +E + L+ H+ V + W+ N + T S D+
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 77 NSYVWNQ--EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
+ +VW E PT V + ++ V W P + A S TV + Y E+E++W
Sbjct: 128 SVWVWEGTVENQPSDPTRVPYK-PQSMKKVLWHPSQELLASASYDDTVKL-YREEEDDW- 184
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194
V + H+S+V S+A+ P+ LA+ S D R++ ++ G + G+ K
Sbjct: 185 VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKC- 243
Query: 195 EQILQLDLSFSWA-FGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP 238
I L S + V W LA G +++ F +D G P
Sbjct: 244 --ICTLSGFHSRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDP 287
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 47/175 (26%), Positives = 75/175 (42%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL-QKHDQIVSG 59
+ I H ++C AW+P ++A C + V I+ + W VL + H + V
Sbjct: 8 LGRIPAHPDSRCWFL-AWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRK 66
Query: 60 IDWSVRSNRIVTVSHDRNSYVW--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS 117
+ WS N + + S D + +W N++ E V TL V W+P N A S
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNKDDFECVTTLE--GHENEVKSVAWAPSGNLLATCS 124
Query: 118 GAKTVCICYYEQENNWWVSKLIRKRHD-SSVTSVAWHPNNVFLATTSTDGKCRVF 171
K+V + EN S R + S+ V WHP+ LA+ S D +++
Sbjct: 125 RDKSVWVWEGTVENQ--PSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLY 177
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 167 (63.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 17 AWSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD 75
AW P + ++A ++ V I + I + WE L+ H+ V I WS N + T S D
Sbjct: 340 AWRPIERPVLAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRD 399
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAAL-CVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
++ ++W + L +L+ + + V W P E+ GS + IC++ + + W
Sbjct: 400 KSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNS--ICFWRDDGDDW 457
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG 166
+ H ++V ++A+ PN LA+ DG
Sbjct: 458 ALTCQLQGHTNTVWALAFSPNGNTLASADNDG 489
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/114 (26%), Positives = 55/114 (48%)
Query: 2 AAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVLQKHDQIVSGI 60
AA+ H+ + C AWS + +A C + V I++ ++ +++ L VLQ+H Q V +
Sbjct: 372 AALEGHENE--VKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVV 429
Query: 61 DWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFA 114
W + +V+ S+D + W +G +W T + + +SP N A
Sbjct: 430 TWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLA 483
Score = 43 (20.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 356 TSGLDGKIVTWDLESQEDLLNYHL 379
++G DGKIV + E ++ L +H+
Sbjct: 547 SAGGDGKIVVYQREKHDEAL-WHV 569
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 158 (60.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 42/171 (24%), Positives = 80/171 (46%)
Query: 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIV 70
Q I C W P+ ++A ++ + +K I WE ++ L H+ + + ++ +++V
Sbjct: 161 QDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLV 220
Query: 71 TVSHDRNSYVW--NQEGSEWVPTLVILRLN-RAALCVQWSPKENKFAVGSGAKTVCICYY 127
+ D+ W ++E +W+ N R + WS N GS + I +Y
Sbjct: 221 SCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDS--IIFY 278
Query: 128 EQENNWWVSK---LIRKR--HDSSVTSVAWHPN--NVFLATTSTDGKCRVF 171
EQE++ K +++K+ HDS V W+P N+ LA+ DG +++
Sbjct: 279 EQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNI-LASCGDDGFIKIW 328
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 17 AWSPDHAMVAFCPNNNEVHIY-KLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD 75
AW P+ ++A C N+ + I+ K KW + L+ H++ V + WS + S D
Sbjct: 31 AWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFD 90
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRA--ALCVQWSPKENKFAVGSGAKTVCICYYEQENNW 133
++ +W + E T V V W A S K++ I E +N++
Sbjct: 91 ASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDF 150
Query: 134 WVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
I H + V WHPN LA++S D
Sbjct: 151 ECLS-INSGHGQDIKCVLWHPNEELLASSSYD 181
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 157 (60.3 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AWSP+ ++A C + + I+ +KW +L+ H + + + WS + + S D
Sbjct: 12 AWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGTFLASASFD 71
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W+Q+ E+ + V WS + A K+V I ++++ +
Sbjct: 72 ATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYEC 131
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+ +I H V V WHP LA+ S D +++
Sbjct: 132 ASVIHS-HTQDVKKVVWHPTKEILASCSYDDTIKLY 166
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRS 66
HQ + I WSP +A + I+ ++E L+ H+ V +DWSV
Sbjct: 49 HQ--RTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSG 106
Query: 67 NRIVTVSHDRNSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCIC 125
+ + T D++ ++W QE E+ VI + V W P + A S T+ +
Sbjct: 107 SLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKL- 165
Query: 126 YYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKG 177
Y E E++W + + H+S+V S+++ + + + S D R++ ++ G
Sbjct: 166 YKEDEDDWSCCDTL-EGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPG 216
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 36/144 (25%), Positives = 61/144 (42%)
Query: 3 AIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDW 62
A +H Q + W P ++A C ++ + +YK ++ W L+ H+ V I +
Sbjct: 132 ASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISF 191
Query: 63 SVRSNRIVTVSHDRNSYVW------NQEG-------SEWVPTLVILRLN-RAALCVQWSP 108
+RIV+ S D+ +W NQEG ++W V+ + R V WS
Sbjct: 192 DGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSK 251
Query: 109 KENKFAVGSGAKTVCICYYEQENN 132
A SG CI ++++ N
Sbjct: 252 VSGLIATASGDD--CIRIFKEDTN 273
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 53 HDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWV-PTLVILRLNRAALCVQWSPKEN 111
H+ V + WS + + D+ +W +EG +W+ T++ R + WSP
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGT 63
Query: 112 KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
A S T CI ++Q++ + + H++ V SV W + LAT D
Sbjct: 64 FLASASFDATTCI--WDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRD 115
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/168 (25%), Positives = 80/168 (47%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A C + + I+ +E + L+ H+ V ++WS + + S D+
Sbjct: 52 AWSPCGNYLASCSFDATICIWSKKDGDFECMATLEGHENEVKCVNWSSSGVYLASCSRDK 111
Query: 77 NSYVWN--QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
++++W +E E+ V+ ++ V WSPKEN S T+ I Y E +++W
Sbjct: 112 SAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNTIKI-YKEVDDDWE 170
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGV-DIK 181
S + H+S+V S+++H + + D +++ G D+K
Sbjct: 171 CSHTLIG-HESTVWSLSFHSSGELFVSCGDDKVLKIWKCLKSGPSDVK 217
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/178 (23%), Positives = 73/178 (41%)
Query: 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE--KWEKLHVLQKHDQIVS 58
MA + H+ + C WS +A C + I++ I+E ++E VL H Q V
Sbjct: 82 MATLEGHENE--VKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVK 139
Query: 59 GIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG 118
+ WS + N +V+ S+D ++ + +W + ++ + + F
Sbjct: 140 HVVWSPKENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGD 199
Query: 119 AKTVCI--CYYEQENNW-WVSKL-IRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
K + I C ++ W+S I H+ + V W N +AT D R+FS
Sbjct: 200 DKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIFS 257
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/162 (24%), Positives = 67/162 (41%)
Query: 18 WSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
WSP ++A+V+ +N + IYK + + WE H L H+ V + + V+ D+
Sbjct: 143 WSPKENALVS-ASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGDDK 201
Query: 77 NSYVWN--QEGS---EWVPTLVILRL-NRAALCVQWSPKENKFAVGSGAKTVCICYYEQE 130
+W + G +W+ I NR V WS NK A G + I +
Sbjct: 202 VLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIFSIVRI 261
Query: 131 NNWWVSKLI----RKRHDSSVTSVAWHPNNVFLATTSTDGKC 168
++L+ + H+ V V WHP + + +D C
Sbjct: 262 TISISNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNC 303
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 152 (58.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/157 (25%), Positives = 66/157 (42%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWE-KLHVLQKHDQIVSGIDWSVRSNRIVTVSHD 75
AW+P ++A C + + ++ L W K +L H + V G+ WS + + S D
Sbjct: 20 AWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSNCGRYLASSSFD 79
Query: 76 RNSYVWNQEGSEWVPTLVIL-RLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
+ +W ++ + + N C WSP A S KTV I ++ +
Sbjct: 80 GTTCIWRRQDDTFESCATLEGHENEVKAC-GWSPSGRFLATCSRDKTVWIWEVGEDEEFE 138
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+ ++ H V V WHP+ LA+ S D R F
Sbjct: 139 CAS-VQTCHSQDVKKVLWHPDRDELASASYDNTIRFF 174
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/194 (25%), Positives = 84/194 (43%)
Query: 43 KWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLN-RAA 101
