Query 016982
Match_columns 379
No_of_seqs 610 out of 1830
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 07:00:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016982.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016982hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 2.7E-50 9.1E-55 340.8 41.0 288 6-369 28-320 (321)
2 1vyh_C Platelet-activating fac 100.0 8.6E-51 2.9E-55 355.7 38.5 288 4-369 102-410 (410)
3 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.6E-50 2.6E-54 341.9 43.1 313 5-377 10-342 (345)
4 3dwl_C Actin-related protein 2 100.0 5.8E-52 2E-56 360.1 28.7 360 1-368 1-377 (377)
5 1k8k_C P40, ARP2/3 complex 41 100.0 4.1E-49 1.4E-53 341.5 42.5 366 6-379 4-371 (372)
6 3frx_A Guanine nucleotide-bind 100.0 7.5E-49 2.6E-53 332.0 40.9 298 4-371 11-318 (319)
7 1got_B GT-beta; complex (GTP-b 100.0 1E-48 3.4E-53 334.4 40.5 286 5-367 50-340 (340)
8 2xzm_R RACK1; ribosome, transl 100.0 7E-48 2.4E-52 329.7 42.3 305 4-372 15-342 (343)
9 2hes_X YDR267CP; beta-propelle 100.0 1.5E-47 5E-52 325.7 40.5 301 5-370 9-328 (330)
10 2pbi_B Guanine nucleotide-bind 100.0 2.2E-47 7.6E-52 327.5 40.1 288 4-367 58-354 (354)
11 2ynn_A Coatomer subunit beta'; 100.0 4.4E-47 1.5E-51 319.1 41.0 291 4-370 7-302 (304)
12 3iz6_a 40S ribosomal protein R 100.0 3.4E-48 1.2E-52 336.1 31.3 299 5-373 61-378 (380)
13 4gqb_B Methylosome protein 50; 100.0 1.8E-47 6.2E-52 325.7 33.3 291 6-372 26-333 (344)
14 4aow_A Guanine nucleotide-bind 100.0 4.8E-46 1.7E-50 318.2 40.4 302 5-373 33-340 (340)
15 1erj_A Transcriptional repress 100.0 4.7E-46 1.6E-50 324.1 40.3 289 7-370 61-389 (393)
16 4g56_B MGC81050 protein; prote 100.0 1.5E-47 5E-52 328.9 30.1 290 6-371 38-344 (357)
17 1nr0_A Actin interacting prote 100.0 4.6E-46 1.6E-50 342.0 39.1 315 5-372 142-569 (611)
18 4ery_A WD repeat-containing pr 100.0 4.3E-45 1.5E-49 308.6 40.3 288 4-369 17-311 (312)
19 1nr0_A Actin interacting prote 100.0 2.4E-45 8.2E-50 337.3 36.7 329 7-376 15-361 (611)
20 3zwl_B Eukaryotic translation 100.0 1E-43 3.5E-48 307.1 42.5 311 3-376 25-352 (369)
21 2ymu_A WD-40 repeat protein; u 100.0 2.6E-44 8.9E-49 329.3 39.4 279 5-367 298-577 (577)
22 3dm0_A Maltose-binding peripla 100.0 1.7E-44 5.8E-49 336.9 38.1 311 5-370 377-693 (694)
23 2ynn_A Coatomer subunit beta'; 100.0 1.7E-43 5.7E-48 297.3 35.3 258 45-377 4-266 (304)
24 2pm7_B Protein transport prote 100.0 1.8E-43 6E-48 296.2 35.1 267 4-286 3-294 (297)
25 2ymu_A WD-40 repeat protein; u 100.0 4.2E-43 1.4E-47 321.3 40.3 287 5-376 257-544 (577)
26 4e54_B DNA damage-binding prot 100.0 1.4E-44 4.8E-49 319.2 29.3 298 6-374 115-434 (435)
27 3bg1_A Protein SEC13 homolog; 100.0 5.2E-44 1.8E-48 302.0 30.3 269 5-289 8-305 (316)
28 3ei3_B DNA damage-binding prot 100.0 3.7E-43 1.3E-47 305.3 36.1 294 5-370 68-382 (383)
29 1gxr_A ESG1, transducin-like e 100.0 1.4E-42 4.8E-47 296.3 38.8 286 5-368 46-335 (337)
30 3ow8_A WD repeat-containing pr 100.0 4.5E-43 1.5E-47 296.5 34.9 244 5-275 75-319 (321)
31 4gqb_B Methylosome protein 50; 100.0 2.8E-42 9.7E-47 293.7 35.0 246 7-278 79-332 (344)
32 1vyh_C Platelet-activating fac 100.0 1.2E-42 4.1E-47 304.1 33.6 244 5-275 145-409 (410)
33 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-41 5.4E-46 286.8 39.3 289 4-377 12-303 (313)
34 1sq9_A Antiviral protein SKI8; 100.0 8.4E-43 2.9E-47 304.6 31.9 318 5-372 11-397 (397)
35 3i2n_A WD repeat-containing pr 100.0 4.2E-42 1.5E-46 295.7 33.9 310 6-373 14-356 (357)
36 2j04_B YDR362CP, TAU91; beta p 100.0 7.4E-43 2.5E-47 311.6 29.1 336 6-370 129-517 (524)
37 2pm9_A Protein WEB1, protein t 100.0 6.3E-43 2.2E-47 307.3 25.9 298 7-374 9-341 (416)
38 3k26_A Polycomb protein EED; W 100.0 4.1E-42 1.4E-46 296.8 30.1 309 7-370 15-366 (366)
39 1r5m_A SIR4-interacting protei 100.0 2E-41 6.8E-46 298.4 33.6 289 6-372 41-363 (425)
40 4aez_A CDC20, WD repeat-contai 100.0 1.4E-40 4.6E-45 290.8 37.7 284 13-376 96-386 (401)
41 2pm9_A Protein WEB1, protein t 100.0 1.8E-42 6E-47 304.4 25.8 325 6-371 63-415 (416)
42 4h5i_A Guanine nucleotide-exch 100.0 4.2E-42 1.4E-46 295.7 27.2 294 1-370 1-343 (365)
43 1gxr_A ESG1, transducin-like e 100.0 8.8E-41 3E-45 285.2 35.2 292 7-375 6-301 (337)
44 1r5m_A SIR4-interacting protei 100.0 3.5E-41 1.2E-45 296.8 33.3 300 9-369 107-424 (425)
45 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.8E-40 9.4E-45 282.7 37.8 268 7-279 58-337 (345)
46 1got_B GT-beta; complex (GTP-b 100.0 2.8E-40 9.5E-45 282.2 37.4 260 45-376 46-307 (340)
47 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-40 5.4E-45 329.4 41.1 357 5-375 610-1039(1249)
48 3vl1_A 26S proteasome regulato 100.0 4.2E-42 1.4E-46 302.4 26.3 283 11-371 57-366 (420)
49 3gre_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 297.8 30.8 324 7-367 60-437 (437)
50 4ery_A WD repeat-containing pr 100.0 4.5E-40 1.5E-44 277.8 35.0 260 44-377 13-275 (312)
51 4gga_A P55CDC, cell division c 100.0 2.1E-39 7.1E-44 284.9 39.8 285 13-373 108-398 (420)
52 3vl1_A 26S proteasome regulato 100.0 8.6E-40 2.9E-44 287.7 36.1 295 11-370 98-419 (420)
53 3v7d_B Cell division control p 100.0 2E-39 6.9E-44 289.0 38.9 289 5-376 116-427 (464)
54 3jrp_A Fusion protein of prote 100.0 1.5E-39 5.2E-44 282.0 36.7 270 4-289 5-299 (379)
55 3f3f_A Nucleoporin SEH1; struc 100.0 6.7E-40 2.3E-44 280.9 33.2 306 4-376 5-343 (351)
56 3dw8_B Serine/threonine-protei 100.0 1.8E-39 6.3E-44 287.9 36.9 319 8-368 26-444 (447)
57 2pm7_B Protein transport prote 100.0 2.1E-39 7.3E-44 271.4 34.4 258 48-370 3-285 (297)
58 3mkq_A Coatomer beta'-subunit; 100.0 3.5E-39 1.2E-43 306.9 39.7 292 4-371 7-303 (814)
59 4a11_B DNA excision repair pro 100.0 4.1E-39 1.4E-43 282.1 37.0 311 5-376 38-371 (408)
60 2pbi_B Guanine nucleotide-bind 100.0 3.5E-39 1.2E-43 276.6 35.3 261 45-376 55-321 (354)
61 4g56_B MGC81050 protein; prote 100.0 2.6E-40 8.9E-45 283.8 28.2 248 6-279 90-345 (357)
62 2hes_X YDR267CP; beta-propelle 100.0 1.9E-39 6.5E-44 275.7 33.3 255 9-276 57-327 (330)
63 3frx_A Guanine nucleotide-bind 100.0 6.7E-39 2.3E-43 271.1 35.6 243 5-277 60-317 (319)
64 1erj_A Transcriptional repress 100.0 1E-38 3.5E-43 277.9 36.4 251 11-276 124-388 (393)
65 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-38 3.8E-43 281.7 37.0 287 8-374 131-418 (435)
66 4ggc_A P55CDC, cell division c 100.0 6.6E-38 2.3E-42 265.2 40.0 283 13-371 28-316 (318)
67 3iz6_a 40S ribosomal protein R 100.0 5.3E-40 1.8E-44 284.7 26.5 277 33-376 47-335 (380)
68 2xzm_R RACK1; ribosome, transl 100.0 1E-38 3.6E-43 272.8 32.9 246 5-276 71-339 (343)
69 1yfq_A Cell cycle arrest prote 100.0 1.8E-38 6.2E-43 271.5 33.3 279 7-367 8-321 (342)
70 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-39 5.2E-44 309.2 28.9 311 6-376 147-670 (902)
71 2oaj_A Protein SNI1; WD40 repe 100.0 2.9E-38 9.9E-43 300.4 36.8 244 5-275 12-310 (902)
72 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.2E-37 1.1E-41 273.3 39.3 284 5-377 113-398 (445)
73 3bg1_A Protein SEC13 homolog; 100.0 3.4E-39 1.1E-43 272.5 24.9 257 48-370 7-293 (316)
74 3sfz_A APAF-1, apoptotic pepti 100.0 4.3E-38 1.5E-42 312.0 36.8 335 5-376 652-1080(1249)
75 1pgu_A Actin interacting prote 100.0 8.6E-38 2.9E-42 288.2 36.1 296 7-377 15-335 (615)
76 3mkq_A Coatomer beta'-subunit; 100.0 2.1E-37 7.2E-42 294.7 39.1 248 5-278 50-303 (814)
77 1pgu_A Actin interacting prote 100.0 1.8E-37 6E-42 286.1 37.3 242 4-274 57-325 (615)
78 3v7d_B Cell division control p 100.0 6.9E-37 2.4E-41 272.7 38.0 281 5-367 157-460 (464)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 9.4E-38 3.2E-42 273.0 30.8 290 12-373 36-345 (402)
80 3jrp_A Fusion protein of prote 100.0 4.8E-37 1.6E-41 266.3 33.5 263 45-371 2-288 (379)
81 3mmy_A MRNA export factor; mRN 100.0 2.9E-37 1E-41 266.5 31.5 288 5-370 34-346 (368)
82 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-36 7.5E-41 268.1 37.2 253 10-284 4-348 (450)
83 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8E-36 2.7E-40 264.3 40.5 282 5-371 154-443 (445)
84 3gre_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 279.2 24.0 304 17-377 34-366 (437)
85 3jro_A Fusion protein of prote 100.0 1.7E-37 5.7E-42 291.3 30.3 265 4-284 3-292 (753)
86 2j04_A TAU60, YPL007P, hypothe 100.0 4.3E-38 1.5E-42 274.4 23.3 264 7-369 12-296 (588)
87 4aow_A Guanine nucleotide-bind 100.0 5.9E-36 2E-40 255.7 35.4 268 34-376 18-292 (340)
88 2xyi_A Probable histone-bindin 100.0 4.7E-36 1.6E-40 264.2 33.8 308 10-371 45-411 (430)
89 1sq9_A Antiviral protein SKI8; 100.0 1.2E-36 4E-41 265.7 29.6 250 4-277 56-395 (397)
90 1k8k_C P40, ARP2/3 complex 41 100.0 5.5E-36 1.9E-40 259.1 32.3 250 5-277 47-361 (372)
91 3dm0_A Maltose-binding peripla 100.0 4.5E-36 1.6E-40 280.0 33.5 245 5-276 425-692 (694)
92 3ei3_B DNA damage-binding prot 100.0 5.3E-36 1.8E-40 260.3 30.6 245 7-277 115-382 (383)
93 3k26_A Polycomb protein EED; W 100.0 7.8E-37 2.7E-41 263.7 24.3 259 9-276 68-365 (366)
94 2xyi_A Probable histone-bindin 100.0 4.6E-36 1.6E-40 264.3 28.9 255 5-277 123-410 (430)
95 4e54_B DNA damage-binding prot 100.0 7.4E-37 2.5E-41 269.8 23.0 253 5-279 159-432 (435)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 9.6E-36 3.3E-40 260.2 29.7 253 5-279 76-344 (402)
97 4aez_A CDC20, WD repeat-contai 100.0 3.8E-35 1.3E-39 256.3 33.3 242 9-279 133-382 (401)
98 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-36 5.6E-41 270.7 24.6 249 6-278 203-518 (524)
99 3i2n_A WD repeat-containing pr 100.0 3.9E-36 1.3E-40 258.5 26.2 245 7-277 62-353 (357)
100 3zwl_B Eukaryotic translation 100.0 1.9E-34 6.6E-39 249.0 36.9 267 44-376 22-310 (369)
101 3odt_A Protein DOA1; ubiquitin 100.0 7E-35 2.4E-39 246.0 33.0 253 44-377 8-262 (313)
102 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-35 4.3E-40 253.8 28.6 236 17-283 43-299 (343)
103 3dwl_C Actin-related protein 2 100.0 8.8E-37 3E-41 264.6 21.1 251 51-369 8-280 (377)
104 3dw8_B Serine/threonine-protei 100.0 4.9E-35 1.7E-39 259.4 30.6 253 53-374 27-377 (447)
105 4gga_A P55CDC, cell division c 100.0 1.9E-34 6.6E-39 253.3 33.2 247 5-277 142-395 (420)
106 3jro_A Fusion protein of prote 100.0 3.3E-35 1.1E-39 275.7 30.0 261 48-372 3-287 (753)
107 1yfq_A Cell cycle arrest prote 100.0 7.4E-35 2.5E-39 249.1 29.7 271 47-377 4-289 (342)
108 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-34 5.1E-39 248.0 31.5 317 6-374 15-340 (355)
109 4h5i_A Guanine nucleotide-exch 100.0 8.5E-35 2.9E-39 250.2 29.8 206 9-237 132-345 (365)
110 4gq1_A NUP37; propeller, trans 100.0 1.7E-34 5.8E-39 251.1 24.9 261 13-277 92-389 (393)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.9E-33 2.7E-37 245.2 33.6 250 8-282 100-397 (450)
112 2j04_A TAU60, YPL007P, hypothe 100.0 5.6E-35 1.9E-39 254.9 18.8 221 8-275 83-319 (588)
113 4ggc_A P55CDC, cell division c 100.0 1.7E-32 5.8E-37 232.0 32.3 248 5-277 62-315 (318)
114 3bws_A Protein LP49; two-domai 100.0 1.9E-32 6.5E-37 241.8 33.8 279 10-370 122-432 (433)
115 1l0q_A Surface layer protein; 100.0 1.1E-31 3.6E-36 233.9 37.8 271 23-377 3-282 (391)
116 4a11_B DNA excision repair pro 100.0 1.8E-33 6.1E-38 246.3 25.4 224 31-279 22-278 (408)
117 1p22_A F-BOX/WD-repeat protein 100.0 2.8E-32 9.5E-37 240.7 29.1 238 5-278 168-415 (435)
118 4gq1_A NUP37; propeller, trans 100.0 8.3E-32 2.8E-36 234.1 29.8 302 10-369 15-388 (393)