K KL L+ H+ V + W+ + + D++ +W EG WV V+L + R
Sbjct: 2 KMSKLSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTV 61
Query: 102 LCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161
V WS A S T CI + ++++ + S + H++ V + W P+ FLAT
Sbjct: 62 RGVSWSNCGRYLASSSFDGTTCI--WRRQDDTFESCATLEGHENEVKACGWSPSGRFLAT 119
Query: 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAY 221
S D ++ G D E+ E S T + + + V W P + LA
Sbjct: 120 CSRDKTVWIWEV---GED--EEFECASVQTCHSQDVKK----------VLWHPDRDELAS 164
Query: 222 VGHNSMI-YFVDDV 234
+++ I +F ++V
Sbjct: 165 ASYDNTIRFFCEEV 178
Score = 132 (51.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 39/169 (23%), Positives = 67/169 (39%)
Query: 14 TCHA-------WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRS 66
TCH+ W PD +A +N + + + W+ L KH V G+ +
Sbjct: 144 TCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGP 203
Query: 67 N-RIVTVSHDRNSYVWNQEGSE--WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVC 123
++ + + D + YVW +G W + R R V W A G V
Sbjct: 204 EPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVR 263
Query: 124 ICYYEQEN-NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+ + + +W + + + H V SV+W P+ LA+ DG R++
Sbjct: 264 VFVKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLW 312
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 49/213 (23%), Positives = 82/213 (38%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQ-EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
WSP +A C + V I+++ + E++E V H Q V + W + + + S+D
Sbjct: 110 WSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDN 169
Query: 77 NSYVWNQEGSEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWV 135
+ +E +W + + + + P E + A + +V + + + W
Sbjct: 170 TIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWE 229
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
+RH V V+W FLAT D RVF K+G + G
Sbjct: 230 LCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFV-----------KDGGDCSWRLGC 278
Query: 196 QILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228
+ Q V WSPSG LA G + +
Sbjct: 279 TLTQAHSQD--VNSVSWSPSGGLLASAGDDGYV 309
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 49/222 (22%), Positives = 91/222 (40%)
Query: 8 QFAQCITCH-------AWSPDHAMVAFCPNNNEVHIY-KLIQEKWEKLHVLQK-HDQIVS 58
+ QC+T H W P ++A C + + I+ + ++W VL H + +
Sbjct: 5 ELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIR 64
Query: 59 GIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG 118
+ WS + + S D +W+++ E+ + V WS + A S
Sbjct: 65 DVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSR 124
Query: 119 AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGV 178
K+V + QE+ + + ++ H V V WHP+ LA+ S D +++
Sbjct: 125 DKSVWVWEVAQEDEYECAAVLNT-HTQDVKKVEWHPHEDILASASYDNTIKLYKE----- 178
Query: 179 DIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLA 220
D+ + + +S DT + S W+ + + SGN LA
Sbjct: 179 DLADS-DWSSFDTLVSHE------STVWS--ISFDGSGNRLA 211
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 50/225 (22%), Positives = 94/225 (41%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + V I+ ++E L+ H+ V + WS + + T S D+
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 77 NSYVWN-QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +VW + E+ V+ + V+W P E+ A S T+ + + ++ W
Sbjct: 127 SVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWS 186
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
S H+S+V S+++ + LA+ S D +++ + G E +T +
Sbjct: 187 SFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPG---NEFGVSCPDNTPVWK 243
Query: 196 QILQLDLSFSWA-FGVKWSPSGNTLAYVGHNSMIYFVDDV-GPSP 238
+ L S + + + W LA + M+ +V G SP
Sbjct: 244 CVCTLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFKEVEGSSP 288
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 43 KWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSE-WVPTLVILR-LNRA 100
K E L L H G W + N + T D+ +W ++ S+ WV V+ +R
Sbjct: 3 KLELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRT 62
Query: 101 ALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLA 160
V WSP A S TV I +++++ + + H++ V SV+W + LA
Sbjct: 63 IRDVAWSPCGQYLASASFDATVAI--WDKKSGEFECNATLEGHENEVKSVSWSKSGSLLA 120
Query: 161 TTSTD 165
T S D
Sbjct: 121 TCSRD 125
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 35/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++++
Sbjct: 141 AAVLNS-HTQDVKRVVWHPTKEILASASYDNTIKMYA 176
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ +W+ G+ W T++ R +QW
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 36/157 (22%), Positives = 61/157 (38%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNP-HTQDVKRVVWHPTKEILASASYDNTIKMFA 176
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ +W+ G+ W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRD 124
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 36/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNP-HTQDVKRVVWHPTKDILASASYDNTIKMFA 176
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ +W+ G+ W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 141 (54.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 36/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNP-HTQDVKRVVWHPTKDVLASASYDNTIKMFA 176
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ +W+ G+ W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 140 (54.3 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 35/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++++
Sbjct: 141 AAVLNS-HTQDVKRVVWHPTKEVLASASYDNTIKMYA 176
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ +W+ GS W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 140 (54.3 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 35/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + ++ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNA-HTQDVKRVVWHPTKDILASASYDNTIKMFA 176
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ VW+ G+ W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 140 (54.3 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 35/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + ++ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNA-HTQDVKRVVWHPTKDILASASYDNTIKMFA 176
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ VW+ G+ W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 140 (54.3 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
AWSP +A + V I+ ++E L+ H+ V + WS + T S D+
Sbjct: 67 AWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDK 126
Query: 77 NSYVWN--QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
+ ++W QE E+ V+ ++ V+W P E+ A S T+ + + ++ W
Sbjct: 127 SVWIWEVAQE-DEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDW 185
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKG 177
S HDS+V S+A+ + LA+ S D R++ + G
Sbjct: 186 SSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPG 228
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/170 (22%), Positives = 67/170 (39%)
Query: 11 QCITCH-------AWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVLQK-HDQIVSGID 61
QC++ H W P ++A C + + I+ +W VL H + + +
Sbjct: 8 QCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVA 67
Query: 62 WSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT 121
WS + + S D +W++ E+ + V WS A S K+
Sbjct: 68 WSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKS 127
Query: 122 VCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
V I QE+ + + ++ H V V WHPN LA+ S D +++
Sbjct: 128 VWIWEVAQEDEYECAAVLNT-HSQDVKKVEWHPNEDVLASASYDNTIQLY 176
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 35/121 (28%), Positives = 52/121 (42%)
Query: 47 LHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS-EWVPTLVILRLN-RAALCV 104
L L H V G W R + T D+ +W +G+ WVP V+ + R V
Sbjct: 7 LQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDV 66
Query: 105 QWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164
WSP A S TV I +++ + + + H++ V SV+W + LAT S
Sbjct: 67 AWSPCGRFLASASFDATVAI--WDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSR 124
Query: 165 D 165
D
Sbjct: 125 D 125
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 61/292 (20%), Positives = 112/292 (38%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82
+A C ++ V I+ + + L+ H+ V + W+ + N + + S+DR +W
Sbjct: 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK 87
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKF--AVGSGAKTVCICYYEQENNWWVSKLIR 140
+E W T + + V W+P + A GS + + Y + W V K I
Sbjct: 88 EENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKK-IS 146
Query: 141 KRHDSSVTSVAWHPNNV--FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL 198
H +V+W P V L + K F G K D ++ E+
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEDGQWKEE-Q 205
Query: 199 QLDLSFSWAFGVKWSPS-G---NTLAYVGHNSMIYF--VDDVGPSPLAQNVA--FRDLPL 250
+L+ W V W+PS G +T+A + ++ DD S + + F D+
Sbjct: 206 KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGSSWSPKLLHKFNDVVW 265
Query: 251 RDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQ 302
++ ++ G D ++ G+W I +++ + S G Q
Sbjct: 266 HVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVPEGQQ 317
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 GTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNP-HTQDVKRVVWHPTKELLASASYDNTIKMFA 176
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00057
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALC-VQW 106
H LQ H + G+ W + N + D+ +W+ G+ W ++ ++ + ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDGTTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/157 (22%), Positives = 62/157 (39%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P + A C + + I+ L W +L H + + I WS + + S D
Sbjct: 21 AWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E+ + V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 140
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 141 AAVLNP-HTQDVKRVVWHPTKDVLASASYDNTIKMFA 176
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-VPTLVILRLNRAALCVQW 106
H LQ H + G+ W + N + D+ +W+ G+ W T++ R ++W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + + + + H++ V SV+W + LAT S D
Sbjct: 68 SPCGQYLASASFDATTAI--WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 36/182 (19%), Positives = 78/182 (42%)
Query: 2 AAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK-WEKLHVLQKHDQIVSGI 60
A +++ + C AW P ++A C + V +++ E+ + + VLQ H Q V +
Sbjct: 100 ALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSV 159
Query: 61 DWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
W +V+ S+D V+ +E +W + + ++SP + A S
Sbjct: 160 AWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASCSDDL 219
Query: 121 TVCICYYE----QENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIK 176
V + +E + ++W + H ++ + W P++ LA+ +D + ++
Sbjct: 220 CVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNRLCIYKMPAN 279
Query: 177 GV 178
G+
Sbjct: 280 GL 281
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 57/245 (23%), Positives = 100/245 (40%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQE----KWEKLHVLQKHDQIVSGIDWSVRSNR 68
I C WSP +A + V I+K+ + + E L L+ H V + W +
Sbjct: 63 IRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHL 122
Query: 69 IVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAAL-CVQWSPKENKFAVGSGAKTVCICYY 127
I T D++ ++W + E V + +L+ + + V W P + V + Y
Sbjct: 123 IATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHP-HGEVLVSTSYDNKINVYR 181
Query: 128 EQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGT 187
E+ ++W V + HDS+V + P+ LA+ S D +++S +GV K
Sbjct: 182 EELDDWTVFAQL-SGHDSTVWKAEFSPSGDILASCSDDLCVKLWSW--EGVCGKSSSWMC 238
Query: 188 SSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSM--IYFVDDVGPSPLAQNVAF 245
+ T G + F + WSP LA G ++ IY + G + + F
Sbjct: 239 IA-TLSGYHTRTI-------FDLNWSPDSQLLASCGSDNRLCIYKMPANGLTHIGGKPCF 290
Query: 246 RDLPL 250
+ P+
Sbjct: 291 EEPPV 295
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 17 AWSPDHAMVAFCPNNNEVHIY-KLIQEKWEKLHVL-QKHDQIVSGIDWSVRSNRIVTVSH 74
+W+ +++ + + ++ K + W L + H + + + WS I + S
Sbjct: 21 SWNHKGSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVTWSPCGTYIASASF 80
Query: 75 DRNSYVWNQEGSEWVP---TLVILRLNRAAL-CVQWSPKENKFAVGSGAKTVCICYYEQE 130
D +W + P LV L + + + CV W P + A K+V + ++ E
Sbjct: 81 DGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDE 140
Query: 131 NNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+ +++ H V SVAWHP+ L +TS D K V+
Sbjct: 141 EDVQCVSVLQP-HSQDVKSVAWHPHGEVLVSTSYDNKINVY 180
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 39/161 (24%), Positives = 69/161 (42%)
Query: 17 AWSPDHAMVAFCPNNNEVHIY-KLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSH 74
AW P + A C + + ++ K ++W VL H + + + WS + + + S
Sbjct: 21 AWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAWSCCGHYLASASF 80
Query: 75 DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI--CYY--EQE 130
D VW+++ E+ + + V WS N A S K+V I ++ +QE
Sbjct: 81 DTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQE 140
Query: 131 NNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+ + ++ H V V WHP LA+ S D R++
Sbjct: 141 DEYECVAVLNG-HTQDVKKVCWHPQEDLLASASYDNTIRMY 180
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 18 WSPDHAMVAFCPNNNEVHIYK--LIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD 75
W P ++A +N + +Y+ L +WE L L+ H V I + R+ + S D
Sbjct: 161 WHPQEDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSED 220
Query: 76 RNSYVWNQEGSE 87
VW Q G +
Sbjct: 221 TTVKVWQQYGPD 232
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 98 NRAALCVQWSPKENKFAVGSGAKTVCICYY--EQENNWWVSKLIR--KRHDSSVTSVAWH 153
+R+ + W + A G TV I + + N +L+ + H VAWH
Sbjct: 257 SRSVYDIDWCKQTGLLATACGDDTVRIFREASDSDRNEPTFELVVTVEAHSQDANKVAWH 316
Query: 154 PNNV-FLATTSTDGKCRVF 171
P L T S DG+ +++
Sbjct: 317 PTVPGLLLTASDDGEIKLW 335
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/227 (22%), Positives = 97/227 (42%)
Query: 14 TCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS 73
+C AWSP ++A + I+K ++E + L+ H+ V + W+ + + T S
Sbjct: 79 SC-AWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCS 137
Query: 74 HDRNSYVWNQ-EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN 132
D++ ++W EG+E+ V+ + VQW P + S T+ + + E ++
Sbjct: 138 RDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDG 197
Query: 133 WW--VSKLIRKR--HDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS 188
+ V L H S+V S++++ + T S D +++ G DI + + G
Sbjct: 198 EYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW-----GTDIAKMQSGE- 251
Query: 189 SDTKFGEQILQLDLSF---SWAFGVKWSPSGNTLAYVGHNSMIYFVD 232
++ I LS + WS + G N++ FVD
Sbjct: 252 ---EYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVD 295
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/165 (26%), Positives = 67/165 (40%)
Query: 17 AWSP--DHA-----MVAFCPNNNEVHIYKL--IQEKWEKLHVLQK-HDQIVSGIDWSVRS 66
AW+P HA ++A C +N V I++ + W VL++ H + V WS
Sbjct: 27 AWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSG 86
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
+ T S D + +W GSE+ + V W+ + A S K+V I +
Sbjct: 87 QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWI-W 145
Query: 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
E N + + H V V WHP L + S D +V+
Sbjct: 146 EVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 63/236 (26%), Positives = 103/236 (43%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
A+SPD +A + ++ I+ + Q++ +L L H+Q + +D+S +V+ S DR
Sbjct: 353 AFSPDGKYLATGVEDQQIRIWDIAQKRVYRL--LTGHEQEIYSLDFSKDGKTLVSGSGDR 410
Query: 77 NSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVS 136
+W+ E E +IL + V +SP A GS K + I + V
Sbjct: 411 TVCLWDVEAGE---QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW---TSSGTLVE 464
Query: 137 KLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFST-FIKGVDIKEKKEGTSSDTKF-G 194
+L H+ SV SVA+ P+ +L + S D +++ + V KEG F G
Sbjct: 465 QL--HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 522
Query: 195 EQILQLDLSFS----WAF-GVK------WSPSG--NTLAYVGHNSMIYFVDDVGPS 237
+ L ++ S W G K WSP + L GHN+ + V V P+
Sbjct: 523 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA-VSPN 577
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 43/164 (26%), Positives = 70/164 (42%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQ--EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH 74
AWS D +A C + V I++ + E++E + VLQ+H Q V + W + + S+
Sbjct: 114 AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173
Query: 75 DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA--KTVCICYY----E 128
D +W +W V+ + E F + SG+ TV + Y E
Sbjct: 174 DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233
Query: 129 QENNWWVSKLIRKR-HDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
+ WV + I H V +VAW N + +A+ DG V+
Sbjct: 234 DDQQEWVCEAILPDVHKRQVYNVAWGFNGL-IASVGADGVLAVY 276
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 132 (51.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 66/298 (22%), Positives = 117/298 (39%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82
+A C ++ V I+ + + L+ H+ V + W+ + N + + S+DR +W
Sbjct: 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK 87
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKF--AVGSGAKTVCICYYEQENNWWVSKLIR 140
+E W T + + V W+P + A GS + + Y E W V K I
Sbjct: 88 EENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK-IN 146
Query: 141 KRHDSSVTSVAWHPNNV--FLATTSTDGKCRVFSTFIKG-VD--IKEKKEGTSSDTKFGE 195
H +V+W P V L + K F G D IK KE D ++ E
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKE--EEDGQWKE 204
Query: 196 QILQLDLSFSWAFGVKWSPS-G---NTLAYVGHNSMIYF--VDDVGPSPLAQNVA--FRD 247
+ +L+ W V W+PS G +T+A + ++ DD + + + F D
Sbjct: 205 E-QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDTSGNTWSPKLLHKFND 263
Query: 248 LPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSE 305
+ ++ ++ G D ++ G W I +++ + S S Q +E
Sbjct: 264 VVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVSASVTEGQQNE 321
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 69/286 (24%), Positives = 115/286 (40%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL------QKHDQIVSGIDWSVRS 66
+TC W ++A C ++ V ++ L+ E K+ + H + V + +S
Sbjct: 22 MTC--WHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFSNDG 79