119 3mmy_A MRNA export factor; mRN 100.0 7.2E-32 2.5E-36 232.7 29.1 271 45-377 30-311 (368)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-32 5E-37 234.8 22.6 238 61-371 43-293 (343)
121 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-30 4.2E-35 223.2 30.4 232 5-238 52-340 (351)
122 1l0q_A Surface layer protein; 100.0 3E-29 1E-33 218.4 39.2 239 9-279 30-277 (391)
123 3vu4_A KMHSV2; beta-propeller 100.0 2E-30 7E-35 222.2 28.1 248 36-371 3-272 (355)
124 2w18_A PALB2, fancn, partner a 100.0 1.1E-29 3.7E-34 208.5 29.2 277 13-368 42-355 (356)
125 3bws_A Protein LP49; two-domai 100.0 4.3E-29 1.5E-33 220.4 33.6 290 10-377 60-397 (433)
126 2w18_A PALB2, fancn, partner a 100.0 4.7E-30 1.6E-34 210.6 23.1 200 10-233 111-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.2E-29 7.5E-34 220.1 28.8 280 10-371 62-388 (415)
128 1nir_A Nitrite reductase; hemo 100.0 7.2E-28 2.5E-32 216.7 35.5 299 12-378 180-522 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.6E-28 9E-33 213.3 27.5 238 6-276 113-386 (415)
130 2ecf_A Dipeptidyl peptidase IV 100.0 5.4E-28 1.9E-32 227.6 30.6 282 10-370 36-413 (741)
131 1nir_A Nitrite reductase; hemo 100.0 6.4E-27 2.2E-31 210.5 32.4 280 17-374 144-462 (543)
132 1ri6_A Putative isomerase YBHE 100.0 3.1E-25 1.1E-29 189.3 37.0 276 24-369 7-307 (343)
133 1xfd_A DIP, dipeptidyl aminope 100.0 1.8E-27 6.1E-32 223.5 24.5 226 11-263 17-321 (723)
134 2ojh_A Uncharacterized protein 100.0 2.3E-26 7.9E-31 192.1 28.1 258 28-361 18-293 (297)
135 1ri6_A Putative isomerase YBHE 100.0 7.7E-25 2.6E-29 186.9 37.1 262 7-287 34-319 (343)
136 1pby_B Quinohemoprotein amine 100.0 4.3E-26 1.5E-30 194.2 28.7 274 23-377 2-317 (337)
137 2ojh_A Uncharacterized protein 100.0 2.5E-26 8.7E-31 191.8 26.3 234 5-265 36-289 (297)
138 3u4y_A Uncharacterized protein 100.0 2.2E-24 7.5E-29 183.2 37.8 234 16-278 3-253 (331)
139 2z3z_A Dipeptidyl aminopeptida 100.0 1E-25 3.5E-30 211.0 29.4 281 11-372 82-437 (706)
140 3hfq_A Uncharacterized protein 99.9 8.5E-24 2.9E-28 180.8 36.6 276 31-373 15-322 (347)
141 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-25 6.3E-30 210.4 26.9 240 11-277 109-413 (741)
142 3vgz_A Uncharacterized protein 99.9 3.9E-24 1.3E-28 183.4 32.1 242 9-278 39-304 (353)
143 3hfq_A Uncharacterized protein 99.9 5.4E-24 1.8E-28 182.1 32.9 254 7-277 36-317 (347)
144 1k32_A Tricorn protease; prote 99.9 6.9E-25 2.3E-29 213.3 29.8 278 9-372 294-639 (1045)
145 3o4h_A Acylamino-acid-releasin 99.9 1.1E-24 3.7E-29 199.4 28.5 231 10-275 21-274 (582)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 5.5E-24 1.9E-28 186.5 31.8 255 10-289 36-346 (434)
147 1jmx_B Amine dehydrogenase; ox 99.9 3.6E-24 1.2E-28 183.2 28.5 286 14-377 3-332 (349)
148 1xfd_A DIP, dipeptidyl aminope 99.9 2.4E-24 8.4E-29 202.2 27.4 241 12-277 62-393 (723)
149 1k32_A Tricorn protease; prote 99.9 2.2E-24 7.6E-29 209.7 26.6 279 6-370 199-502 (1045)
150 2z3z_A Dipeptidyl aminopeptida 99.9 8.3E-24 2.8E-28 198.0 28.3 231 12-276 27-341 (706)
151 3scy_A Hypothetical bacterial 99.9 6.5E-22 2.2E-26 170.1 36.0 289 17-374 8-343 (361)
152 3u4y_A Uncharacterized protein 99.9 1.6E-22 5.3E-27 171.8 31.0 243 10-277 40-304 (331)
153 1z68_A Fibroblast activation p 99.9 2.4E-24 8.2E-29 202.0 18.8 233 14-275 19-342 (719)
154 3pe7_A Oligogalacturonate lyas 99.9 8.5E-23 2.9E-27 177.4 26.9 245 6-278 26-330 (388)
155 3scy_A Hypothetical bacterial 99.9 2.2E-21 7.6E-26 166.8 35.3 248 9-277 48-337 (361)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 4.3E-23 1.5E-27 180.9 22.1 203 54-278 36-279 (434)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 9.5E-21 3.2E-25 162.9 36.0 280 24-371 4-342 (365)
158 3vgz_A Uncharacterized protein 99.9 1.7E-21 6E-26 166.8 30.2 226 10-264 88-330 (353)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 8E-21 2.7E-25 163.4 33.2 249 11-278 40-342 (365)
160 1z68_A Fibroblast activation p 99.9 1.6E-22 5.4E-27 189.7 20.9 237 12-277 61-391 (719)
161 1pby_B Quinohemoprotein amine 99.9 4.1E-21 1.4E-25 163.3 26.6 234 12-279 35-312 (337)
162 4a5s_A Dipeptidyl peptidase 4 99.9 3.5E-21 1.2E-25 180.8 24.8 243 10-263 16-334 (740)
163 3azo_A Aminopeptidase; POP fam 99.9 2.2E-20 7.4E-25 173.6 29.1 245 5-277 18-323 (662)
164 3o4h_A Acylamino-acid-releasin 99.9 5.5E-21 1.9E-25 174.8 23.0 236 54-374 21-278 (582)
165 1q7f_A NHL, brain tumor CG1071 99.9 8.1E-19 2.8E-23 145.7 31.2 240 8-277 27-280 (286)
166 3c5m_A Oligogalacturonate lyas 99.9 3.3E-20 1.1E-24 161.4 22.9 220 13-265 38-300 (396)
167 2gop_A Trilobed protease; beta 99.8 4.3E-18 1.5E-22 145.4 30.0 218 11-276 15-290 (347)
168 1jmx_B Amine dehydrogenase; ox 99.8 8.2E-19 2.8E-23 149.9 24.8 203 12-244 44-333 (349)
169 1q7f_A NHL, brain tumor CG1071 99.8 9.7E-18 3.3E-22 139.1 30.3 245 52-373 27-283 (286)
170 4a5s_A Dipeptidyl peptidase 4 99.8 3.4E-18 1.2E-22 160.5 29.8 237 14-277 65-398 (740)
171 3azo_A Aminopeptidase; POP fam 99.8 2.2E-18 7.7E-23 160.1 28.1 233 15-276 81-366 (662)
172 3fvz_A Peptidyl-glycine alpha- 99.8 6.8E-18 2.3E-22 142.9 28.4 242 10-277 23-322 (329)
173 3pe7_A Oligogalacturonate lyas 99.8 5.5E-19 1.9E-23 153.3 21.2 238 9-276 79-381 (388)
174 3e5z_A Putative gluconolactona 99.8 2.3E-17 7.8E-22 137.6 29.6 240 6-275 23-284 (296)
175 2oiz_A Aromatic amine dehydrog 99.8 1.7E-17 5.8E-22 142.0 28.2 276 20-377 13-343 (361)
176 2dg1_A DRP35, lactonase; beta 99.8 3.8E-17 1.3E-21 138.7 28.4 237 11-276 6-262 (333)
177 2dg1_A DRP35, lactonase; beta 99.8 1.6E-16 5.4E-21 134.8 31.6 238 6-268 40-301 (333)
178 2z2n_A Virginiamycin B lyase; 99.8 2.2E-15 7.7E-20 125.6 37.3 240 8-275 12-253 (299)
179 2xdw_A Prolyl endopeptidase; a 99.8 1.4E-16 4.7E-21 149.0 32.8 240 20-276 81-365 (710)
180 3fvz_A Peptidyl-glycine alpha- 99.8 9.7E-17 3.3E-21 135.8 27.9 245 54-370 23-322 (329)
181 2xdw_A Prolyl endopeptidase; a 99.8 8.5E-17 2.9E-21 150.4 29.2 243 10-278 124-415 (710)
182 2gop_A Trilobed protease; beta 99.8 1.7E-16 5.9E-21 135.4 27.8 223 11-276 59-330 (347)
183 2bkl_A Prolyl endopeptidase; m 99.8 6.7E-17 2.3E-21 150.7 26.9 233 19-276 76-348 (695)
184 1qks_A Cytochrome CD1 nitrite 99.8 1.2E-14 4.1E-19 130.6 39.5 302 10-378 196-546 (567)
185 3no2_A Uncharacterized protein 99.8 8E-16 2.7E-20 126.2 28.6 228 21-279 4-253 (276)
186 3e5z_A Putative gluconolactona 99.8 4.8E-16 1.6E-20 129.6 27.5 200 49-276 22-245 (296)
187 3c5m_A Oligogalacturonate lyas 99.8 1.5E-17 5.2E-22 144.6 18.8 229 15-276 85-381 (396)
188 2oiz_A Aromatic amine dehydrog 99.8 5.3E-16 1.8E-20 132.7 27.0 217 15-260 54-360 (361)
189 1rwi_B Serine/threonine-protei 99.8 5.5E-16 1.9E-20 127.3 24.7 238 12-277 25-264 (270)
190 2bkl_A Prolyl endopeptidase; m 99.8 2.8E-16 9.4E-21 146.5 24.2 242 9-279 119-399 (695)
191 2qc5_A Streptogramin B lactona 99.7 6.2E-14 2.1E-18 116.8 36.2 238 10-275 19-258 (300)
192 1yr2_A Prolyl oligopeptidase; 99.7 2.2E-15 7.4E-20 141.5 28.9 232 19-276 115-392 (741)
193 1rwi_B Serine/threonine-protei 99.7 7.7E-15 2.6E-19 120.5 26.6 243 56-375 25-269 (270)
194 3dsm_A Uncharacterized protein 99.7 3.2E-15 1.1E-19 126.3 24.6 268 30-377 15-308 (328)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.8E-14 9.5E-19 119.9 30.2 247 10-277 17-299 (314)
196 3dsm_A Uncharacterized protein 99.7 1.7E-14 5.8E-19 121.8 27.5 235 11-276 44-301 (328)
197 1qks_A Cytochrome CD1 nitrite 99.7 1.2E-13 4.1E-18 124.1 34.4 241 20-287 165-435 (567)
198 2z2n_A Virginiamycin B lyase; 99.7 1.9E-13 6.3E-18 113.9 33.5 236 10-276 56-294 (299)
199 3sjl_D Methylamine dehydrogena 99.7 7E-14 2.4E-18 118.1 29.4 285 15-378 37-371 (386)
200 1yr2_A Prolyl oligopeptidase; 99.7 1.8E-14 6.1E-19 135.3 25.4 240 11-277 163-441 (741)
201 2mad_H Methylamine dehydrogena 99.7 2.5E-12 8.7E-17 110.0 36.2 277 16-376 26-356 (373)
202 3no2_A Uncharacterized protein 99.7 1.1E-13 3.6E-18 113.5 26.4 190 65-284 4-203 (276)
203 3g4e_A Regucalcin; six bladed 99.7 8.5E-13 2.9E-17 109.8 31.7 232 10-263 12-257 (297)
204 2qc5_A Streptogramin B lactona 99.7 1.3E-12 4.4E-17 108.8 32.5 235 11-274 62-297 (300)
205 3hrp_A Uncharacterized protein 99.7 7E-13 2.4E-17 115.1 30.7 233 11-273 131-406 (409)
206 1xip_A Nucleoporin NUP159; bet 99.6 3E-14 1E-18 120.8 17.8 173 12-222 39-231 (388)
207 2ghs_A AGR_C_1268P; regucalcin 99.6 5.6E-12 1.9E-16 106.3 31.4 229 12-263 50-287 (326)
208 3dr2_A Exported gluconolactona 99.6 1.8E-12 6E-17 108.4 26.8 236 6-272 40-301 (305)
209 3c75_H MADH, methylamine dehyd 99.6 5.3E-12 1.8E-16 108.6 29.7 276 20-377 82-409 (426)
210 1xip_A Nucleoporin NUP159; bet 99.6 2E-12 6.8E-17 109.7 24.4 173 56-264 39-230 (388)
211 2mad_H Methylamine dehydrogena 99.6 2.3E-11 7.9E-16 104.0 31.4 236 15-279 70-352 (373)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.7E-12 9.3E-17 107.7 25.0 240 55-370 18-299 (314)
213 2qe8_A Uncharacterized protein 99.5 4.5E-12 1.5E-16 107.7 25.0 242 9-266 15-309 (343)
214 3hrp_A Uncharacterized protein 99.5 1.1E-10 3.7E-15 101.3 33.3 194 56-275 132-352 (409)
215 3g4e_A Regucalcin; six bladed 99.5 4E-11 1.4E-15 99.7 28.4 198 51-276 9-228 (297)
216 3iuj_A Prolyl endopeptidase; h 99.5 2E-12 6.7E-17 120.4 22.0 239 9-277 127-405 (693)
217 3dr2_A Exported gluconolactona 99.5 3.1E-11 1.1E-15 100.8 24.3 200 49-275 39-265 (305)
218 3sjl_D Methylamine dehydrogena 99.5 2.6E-11 9E-16 102.4 23.2 238 15-279 82-365 (386)
219 3iuj_A Prolyl endopeptidase; h 99.5 5.8E-11 2E-15 110.5 26.6 184 53-263 127-341 (693)
220 2ece_A 462AA long hypothetical 99.4 2.1E-10 7.1E-15 97.7 26.6 241 17-266 88-399 (462)
221 1mda_H Methylamine dehydrogena 99.4 4.8E-11 1.7E-15 101.0 22.2 262 33-378 47-354 (368)
222 3c75_H MADH, methylamine dehyd 99.4 4E-11 1.4E-15 103.2 20.6 248 15-279 122-404 (426)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 1.1E-09 3.8E-14 92.2 26.4 188 9-223 88-290 (326)
224 1yiq_A Quinohemoprotein alcoho 99.3 4.1E-10 1.4E-14 104.2 23.8 195 22-239 70-342 (689)
225 1kb0_A Quinohemoprotein alcoho 99.3 2.7E-09 9.2E-14 98.6 25.3 194 22-239 77-350 (677)
226 2ece_A 462AA long hypothetical 99.3 5.9E-09 2E-13 88.9 24.9 193 12-223 139-399 (462)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.2 6.5E-08 2.2E-12 83.2 31.5 221 21-278 52-297 (376)
228 3hxj_A Pyrrolo-quinoline quino 99.2 1.9E-10 6.7E-15 97.0 15.3 225 16-282 25-249 (330)
229 1mda_H Methylamine dehydrogena 99.2 5.6E-10 1.9E-14 94.5 17.8 215 15-257 69-366 (368)
230 2hz6_A Endoplasmic reticulum t 99.2 4.6E-12 1.6E-16 108.5 5.1 204 21-260 8-216 (369)
231 2qe8_A Uncharacterized protein 99.2 3E-09 1E-13 90.2 21.2 198 9-231 65-317 (343)
232 3hxj_A Pyrrolo-quinoline quino 99.2 1.6E-09 5.4E-14 91.4 18.6 222 12-275 61-282 (330)
233 1fwx_A Nitrous oxide reductase 99.2 3.2E-09 1.1E-13 93.7 20.8 250 20-285 99-438 (595)
234 1npe_A Nidogen, entactin; glyc 99.2 1.8E-07 6E-12 76.3 28.6 221 11-260 36-263 (267)
235 2iwa_A Glutamine cyclotransfer 99.1 7.4E-08 2.5E-12 77.2 24.5 192 45-266 10-224 (266)
236 2iwa_A Glutamine cyclotransfer 99.1 7.6E-08 2.6E-12 77.1 24.0 194 12-236 22-238 (266)
237 2fp8_A Strictosidine synthase; 99.1 2.1E-07 7.1E-12 78.1 26.9 240 11-276 19-312 (322)
238 2xbg_A YCF48-like protein; pho 99.1 1.3E-06 4.5E-11 73.3 31.1 243 10-283 35-284 (327)
239 1kb0_A Quinohemoprotein alcoho 99.1 5.3E-08 1.8E-12 90.0 24.2 219 23-263 175-535 (677)