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
+V+ S D + V+ QE E+ + C +S + A S K+V
Sbjct: 80 KCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQ 139
Query: 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD--IKEKK 184
+++ ++ VS +++ H V VAWHP L + S D R F F G D ++K
Sbjct: 140 QDEDEDFSVSSILQP-HTQDVKQVAWHPTEDLLVSCSYDSSIR-FYRF-DGEDWVTQQKI 196
Query: 185 EGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIY-FV-DDVGPSPLAQN 242
+G T W+ + + G+ L VG + I FV +++G Q+
Sbjct: 197 DGCHVGTV-------------WS--IAFDTEGHRLVTVGEDHCIQLFVRENIGSKSADQD 241
Query: 243 ----VAFRDL-----PLRDVLFVSEKMVIGVGF-DCNPMVFAADET 278
VA D+ PL V + S VI G DC +F T
Sbjct: 242 TWKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKISST 287
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 69/286 (24%), Positives = 115/286 (40%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL------QKHDQIVSGIDWSVRS 66
+TC W ++A C ++ V ++ L+ E K+ + H + V + +S
Sbjct: 22 MTC--WHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFSNDG 79
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
+V+ S D + V+ QE E+ + C +S + A S K+V
Sbjct: 80 KCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQ 139
Query: 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD--IKEKK 184
+++ ++ VS +++ H V VAWHP L + S D R F F G D ++K
Sbjct: 140 QDEDEDFSVSSILQP-HTQDVKQVAWHPTEDLLVSCSYDSSIR-FYRF-DGEDWVTQQKI 196
Query: 185 EGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIY-FV-DDVGPSPLAQN 242
+G T W+ + + G+ L VG + I FV +++G Q+
Sbjct: 197 DGCHVGTV-------------WS--IAFDTEGHRLVTVGEDHCIQLFVRENIGSKSADQD 241
Query: 243 ----VAFRDL-----PLRDVLFVSEKMVIGVGF-DCNPMVFAADET 278
VA D+ PL V + S VI G DC +F T
Sbjct: 242 TWKSVARYDVENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKISST 287
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 42 EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN--QEGSEWVPTLVILRLNR 99
++W +L HD V + WS + T S D++ ++W ++G T+ +++ +
Sbjct: 134 DEWRFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHE 193
Query: 100 AAL-CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP-NNV 157
+ CV W P E A GS T+ I + E ++W I K H +V + W NV
Sbjct: 194 GDVKCVAWHPAEECLASGSYDDTIRI-WREDIDDWGQVACI-KGHTGTVWGIDWEDAENV 251
Query: 158 FLATTS 163
+TS
Sbjct: 252 PFPSTS 257
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 126 (49.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 53/228 (23%), Positives = 96/228 (42%)
Query: 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSN 67
FA I AW+ D +A E + + + + H+++++ +D R
Sbjct: 101 FAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPY 160
Query: 68 RIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127
R+VT S D + + EG + I R CV++SP N+FA S + I Y
Sbjct: 161 RLVTGSDDNCAAFF--EGPPFKFKFTISDHGRFVNCVRFSPDGNRFATASADGQIFI--Y 216
Query: 128 EQENNWWVSKLI-RKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEG 186
+ + V L K HD + +++W P++ L + S D +++ + V + G
Sbjct: 217 DGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSV-VNTFTMG 275
Query: 187 TSS-DTKFG-----EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228
++ D + G + +L + LS + K +PS GH+ I
Sbjct: 276 SNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVIKGHSKSI 323
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 310 LYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369
L G Y N+ + R G H I C+ + G S I ++ S DG I WD E
Sbjct: 297 LSGYINYLDKNNPSKPLRVIKG-HSKSIQCLTVHKNGGKSYI--YSGSH-DGHINYWDSE 352
Query: 370 SQED 373
+ E+
Sbjct: 353 TGEN 356
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/122 (25%), Positives = 47/122 (38%)
Query: 258 EKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKT-SSSGPKYGSQFSE--AFGKLYGQS 314
E + +G G D N +++ + T +K DE K + GP FS AF + S
Sbjct: 458 ETVAVG-GADGNVRLYSI----LGTTLK--DEGKLLEAKGPVTDLAFSHDGAFLAVCDAS 510
Query: 315 K----YGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370
K + V D + G H + C+ A S F + G+D + W L
Sbjct: 511 KVVTVFSVA-DGYSENNVFYGHHAKIV-CL-----AWSPDNEHFASGGMDMMVYVWTLSD 563
Query: 371 QE 372
E
Sbjct: 564 PE 565
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 212 WSPSGNTLAYVGHNSMIY 229
WSP A G + M+Y
Sbjct: 540 WSPDNEHFASGGMDMMVY 557
>MGI|MGI:1337100 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=ISA] [GO:0015629
"actin cytoskeleton" evidence=ISA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1337100 GO:GO:0005737
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007605 HOVERGEN:HBG000780 CTD:9948
OrthoDB:EOG4WH8KB OMA:LKDQKKC ChiTaRS:WDR1 EMBL:AF020055
IPI:IPI00314748 RefSeq:NP_035845.1 UniGene:Mm.2654
UniGene:Mm.406120 ProteinModelPortal:O88342 SMR:O88342
STRING:O88342 PhosphoSite:O88342 REPRODUCTION-2DPAGE:IPI00314748
REPRODUCTION-2DPAGE:O88342 UCD-2DPAGE:O88342 PaxDb:O88342
PRIDE:O88342 Ensembl:ENSMUST00000005234 GeneID:22388 KEGG:mmu:22388
InParanoid:O88342 NextBio:302759 Bgee:O88342 CleanEx:MM_WDR1
Genevestigator:O88342 GermOnline:ENSMUSG00000005103 Uniprot:O88342
Length = 606
Score = 123 (48.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 52/228 (22%), Positives = 96/228 (42%)
Query: 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS-VRSN 67
FA I AW+ D +A E + + + + H+++++ +D R
Sbjct: 101 FAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQTRPY 160
Query: 68 RIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127
R+ T S D + + EG + I +R CV++SP N+FA S + I Y
Sbjct: 161 RLATGSDDNCAAFF--EGPPFKFKFTIGDHSRFVNCVRFSPDGNRFATASADGQIFI--Y 216
Query: 128 EQENNWWVSKLIR-KRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEG 186
+ + V L K HD + +++W P++ L + S D +++ + V + G
Sbjct: 217 DGKTGEKVCALGESKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSV-VSTFPMG 275
Query: 187 TSS-DTKFG-----EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228
++ D + G + +L + LS + K +PS GH+ I
Sbjct: 276 SNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVIKGHSKSI 323
Score = 53 (23.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 310 LYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369
L G Y N+ + R G H I C+ R G S I ++ S DG I WD E
Sbjct: 297 LSGYINYLDKNNPSKPLRVIKG-HSKSIQCLTVHRNGGKSYI--YSGSH-DGHINYWDSE 352
Query: 370 SQED 373
+ E+
Sbjct: 353 TGEN 356
Score = 38 (18.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 212 WSPSGNTLAYVGHNSMIY 229
WSP A G + M+Y
Sbjct: 540 WSPDNEHFASGGMDMMVY 557
Score = 37 (18.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 354 FTTSGLDGKIVTWDLESQE 372
F + G+D + W L E
Sbjct: 547 FASGGMDMMVYVWTLSDPE 565
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 65/298 (21%), Positives = 117/298 (39%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82
+A C ++ V I+ + + L+ H+ V + W+ + N + + S+DR +W
Sbjct: 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKF--AVGSGAKTVCICYYEQENNWWVSKLIR 140
+E W + + + V W+P + A GS + + Y E W V K I
Sbjct: 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK-IN 146
Query: 141 KRHDSSVTSVAWHPNNV--FLATTSTDGKCRVFSTFIKG-VD--IKEKKEGTSSDTKFGE 195
H +V+W P V L + K F G D IK KE D ++ E
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKE--EEDGQWKE 204
Query: 196 QILQLDLSFSWAFGVKWSPS-G---NTLAYVGHNSMIYF--VDDVGPSPLAQNVA--FRD 247
+ +L+ W V W+PS G +T+A + ++ DD + + + F D
Sbjct: 205 E-QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFND 263
Query: 248 LPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSE 305
+ ++ ++ G D ++ G W I +++ + S S Q +E
Sbjct: 264 VVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVSASVTEGQQNE 321
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 61/286 (21%), Positives = 111/286 (38%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82
+A C ++ V I+ + + L+ H+ V + W+ + N + + S+DR +W
Sbjct: 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK 87
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKF--AVGSGAKTVCICYYEQENNWWVSKLIR 140
+E W T + + V W+P + A GS + + Y E W V K I
Sbjct: 88 EENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK-IN 146
Query: 141 KRHDSSVTSVAWHPNNV--FLATTSTDGKCRVFSTFIKG-VDIKEKKEGTSSDTKFGEQI 197
H +V+W P V L + K F G D K D ++ E+
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE- 205
Query: 198 LQLDLSFSWAFGVKWSPS-G---NTLAYVGHNSMIYF--VDDVGPSPLAQNVA--FRDLP 249
+L+ W V W+PS G +T+A + ++ DD + + + F D+
Sbjct: 206 QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVV 265
Query: 250 LRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSS 295
++ ++ G D ++ G W I +++ + S S
Sbjct: 266 WHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVS 311
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 61/286 (21%), Positives = 111/286 (38%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82
+A C ++ V I+ + + L+ H+ V + W+ + N + + S+DR +W
Sbjct: 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK 87
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKF--AVGSGAKTVCICYYEQENNWWVSKLIR 140
+E W T + + V W+P + A GS + + Y E W V K I
Sbjct: 88 EENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK-IN 146
Query: 141 KRHDSSVTSVAWHPNNV--FLATTSTDGKCRVFSTFIKG-VDIKEKKEGTSSDTKFGEQI 197
H +V+W P V L + K F G D K D ++ E+
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE- 205
Query: 198 LQLDLSFSWAFGVKWSPS-G---NTLAYVGHNSMIYF--VDDVGPSPLAQNVA--FRDLP 249
+L+ W V W+PS G +T+A + ++ DD + + + F D+
Sbjct: 206 QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVV 265
Query: 250 LRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSS 295
++ ++ G D ++ G W I +++ + S S
Sbjct: 266 WHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVS 311
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 37/157 (23%), Positives = 61/157 (38%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P A C + + I+ L W +L H + + + WS + + S D
Sbjct: 21 AWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E TL V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKH--ECTATLE--GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 136
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++F+
Sbjct: 137 AAVLNA-HSQDVKRVVWHPTKEVLASASYDNTIKMFA 172
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 56/224 (25%), Positives = 95/224 (42%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SPD +A + + I+ K+E+ L+ H + +S I WS S I + S D+
Sbjct: 54 FSPDGKWLASASADKTIKIWGAYDGKFER--TLEGHKEGISDIAWSQDSKLICSASDDKT 111
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ E + V TL + V ++P+ N GS + V I N +K
Sbjct: 112 IKIWDVESGKMVKTLKGHK--EYVFGVSFNPQSNLIVSGSFDENVRIW---DVNTGECTK 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFST----FIKGVDIKEKKEGTSSDTKF 193
+I H VT V ++ + + + S DG R++ T + + ++ KE S KF
Sbjct: 167 MI-SAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE--VSFVKF 223
Query: 194 ---GEQILQLDLSFSWAFGVKWSPSGNTLA---YVGHNSMIYFV 231
G+ +L L + WS + N Y GH + Y +
Sbjct: 224 SPNGKFVLAGTLDNTLRL---WSYNNNKKCLKTYTGHKNEKYCI 264
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 36/157 (22%), Positives = 61/157 (38%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P A C + + I+ L W +L H + + + WS + + S D
Sbjct: 21 AWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E TL V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKH--ECTATLE--GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFEC 136
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP LA+ S D ++++
Sbjct: 137 AAVLNA-HSQDVKRVVWHPTKEILASASYDNTIKMYA 172
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 49/202 (24%), Positives = 88/202 (43%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS-VRSNRIV-TVSHDRNSYVWN 82
+A C ++ + I+++ E + + L H+ V +DW+ + I+ + S+D +W
Sbjct: 24 LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83
Query: 83 QEGSEWVPTLVILRLNRAAL-CVQWSPKENK--FAVGSGAKTVCICYYEQENNWWVSKLI 139
+E W + + ++ A++ VQW+P E V S V + +++ N S +I
Sbjct: 84 EENGRW-SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE--NGTTSPII 140
Query: 140 RKRHDSSVTSVAWHPNNVFLATTSTDGK---CRVFSTFIKG-VD--IKEKKEGTSSDTKF 193
H V S +W P AT DG+ + F+ G D +K K + + T
Sbjct: 141 IDAHAIGVNSASWAP-----ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV 195
Query: 194 GEQILQLDLSFSWAFGVKWSPS 215
E L+ W V WSP+
Sbjct: 196 LESTLEGHSD--WVRDVAWSPT 215
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 40/155 (25%), Positives = 68/155 (43%)
Query: 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS----V 64
F Q +T + + + C +N V I++ ++W + H L+ H V + W+ +
Sbjct: 199 FDQRVTSRSAAVKRLVSGGC--DNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGL 256
Query: 65 RSNRIVTVSHDRNSYVW--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 122
++I T S DR+ VW N + SEW T V+ + A + WS N AV G V
Sbjct: 257 PRSQIATASQDRHVIVWSSNADLSEWTST-VLHTFDDAVWSISWSTTGNILAVTGGDNNV 315
Query: 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV 157
+ E W IR ++S + P+++
Sbjct: 316 TLWKENTEGQW-----IRINYESGTAIQSKQPSHL 345
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 27 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 84
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 85 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 140
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS---SDTKF- 193
L H V++V ++ + + ++S DG CR++ T G +K + + S KF
Sbjct: 141 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFS 197
Query: 194 --GEQILQLDLSFSWAFGVKWSPS-GNTL-AYVGHNSMIYFV 231
G+ IL L + W S G L Y GH + Y +
Sbjct: 198 PNGKYILAATLDNTLKL---WDYSKGKCLKTYTGHKNEKYCI 236
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALC-VQW 106
H LQ H + G+ W + N + D+ +W+Q G+ W ++ ++ + V+W
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRW 67
Query: 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165
SP A S T I + + E N + L + H++ V SV+W + LAT S D
Sbjct: 68 SPCGEYLASASFDATTAI-WSKHECN---ATL--EGHENEVKSVSWSQSGGLLATCSRD 120
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 35/157 (22%), Positives = 61/157 (38%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHD 75
AW P A C + + I+ W +L H + + + WS + + S D
Sbjct: 21 AWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFD 80
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ +W++ E TL V WS A S K+V I ++ +
Sbjct: 81 ATTAIWSKH--ECNATLE--GHENEVKSVSWSQSGGLLATCSRDKSVWIWEVAGDDEFEC 136
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
+ ++ H V V WHP+ LA+ S D ++++
Sbjct: 137 AAVLNA-HTQDVKRVVWHPSKEILASASYDNTIKMYA 172
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 53 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 110
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 111 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS---SDTKF- 193
L H V++V ++ + + ++S DG CR++ T G +K + + S KF
Sbjct: 167 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFS 223
Query: 194 --GEQILQLDLSFSWAFGVKWSPS-GNTL-AYVGHNSMIYFV 231
G+ IL L + W S G L Y GH + Y +
Sbjct: 224 PNGKYILAATLDNTLKL---WDYSKGKCLKTYTGHKNEKYCI 262
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 53 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 110
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 111 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS---SDTKF- 193
L H V++V ++ + + ++S DG CR++ T G +K + + S KF
Sbjct: 167 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFS 223
Query: 194 --GEQILQLDLSFSWAFGVKWSPS-GNTL-AYVGHNSMIYFV 231
G+ IL L + W S G L Y GH + Y +
Sbjct: 224 PNGKYILAATLDNTLKL---WDYSKGKCLKTYTGHKNEKYCI 262
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 53 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 110
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 111 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS---SDTKF- 193
L H V++V ++ + + ++S DG CR++ T G +K + + S KF
Sbjct: 167 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFS 223
Query: 194 --GEQILQLDLSFSWAFGVKWSPS-GNTL-AYVGHNSMIYFV 231
G+ IL L + W S G L Y GH + Y +
Sbjct: 224 PNGKYILAATLDNTLKL---WDYSKGKCLKTYTGHKNEKYCI 262
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 53 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 110
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 111 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS---SDTKF- 193
L H V++V ++ + + ++S DG CR++ T G +K + + S KF
Sbjct: 167 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFS 223
Query: 194 --GEQILQLDLSFSWAFGVKWSPS-GNTL-AYVGHNSMIYFV 231
G+ IL L + W S G L Y GH + Y +
Sbjct: 224 PNGKYILAATLDNTLKL---WDYSKGKCLKTYTGHKNEKYCI 262
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 53 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 110
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 111 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTS---SDTKF- 193
L H V++V ++ + + ++S DG CR++ T G +K + + S KF
Sbjct: 167 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFS 223
Query: 194 --GEQILQLDLSFSWAFGVKWSPS-GNTL-AYVGHNSMIYFV 231
G+ IL L + W S G L Y GH + Y +
Sbjct: 224 PNGKYILAATLDNTLKL---WDYSKGKCLKTYTGHKNEKYCI 262
>RGD|1305789 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305789 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000009416
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 OrthoDB:EOG4WH8KB
EMBL:AY986483 EMBL:BC085864 IPI:IPI00215349 RefSeq:NP_001014157.1
UniGene:Rn.3168 HSSP:Q11176 ProteinModelPortal:Q5RKI0 STRING:Q5RKI0
PhosphoSite:Q5RKI0 World-2DPAGE:0004:Q5RKI0 PRIDE:Q5RKI0
Ensembl:ENSRNOT00000024012 GeneID:360950 KEGG:rno:360950
InParanoid:Q5RKI0 NextBio:674693 Genevestigator:Q5RKI0
Uniprot:Q5RKI0
Length = 606
Score = 120 (47.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 52/228 (22%), Positives = 96/228 (42%)
Query: 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSN 67
FA I AW+ D +A E + + + + H+++++ +D R
Sbjct: 101 FAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQNRPY 160
Query: 68 RIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127
R+ T S D + + EG + I +R CV++SP N+FA S + I Y
Sbjct: 161 RLATGSDDNCAAFF--EGPPFKFKFTIGDHSRFVNCVRFSPDGNRFATASADGQIFI--Y 216
Query: 128 EQENNWWVSKLI-RKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEG 186
+ + V L K HD + +++W P++ L + S D +++ + V + G
Sbjct: 217 DGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSV-VSTFPMG 275
Query: 187 TSS-DTKFG-----EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228
++ D + G + +L + LS + K +PS GH+ I