240 1yiq_A Quinohemoprotein alcoho 99.1 1E-07 3.5E-12 88.3 25.1 185 59-263 239-533 (689)
241 1fwx_A Nitrous oxide reductase 99.0 7.1E-08 2.4E-12 85.3 22.6 211 11-237 134-433 (595)
242 3nol_A Glutamine cyclotransfer 99.0 2.5E-07 8.6E-12 73.2 23.4 198 45-274 32-251 (262)
243 2fp8_A Strictosidine synthase; 99.0 7.6E-07 2.6E-11 74.6 27.5 189 56-266 20-247 (322)
244 3q7m_A Lipoprotein YFGL, BAMB; 99.0 7.5E-07 2.6E-11 76.5 28.1 227 21-279 102-339 (376)
245 2hz6_A Endoplasmic reticulum t 99.0 1.3E-10 4.6E-15 99.4 4.3 185 65-283 8-199 (369)
246 3qqz_A Putative uncharacterize 99.0 2.1E-06 7.1E-11 68.4 27.9 207 48-273 20-249 (255)
247 3qqz_A Putative uncharacterize 99.0 3.1E-06 1.1E-10 67.4 27.7 203 6-232 22-250 (255)
248 2p4o_A Hypothetical protein; p 99.0 1.2E-06 4E-11 72.9 26.6 228 11-263 32-273 (306)
249 3nol_A Glutamine cyclotransfer 99.0 3.9E-07 1.3E-11 72.1 21.9 181 13-224 45-244 (262)
250 1npe_A Nidogen, entactin; glyc 99.0 2.2E-06 7.7E-11 69.6 27.4 226 22-276 1-237 (267)
251 1kv9_A Type II quinohemoprotei 98.9 5.4E-07 1.9E-11 83.2 25.5 194 22-239 66-337 (668)
252 4a2l_A BT_4663, two-component 98.9 1.6E-05 5.5E-10 75.3 34.7 236 11-278 263-527 (795)
253 4a2l_A BT_4663, two-component 98.9 1.3E-05 4.4E-10 76.0 33.5 234 11-277 310-571 (795)
254 1k3i_A Galactose oxidase precu 98.9 8.6E-08 3E-12 88.6 18.1 116 15-131 190-325 (656)
255 3nok_A Glutaminyl cyclase; bet 98.9 4.3E-07 1.5E-11 71.8 19.1 179 13-223 57-253 (268)
256 3nok_A Glutaminyl cyclase; bet 98.8 4.4E-06 1.5E-10 66.1 23.0 189 45-266 44-254 (268)
257 3mbr_X Glutamine cyclotransfer 98.8 8.9E-06 3.1E-10 63.8 24.6 190 45-266 10-223 (243)
258 2ad6_A Methanol dehydrogenase 98.8 3.7E-06 1.3E-10 76.0 25.6 106 22-132 62-188 (571)
259 3mbr_X Glutamine cyclotransfer 98.8 6.7E-06 2.3E-10 64.5 23.6 183 11-224 21-223 (243)
260 3tc9_A Hypothetical hydrolase; 98.8 1.3E-05 4.6E-10 69.8 28.0 154 12-173 138-299 (430)
261 1w6s_A Methanol dehydrogenase 98.8 8.4E-06 2.9E-10 73.8 26.7 195 22-239 62-346 (599)
262 3v9f_A Two-component system se 98.8 3.3E-05 1.1E-09 73.1 31.8 236 11-276 258-523 (781)
263 3v64_C Agrin; beta propeller, 98.7 7E-05 2.4E-09 63.3 30.3 233 10-274 33-272 (349)
264 2xe4_A Oligopeptidase B; hydro 98.7 2.9E-06 1E-10 79.6 22.8 157 12-173 175-352 (751)
265 2xe4_A Oligopeptidase B; hydro 98.7 6.2E-06 2.1E-10 77.4 24.5 197 56-276 175-397 (751)
266 4hw6_A Hypothetical protein, I 98.7 2.8E-05 9.6E-10 67.8 26.9 214 12-233 140-372 (433)
267 2p4o_A Hypothetical protein; p 98.7 9.3E-05 3.2E-09 61.4 32.2 212 45-275 23-240 (306)
268 3v9f_A Two-component system se 98.7 0.00021 7.1E-09 67.6 33.7 235 11-277 211-478 (781)
269 3v65_B Low-density lipoprotein 98.6 0.0001 3.5E-09 63.2 28.3 231 12-274 78-315 (386)
270 2xbg_A YCF48-like protein; pho 98.6 5E-05 1.7E-09 63.6 25.5 230 10-273 79-318 (327)
271 3a9g_A Putative uncharacterize 98.6 5.6E-05 1.9E-09 64.0 25.8 249 11-266 29-330 (354)
272 1k3i_A Galactose oxidase precu 98.6 3.1E-06 1.1E-10 78.2 19.2 230 15-266 247-529 (656)
273 2ism_A Putative oxidoreductase 98.6 0.00013 4.5E-09 61.7 27.2 247 11-266 31-333 (352)
274 1kv9_A Type II quinohemoprotei 98.6 1.4E-05 4.8E-10 73.9 22.1 184 59-263 234-517 (668)
275 1flg_A Protein (quinoprotein e 98.6 0.00031 1.1E-08 63.7 30.2 106 23-132 69-196 (582)
276 2ad6_A Methanol dehydrogenase 98.6 2.5E-05 8.6E-10 70.7 23.1 184 60-266 240-525 (571)
277 3v64_C Agrin; beta propeller, 98.6 0.00018 6.3E-09 60.7 27.1 200 11-238 73-278 (349)
278 3v65_B Low-density lipoprotein 98.6 0.00019 6.6E-09 61.5 27.3 201 11-238 116-321 (386)
279 3kya_A Putative phosphatase; s 98.5 0.0004 1.4E-08 60.8 29.0 159 12-173 140-339 (496)
280 2p9w_A MAL S 1 allergenic prot 98.5 0.00011 3.7E-09 60.3 22.4 163 54-236 12-216 (334)
281 1ijq_A LDL receptor, low-densi 98.5 0.00038 1.3E-08 57.9 29.3 205 11-238 30-241 (316)
282 1ijq_A LDL receptor, low-densi 98.4 0.00044 1.5E-08 57.5 31.0 222 24-275 3-236 (316)
283 3sov_A LRP-6, low-density lipo 98.4 0.00051 1.7E-08 57.1 27.1 225 24-275 6-236 (318)
284 1w6s_A Methanol dehydrogenase 98.4 8.1E-05 2.8E-09 67.5 22.3 72 60-132 246-345 (599)
285 1flg_A Protein (quinoprotein e 98.4 0.00017 5.9E-09 65.3 24.1 72 60-132 251-358 (582)
286 3p5b_L Low density lipoprotein 98.4 0.00084 2.9E-08 57.8 30.3 222 24-274 85-317 (400)
287 3tc9_A Hypothetical hydrolase; 98.4 0.00093 3.2E-08 58.2 28.9 153 57-235 139-301 (430)
288 3sov_A LRP-6, low-density lipo 98.4 0.00072 2.5E-08 56.2 25.5 200 12-238 36-241 (318)
289 3p5b_L Low density lipoprotein 98.4 0.00098 3.4E-08 57.4 30.2 206 10-238 111-323 (400)
290 2p9w_A MAL S 1 allergenic prot 98.4 0.00017 5.7E-09 59.2 20.6 163 7-173 9-213 (334)
291 4hw6_A Hypothetical protein, I 98.3 0.0002 6.9E-09 62.3 21.8 202 10-234 181-432 (433)
292 3amr_A 3-phytase; beta-propell 98.2 0.0015 5E-08 54.2 26.5 203 22-244 40-272 (355)
293 3m0c_C LDL receptor, low-densi 98.2 0.0039 1.3E-07 58.4 29.3 187 24-237 397-591 (791)
294 3das_A Putative oxidoreductase 98.2 0.0019 6.6E-08 53.9 29.3 252 10-266 31-326 (347)
295 2g8s_A Glucose/sorbosone dehyd 98.1 0.0035 1.2E-07 53.0 26.0 259 11-274 18-349 (353)
296 3m0c_C LDL receptor, low-densi 98.1 0.0075 2.6E-07 56.6 29.9 202 10-238 423-635 (791)
297 2vpj_A Kelch-like protein 12; 98.1 0.0017 5.7E-08 53.5 21.3 238 21-287 14-287 (301)
298 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0073 2.5E-07 55.2 30.6 222 23-274 7-234 (628)
299 1zgk_A Kelch-like ECH-associat 98.0 0.0023 7.9E-08 52.9 21.2 191 20-236 23-241 (308)
300 2xzh_A Clathrin heavy chain 1; 98.0 0.0042 1.4E-07 50.7 28.9 241 16-280 72-335 (365)
301 3ii7_A Kelch-like protein 7; p 98.0 0.0034 1.2E-07 51.8 22.0 144 22-173 12-176 (306)
302 2xn4_A Kelch-like protein 2; s 98.0 0.0022 7.5E-08 52.9 20.8 190 21-236 15-230 (302)
303 3kya_A Putative phosphatase; s 97.9 0.0098 3.3E-07 52.2 26.2 199 12-236 187-476 (496)
304 3ii7_A Kelch-like protein 7; p 97.9 0.0016 5.4E-08 53.8 18.4 190 21-236 55-273 (306)
305 2vpj_A Kelch-like protein 12; 97.9 0.002 7E-08 53.0 19.1 145 21-173 62-229 (301)
306 3ei3_A DNA damage-binding prot 97.9 0.024 8.2E-07 55.7 36.1 75 9-84 552-635 (1158)
307 1n7d_A LDL receptor, low-densi 97.9 0.00036 1.2E-08 64.8 15.2 178 75-276 385-570 (699)
308 3s94_A LRP-6, low-density lipo 97.9 0.011 3.7E-07 54.0 24.6 199 11-237 40-245 (619)
309 4asc_A Kelch repeat and BTB do 97.9 0.0061 2.1E-07 50.5 21.4 186 24-236 7-222 (315)
310 1n7d_A LDL receptor, low-densi 97.8 0.00022 7.6E-09 66.1 13.2 216 31-275 385-612 (699)
311 3sre_A PON1, serum paraoxonase 97.8 0.011 3.8E-07 49.5 25.0 188 56-266 51-285 (355)
312 2xn4_A Kelch-like protein 2; s 97.8 0.0017 6E-08 53.5 17.0 145 21-173 61-227 (302)
313 4a0p_A LRP6, LRP-6, low-densit 97.8 0.022 7.6E-07 52.1 28.5 198 11-237 37-239 (628)
314 3pbp_A Nucleoporin NUP82; beta 97.7 0.011 3.7E-07 50.2 20.5 158 64-231 30-208 (452)
315 1zgk_A Kelch-like ECH-associat 97.7 0.0022 7.4E-08 53.1 15.9 145 21-173 70-238 (308)
316 2ism_A Putative oxidoreductase 97.7 0.019 6.4E-07 48.4 26.7 105 56-163 32-153 (352)
317 3a9g_A Putative uncharacterize 97.6 0.021 7.1E-07 48.2 28.2 106 55-163 29-153 (354)
318 3pbp_A Nucleoporin NUP82; beta 97.6 0.016 5.4E-07 49.3 18.8 148 20-172 30-209 (452)
319 1cru_A Protein (soluble quinop 97.5 0.027 9.1E-07 49.3 21.0 109 56-164 28-163 (454)
320 3s25_A Hypothetical 7-bladed b 97.5 0.027 9.1E-07 46.2 20.3 197 16-263 58-277 (302)
321 3s25_A Hypothetical 7-bladed b 97.5 0.027 9.2E-07 46.2 21.7 198 19-265 22-240 (302)
322 1cru_A Protein (soluble quinop 97.5 0.02 6.8E-07 50.1 19.8 108 11-118 27-163 (454)
323 3amr_A 3-phytase; beta-propell 97.5 0.032 1.1E-06 46.3 23.0 192 66-276 40-262 (355)
324 2woz_A Kelch repeat and BTB do 97.5 0.036 1.2E-06 45.9 21.2 142 23-173 17-182 (318)
325 1bpo_A Protein (clathrin); cla 97.4 0.044 1.5E-06 46.7 31.2 243 16-281 71-335 (494)
326 2uvk_A YJHT; unknown function, 97.4 0.017 5.7E-07 48.8 18.0 103 21-127 65-224 (357)
327 4asc_A Kelch repeat and BTB do 97.4 0.011 3.9E-07 48.9 16.5 146 20-173 44-219 (315)
328 1tl2_A L10, protein (tachylect 97.4 0.0054 1.8E-07 47.0 12.8 184 66-268 4-201 (236)
329 2uvk_A YJHT; unknown function, 97.4 0.034 1.2E-06 46.9 19.6 96 21-119 19-128 (357)
330 2woz_A Kelch repeat and BTB do 97.2 0.019 6.4E-07 47.6 15.7 147 19-173 54-229 (318)
331 2zwa_A Leucine carboxyl methyl 97.2 0.03 1E-06 52.0 18.2 151 20-173 396-575 (695)
332 3s94_A LRP-6, low-density lipo 97.1 0.15 5.1E-06 46.6 28.9 188 24-237 319-512 (619)
333 1xi4_A Clathrin heavy chain; a 96.9 0.063 2.1E-06 52.9 17.5 244 18-283 73-337 (1630)
334 3das_A Putative oxidoreductase 96.8 0.19 6.4E-06 42.0 31.2 115 49-163 26-158 (347)
335 2zwa_A Leucine carboxyl methyl 96.7 0.071 2.4E-06 49.5 16.5 152 21-174 451-634 (695)
336 3sre_A PON1, serum paraoxonase 96.7 0.21 7.3E-06 41.8 31.6 198 12-233 51-296 (355)
337 1tl2_A L10, protein (tachylect 96.7 0.014 4.8E-07 44.7 9.4 109 145-270 41-156 (236)
338 2g8s_A Glucose/sorbosone dehyd 96.5 0.32 1.1E-05 40.9 23.4 108 56-164 19-149 (353)
339 3ei3_A DNA damage-binding prot 96.3 0.92 3.1E-05 44.8 33.5 222 12-263 515-752 (1158)
340 2wg3_C Hedgehog-interacting pr 95.4 1.3 4.4E-05 38.8 28.7 108 11-118 14-158 (463)
341 2be1_A Serine/threonine-protei 95.3 0.54 1.8E-05 39.1 13.4 108 23-132 11-133 (339)
342 2be1_A Serine/threonine-protei 95.3 0.19 6.6E-06 41.7 10.6 187 67-276 11-230 (339)
343 3ott_A Two-component system se 95.2 2.1 7E-05 40.3 32.1 224 11-272 63-302 (758)
344 1xi4_A Clathrin heavy chain; a 95.2 1.2 4E-05 44.5 17.0 143 76-250 48-201 (1630)
345 3b7f_A Glycosyl hydrolase, BNR 95.0 1.5 5.2E-05 37.3 26.0 155 10-166 54-254 (394)
346 3sbq_A Nitrous-oxide reductase 94.9 1.9 6.6E-05 38.3 26.3 245 25-277 73-408 (638)
347 3sbq_A Nitrous-oxide reductase 94.2 2.9 9.8E-05 37.2 21.4 203 21-235 141-408 (638)
348 3b7f_A Glycosyl hydrolase, BNR 91.9 5.2 0.00018 33.9 25.5 144 23-170 23-203 (394)
349 3qhy_B Beta-lactamase inhibito 90.1 6.4 0.00022 31.7 15.1 223 11-277 24-246 (282)
350 1bpo_A Protein (clathrin); cla 89.9 8.9 0.00031 33.1 30.9 216 31-279 47-291 (494)
351 2xzh_A Clathrin heavy chain 1; 89.3 8.2 0.00028 31.8 32.7 215 32-279 49-292 (365)
352 3q6k_A 43.2 kDa salivary prote 88.2 11 0.00037 31.8 20.4 215 10-235 25-306 (381)
353 3ott_A Two-component system se 88.0 18 0.0006 33.9 35.9 232 11-277 146-401 (758)
354 2wg3_C Hedgehog-interacting pr 87.2 14 0.00049 32.2 28.5 111 56-166 15-160 (463)
355 4gq2_M Nucleoporin NUP120; bet 85.9 26 0.0009 33.9 18.1 39 56-94 237-275 (950)
356 1sqj_A OXG-RCBH, oligoxylogluc 85.5 25 0.00085 33.2 24.2 155 10-165 14-190 (789)
357 3qhy_B Beta-lactamase inhibito 77.4 26 0.00089 28.1 18.2 185 56-279 25-209 (282)
358 4fhn_B Nucleoporin NUP120; pro 77.0 16 0.00055 36.2 10.6 39 56-94 239-277 (1139)
359 3zwu_A Alkaline phosphatase PH 75.9 15 0.00051 33.2 9.1 59 57-116 478-548 (592)
360 4fhn_B Nucleoporin NUP120; pro 73.7 7.4 0.00025 38.6 7.2 26 352-377 250-275 (1139)
361 3f7f_A Nucleoporin NUP120; nuc 73.6 8 0.00027 35.6 6.8 26 352-377 232-257 (729)
362 1wp5_A Topoisomerase IV; broke 72.0 40 0.0014 27.7 23.7 204 20-235 3-225 (323)
363 3no0_A DNA gyrase subunit A; D 71.0 38 0.0013 27.0 20.9 161 10-174 23-195 (276)
364 3zwu_A Alkaline phosphatase PH 70.0 19 0.00064 32.5 8.3 58 207-265 478-548 (592)