Sbjct: 276 SNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVIKGHSKSI 323
Score = 50 (22.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 310 LYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369
L G Y N+ + R G H I C+ + G S I ++ S DG I WD E
Sbjct: 297 LSGYINYLDKNNPSKPLRVIKG-HSKSIQCLTVHKNGGKSYI--YSGSH-DGHINYWDSE 352
Query: 370 SQED 373
+ E+
Sbjct: 353 TGEN 356
>CGD|CAL0001184 [details] [associations]
symbol:orf19.4395 species:5476 "Candida albicans" [GO:0003779
"actin binding" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043332 "mating projection tip" evidence=IEA]
[GO:0032153 "cell division site" evidence=IEA] [GO:0030042 "actin
filament depolymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001184 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AACQ01000090 RefSeq:XP_715171.1
ProteinModelPortal:Q5A045 STRING:Q5A045 GeneID:3643203
KEGG:cal:CaO19.4395 Uniprot:Q5A045
Length = 613
Score = 130 (50.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 57/232 (24%), Positives = 99/232 (42%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHD 75
AW D++ + E + + + +Q H ++ +D R R TV D
Sbjct: 117 AWDADNSRIIAVGQGKEKFGHAFSWDSGNSIGDIQGHSSPINAVDIKPQRPYRAATVGDD 176
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
+ ++ +L N V++SP + ++ V G+ V I Y+ + +V
Sbjct: 177 HALVFFTGPPFKFDKSLRGNH-NNVVRDVKFSP-DGEYIVSVGSDRV-IAIYQGKTGEFV 233
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195
K I K H+ + +VAW P++ T S D + ++ + G + +K E SS T G
Sbjct: 234 KK-IEKAHEGGIFAVAWLPDSKHFITASADNTLKKWT--LDGENT-QKFE-ISSTTSVGN 288
Query: 196 QILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD 247
Q Q+ L+ + F V S +GN L Y H + + SP+ + V F D
Sbjct: 289 Q--QVGLALTKEFVVSLSGNGN-LNYFDHEGNLVQIVQGHQSPITK-VEFHD 336
Score = 39 (18.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 354 FTTSGLDGKIVTWDL 368
F ++GLD I +W++
Sbjct: 597 FVSAGLDATIRSWNI 611
>UNIPROTKB|O75083 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=TAS] [GO:0002576 "platelet
degranulation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0030168 "platelet activation"
evidence=TAS] Reactome:REACT_604 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005576
GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0002576 GO:GO:0007605 EMBL:AC005674
HOVERGEN:HBG000780 CTD:9948 EMBL:AF020056 EMBL:AF020260
EMBL:AB010427 EMBL:AK291614 EMBL:AC093664 EMBL:BC000201
EMBL:BC002489 EMBL:BC030541 EMBL:AL050108 EMBL:AL110208
IPI:IPI00746165 IPI:IPI00903292 PIR:T13152 RefSeq:NP_005103.2
RefSeq:NP_059830.1 UniGene:Hs.128548 ProteinModelPortal:O75083
SMR:O75083 IntAct:O75083 STRING:O75083 PhosphoSite:O75083
OGP:O75083 REPRODUCTION-2DPAGE:IPI00746165
REPRODUCTION-2DPAGE:O75083 UCD-2DPAGE:O75083 PaxDb:O75083
PRIDE:O75083 Ensembl:ENST00000382451 Ensembl:ENST00000382452
Ensembl:ENST00000499869 Ensembl:ENST00000502702 GeneID:9948
KEGG:hsa:9948 UCSC:uc021xlv.1 UCSC:uc021xlw.1 GeneCards:GC04M010075
HGNC:HGNC:12754 HPA:CAB020804 MIM:604734 neXtProt:NX_O75083
PharmGKB:PA37358 OMA:LKDQKKC ChiTaRS:WDR1 GenomeRNAi:9948
NextBio:37534 ArrayExpress:O75083 Bgee:O75083 CleanEx:HS_WDR1
Genevestigator:O75083 GermOnline:ENSG00000071127 Uniprot:O75083
Length = 606
Score = 121 (47.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 51/227 (22%), Positives = 93/227 (40%)
Query: 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSN 67
FA I AW+ D +A E + + + + H+++++ +D R
Sbjct: 101 FAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPY 160
Query: 68 RIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127
R+ T S D + + EG + I +R CV++SP N+FA S + I Y
Sbjct: 161 RLATGSDDNCAAFF--EGPPFKFKFTIGDHSRFVNCVRFSPDGNRFATASADGQIYI--Y 216
Query: 128 EQENNWWVSKLI-RKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEG 186
+ + V L K HD + +++W P++ L + S D +++ + V
Sbjct: 217 DGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGS 276
Query: 187 TSSDTKFG-----EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228
T D + G + +L + LS + + +PS GH+ I
Sbjct: 277 TVLDQQLGCLWQKDHLLSVSLSGYINYLDRNNPSKPLHVIKGHSKSI 323
Score = 48 (22.0 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 333 HVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED 373
H I C+ + G S I ++ S DG I WD E+ E+
Sbjct: 319 HSKSIQCLTVHKNGGKSYI--YSGSH-DGHINYWDSETGEN 356
Score = 38 (18.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 212 WSPSGNTLAYVGHNSMIY 229
WSP A G + M+Y
Sbjct: 540 WSPDNEHFASGGMDMMVY 557
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 43/167 (25%), Positives = 74/167 (44%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK----HDQIVSGIDWSVRSNR 68
+ C A++P VA +N+ +Y L +K E L +K H +S ++ +
Sbjct: 111 MAC-AYAPSGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQ 169
Query: 69 IVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAA--LCVQWSPKE--NKFAVGSGAKTVCI 124
I+T S D +W+ E + + + AA LC+ +P E N F G K C+
Sbjct: 170 ILTSSGDGTCALWDVESGQMLQSFH----GHAADVLCLDLAPSETGNTFVSGGCDKKACV 225
Query: 125 CYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171
++ V + HDS + SV ++P+ A+ S D CR++
Sbjct: 226 --WDMRTGQCVQSF--ESHDSDINSVRYYPSGDAFASGSDDATCRLY 268
>WB|WBGene00000484 [details] [associations]
symbol:che-2 species:6239 "Caenorhabditis elegans"
[GO:0042384 "cilium assembly" evidence=IMP] [GO:0040024 "dauer
larval development" evidence=IGI] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IGI]
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0005198
"structural molecule activity" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0006935 GO:GO:0040024 GO:GO:0042384
GO:GO:0030512 GO:GO:0031513 OMA:WSRSGML
GeneTree:ENSGT00440000033499 EMBL:FO080171 EMBL:AJ011523
RefSeq:NP_508106.1 UniGene:Cel.19591 ProteinModelPortal:G5EGF0
SMR:G5EGF0 EnsemblMetazoa:F38G1.1.1 EnsemblMetazoa:F38G1.1.2
GeneID:180401 KEGG:cel:CELE_F38G1.1 CTD:180401 WormBase:F38G1.1
NextBio:909196 Uniprot:G5EGF0
Length = 760
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 44/160 (27%), Positives = 69/160 (43%)
Query: 8 QFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRS 66
QFA + C AW + V +C N H Y + K + + K HD I+ DW+ S
Sbjct: 143 QFATAVYCVAWDSTSSNVLYC---NADHCY-IKSLKMQVAPIKWKAHDGIILCCDWNPTS 198
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
+ IVT D VW+ G + V + + W+ FAVGS + +C
Sbjct: 199 DLIVTGGEDLKFKVWDGFGQILFNSSVH---DYPITSISWNTDGTLFAVGSH-NILRLC- 253
Query: 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG 166
++ W S + K + SV +++W P+ LA + G
Sbjct: 254 --DKSGW--SHSLEKMNAGSVMALSWSPDGTQLAVGTAAG 289
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 52/220 (23%), Positives = 87/220 (39%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
I C +++P +VA + ++ + + E++ L H + + ++ NRI+T
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDI--QSGEEVFTLTGHSAEIISLSFNTSGNRIITG 237
Query: 73 SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN 132
S D VW + V TL+ ++ W + GS KT + ++ N
Sbjct: 238 SFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC--SLILTGSMDKTCKL--WDAVNG 293
Query: 133 WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIK-EKKEGTSSDT 191
V+ L HD + + +AT S DG R+FS + K E EG S
Sbjct: 294 KCVATLTG--HDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 192 KFGEQILQLDLSFSWAFGVKW-SPSGNTLAYV-GHNSMIY 229
F Q +L S W + +G L + GH I+
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 49/200 (24%), Positives = 80/200 (40%)
Query: 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82
+A C ++ V I+ + + L+ H+ V + W+ + N + + S+DR +W
Sbjct: 28 LATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK 87
Query: 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKF--AVGSGAKTVCICYYEQENNWWVSKLIR 140
+E W T + + V W+P + A GS + + Y W V K I
Sbjct: 88 EENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKK-IN 146
Query: 141 KRHDSSVTSVAWHPNNV--FLATTSTDGKCRVFSTFIKG-VD--IKEKKEGTSSDTKFGE 195
H +V+W P V L + K F G D IK KE D ++ E
Sbjct: 147 NAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKE--EEDGQWKE 204
Query: 196 QILQLDLSFSWAFGVKWSPS 215
+ +L+ W V W+PS
Sbjct: 205 E-QKLEAHSDWVRDVAWAPS 223
>WB|WBGene00003806 [details] [associations]
symbol:npp-20 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/137 (21%), Positives = 59/137 (43%)
Query: 25 VAFCPNNNEVHIYKLIQEKWE-KLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVW 81
+A C ++ V I+++ + L H V + W+ + + S+D+ +W
Sbjct: 28 LATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
Query: 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT--VCICYYEQENNWWVSKLI 139
N++ W + CV ++P + + S + + I Y+ +N W+S I
Sbjct: 88 NEQQGRWQKAYEWAAHEASTTCVAFAPHQYGLMLASASADGDIGILRYDNSSNEWISSKI 147
Query: 140 RKRHDSSVTSVAWHPNN 156
+K H+ V SV W P +
Sbjct: 148 QKCHEQGVNSVCWAPGS 164
>UNIPROTKB|Q9N4A7 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051169 "nuclear transport" evidence=IC]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/137 (21%), Positives = 59/137 (43%)
Query: 25 VAFCPNNNEVHIYKLIQEKWE-KLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVW 81
+A C ++ V I+++ + L H V + W+ + + S+D+ +W
Sbjct: 28 LATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
Query: 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT--VCICYYEQENNWWVSKLI 139
N++ W + CV ++P + + S + + I Y+ +N W+S I
Sbjct: 88 NEQQGRWQKAYEWAAHEASTTCVAFAPHQYGLMLASASADGDIGILRYDNSSNEWISSKI 147
Query: 140 RKRHDSSVTSVAWHPNN 156
+K H+ V SV W P +
Sbjct: 148 QKCHEQGVNSVCWAPGS 164
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 50/206 (24%), Positives = 91/206 (44%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76
A+SPD + + ++ ++ L +K +V H+Q + +D+S IV+ S DR
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVR--YVFSGHEQDIYSLDFSHNGRFIVSGSGDR 424
Query: 77 NSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVS 136
+ +W+ E + + + L + + SP + AVGS + + + W VS
Sbjct: 425 TARLWDVETGQCI---LKLEIENGVTAIAISPNDQFIAVGSLDQIIRV--------WSVS 473
Query: 137 KLIRKR---HDSSVTSVAWHPNNVFLATTSTDGKCRVFST-FIKGVDIKE-KKEGTSSDT 191
+ +R H SV S+A+ P++ L + S D +V+ + V + K EG T
Sbjct: 474 GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT 533
Query: 192 KFGEQILQLDLSFSWAFGVKWSPSGN 217
G L ++ S +W SG+
Sbjct: 534 YTGHTDFVLSVAVSP--DSRWGLSGS 557
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 36/156 (23%), Positives = 73/156 (46%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
+SP+ +A + + I+ K+EK + H +S + WS SN +V+ S D+
Sbjct: 53 FSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKT 110
Query: 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSK 137
+W+ + + TL + C ++P+ N GS ++V I ++ + +
Sbjct: 111 LKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKT 166
Query: 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFST 173
L H V++V ++ + + ++S DG CR++ T
Sbjct: 167 L--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
>UNIPROTKB|F1P2D7 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0033186 "CAF-1 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:AADN02010795 IPI:IPI01017347 Ensembl:ENSGALT00000025844
Uniprot:F1P2D7
Length = 566
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 113 FAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
FAV S + +Y+ E ++ + H +++ ++W + FLA +STDG C F
Sbjct: 326 FAVASEDS---VLFYDTEQSFPFG-YVSNIHYHTLSDISWSSDGAFLAISSTDGYCS-FV 380
Query: 173 TFIK---GVDIKEKKE 185
TF K G+ +KEK +
Sbjct: 381 TFEKDELGIPLKEKPQ 396
Score = 79 (32.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
W+ D +A +N ++ ++ K +K+ +L +H V GI W I T+S DR
Sbjct: 137 WTSDGNYMASASVDNTAIMWDVV--KGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRV 194
Query: 78 SYVWNQE 84
V+N +
Sbjct: 195 LRVYNTQ 201
>UNIPROTKB|Q5R1S9 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031497 "chromatin assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 HOGENOM:HOG000183312 KO:K10751
EMBL:AB195693 EMBL:AJ719705 IPI:IPI00585257 RefSeq:NP_001008677.2
UniGene:Gga.8862 ProteinModelPortal:Q5R1S9 IntAct:Q5R1S9
STRING:Q5R1S9 GeneID:418514 KEGG:gga:418514 CTD:8208
InParanoid:Q5ZLM9 OrthoDB:EOG4G4GQD NextBio:20821686 PRINTS:PR00319
Uniprot:Q5R1S9
Length = 566
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 113 FAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
FAV S + +Y+ E ++ + H +++ ++W + FLA +STDG C F
Sbjct: 326 FAVASEDS---VLFYDTEQSFPFG-YVSNIHYHTLSDISWSSDGAFLAISSTDGYCS-FV 380
Query: 173 TFIK---GVDIKEKKE 185
TF K G+ +KEK +
Sbjct: 381 TFEKDELGIPLKEKPQ 396
Score = 79 (32.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
W+ D +A +N ++ ++ K +K+ +L +H V GI W I T+S DR
Sbjct: 137 WTSDGNYMASASVDNTAIMWDVV--KGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRV 194
Query: 78 SYVWNQE 84
V+N +
Sbjct: 195 LRVYNTQ 201
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 18 WSPDHAMVAF--CPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSH 74
W+P + + +N V +YK E LQ H +++S +DW+V + +VT S
Sbjct: 67 WNPHDSFAHYFAASSNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSV 126
Query: 75 DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
D Y+W+ + + PT+ + + A+ V+W+ K S V I + +++ +
Sbjct: 127 DTYIYIWDIKDTR-KPTVALSAVAGASQ-VKWNKKNANCLATSHDGDVRI-WDKRKPSTA 183
Query: 135 VSKLIRKRHDSSVTSVAWHPNNV-FLATTSTDGKCR 169
V L H S + + WHP++ LAT+S D +
Sbjct: 184 VEYLAA--HLSKIHGLDWHPDSEHILATSSQDNSVK 217
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 50/220 (22%), Positives = 88/220 (40%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
I C +++P +VA + ++ + + E+++ L+ H + + ++ +RI+T
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDI--QNGEEVYTLRGHSAEIISLSFNTSGDRIITG 237
Query: 73 SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN 132
S D VW+ + V L+ ++ W + GS KT + ++ N
Sbjct: 238 SFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC--SLILTGSMDKTCKL--WDATNG 293
Query: 133 WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIK-EKKEGTSSDT 191
V+ L HD + + +AT S DG R+FS + K E EG S
Sbjct: 294 KCVATLTG--HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKI 351
Query: 192 KFGEQILQLDLSFSWAFGVKW-SPSGNTLAYV-GHNSMIY 229
F Q L S W + +G L + GH I+
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 40/167 (23%), Positives = 69/167 (41%)
Query: 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRS 66
H +A + C WS D + V K + + ++Q H+ V + +S
Sbjct: 122 HDYA--VRCAEWSTDGRWLISGDGGGMV---KYFEPNLNNVKIVQAHEMEVRDVAFSPND 176
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
++ VT S D + VWN S L + V W P + A SG+K + +
Sbjct: 177 SKFVTASDDGSLKVWNFHMS--TEELKLTGHGWDVKTVDWHPSKGLLA--SGSKDNLVKF 232
Query: 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPN--NVFLATTSTDGKCRVF 171
++ ++ L H +++ ++ N + +LAT S D CRVF
Sbjct: 233 WDPRTGTCIATL--HGHKNTIMQASFQKNFGSNYLATVSRDSTCRVF 277
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 49/226 (21%), Positives = 97/226 (42%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
I+C +S D ++A + + ++ + +H + H +S + WS S+ +
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATN--YSLIHRYEGHSSGISDLAWSSDSHYTCSA 103
Query: 73 SHDRNSYVWNQEGSEWVPTLVILRLN-RAALCVQWSPKENKFAVGSGAKTVCICYYEQEN 131
S D +W+ L +LR + CV ++P N GS +T+ I +E +
Sbjct: 104 SDDCTLRIWDARSP--YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRI--WEVKT 159
Query: 132 NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIK---EKKEGTS 188
V ++I K H ++SV ++ + + + S DG C+++ +G +K + K
Sbjct: 160 GKCV-RMI-KAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK-EGTCLKTLIDDKSPAV 216
Query: 189 SDTKF---GEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFV 231
S KF G+ IL L + ++ Y GH + ++ +
Sbjct: 217 SFAKFSPNGKFILVATLDSTLKLS-NYATGKFLKVYTGHTNKVFCI 261
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 126 (49.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 18 WSPDHAMVAF--CPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSH 74
W+P + + +N V +YK E LQ H +++S +DW+V + +VT S
Sbjct: 67 WNPHDSFAHYFAASSNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSV 126
Query: 75 DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
D Y+W+ + + PT+ + + A+ V+W+ K + S V I + +++ +
Sbjct: 127 DTYIYIWDIKDTR-KPTVALSAVAGASQ-VKWNKKNANYLATSHDGDVRI-WDKRKPSTA 183
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFL-ATTSTDGKCR 169
V L H S + + WHP++ + AT+S D +
Sbjct: 184 VEYLAA--HLSKIHGLDWHPDSEHIFATSSQDNSVK 217
Score = 41 (19.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 354 FTTSGLDGKIVTWDLESQEDLLN 376
F TS D + WD LN
Sbjct: 207 FATSSQDNSVKFWDYRQPRKYLN 229
>RGD|1307634 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0031497 "chromatin
assembly" evidence=IEA;ISO] [GO:0033186 "CAF-1 complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:1307634 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:CH474083 EMBL:BC097460 IPI:IPI00370803
RefSeq:NP_001019912.1 UniGene:Rn.159953 STRING:Q4V8B4
Ensembl:ENSRNOT00000002299 GeneID:288242 KEGG:rno:288242
UCSC:RGD:1307634 InParanoid:Q4V8B4 NextBio:627840
Genevestigator:Q4V8B4 Uniprot:Q4V8B4
Length = 572
Score = 84 (34.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 143 HDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKG---VDIKEK 183
H +++ ++W + FLA +STDG C F TF KG V +KEK
Sbjct: 352 HYHTLSDISWSSDGAFLAVSSTDGYCS-FVTFEKGELGVPLKEK 394
Score = 80 (33.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77
W+ D M+A +N V I+ + K +K+ + +H V G+ W I T+S DR
Sbjct: 137 WATDGNMMASASVDNTVIIWDV--SKGQKISIFNEHKSYVQGVTWDPLGQYIATLSCDRV 194
Query: 78 SYVWNQE 84
V++ +
Sbjct: 195 LRVYSTQ 201
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 39/131 (29%), Positives = 54/131 (41%)
Query: 53 HDQIVSGIDWSVRSNRIVTVSHD---RNSYVWNQEGSEWVPTLVILRLNRAALCVQWS-P 108
H+ IV + RI T S D + + V N GS+ + TL R V W+ P
Sbjct: 10 HEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHR--GPVWEVAWAHP 67
Query: 109 KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV--FLATTSTDG 166
K I + E N W + H SSV S+AW P+++ LA S+DG
Sbjct: 68 KYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDG 127
Query: 167 KCRVFSTFIKG 177
VF+ G
Sbjct: 128 NISVFTARADG 138
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 117 (46.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 20 PDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSY 79
P+ ++A N+ + I + EK +L V + H I++ +D S I T S D +