365 3f7f_A Nucleoporin NUP120; nuc 68.7 75 0.0026 29.5 14.8 84 7-94 158-259 (729)
366 4a9v_A PHOX; hydrolase, beta-p 67.1 45 0.0016 29.9 9.9 61 56-117 477-549 (592)
367 4a9v_A PHOX; hydrolase, beta-p 64.8 36 0.0012 30.5 8.8 59 206-265 477-548 (592)
368 1sqj_A OXG-RCBH, oligoxylogluc 64.6 96 0.0033 29.3 21.0 114 54-167 14-144 (789)
369 1suu_A DNA gyrase subunit A; t 63.8 59 0.002 26.5 24.5 204 20-235 6-231 (312)
370 3no0_A DNA gyrase subunit A; D 58.0 70 0.0024 25.5 23.4 165 56-234 25-195 (276)
371 3q6k_A 43.2 kDa salivary prote 57.8 85 0.0029 26.5 23.8 161 12-173 88-304 (381)
372 2cn3_A Xyloglucanase, beta-1,4 57.4 1.2E+02 0.0042 28.2 24.4 105 12-118 24-152 (737)
373 3uc1_A DNA gyrase subunit A; D 55.7 85 0.0029 25.8 22.1 162 11-174 42-227 (327)
374 4gq2_M Nucleoporin NUP120; bet 55.1 1.6E+02 0.0053 28.6 17.0 29 146-174 237-265 (950)
375 1zi0_A DNA gyrase subunit A; b 54.3 86 0.0029 25.4 25.2 201 20-233 1-224 (307)
376 3al9_A Plexin-A2; beta-propell 43.8 1.3E+02 0.0043 26.9 8.9 69 56-124 401-476 (539)
377 3l6v_A GYRA, DNA gyrase subuni 42.3 1.5E+02 0.0052 24.8 25.7 155 18-174 3-179 (370)
378 1s28_A ORF1; type III chaperon 41.1 41 0.0014 22.8 4.0 37 1-38 20-56 (132)
379 3al9_A Plexin-A2; beta-propell 40.8 1.1E+02 0.0037 27.3 8.1 70 11-80 400-476 (539)
380 3mez_B Mannose-specific lectin 40.0 80 0.0027 20.9 7.1 58 208-276 26-83 (113)
381 4hvt_A Ritya.17583.B, post-pro 34.7 2.8E+02 0.0097 25.7 19.3 34 57-90 131-170 (711)
382 1zi0_A DNA gyrase subunit A; b 33.5 1.9E+02 0.0065 23.4 22.5 151 21-173 52-224 (307)
383 1suu_A DNA gyrase subunit A; t 32.2 2E+02 0.0069 23.3 24.2 160 13-174 49-230 (312)
384 1q47_A Semaphorin 3A; beta pro 31.7 1.4E+02 0.0049 26.2 7.2 57 68-124 423-487 (495)
385 3mez_A Mannose-specific lectin 30.9 1.2E+02 0.0039 20.0 5.4 54 208-274 22-75 (111)
386 3mwp_A Nucleoprotein; structur 30.6 17 0.00058 30.7 1.2 21 355-375 161-181 (577)
387 3uc1_A DNA gyrase subunit A; D 30.3 2.3E+02 0.0077 23.2 22.9 204 22-234 3-227 (327)
388 4gz8_A Semaphorin-3A; multi-do 30.0 2.1E+02 0.0073 26.3 8.2 57 68-124 431-495 (667)
389 4hvt_A Ritya.17583.B, post-pro 29.7 3.5E+02 0.012 25.2 26.7 229 13-260 131-408 (711)
390 1olz_A Semaphorin 4D; developm 29.2 2.7E+02 0.0091 25.7 8.8 58 112-170 417-477 (663)
391 3nvq_A Semaphorin-7A; beta-pro 26.3 2.4E+02 0.0084 25.4 7.8 70 11-80 362-444 (590)
392 1olz_A Semaphorin 4D; developm 25.5 4E+02 0.014 24.5 11.7 69 11-80 397-477 (663)
393 1zvt_A Topoisomerase IV subuni 25.0 2.5E+02 0.0085 22.0 13.0 80 144-235 83-163 (256)
394 3a0f_A Xyloglucanase; beta-pro 23.5 4.6E+02 0.016 24.5 21.7 209 54-282 20-288 (763)
395 4gz8_A Semaphorin-3A; multi-do 23.5 3.8E+02 0.013 24.7 8.6 59 112-170 431-495 (667)
396 1zso_A Hypothetical protein; s 23.4 1.7E+02 0.0058 21.1 5.2 17 16-32 115-131 (164)
397 1b2p_A Protein (lectin); manno 23.3 1.7E+02 0.0059 19.5 5.9 22 252-274 64-85 (119)
398 1q47_A Semaphorin 3A; beta pro 22.4 2.5E+02 0.0086 24.7 7.1 69 12-80 405-487 (495)
399 3nvq_A Semaphorin-7A; beta-pro 21.7 3E+02 0.01 24.9 7.5 57 68-124 382-444 (590)
400 2cn3_A Xyloglucanase, beta-1,4 21.1 5E+02 0.017 24.1 19.5 109 56-164 24-152 (737)
401 3ol2_B Plexin-B1; beta-propell 21.0 2E+02 0.0068 25.6 6.2 61 111-171 401-462 (528)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=340.82 Aligned_cols=288 Identities=18% Similarity=0.211 Sum_probs=253.0
Q ss_pred eeccCcceeEEEeCCC----CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q 016982 6 VHQFAQCITCHAWSPD----HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVW 81 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~----~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 81 (379)
+.+|.+.|++++|+|+ +.+|++|+.|+.|++|++.+++......+.+|...|.+++|+|++.++++++.|++|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4689999999999985 578999999999999999887666677899999999999999999999999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
|+.+++....+ ..+...+.+++|+|++++|++++.|+.+++|+++.+. ....+ ..+...+.+++|+|++++|++
T Consensus 108 d~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~---~~~~~-~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 108 DLENGKQIKSI--DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK---KEYSL-DTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp ETTTTEEEEEE--ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS---EEEEE-ECSSSCEEEEEECTTSSEEEE
T ss_pred ECCCCCEEEEE--eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc---eeEEe-cCCCceEEEEEECCCCCEEEE
Confidence 99999866555 5677889999999999999999999999999998877 34445 678889999999999999999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQ 241 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~ 241 (379)
++.|+.|++||+ .+++.+..+.+|..+|.+++|+|++++|++++.|+.|++||+++.. ...
T Consensus 182 g~~dg~i~iwd~------------------~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~ 242 (321)
T 3ow8_A 182 GAIDGIINIFDI------------------ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAG 242 (321)
T ss_dssp EETTSCEEEEET------------------TTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEE
T ss_pred EcCCCeEEEEEC------------------CCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeE
Confidence 999999999997 6788889999999999999999999999999999999999998876 457
Q ss_pred eeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcc
Q 016982 242 NVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGN 320 (379)
Q Consensus 242 ~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
.+.+|...|.+++|+|++++|+ ++.|+.+++|+..... ...
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~---~~~----------------------------------- 284 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT---CVH----------------------------------- 284 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEE-----------------------------------
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE---EEE-----------------------------------
Confidence 8888999999999999999887 6788999999976542 111
Q ss_pred cccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCC
Q 016982 321 DAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
.+.+|...|++++ |++++ .+|+|++.||.|++||+.
T Consensus 285 --------~~~~h~~~v~~v~-~s~~g----~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 285 --------TFFDHQDQVWGVK-YNGNG----SKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp --------EECCCSSCEEEEE-ECTTS----SEEEEEETTCCEEEEECC
T ss_pred --------EEcCCCCcEEEEE-ECCCC----CEEEEEeCCCeEEEEeCC
Confidence 1247999999999 77665 899999999999999974
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-51 Score=355.70 Aligned_cols=288 Identities=17% Similarity=0.197 Sum_probs=255.7
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
..+.+|.++|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~--~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 356789999999999999999999999999999999987 567889999999999999999999999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.+++....+ .+|...|.+++|+|++++|++++.|+.|++||++++. ....+ .+|...|.++.|+|++++|++++
T Consensus 180 ~~~~~~~~~--~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~---~~~~~-~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 180 QGFECIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVKTF-TGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp TSSCEEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEE-ECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEE-eCCCccEEEEEECCCCCEEEEEc
Confidence 988865554 6799999999999999999999999999999999887 45666 78999999999999999999999
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCC--------------------CCEEEEEc
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS--------------------GNTLAYVG 223 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--------------------~~~l~~~~ 223 (379)
.|+.|++||+ .++++...+..|...|.+++|+|+ +.+|++++
T Consensus 254 ~D~~v~vwd~------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 254 NDQTVRVWVV------------------ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp TTSCEEEEET------------------TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred CCCeEEEEEC------------------CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 9999999997 667888889999999999999996 67899999
Q ss_pred CCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCC
Q 016982 224 HNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQ 302 (379)
Q Consensus 224 ~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
.|+.|++||++++. ++..+.+|...|.+++|+|+|++|+ ++.|+.+++|+........
T Consensus 316 ~D~~i~iwd~~~~~-~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~-------------------- 374 (410)
T 1vyh_C 316 RDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK-------------------- 374 (410)
T ss_dssp TTSEEEEEETTTTE-EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE--------------------
T ss_pred CCCeEEEEECCCCc-eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE--------------------
Confidence 99999999998876 4578888999999999999998777 6678899999876543222
Q ss_pred cccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCC
Q 016982 303 FSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
.+.+|...|++++ |++++ .+|+|||.||+|++|+++
T Consensus 375 --------------------------~~~~h~~~v~~l~-~~~~~----~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 375 --------------------------TLNAHEHFVTSLD-FHKTA----PYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp --------------------------EEECCSSCEEEEE-ECSSS----SCEEEEETTSEEEEEC--
T ss_pred --------------------------EEcCCCCcEEEEE-EcCCC----CEEEEEeCCCcEEEEeCC
Confidence 2257999999999 76665 899999999999999964
No 3
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.6e-50 Score=341.90 Aligned_cols=313 Identities=19% Similarity=0.323 Sum_probs=248.0
Q ss_pred ceeccCc-ceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEE-EeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 5 AVHQFAQ-CITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLH-VLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 5 ~~~~~~~-~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
.+.+|.. .|++++|+|+|++||+|+.|+.|+|||+.++...... ...+|...|.+++|+|++++|++++.|+++++|+
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 4667877 9999999999999999999999999999987433333 3468999999999999999999999999999999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 162 (379)
+..+.......+.+|...|.+++|+|++++|++++.|+.|++||++..........+ ..|...|.+++|+|++++|+++
T Consensus 90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 90 KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp ECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEEE
T ss_pred ccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEEE
Confidence 988765555556789999999999999999999999999999999887654445555 7899999999999999999999
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCccc--ceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc--
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG--EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP-- 238 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~-- 238 (379)
+.|+.|++||+ ..+ .+...+.+|...|.+++|+|+|++|++++.|+.|++||......
T Consensus 169 s~d~~i~~w~~------------------~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~ 230 (345)
T 3fm0_A 169 SYDDTVKLYRE------------------EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQ 230 (345)
T ss_dssp ETTSCEEEEEE------------------ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTT
T ss_pred eCCCcEEEEEe------------------cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCc
Confidence 99999999997 223 35577889999999999999999999999999999999643211
Q ss_pred ------------eeeeeee-ecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcc
Q 016982 239 ------------LAQNVAF-RDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFS 304 (379)
Q Consensus 239 ------------~~~~~~~-~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
++..+.+ |...|.+++|+|++.+|+ ++.|+.+++|+.+....-. .
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~-----------~---------- 289 (345)
T 3fm0_A 231 GVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ-----------Q---------- 289 (345)
T ss_dssp CCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT-----------S----------
T ss_pred cceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc-----------e----------
Confidence 1223333 778899999999988776 7789999999875432000 0
Q ss_pred cccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccccC
Q 016982 305 EAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
+.+. + ......+|...|++|+ |+|++ ..+|||||.||.|++|++.+++.+..+
T Consensus 290 ~~~~-~---------------~~~~~~~h~~~V~~v~-~~p~~---~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 290 PTFS-L---------------TAHLHQAHSQDVNCVA-WNPKE---PGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp CCEE-E---------------EEEETTSSSSCEEEEE-ECSSS---TTEEEEEETTSCEEEEEECC-------
T ss_pred eeEE-E---------------EeeecccccCcEeEeE-EeCCC---ceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 0000 0 0002358999999999 66554 159999999999999999988776543
No 4
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.8e-52 Score=360.12 Aligned_cols=360 Identities=36% Similarity=0.655 Sum_probs=263.3
Q ss_pred Ccccceec-cCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEE
Q 016982 1 MAAIAVHQ-FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSY 79 (379)
Q Consensus 1 m~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (379)
|+++.++. +.++|++++|+|++++||+|+.|+.|++||+.++.++.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred CCcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 67777666 57899999999999999999999999999999875577888999999999999999999999999999999
Q ss_pred EEeccCCc-eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeec-CCcCEEEEEEcCCCc
Q 016982 80 VWNQEGSE-WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR-HDSSVTSVAWHPNNV 157 (379)
Q Consensus 80 vw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~ 157 (379)
+||+.+++ .........|...|.+++|+|++++|++++.|+.|++||++....+.....+ .. |...|.+++|+|+++
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHL-KRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEE-CSSCCSCEEEEEECTTSS
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEe-ecccCCCeEEEEEcCCCC
Confidence 99999876 4445555779999999999999999999999999999999887643345566 45 999999999999999
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS 237 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~ 237 (379)
+|++++.|+.|++||+.....+.+....+.....+.++++..+ .|...|.+++|+|++++|++++.|+.|++||+.++.
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 9999999999999998655444444444333334567777778 899999999999999999999999999999999876
Q ss_pred ce---eeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCC-----------CCccCCCc
Q 016982 238 PL---AQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSS-----------GPKYGSQF 303 (379)
Q Consensus 238 ~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 303 (379)
.. +..+..|..+|.+++|+|++++|+++.++.+.+|.....+ |.+...++....... ....+..+
T Consensus 239 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (377)
T 3dwl_C 239 QPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESG-WAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSF 317 (377)
T ss_dssp SCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC----CCSBCCCSCCCCCCBSSSSSBCCCCCC------
T ss_pred CcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCc-eEEEeeeccccccccccccccccccccccccccc
Confidence 51 4677888999999999999999999999999999877544 554444433222211 00111111
Q ss_pred ccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeC
Q 016982 304 SEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDL 368 (379)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~ 368 (379)
+.....|...+..+... .......+|.+.|+++++++.++ .+...|+|||.||.|++||+
T Consensus 318 ~~~~~~~~~~~~~g~~~----~~~~~~~~H~~~i~~~~~~~~~~-~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 318 TALRSTFRNMDLKGSSQ----SISSLPTVHQNMIATLRPYAGTP-GNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------------CCCSSSCSSCEEEEEEEEEET-TEEEEEEEEETTSEEEEECC
T ss_pred ccccccccchhhccccc----cccccCccccceeEEEeccCCCC-CceEEEEeecCCCcEEEecC
Confidence 22224444333333221 22234567999999999776554 12237999999999999986
No 5
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.1e-49 Score=341.52 Aligned_cols=366 Identities=40% Similarity=0.736 Sum_probs=282.9
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG 85 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 85 (379)
+..|.++|++++|+|++++|++++.|+.|++||+.+++.+.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 34588999999999999999999999999999999985558899999999999999999999999999999999999999
Q ss_pred CceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 165 (379)
++.........|...|.+++|+|++++|++++.|+.|++||++..........+...|...|.+++|+|++++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 98777776677899999999999999999999999999999998875544455546789999999999999999999999
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeee
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF 245 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 245 (379)
+.|++||+.....+.+............++++..+..|...|.+++|+|++++|++++.|+.|++||+.+++ .+..+..
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~ 242 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-AVATLAS 242 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT-EEEEEEC
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-eeEEEcc
Confidence 999999975433333333333332235678888898999999999999999999999999999999998876 4577888
Q ss_pred ecCCeeeEEEecCCcEEEEEeCCCeEEEEecC-CCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccc
Q 016982 246 RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE-TGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVE 324 (379)
Q Consensus 246 ~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (379)
|..+|.+++|+|++++++++.|+.+++|+... .+.|.+...++......... ......|...+..+.......
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRG------LTARERFQNLDKKASSEGSAA 316 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------------CHHHHHHHCCCCC-------
T ss_pred CCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhh------cchhhhhhhcccccccccCcc
Confidence 88899999999999999999999999999876 35577654443221111000 001111110011111000000
Q ss_pred cccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccc-cccCCC
Q 016982 325 SSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED-LLNYHL 379 (379)
Q Consensus 325 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~-~~~~~~ 379 (379)
+......+|...|++++++++++ .++.+|+|||.||.|++|++.+++. ++.++|
T Consensus 317 ~~~~~~~~h~~~v~~~~~~~~~g-~~~~~l~s~~~Dg~i~~W~~~~~~~~~~~~~~ 371 (372)
T 1k8k_C 317 AGAGLDSLHKNSVSQISVLSGGK-AKCSQFCTTGMDGGMSIWDVRSLESALKDLKI 371 (372)
T ss_dssp --CCCSSSSSSCEEEEEEEESTT-TSCSEEEEEETTSEEEEEEHHHHHHHCTTCCC
T ss_pred ccccccccccCCcceeEEecCCC-cceeeEEEecCCCceEEEEecChhHhhhhccc
Confidence 00123358999999999776542 1227999999999999999998544 455543
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.5e-49 Score=332.04 Aligned_cols=298 Identities=14% Similarity=0.145 Sum_probs=251.9
Q ss_pred cceeccCcceeEEEeCCCC-cEEEEEecCCeEEEEEecCCc---eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEE
Q 016982 4 IAVHQFAQCITCHAWSPDH-AMVAFCPNNNEVHIYKLIQEK---WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSY 79 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (379)
.++.+|.++|++++|+|++ ++|++|+.|+.|++|++.... ..++..+.+|...|.+++|+|++++|++++.|++|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 3578999999999999965 899999999999999987532 246778999999999999999999999999999999
Q ss_pred EEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC----
Q 016982 80 VWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN---- 155 (379)
Q Consensus 80 vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---- 155 (379)
+||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||++.. ....+ .+|...|.++.|.|.
T Consensus 91 ~wd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~----~~~~~-~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 91 LWDVATGETYQRF--VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ----CLATL-LGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp EEETTTTEEEEEE--ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC----EEEEE-CCCSSCEEEEEECCC----
T ss_pred EEECCCCCeeEEE--ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eEEEE-eccCCcEEEEEEccCCCCC
Confidence 9999999865554 689999999999999999999999999999998654 24455 789999999999985
Q ss_pred --CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEEC
Q 016982 156 --NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDD 233 (379)
Q Consensus 156 --~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~ 233 (379)
+..+++++.|+.|++||+ ...+....+.+|...|.+++|+|+|++|++++.|+.|++||+
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~------------------~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~ 225 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNL------------------NQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL 225 (319)
T ss_dssp --CCEEEEEETTSCEEEEET------------------TTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred CCccEEEEEeCCCEEEEEEC------------------CcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 458999999999999997 566777888999999999999999999999999999999999
Q ss_pred CCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeecc
Q 016982 234 VGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQ 313 (379)
Q Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
.+.+. +..+. +..+|.+++|+|++.+|+++.++.+++|..+...... .+.... .
T Consensus 226 ~~~~~-~~~~~-~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~---~~~~~~----------------~----- 279 (319)
T 3frx_A 226 AAKKA-MYTLS-AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD---DLRPEF----------------A----- 279 (319)
T ss_dssp TTTEE-EEEEE-CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEE---EECCCC----------------T-----
T ss_pred CCCcE-EEEec-CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeee---ccCccc----------------c-----
Confidence 88763 45555 3568999999999999999999999999987543221 111000 0
Q ss_pred ccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 314 SKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
.....|...|.+++ |++++ ++|++|+.||.|++||+.++
T Consensus 280 --------------~~~~~~~~~v~~~~-~spdg----~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 280 --------------GYSKAAEPHAVSLA-WSADG----QTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp --------------TCCGGGCCCEEEEE-ECTTS----SEEEEEETTSCEEEEEEEEC
T ss_pred --------------ccccCcCcceeEEE-ECCCC----CEEEEeecCceEEEEEEeec
Confidence 01145778899999 87776 99999999999999999764
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-48 Score=334.39 Aligned_cols=286 Identities=15% Similarity=0.178 Sum_probs=246.9
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|.++|++++|+|++++|++|+.||.|++||+.++ +.+..+..|...|.+++|+|++++|++++.|+.+++|++.
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT--NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC--CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 57789999999999999999999999999999999887 6778888999999999999999999999999999999998
Q ss_pred CCce--eeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe
Q 016982 85 GSEW--VPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 85 ~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 162 (379)
+.+. .......+|...|.++.|++++. +++++.|+.|++||++++. ....+ .+|...|.+++|+|++++|+++
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~---~~~~~-~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ---QTTTF-TGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE---EEEEE-CCCSSCEEEEEECTTSSEEEEE
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc---EEEEE-cCCCCceEEEEECCCCCEEEEE
Confidence 7631 22334467999999999998775 8899999999999998876 45555 7899999999999999999999
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeee
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 242 (379)
+.|+.|++||+ +.+.++..+.+|...|.+++|+|++++|++++.|+.|++||++..... ..
T Consensus 203 ~~d~~v~~wd~------------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~-~~ 263 (340)
T 1got_B 203 ACDASAKLWDV------------------REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL-MT 263 (340)
T ss_dssp ETTSCEEEEET------------------TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EE
T ss_pred eCCCcEEEEEC------------------CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE-EE
Confidence 99999999997 667888899999999999999999999999999999999999886543 33
Q ss_pred eee--ecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCc
Q 016982 243 VAF--RDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVG 319 (379)
Q Consensus 243 ~~~--~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (379)
+.. +...|.+++|+|+|++|+ ++.|+.+++|+........
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~------------------------------------- 306 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG------------------------------------- 306 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-------------------------------------
T ss_pred EccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee-------------------------------------
Confidence 332 234799999999999888 5678899999876543211
Q ss_pred ccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEe
Q 016982 320 NDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWD 367 (379)
Q Consensus 320 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~ 367 (379)
.+.+|.+.|++++ |++++ .+|+|||.||.|++||
T Consensus 307 ---------~~~~h~~~v~~~~-~s~dg----~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 307 ---------VLAGHDNRVSCLG-VTDDG----MAVATGSWDSFLKIWN 340 (340)
T ss_dssp ---------EEECCSSCEEEEE-ECTTS----SCEEEEETTSCEEEEC
T ss_pred ---------EeecCCCcEEEEE-EcCCC----CEEEEEcCCccEEecC
Confidence 2258999999999 77666 8999999999999997
No 8
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7e-48 Score=329.67 Aligned_cols=305 Identities=15% Similarity=0.181 Sum_probs=248.7
Q ss_pred cceeccCcceeEEEe-----CC-CCcEEEEEecCCeEEEEEecCCc-----eEEEEEeccCCCceEEEEEcCCCCEEEEE
Q 016982 4 IAVHQFAQCITCHAW-----SP-DHAMVAFCPNNNEVHIYKLIQEK-----WEKLHVLQKHDQIVSGIDWSVRSNRIVTV 72 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~-----s~-~~~~l~~~~~dg~i~i~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 72 (379)
..+.+|.+.|++++| ++ ++++|++|+.|+.|++||+.+.+ ..+...+.+|...|.+++|+|++.+|+++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 357899999999999 77 89999999999999999997542 35677889999999999999999999999
Q ss_pred eCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEE--eecCCcCEEEE
Q 016982 73 SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLI--RKRHDSSVTSV 150 (379)
Q Consensus 73 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~~~~~~~v~~~ 150 (379)
+.|++|++||+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||+.... .... ...|...|.++
T Consensus 95 s~D~~v~lwd~~~~~~~~~~--~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRF--VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC----KFSSAEKENHSDWVSCV 168 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEE--ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE----EEECCTTTSCSSCEEEE
T ss_pred cCCCcEEEEECCCCcEEEEE--cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc----eeeeecccCCCceeeee
Confidence 99999999999998865554 6799999999999999999999999999999987432 2222 03688899999
Q ss_pred EEcCCC----------cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEE
Q 016982 151 AWHPNN----------VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLA 220 (379)
Q Consensus 151 ~~~p~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 220 (379)
+|+|++ .+|++++.|+.|++||. ..+....+..|...|.+++|+|+|++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-------------------~~~~~~~~~~h~~~v~~~~~s~~g~~l~ 229 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-------------------NFQIRYTFKAHESNVNHLSISPNGKYIA 229 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-------------------TTEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-------------------CCceeEEEcCccccceEEEECCCCCEEE
Confidence 999987 78999999999999984 2456677889999999999999999999
Q ss_pred EEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccC
Q 016982 221 YVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300 (379)
Q Consensus 221 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
+++.|+.|++||+.........+ .+...|.+++|+|++++++++.|+.+++|+........... +....
T Consensus 230 sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~-~~~~~--------- 298 (343)
T 2xzm_R 230 TGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCT-IEAEP--------- 298 (343)
T ss_dssp EEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEE-CCCCS---------
T ss_pred EEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEE-eecCc---------
Confidence 99999999999996544333443 34667999999999999999999999999976533211111 00000
Q ss_pred CCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcc
Q 016982 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQE 372 (379)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~ 372 (379)
.. ......+|...|++++ |++++ ++|++|+.||.|++|++.+++
T Consensus 299 ------~~-----------------~~~~~~~~~~~v~~~~-~sp~g----~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 299 ------IT-----------------KAEGQKGKNPQCTSLA-WNALG----KKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp ------GG-----------------GBTTBCCSCCCEEEEE-ECSSS----CCEEEEETTSEEEEEEEEEEE
T ss_pred ------ch-----------------hhhhhcCCCCceEEEE-ECCCC----CeEEEecCCceEEEEEEEccC
Confidence 00 0001247889999999 77666 899999999999999998754
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-47 Score=325.68 Aligned_cols=301 Identities=19% Similarity=0.282 Sum_probs=235.2
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEe-cc-CCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL-QK-HDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
.+.+|.++|++++|+|+ +||+|+.|+.|++|++..+.......+ .+ |...|.+++|+|++++|++++.|++|++||
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 46789999999999987 999999999999999987654566666 44 999999999999999999999999999999
Q ss_pred ccCCc-----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecC-CceeEEEEEeecCCcCEEEEEEcCCC
Q 016982 83 QEGSE-----WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQE-NNWWVSKLIRKRHDSSVTSVAWHPNN 156 (379)
Q Consensus 83 ~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~ 156 (379)
+.... ......+.+|...|.+++|+|++++|++++.|+.|++||++.. ........+ .+|...|.+++|+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPSE 165 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCCC
Confidence 85421 1223344679999999999999999999999999999999543 222344555 7899999999999999
Q ss_pred cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCC--CCEEEEEcCCCeEEEEECC
Q 016982 157 VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS--GNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 157 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~v~d~~ 234 (379)
++|++++.|+.|++||+. ....+++..+.+|...|.+++|+|+ +.+|++++.|++|++||+.