Sbjct: 349 PEFNLLAMATNSPALRIVDI--EKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEAR 406
Query: 80 VW--NQEGSEWVPTLVILRLNRAALCVQWSPKEN--KFAVGSGAKTVCICYYEQEN--NW 133
+W N E ++ P A + S +N KF V +G+ + I ++ N N
Sbjct: 407 LWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLV-TGSTDLTIKKWKIPNTPNS 465
Query: 134 WV--SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFST 173
V S+ R+ HD + S+ PN+ + AT S D +V+ T
Sbjct: 466 IVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQT 507
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 354 FTTSGLDGKIVTWDLESQEDL 374
FTT+ DGK+ W ++E++
Sbjct: 620 FTTADADGKLSFWTDNTEEEV 640
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 117 (46.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 20 PDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSY 79
P+ ++A N+ + I + EK +L V + H I++ +D S I T S D +
Sbjct: 349 PEFNLLAMATNSPALRIVDI--EKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEAR 406
Query: 80 VW--NQEGSEWVPTLVILRLNRAALCVQWSPKEN--KFAVGSGAKTVCICYYEQEN--NW 133
+W N E ++ P A + S +N KF V +G+ + I ++ N N
Sbjct: 407 LWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLV-TGSTDLTIKKWKIPNTPNS 465
Query: 134 WV--SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFST 173
V S+ R+ HD + S+ PN+ + AT S D +V+ T
Sbjct: 466 IVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQT 507
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 354 FTTSGLDGKIVTWDLESQEDL 374
FTT+ DGK+ W ++E++
Sbjct: 620 FTTADADGKLSFWTDNTEEEV 640
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 118 (46.6 bits), Expect = 0.00069, P = 0.00069
Identities = 59/232 (25%), Positives = 96/232 (41%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
+T W+ + ++A + + I+ L E + L KH + + W+ + + ++T
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTL---NGELISTLSKHKGPIFSLKWNKKGDYLLTG 383
Query: 73 SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQEN 131
S DR + VW+ + EW + L V W + N FA S + +C +
Sbjct: 384 SVDRTAVVWDVKAEEWKQQFEFH--SGPTLDVDW--RNNVSFATSSTDSMIYLCKIGETR 439
Query: 132 NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF----STFIKGVDIKEK-KEG 186
+K H V V W P LA+ S D +++ STF+ D++E KE
Sbjct: 440 P---AKTFTG-HQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVH--DLREHTKEI 493
Query: 187 TS---SDTKFGEQI--LQLDL-SFSWAFGVK-WSPS-GNTL-AYVGHNSMIY 229
+ S T G QL L S S+ VK W G L ++ GH +Y
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVY 545
>FB|FBgn0260049 [details] [associations]
symbol:flr "flare" species:7227 "Drosophila melanogaster"
[GO:0030042 "actin filament depolymerization" evidence=ISS;IMP]
[GO:0003779 "actin binding" evidence=ISS] [GO:0008154 "actin
polymerization or depolymerization" evidence=ISS] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0035317 "imaginal
disc-derived wing hair organization" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0003779
GO:GO:0006911 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 GO:GO:0030042
GO:GO:0045214 GeneTree:ENSGT00390000009416 GO:GO:0001736
GO:GO:0035317 GO:GO:0030834 CTD:797829 OMA:INGIAAW EMBL:AY061340
RefSeq:NP_648642.1 RefSeq:NP_729891.1 UniGene:Dm.1492
ProteinModelPortal:Q9VU68 SMR:Q9VU68 DIP:DIP-18795N IntAct:Q9VU68
MINT:MINT-318098 STRING:Q9VU68 PaxDb:Q9VU68 PRIDE:Q9VU68
EnsemblMetazoa:FBtr0075845 GeneID:39505 KEGG:dme:Dmel_CG10724
UCSC:CG10724-RA FlyBase:FBgn0260049 OrthoDB:EOG4HQC0B
PhylomeDB:Q9VU68 GenomeRNAi:39505 NextBio:813989 Bgee:Q9VU68
GermOnline:CG10724 Uniprot:Q9VU68
Length = 608
Score = 114 (45.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS-VRSNRIVTVSHD 75
+WSPD+ + E + + E + + + ++ D+ R RIVT S D
Sbjct: 115 SWSPDNQRIVAVGEGRERFGHVFMSETGTSVGEISGQSKSINSADFRPARPFRIVTGSED 174
Query: 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135
V+ EG + + +R V++SP + KF +G + Y+ ++ V
Sbjct: 175 NTIAVF--EGPPFKFKMTKQDHSRFVQAVRYSP-DGKFFASAGFDGK-VFLYDGTSSELV 230
Query: 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKF-- 193
+ H V ++AW P++ L T S D CR+++ + + + E GT+ D +
Sbjct: 231 GEFGSPAHKGGVYALAWKPDSTQLLTCSGDKTCRLWTVESREL-VSEFVMGTTVDDQQVS 289
Query: 194 ----GEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228
G+ ++ + LS + PS GHN I
Sbjct: 290 CLWQGDNLITVSLSGVITYLNVADPSKPLRVVKGHNKPI 328
Score = 47 (21.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 210 VKWSPSGNTLAYVGHNSMIYFVDDVGPSP--LAQNVAFRDLPLRDVLFVSEKMVIGVGFD 267
V WSP+ +A ++ I P+ + +N A + ++++ VI G D
Sbjct: 539 VAWSPNSLLVASGSLDTTIIIWSVANPAKHTIIKN-AHPQSQITRLVWLDNNTVISTGQD 597
Query: 268 CNPMVF 273
CN V+
Sbjct: 598 CNTKVW 603
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 49/188 (26%), Positives = 80/188 (42%)
Query: 50 LQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK 109
L H +S + WS S+R+V+ S D+ VW+ + + TL + C ++P
Sbjct: 77 LYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK--GHSDFVFCCDFNPP 134
Query: 110 ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCR 169
N GS ++V I +E + + L H +++V ++ N + + S DG CR
Sbjct: 135 SNLIVSGSFDESVKI--WEVKTGKCLKTL--SAHSDPISAVNFNCNGSLIVSGSYDGLCR 190
Query: 170 VFSTFIKGVDIKE-KKEGTS--SDTKF---GEQILQLDLSFSWAFGVKWSPS-GNTL-AY 221
++ G ++ EG S KF G+ IL L + W S G L Y
Sbjct: 191 IWDA-ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKL---WDYSRGRCLKTY 246
Query: 222 VGHNSMIY 229
GH + Y
Sbjct: 247 TGHKNEKY 254
>RGD|1310589 [details] [associations]
symbol:Bop1 "block of proliferation 1" species:10116 "Rattus
norvegicus" [GO:0000448 "cleavage in ITS2 between 5.8S rRNA and
LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA;ISO] [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO;ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=ISO] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA;ISO] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR012953 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08145
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM01035
RGD:1310589 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
GO:GO:0051726 GO:GO:0043021 KO:K14824 GO:GO:0070545 GO:GO:0000463
CTD:23246 GeneTree:ENSGT00390000018422 HOGENOM:HOG000029368
OMA:PPPEYLF OrthoDB:EOG44XJGB GO:GO:0000448 EMBL:BC092594
IPI:IPI00366430 RefSeq:NP_001019421.1 UniGene:Rn.101388
ProteinModelPortal:Q562C2 STRING:Q562C2 PhosphoSite:Q562C2
PRIDE:Q562C2 Ensembl:ENSRNOT00000025134 GeneID:300050
KEGG:rno:300050 UCSC:RGD:1310589 InParanoid:Q562C2 NextBio:646211
ArrayExpress:Q562C2 Genevestigator:Q562C2 Uniprot:Q562C2
Length = 731
Score = 118 (46.6 bits), Expect = 0.00087, P = 0.00087
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRS 66
H QC+ H P +VA + + IY L++++ K L + + VS +
Sbjct: 564 HGQVQCVAFHPTRP-FLLVA---SQRSIRIYHLLRQELTKK--LMPNCKWVSSMAVHPAG 617
Query: 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126
+ I+ S+D + VW P V+ +A V + P+ FA GS +V +C+
Sbjct: 618 DNIICGSYD-SKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCH 676
Query: 127 ---YEQ--ENNWWVSKLIRKRH----DSSVTSVAWHPNNVFLATTSTDGKCRVFS 172
Y +N V + K H D V VA+HP ++ ++ DG R+FS
Sbjct: 677 GMVYNDLLQNPLLVPVKVLKGHSLTRDLGVLDVAFHPTQPWVFSSGADGTIRLFS 731
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 42/171 (24%), Positives = 74/171 (43%)
Query: 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72
+ C +W P +++ +N + I+ + + + L H VS ++W+ N IV+
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDA--KSSQNITTLHGHKSTVSKVEWNQNGNWIVSA 311
Query: 73 SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN 132
S D+ V++ + + T AL + P V SG K I Y+ N
Sbjct: 312 SSDQLLKVFDIRTMKEMQTFKGHGKEVTALALH--PYHEDLFV-SGDKDGKILYWIVGNP 368
Query: 133 WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEK 183
++ I HD+ V S++WHP LA+ S D + +S +K+K
Sbjct: 369 EPQAE-IHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSRNRPADTMKDK 418
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 120 (47.3 bits), Expect = 0.0010, P = 0.0010
Identities = 46/233 (19%), Positives = 100/233 (42%)
Query: 16 HA-WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH 74
HA +S D +A C + + ++K E E+L + HD + +S + T S
Sbjct: 619 HACFSRDRQRIASCGADKTLQVFKA--ESGERLLEISAHDDEILCCTFSADDKYVATCSA 676
Query: 75 DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134
D+ +WN + + V C Q++ + ++ + + + I ++ ++ +
Sbjct: 677 DKKVKIWNSRTGKCL--YVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYC 734
Query: 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTF----IKGVDIKEKKEGTSSD 190
+ + H ++V+ + PN+ ++A+ STDG ++++ ++ ++IK+
Sbjct: 735 RNTMFG--HVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQ 792
Query: 191 TKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243
E +++ WS S +T+ V N ++ F DV S L V
Sbjct: 793 QDDVEVLVKC---------CSWSRSSDTILVVAKNKLLLF--DVTTSNLLTQV 834
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 379 379 0.00089 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 123
No. of states in DFA: 628 (67 KB)
Total size of DFA: 300 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.31u 0.60s 29.91t Elapsed: 00:00:02
Total cpu time: 29.33u 0.60s 29.93t Elapsed: 00:00:02
Start: Fri May 10 05:20:41 2013 End: Fri May 10 05:20:43 2013
WARNINGS ISSUED: 1