T Consensus 166 ~~l~s~s~D~~i~iW~~~----------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 166 ALLASSSYDDTVRIWKDY----------------DDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp SEEEEEETTSCEEEEEEE----------------TTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CEEEEEcCCCeEEEEECC----------------CCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 999999999999999962 0123677888999999999999998 7789999999999999986
Q ss_pred CCC-------ceeeeeee-ecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccc
Q 016982 235 GPS-------PLAQNVAF-RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEA 306 (379)
Q Consensus 235 ~~~-------~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (379)
... .....+.. |...|.+++|++++.+++++.|+.+++|+.... .|.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~-------------------- 288 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG-EWKVFAK-------------------- 288 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETT-EEEEEEE--------------------
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC-ceEEEec--------------------
Confidence 542 12233333 788999999998887777889999999987543 2332211
Q ss_pred cceeeccccccCccccccccccccccccc-ceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 307 FGKLYGQSKYGVGNDAVESSRTRGGTHVN-CINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
...+|.. .|++++ |++.. ++++|||||.||.|++|++++
T Consensus 289 ----------------------~~~~h~~~~v~~v~-~~~~~--~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 289 ----------------------RALCHGVYEINVVK-WLELN--GKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ----------------------ESCTTTTSCEEEEE-EC-------CCEEEEETTSEEEEEEC--
T ss_pred ----------------------cccccccceEEEEE-EecCC--CceEEEEecCCCcEEEEEecc
Confidence 1146876 899999 55420 238999999999999999865
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.2e-47 Score=327.51 Aligned_cols=288 Identities=14% Similarity=0.144 Sum_probs=246.7
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
..+.+|.+.|++++|+|++++||+|+.||.|++||..++ +....+..|...|.+++|+|++.+|++++.|+.+++|++
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~--~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT--NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC--CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 357899999999999999999999999999999999887 566777888999999999999999999999999999998
Q ss_pred cCCc----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC--CCc
Q 016982 84 EGSE----WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP--NNV 157 (379)
Q Consensus 84 ~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~ 157 (379)
.... ......+..|...|.+++|+|++..|++++.|++|++||++++. ....+ .+|...|.+++|+| +++
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~---~~~~~-~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ---LLQSF-HGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEE-ECCSSCEEEEEECCCSSCC
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe---EEEEE-cCCCCCeEEEEEEeCCCCC
Confidence 6431 11223345789999999999999999999999999999999887 45666 78999999999988 468
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS 237 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~ 237 (379)
+|++++.|+.|++||+ ++++++..+..|...|.+++|+|++.+|++++.|+.|++||++...
T Consensus 212 ~l~sgs~Dg~v~~wd~------------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDM------------------RSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp EEEEEETTSCEEEEET------------------TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEeCCCeEEEEEC------------------CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999997 6788889999999999999999999999999999999999998865
Q ss_pred ceeeeeeee--cCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccc
Q 016982 238 PLAQNVAFR--DLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQS 314 (379)
Q Consensus 238 ~~~~~~~~~--~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (379)
.. ..+..+ ...+.+++|+|+|++|+ ++.|+.+++|+........
T Consensus 274 ~~-~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~-------------------------------- 320 (354)
T 2pbi_B 274 EV-AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS-------------------------------- 320 (354)
T ss_dssp EE-EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE--------------------------------
T ss_pred EE-EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE--------------------------------
Confidence 33 333322 34688999999999888 5568899999976543211
Q ss_pred cccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEe
Q 016982 315 KYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWD 367 (379)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~ 367 (379)
.+.+|.+.|++++ |++++ ++|+||+.||.|++|+
T Consensus 321 --------------~l~~h~~~v~~l~-~spdg----~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 --------------ILFGHENRVSTLR-VSPDG----TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --------------EECCCSSCEEEEE-ECTTS----SCEEEEETTSEEEEEC
T ss_pred --------------EEECCCCcEEEEE-ECCCC----CEEEEEcCCCCEEecC
Confidence 2257999999999 77766 8999999999999996
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.4e-47 Score=319.08 Aligned_cols=291 Identities=15% Similarity=0.118 Sum_probs=243.8
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
.++.+|.+.|++++|+|++++|++|+.||.|++||+.++ ..+..+..|..+|.+++|+|++++|++++.|++|++||+
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 457889999999999999999999999999999999987 788889999999999999999999999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC-CCcEEEEe
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP-NNVFLATT 162 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~ 162 (379)
.+++....+ ..|...|.+++|+|++++|++++.|+.|++||++.+.. ....+ .+|...|.+++|+| ++.+|++|
T Consensus 85 ~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--~~~~~-~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 85 NTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--LEQTF-EGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp TTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE--EEEEE-CCCCSCEEEEEECTTCTTEEEEE
T ss_pred CCCcEEEEE--eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc--hhhhh-cccCCcEEEEEECCCCCCEEEEE
Confidence 999865554 67999999999999999999999999999999987642 34445 78999999999999 57899999
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECC--CCCEEEEEcCCCeEEEEECCCCCce
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSP--SGNTLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp--~~~~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
+.|+.|++||+ ....+...+ ..|...+..+.|+| ++.+|++++.|+.|++||++++. +
T Consensus 160 s~D~~v~iwd~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-~ 220 (304)
T 2ynn_A 160 CLDRTVKVWSL------------------GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-C 220 (304)
T ss_dssp ETTSEEEEEET------------------TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-E
T ss_pred eCCCeEEEEEC------------------CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-c
Confidence 99999999997 333333333 35567789999987 78899999999999999998876 5
Q ss_pred eeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccC
Q 016982 240 AQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGV 318 (379)
Q Consensus 240 ~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
+..+.+|...|..++|+|++.+|+ ++.|+.+++|+....... .
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~---~--------------------------------- 264 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE---K--------------------------------- 264 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE---E---------------------------------
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee---e---------------------------------
Confidence 588889999999999999999887 667899999997654321 1
Q ss_pred cccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 319 GNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 319 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
.+..|...+.+++++ +++ ...++++|+.|| +.+|++.+
T Consensus 265 ----------~~~~~~~~~~~~~~~-~~~--~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 265 ----------TLNVGLERSWCIATH-PTG--RKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp ----------EECCSSSSEEEEEEC-TTC--GGGCEEEEETTE-EEEEECC-
T ss_pred ----------eccCCCccEEEEEEC-CCC--CceEEEEecCCc-eEEEEecc
Confidence 124688899999954 433 123677777665 77777765
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.4e-48 Score=336.07 Aligned_cols=299 Identities=14% Similarity=0.196 Sum_probs=247.8
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|.++|++++|+|++++|++|+.||+|++||+.++ +....+..|...|.+++|+|++++|++++.|+.+++|++.
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~--~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS--QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 47899999999999999999999999999999999887 7788899999999999999999999999999999999987
Q ss_pred CCc-----eeeeEEeecCCCceeEEEECCC-CCEEEEEeCCCeEEEEEeecCCceeEEEEE----eecCCcCEEEEEEcC
Q 016982 85 GSE-----WVPTLVILRLNRAALCVQWSPK-ENKFAVGSGAKTVCICYYEQENNWWVSKLI----RKRHDSSVTSVAWHP 154 (379)
Q Consensus 85 ~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~p 154 (379)
+.. ......+.+|.+.+.++.|+|+ +..|++++.|+.|++||+.++.. ...+ ..+|...|.+++|+|
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR---ISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE---EEEECCCSSSSCCSCEEEEEECS
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE---EEEeecccCCCCccCeEEEEeec
Confidence 532 1112234678999999999996 46799999999999999998773 2222 146889999999987
Q ss_pred -CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEEC
Q 016982 155 -NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDD 233 (379)
Q Consensus 155 -~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~ 233 (379)
++++|++|+.|+.|++||+. .....+..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~-----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLR-----------------ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETT-----------------TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred CCCCEEEEEECCCeEEEEECC-----------------CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence 78999999999999999972 345677888999999999999999999999999999999999
Q ss_pred CCCCceeeeeeeec-------CCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCccc
Q 016982 234 VGPSPLAQNVAFRD-------LPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSE 305 (379)
Q Consensus 234 ~~~~~~~~~~~~~~-------~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (379)
+++... ..+..+. ..+++++|+|+|++|+ ++.|+.+++|+...........
T Consensus 279 ~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~-------------------- 337 (380)
T 3iz6_a 279 RTGHQL-QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG-------------------- 337 (380)
T ss_dssp TTTEEE-EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC--------------------
T ss_pred CCCcEE-EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe--------------------
Confidence 987643 4443322 2489999999999888 5578899999876543211110
Q ss_pred ccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccc
Q 016982 306 AFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED 373 (379)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~ 373 (379)
....+|.+.|++++ |++++ .+|+|||.||.|++|++...+.
T Consensus 338 ----------------------~~~~~h~~~v~~l~-~s~dg----~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 338 ----------------------TLQNSHEGRISCLG-LSSDG----SALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp ----------------------CSCSSCCCCCCEEE-ECSSS----SEEEEECTTSCEEEEECCSSSS
T ss_pred ----------------------cccCCCCCceEEEE-ECCCC----CEEEEeeCCCCEEEEecCCCcc
Confidence 01257999999999 77766 8999999999999999987643
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=325.72 Aligned_cols=291 Identities=14% Similarity=0.170 Sum_probs=230.7
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCC---------ceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE---------KWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR 76 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 76 (379)
...|...|.+++|+|||++|++++ |+++++||.... ..........|...|.+++|+|++ .|++++.||
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg 103 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG 103 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC
Confidence 345678899999999999999887 677888864311 000111112356689999999985 788999999
Q ss_pred eEEEEeccCCceeeeE--EeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC
Q 016982 77 NSYVWNQEGSEWVPTL--VILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP 154 (379)
Q Consensus 77 ~i~vw~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 154 (379)
+|++||+.+++..... ...+|...|++++|+|++++|++|+.|+.|++||++++. ....+ .+|...|.+++|+|
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~---~~~~~-~~h~~~V~~~~~~~ 179 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV---VLSSY-RAHAAQVTCVAASP 179 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEE-CCCSSCEEEEEECS
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc---EEEEE-cCcCCceEEEEecC
Confidence 9999999988754433 345799999999999999999999999999999999876 45666 88999999999999
Q ss_pred CC-cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee--cCCcceEEEEECC-CCCEEEEEcCCCeEEE
Q 016982 155 NN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD--LSFSWAFGVKWSP-SGNTLAYVGHNSMIYF 230 (379)
Q Consensus 155 ~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp-~~~~l~~~~~d~~i~v 230 (379)
++ .+|++++.|+.|++||+ +++++...+. .+...+.+++|+| ++++|++|+.|+.|++
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~------------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDT------------------RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp SCTTEEEEEETTSCEEEEET------------------TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCceeeeccccccccccc------------------cccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEE
Confidence 88 57899999999999997 5566666653 3455789999999 4678899999999999
Q ss_pred EECCCCCceeeeeeeecCCeeeEEEecCC-cEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccc
Q 016982 231 VDDVGPSPLAQNVAFRDLPLRDVLFVSEK-MVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFG 308 (379)
Q Consensus 231 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (379)
||+++++. +..+.+|...|++++|+|++ ++|+ ++.|+.+++|+..... +.
T Consensus 242 wd~~~~~~-~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---~~------------------------ 293 (344)
T 4gqb_B 242 VDTKSTSC-VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---LF------------------------ 293 (344)
T ss_dssp EESCC--C-CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---EE------------------------
T ss_pred EECCCCcE-EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---EE------------------------
Confidence 99998764 57888999999999999997 5666 6788999999865432 11
Q ss_pred eeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcc
Q 016982 309 KLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQE 372 (379)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~ 372 (379)
.+.+|.+.|++++ |++++ ..+|+|||.||+|++|++.+..
T Consensus 294 --------------------~~~~H~~~V~~v~-~sp~~---~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 294 --------------------RSQAHRDFVRDAT-WSPLN---HSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp --------------------EECCCSSCEEEEE-ECSSS---TTEEEEEETTSCEEEEECCC--
T ss_pred --------------------EEcCCCCCEEEEE-EeCCC---CeEEEEEcCCCeEEEEECCCCC
Confidence 1157999999999 77665 2578899999999999998754
No 14
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.8e-46 Score=318.24 Aligned_cols=302 Identities=14% Similarity=0.143 Sum_probs=249.8
Q ss_pred ceeccCcceeEEEeCCC-CcEEEEEecCCeEEEEEecCCc---eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEE
Q 016982 5 AVHQFAQCITCHAWSPD-HAMVAFCPNNNEVHIYKLIQEK---WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYV 80 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 80 (379)
+|.+|.+.|++++|+|+ +++||+|+.|++|+|||+.+.+ ..+...+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 47899999999999997 6899999999999999997642 3567888999999999999999999999999999999
Q ss_pred EeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC--cE
Q 016982 81 WNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN--VF 158 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~ 158 (379)
|+.......... ..+...+..+.+++++++|++++.|+.+++||...... .......|...+..++|++++ .+
T Consensus 113 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 113 WDLTTGTTTRRF--VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---YTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EETTTTEEEEEE--ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---EEECSSSCSSCEEEEEECSCSSSCE
T ss_pred Eeecccceeeee--cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---EEEEeccccCcccceEEccCCCCcE
Confidence 999988754444 55778889999999999999999999999999876542 222226788999999999875 67
Q ss_pred EEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 159 LATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 159 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
+++++.|+.|++||+ ..++++..+.+|...|++++|+|++++|++++.|+.|++||+++.+.
T Consensus 188 ~~s~~~d~~i~i~d~------------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 188 IVSCGWDKLVKVWNL------------------ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp EEEEETTSCEEEEET------------------TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEcCCCEEEEEEC------------------CCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 889999999999997 67788888999999999999999999999999999999999988764
Q ss_pred eeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccC
Q 016982 239 LAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGV 318 (379)
Q Consensus 239 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
+..+. +...+..++|+|++.+++++.|+.+++|+......... +....
T Consensus 250 -~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~---~~~~~--------------------------- 297 (340)
T 4aow_A 250 -LYTLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDE---LKQEV--------------------------- 297 (340)
T ss_dssp -EEEEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEE---ECCC----------------------------
T ss_pred -eeeec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEe---ccccc---------------------------
Confidence 35554 45689999999999999999999999999775432211 11100
Q ss_pred cccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccc
Q 016982 319 GNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED 373 (379)
Q Consensus 319 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~ 373 (379)
......+|...|++++ |++++ ++|+||+.||.|+|||+.+|+.
T Consensus 298 -------~~~~~~~h~~~v~~l~-~s~dg----~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 298 -------ISTSSKAEPPQCTSLA-WSADG----QTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp -------------CCCCCEEEEE-ECTTS----SEEEEEETTSCEEEEEEEC---
T ss_pred -------eeeeccCCCCCEEEEE-ECCCC----CEEEEEeCCCEEEEEeCCCcCC
Confidence 0002257999999999 77666 8999999999999999999863
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-46 Score=324.13 Aligned_cols=289 Identities=17% Similarity=0.206 Sum_probs=237.3
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCC------------------CceEEEEEcCCCCE
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHD------------------QIVSGIDWSVRSNR 68 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~ 68 (379)
.+|.+.|++++|+|+|++||+|+ ++.+++|++.++ +.+..+..|. ..|.+++|+|++++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 46999999999999999999986 689999999887 4555555443 24999999999999
Q ss_pred EEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEE
Q 016982 69 IVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVT 148 (379)
Q Consensus 69 l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~ 148 (379)
|++++.|+.|++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||++++. ....+ .+...+.
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~---~~~~~--~~~~~v~ 210 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMIL--QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ---CSLTL--SIEDGVT 210 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEE--ECSSCEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEE--ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe---eEEEE--EcCCCcE
Confidence 999999999999999998755544 7899999999999999999999999999999998876 33333 4677899
Q ss_pred EEEEcC-CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-------ecCCcceEEEEECCCCCEEE
Q 016982 149 SVAWHP-NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-------DLSFSWAFGVKWSPSGNTLA 220 (379)
Q Consensus 149 ~~~~~p-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~sp~~~~l~ 220 (379)
+++|+| ++++|++++.|+.|++||+ .++..+..+ .+|...|.+++|+|+|++|+
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~------------------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 272 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDS------------------ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 272 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEET------------------TTCCEEEEEC------CCCSSCEEEEEECTTSSEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEC------------------CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE
Confidence 999999 8899999999999999997 445555444 57888999999999999999
Q ss_pred EEcCCCeEEEEECCCCC-----------ceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEec
Q 016982 221 YVGHNSMIYFVDDVGPS-----------PLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLD 288 (379)
Q Consensus 221 ~~~~d~~i~v~d~~~~~-----------~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~ 288 (379)
+++.|+.|++||++... .+...+.+|...|.+++|+|++++|+ ++.|+.+++|+........
T Consensus 273 s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~------ 346 (393)
T 1erj_A 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL------ 346 (393)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE------
T ss_pred EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE------
Confidence 99999999999987632 23345667889999999999999887 6678899999876543221
Q ss_pred ccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccC--CcccceEEEeecCceEEEE
Q 016982 289 ERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAG--SSRITRFTTSGLDGKIVTW 366 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~~~~~l~t~~~Dg~v~iW 366 (379)
.+.+|.+.|.+++ +.++. .|++++|||||.||+|++|
T Consensus 347 ----------------------------------------~l~~h~~~v~~v~-~~~~~~~~p~~~~l~sgs~Dg~i~iW 385 (393)
T 1erj_A 347 ----------------------------------------MLQGHRNSVISVA-VANGSSLGPEYNVFATGSGDCKARIW 385 (393)
T ss_dssp ----------------------------------------EEECCSSCEEEEE-ECSSCTTCTTCEEEEEEETTSEEEEE
T ss_pred ----------------------------------------EECCCCCCEEEEE-ecCCcCcCCCCCEEEEECCCCcEEEC
Confidence 2257999999999 54421 2456899999999999999
Q ss_pred eCCC
Q 016982 367 DLES 370 (379)
Q Consensus 367 ~~~~ 370 (379)
++..
T Consensus 386 ~~~~ 389 (393)
T 1erj_A 386 KYKK 389 (393)
T ss_dssp EEEE
T ss_pred cccc
Confidence 9865
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-47 Score=328.90 Aligned_cols=290 Identities=17% Similarity=0.230 Sum_probs=227.5
Q ss_pred eeccCcceeEEEeCCCCcEEEEEec------CCeEEEEEecCCce--EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCe
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPN------NNEVHIYKLIQEKW--EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (379)
...|...|++++|||||++||+|+. |+.|++|+..++.. .......+|...|.+++|+|+++ +++++.|++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence 4568999999999999999999987 77899998766421 11233456888999999999975 556788999
Q ss_pred EEEEeccCCceee--eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC
Q 016982 78 SYVWNQEGSEWVP--TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN 155 (379)
Q Consensus 78 i~vw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 155 (379)
|++||+.+++... .+...+|...|.+++|+|++++|++++.|+.|++||++++. ....+ ..|...|.+++|+|+
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~---~~~~~-~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA---VLKSY-NAHSSEVNCVAACPG 192 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE---EEEEE-CCCSSCEEEEEECTT
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc---EEEEE-cCCCCCEEEEEEccC
Confidence 9999998876433 23345789999999999999999999999999999998876 45566 789999999999998
Q ss_pred C-cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe--ecCCcceEEEEECCC-CCEEEEEcCCCeEEEE
Q 016982 156 N-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL--DLSFSWAFGVKWSPS-GNTLAYVGHNSMIYFV 231 (379)
Q Consensus 156 ~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~-~~~l~~~~~d~~i~v~ 231 (379)
+ .++++++.|+.|++||+ ++++++..+ ..+...+.+++|+|+ +.+|++++.|+.|++|
T Consensus 193 ~~~~~~s~~~dg~v~~wd~------------------~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDT------------------RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp CSSCEEEEETTSCEEECCT------------------TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred CCceeeeeccCCceEEEEC------------------CCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 7 57899999999999997 344444333 345677999999997 5688899999999999
Q ss_pred ECCCCCceeeeeeeecCCeeeEEEecCC-cEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccce
Q 016982 232 DDVGPSPLAQNVAFRDLPLRDVLFVSEK-MVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGK 309 (379)
Q Consensus 232 d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (379)
|+++++. ...+..|...|++++|+|++ ++|+ ++.|+.+++|+.+... ...
T Consensus 255 d~~~~~~-~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---~~~------------------------ 306 (357)
T 4g56_B 255 NIKNPDS-AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---VFR------------------------ 306 (357)
T ss_dssp ESSCGGG-CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---EEE------------------------
T ss_pred ECCCCcE-eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---EeE------------------------
Confidence 9998764 47888899999999999987 5676 6678999999876532 111
Q ss_pred eeccccccCcccccccccccccccccceeeeeeecc-cCCcccceEEEeecCceEEEEeCCCc
Q 016982 310 LYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLRE-AGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
..+|.+.|++|+ |+| ++ .+|+|||.||+|++|++.+.
T Consensus 307 --------------------~~~H~~~V~~va-fsP~d~----~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 307 --------------------DLSHRDFVTGVA-WSPLDH----SKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp --------------------ECCCSSCEEEEE-ECSSST----TEEEEEETTSCEEEEECC--
T ss_pred --------------------ECCCCCCEEEEE-EeCCCC----CEEEEEcCCCeEEEEECCCC
Confidence 136999999999 665 55 89999999999999999763
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.6e-46 Score=342.04 Aligned_cols=315 Identities=13% Similarity=0.168 Sum_probs=244.8
Q ss_pred ceeccCcceeEEEeCCCCc-EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 5 AVHQFAQCITCHAWSPDHA-MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
.+.+|...|++++|+|++. +|++|+.|+.|++||..+. +....+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 4678999999999999987 6999999999999998776 778889999999999999999999999999999999999
Q ss_pred cCCceeeeEEe-----ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCcee------------------------
Q 016982 84 EGSEWVPTLVI-----LRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW------------------------ 134 (379)
Q Consensus 84 ~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~------------------------ 134 (379)
.+++....+.. ..|...|.+++|+|++++|++++.|++|++||+.+++...
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 98875554421 1689999999999999999999999999999987654211
Q ss_pred ----------------EEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCC-----------
Q 016982 135 ----------------VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGT----------- 187 (379)
Q Consensus 135 ----------------~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------- 187 (379)
....+ .+|...|.+++|+|++++|++++.|+.|++||+..............
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~-~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVR-YGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EeCCCcEEEEeCCCCCcceEE-cCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 11222 57899999999999999999999999999999853221100000000
Q ss_pred ----------------------cc------C----------Cccc----------------ceEEEeecCCcceEEEEEC
Q 016982 188 ----------------------SS------D----------TKFG----------------EQILQLDLSFSWAFGVKWS 213 (379)
Q Consensus 188 ----------------------~~------~----------~~~~----------------~~~~~~~~~~~~v~~~~~s 213 (379)
.. . ...+ ..+..+. |...+.+++|+
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~-~~~~v~~va~s 457 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP-ISYNSSCVALS 457 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE-CSSCEEEEEEC
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee-cCCCceEEEEe
Confidence 00 0 0000 0011121 45568899999
Q ss_pred CCCCEEEEEcCCCeEEEEECCCCCc-eeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccc
Q 016982 214 PSGNTLAYVGHNSMIYFVDDVGPSP-LAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERK 291 (379)
Q Consensus 214 p~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~ 291 (379)
|+|++|++++.|+.|++||+.+... .... ..|...|++++|+|+|++|+ ++.|+.+++|+....+ +...
T Consensus 458 pdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~--~~~~------ 528 (611)
T 1nr0_A 458 NDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF--ELAH------ 528 (611)
T ss_dssp TTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT--EESC------
T ss_pred CCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC--ceee------
Confidence 9999999999999999999876532 1233 57889999999999999998 6678899999876532 1100
Q ss_pred cCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 292 TSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
. ..+.+|...|++++ |+|++ ++|||||.|++|++|++.++
T Consensus 529 ----------------~-------------------~~~~~H~~~V~~v~-fspdg----~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 529 ----------------T-------------------NSWTFHTAKVACVS-WSPDN----VRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp ----------------C-------------------CCCCCCSSCEEEEE-ECTTS----SEEEEEETTSCEEEEETTCT
T ss_pred ----------------e-------------------eeeeecccceeEEE-ECCCC----CEEEEEECCCcEEEEECCCc
Confidence 0 01235999999999 87776 99999999999999999875
Q ss_pred c
Q 016982 372 E 372 (379)
Q Consensus 372 ~ 372 (379)
+
T Consensus 569 ~ 569 (611)
T 1nr0_A 569 S 569 (611)
T ss_dssp T
T ss_pred c
Confidence 4
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.3e-45 Score=308.57 Aligned_cols=288 Identities=17% Similarity=0.250 Sum_probs=243.4
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
..+.+|..+|++++|+|++++|++|+.||.|++|+..++ +....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc--ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 346789999999999999999999999999999999887 567788999999999999999999999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.+++....+ ..|...|.+++|+|++++|++++.|+.|++||+++.. ....+ ..|..+|.+++|+|++++|++++
T Consensus 95 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~-~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 95 SSGKCLKTL--KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK---CLKTL-PAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp TTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE---EEEEe-cCCCCcEEEEEEcCCCCEEEEEe
Confidence 999866555 6789999999999999999999999999999998876 45555 78999999999999999999999
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeee
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 242 (379)
.|+.|++||+ ..++.+..+ ..+...+..++|+|++++|++++.|+.|++||+.+++ ....
T Consensus 169 ~d~~i~~wd~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~ 229 (312)
T 4ery_A 169 YDGLCRIWDT------------------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK-CLKT 229 (312)
T ss_dssp TTSCEEEEET------------------TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE-EEEE
T ss_pred CCCcEEEEEC------------------CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEE
Confidence 9999999997 556666555 3456679999999999999999999999999998876 3466
Q ss_pred eeeecCCeee--EEEe-cCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccC
Q 016982 243 VAFRDLPLRD--VLFV-SEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGV 318 (379)
Q Consensus 243 ~~~~~~~i~~--~~~s-~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
+..|...... ..++ +++.+|+ ++.|+.+++|+........
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~------------------------------------ 273 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ------------------------------------ 273 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE------------------------------------
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh------------------------------------
Confidence 6666554332 3444 5677777 5678899999977643221
Q ss_pred cccccccccccccccccceeeeeeecccCCcccceEEEee--cCceEEEEeCC
Q 016982 319 GNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG--LDGKIVTWDLE 369 (379)
Q Consensus 319 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~--~Dg~v~iW~~~ 369 (379)
.+.+|.+.|.+++ +.+++ ++|++++ .|+.|++|+..
T Consensus 274 ----------~~~~h~~~v~~~~-~~p~~----~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 274 ----------KLQGHTDVVISTA-CHPTE----NIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ----------EECCCSSCEEEEE-ECSSS----SEEEEEECTTTCCEEEEECC
T ss_pred ----------hhhccCCcEEEEe-ecCcC----CceEEEEccCCccEEEecCC
Confidence 2257999999999 66555 8999987 69999999964
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.4e-45 Score=337.27 Aligned_cols=329 Identities=11% Similarity=0.144 Sum_probs=250.7
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
..+.+.+.+++|+|+|++||+++ ++.|++|++.++ +....+.+|...|++++|+|+|++|++++.|++|+|||+.++
T Consensus 15 ~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~--~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~ 91 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL--TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT 91 (611)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCS--SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST
T ss_pred CcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCc--ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCC
Confidence 34578899999999999999987 569999999876 567788999999999999999999999999999999999766
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCC----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc-EEEE
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV-FLAT 161 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~ 161 (379)
+......+..|.+.|.+++|+|+++.|++++.+ +.|++||. +. ....+ .+|...|.+++|+|++. .|++
T Consensus 92 ~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~---~~~~l-~gh~~~v~~v~f~p~~~~~l~s 165 (611)
T 1nr0_A 92 THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GT---SNGNL-TGQARAMNSVDFKPSRPFRIIS 165 (611)
T ss_dssp TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CC---BCBCC-CCCSSCEEEEEECSSSSCEEEE
T ss_pred cceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CC---Cccee-cCCCCCceEEEECCCCCeEEEE
Confidence 544444556789999999999999999998865 36777763 33 23344 78999999999999986 6999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQ 241 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~ 241 (379)
++.|+.|++||. ...++...+.+|...|.+++|+|+|++|++++.|+.|++||+.++.. ..
T Consensus 166 ~s~D~~v~lwd~------------------~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~-~~ 226 (611)
T 1nr0_A 166 GSDDNTVAIFEG------------------PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK-TG 226 (611)
T ss_dssp EETTSCEEEEET------------------TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EE
T ss_pred EeCCCeEEEEEC------------------CCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE-ee
Confidence 999999999996 56778888999999999999999999999999999999999987764 34
Q ss_pred eee-------eecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCC-----CCCccCCCcccccc
Q 016982 242 NVA-------FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSS-----SGPKYGSQFSEAFG 308 (379)
Q Consensus 242 ~~~-------~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 308 (379)
.+. +|...|.+++|+|+|++|+ ++.|+.+++|+.................... ..............
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 442 6889999999999999887 6778999999987643222211000000000 00000000000000
Q ss_pred eeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 309 KLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
+++ ... .......+.+|...|++++ |++++ ++|+|++.||.|++||+.+++....
T Consensus 307 ~~~-~~~-------~~~~~~~~~gh~~~v~~l~-~spdg----~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 307 NFV-NPE-------LGSIDQVRYGHNKAITALS-SSADG----KTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp EEE-ETT-------TTEEEEEECCCSSCEEEEE-ECTTS----SEEEEEETTSCEEEEETTTCCEEEC
T ss_pred EEE-eCC-------CCCcceEEcCCCCCEEEEE-EeCCC----CEEEEEeCCCcEEEEECCCCceeee
Confidence 000 000 0011224578999999999 77666 8999999999999999998766543
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-43 Score=307.14 Aligned_cols=311 Identities=18% Similarity=0.201 Sum_probs=246.1
Q ss_pred ccceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 3 AIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 3 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
...+.+|.+.|++++|+|++++|++++.||.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 4568899999999999999999999999999999999887 68888999999999999999999999999999999999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CeEEEEEeecCCceeE--------EEEEeecCCc--CE
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA-----KTVCICYYEQENNWWV--------SKLIRKRHDS--SV 147 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~--------~~~~~~~~~~--~v 147 (379)
+.+++....+. +...+.+++|+|+++++++++.+ +.|++||+........ ...+ ..|.. .+
T Consensus 103 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 178 (369)
T 3zwl_B 103 VSNGQCVATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI-ITHEGLDAA 178 (369)
T ss_dssp TTTCCEEEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-ECCTTCCCE
T ss_pred CCCCcEEEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-cCCcCccce
Confidence 99998666553 78899999999999999999998 9999999987652111 1222 34555 89
Q ss_pred EEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcc-cceEEEeecCCcceEEEEECCCCCEEEEEcCCC
Q 016982 148 TSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKF-GEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNS 226 (379)
Q Consensus 148 ~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~ 226 (379)
.+++|+|++++|++++.||.|++||+ .. ...+..+..|...|.+++|+|++++|++++.|+
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 240 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDV------------------SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT 240 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEET------------------TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEEC------------------CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCc
Confidence 99999999999999999999999997 34 677888888999999999999999999999999
Q ss_pred eEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCccc
Q 016982 227 MIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSE 305 (379)
Q Consensus 227 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (379)
.|++||+.+... ...+. +..++..++|+|++++++ ++.++...++.......-......+....
T Consensus 241 ~i~v~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~------------- 305 (369)
T 3zwl_B 241 NSFLVDVSTLQV-LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE------------- 305 (369)
T ss_dssp EEEEEETTTCCE-EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC-------------
T ss_pred eEEEEECCCCce-eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC-------------
Confidence 999999988763 35554 678899999999999888 44555433333221110000010000000
Q ss_pred ccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 306 AFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
. ....+.+|...|++++ |++++ ++|+|++.||.|++|+++++.....
T Consensus 306 --~-----------------~~~~~~~~~~~v~~~~-~s~~~----~~l~s~~~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 306 --E-----------------EIGRVQGHFGPLNTVA-ISPQG----TSYASGGEDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp --C-----------------EEEEEECCSSCEEEEE-ECTTS----SEEEEEETTSEEEEEEECHHHHTCC
T ss_pred --c-----------------chhheecccCcEEEEE-ECCCC----CEEEEEcCCCeEEEEECccccchhH
Confidence 0 0012357999999999 77666 8999999999999999988665443
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.6e-44 Score=329.30 Aligned_cols=279 Identities=20% Similarity=0.327 Sum_probs=242.6
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++++|++++.|+.|++||.... .+..+.+|...|.+++|+|++++|++++.|+.|++||..
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~ 374 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 374 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC---eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC
Confidence 45679999999999999999999999999999998764 566788999999999999999999999999999999965
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
++.... +..|...|.+++|+|++++|++++.|+.|++||... + ....+ ..|...|.+++|+|++++|++++.
T Consensus 375 -~~~~~~--~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-~---~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 375 -GQLLQT--LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q---LLQTL-TGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp -CCEEEE--EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-C---EEEEE-ECCSSCEEEEEECTTSSEEEEEET
T ss_pred -CCEEEE--ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-C---EEEEe-cCCCCCeEEEEECCCCCEEEEEcC
Confidence 443343 367899999999999999999999999999999543 2 35555 789999999999999999999999
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA 244 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 244 (379)
|+.|++||. .++.+..+..|...|.+++|+|++++|++++.|+.|++||.. + ++++.+.
T Consensus 447 d~~v~~w~~-------------------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~-~~~~~~~ 505 (577)
T 2ymu_A 447 DKTVKLWNR-------------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQTLT 505 (577)
T ss_dssp TSEEEEEET-------------------TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-S-CEEEEEE
T ss_pred CCEEEEEEC-------------------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-C-CEEEEEe
Confidence 999999984 467788889999999999999999999999999999999954 3 3568888
Q ss_pred eecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccccc
Q 016982 245 FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAV 323 (379)
Q Consensus 245 ~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (379)
+|...|++++|+|+|++|+ ++.|+.+++|+.+.. ...
T Consensus 506 ~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~----~~~-------------------------------------- 543 (577)
T 2ymu_A 506 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQ-------------------------------------- 543 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC----EEE--------------------------------------
T ss_pred CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC----EEE--------------------------------------
Confidence 9999999999999999888 667889999985421 111
Q ss_pred ccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEe
Q 016982 324 ESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWD 367 (379)
Q Consensus 324 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~ 367 (379)
.+.+|.+.|++++ |++++ ++|+|+|.||+|++||
T Consensus 544 -----~~~~h~~~v~~~~-fs~dg----~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 544 -----TLTGHSSSVWGVA-FSPDG----QTIASASSDKTVKLWN 577 (577)
T ss_dssp -----EEECCSSCEEEEE-ECTTS----SCEEEEETTSCEEEEC
T ss_pred -----EEcCCCCCEEEEE-EcCCC----CEEEEEeCCCEEEEeC
Confidence 2258999999999 77776 8999999999999997
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-44 Score=336.86 Aligned_cols=311 Identities=15% Similarity=0.188 Sum_probs=245.3
Q ss_pred ceeccCcceeEEEeCCCC-cEEEEEecCCeEEEEEecCCc---eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEE
Q 016982 5 AVHQFAQCITCHAWSPDH-AMVAFCPNNNEVHIYKLIQEK---WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYV 80 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 80 (379)
.+.+|.+.|++++|+|++ ++|++|+.|+.|++|++.+.. ......+.+|...|.+++|+|++++|++++.|++|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 577899999999999865 799999999999999997532 2456788999999999999999999999999999999
Q ss_pred EeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC--cE
Q 016982 81 WNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN--VF 158 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~ 158 (379)
||+.++.....+ ..|...|.+++|+|++++|++++.|+.|++||............. .+|...|.+++|+|++ ..
T Consensus 457 wd~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 457 WDLAAGVSTRRF--VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EETTTTEEEEEE--ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSST-TSCSSCEEEEEECSCSSSCE
T ss_pred EECCCCcceeEE--eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCC-CCCCCcEEEEEEeCCCCcce
Confidence 999998865554 689999999999999999999999999999997654311111111 4688899999999987 68
Q ss_pred EEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 159 LATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 159 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
|++++.|+.|++||+ ...++...+.+|...|++++|+|++++|++++.|+.|++||+.+++.
T Consensus 534 l~s~s~d~~v~vwd~------------------~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 534 IVSASWDKTVKVWNL------------------SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp EEEEETTSCEEEEET------------------TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred EEEEeCCCeEEEEEC------------------CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 999999999999997 56778888999999999999999999999999999999999988764
Q ss_pred eeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccC
Q 016982 239 LAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGV 318 (379)
Q Consensus 239 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
+ ..+. +...+.+++|+|++.+|+++.++.+++|+......... +.......... . ...+
T Consensus 596 ~-~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~---~~~~~~~~~~~------------~---~~~~- 654 (694)
T 3dm0_A 596 L-YSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVED---LKVDLKAEAEK------------A---DNSG- 654 (694)
T ss_dssp E-ECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEE---ECCCCC--------------------------
T ss_pred E-EEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhh---hcccccccccc------------c---cccc-
Confidence 3 4444 45679999999999999999999999999876542222 11100000000 0 0000
Q ss_pred cccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 319 GNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 319 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
......|.-.+++++ |++++ ++|+||+.||.|++|++..
T Consensus 655 --------~~~~~~~~~~~~~l~-~spdg----~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 655 --------PAATKRKVIYCTSLN-WSADG----STLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp --------------CCCCEEEEE-ECTTS----SEEEEEETTSEEEEEEC--
T ss_pred --------cccCCceeEEeeeEE-EcCCC----CEEEEEcCCCeEEEEeccC
Confidence 000112334578888 77766 9999999999999999853
No 23
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-43 Score=297.31 Aligned_cols=258 Identities=13% Similarity=0.142 Sum_probs=220.6
Q ss_pred EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 45 EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
+...++.+|.+.|.+++|+|++++|++++.|++|++||+.++.....+ ..|..+|.+++|+|++++|++++.|+.|++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI--QVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE--ECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe--eccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 456778899999999999999999999999999999999998865555 668899999999999999999999999999
Q ss_pred EEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCccc-ceEEEeecC
Q 016982 125 CYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG-EQILQLDLS 203 (379)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 203 (379)
||+++++ ....+ .+|...|.+++|+|++++|++++.|+.|++||+ ..+ .....+.+|
T Consensus 82 wd~~~~~---~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~------------------~~~~~~~~~~~~h 139 (304)
T 2ynn_A 82 FNYNTGE---KVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW------------------ENNWALEQTFEGH 139 (304)
T ss_dssp EETTTCC---EEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEG------------------GGTTEEEEEECCC
T ss_pred EECCCCc---EEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEEC------------------CCCcchhhhhccc
Confidence 9999887 45556 789999999999999999999999999999997 333 455678899
Q ss_pred CcceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEec--CCcEEE-EEeCCCeEEEEecCCC
Q 016982 204 FSWAFGVKWSP-SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVS--EKMVIG-VGFDCNPMVFAADETG 279 (379)
Q Consensus 204 ~~~v~~~~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~-~~~d~~~~i~~~~~~~ 279 (379)
...|.+++|+| ++.+|++++.|+.|++||+............+...+..+.|+| ++.+|+ ++.|+.+++|+.....
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 99999999999 6889999999999999999887655444455667899999987 666776 7789999999976543
Q ss_pred cEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeec
Q 016982 280 IWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGL 359 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~ 359 (379)
... .+.+|...|.+++ |++++ ++|+||+.
T Consensus 220 ~~~----------------------------------------------~~~~h~~~v~~~~-~~p~~----~~l~s~s~ 248 (304)
T 2ynn_A 220 CVA----------------------------------------------TLEGHMSNVSFAV-FHPTL----PIIISGSE 248 (304)
T ss_dssp EEE----------------------------------------------EEECCSSCEEEEE-ECSSS----SEEEEEET
T ss_pred cce----------------------------------------------eeCCCCCCEEEEE-ECCCC----CEEEEEcC
Confidence 111 2257999999999 76665 89999999
Q ss_pred CceEEEEeCCCccccccC
Q 016982 360 DGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 360 Dg~v~iW~~~~~~~~~~~ 377 (379)
||.|++||+.+++.++.+
T Consensus 249 Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 249 DGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp TSCEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCceeeec
Confidence 999999999998877654
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-43 Score=296.16 Aligned_cols=267 Identities=17% Similarity=0.256 Sum_probs=220.5
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC--CCEEEEEeCCCeEEEE
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR--SNRIVTVSHDRNSYVW 81 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw 81 (379)
..+.+|.+.|++++|+|+|++||+|+.|+.|+||++.+...+.+.++.+|..+|.+++|+|+ +++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 35678999999999999999999999999999999986544677889999999999999864 8899999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC----
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN---- 155 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---- 155 (379)
|+.+++.........|...|.+++|+|+ +.+|++++.|+.|++||++...... ...+ .+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~-~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIII-DAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEE-ECCSSCEEEEEECCCC---
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeee-ecccCccceEeecCCcccc
Confidence 9998764444555678999999999997 8999999999999999998764211 2334 789999999999997
Q ss_pred ---------CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCC---CEEEEEc
Q 016982 156 ---------NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSG---NTLAYVG 223 (379)
Q Consensus 156 ---------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~l~~~~ 223 (379)
+++|++++.|+.|++||+... .........+.+|...|.+++|+|++ .+|++++
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~--------------~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSD--------------AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETT--------------TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCC--------------CceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 479999999999999997200 01122566788999999999999984 8999999
Q ss_pred CCCeEEEEECCCCCc--eeeee--eeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEE
Q 016982 224 HNSMIYFVDDVGPSP--LAQNV--AFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKF 286 (379)
Q Consensus 224 ~d~~i~v~d~~~~~~--~~~~~--~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~ 286 (379)
.|++|++||+..... ....+ ..|...|.+++|+|+|++|+ ++.|+.+++|+....+.|.....
T Consensus 227 ~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~ 294 (297)
T 2pm7_B 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGE 294 (297)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC--
T ss_pred CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEeccc
Confidence 999999999876431 11223 35678899999999999888 67889999999987788876543
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.2e-43 Score=321.29 Aligned_cols=287 Identities=20% Similarity=0.329 Sum_probs=247.5
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++++|++++.|+.|++|+... +....+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 257 ~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~ 333 (577)
T 2ymu_A 257 TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 333 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 4567899999999999999999999999999999765 4677889999999999999999999999999999999987
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
.... .....|...+.+++|+|+++++++++.|+.+++|+... + ....+ ..|...|.+++|+|++++|++++.
T Consensus 334 ~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~---~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~ 405 (577)
T 2ymu_A 334 GQHL---QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-Q---LLQTL-TGHSSSVRGVAFSPDGQTIASASD 405 (577)
T ss_dssp SCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-C---EEEEE-ECCSSCEEEEEECTTSSCEEEEET
T ss_pred CCee---EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-C---EEEEe-cCCCCCeEEEEECCCCCEEEEEeC
Confidence 6642 23367889999999999999999999999999999543 2 35555 789999999999999999999999
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA 244 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 244 (379)
|+.|++||. .++.+..+..|...|++++|+|++++|++++.|+.|++||... +.+..+.
T Consensus 406 d~~v~~~~~-------------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~ 464 (577)
T 2ymu_A 406 DKTVKLWNR-------------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLT 464 (577)
T ss_dssp TSEEEEECT-------------------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEE
T ss_pred CCEEEEEeC-------------------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEc
Confidence 999999984 4677888899999999999999999999999999999999643 3557888
Q ss_pred eecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccccc
Q 016982 245 FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAV 323 (379)
Q Consensus 245 ~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (379)
.|..+|.+++|+|++++|+ ++.|+.+++|+.+.. ...
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~----~~~-------------------------------------- 502 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQ-------------------------------------- 502 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC----EEE--------------------------------------
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC----EEE--------------------------------------
Confidence 8999999999999999988 567889999985431 111
Q ss_pred ccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 324 ESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 324 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
.+.+|...|++++ |++++ ++|||++.||.|++||. +++.++.
T Consensus 503 -----~~~~h~~~v~~l~-~s~dg----~~l~s~~~dg~v~lwd~-~~~~~~~ 544 (577)
T 2ymu_A 503 -----TLTGHSSSVRGVA-FSPDG----QTIASASDDKTVKLWNR-NGQLLQT 544 (577)
T ss_dssp -----EEECCSSCEEEEE-ECTTS----SCEEEEETTSEEEEECT-TSCEEEE
T ss_pred -----EEeCCCCCEEEEE-EcCCC----CEEEEEECcCEEEEEeC-CCCEEEE
Confidence 1257999999999 77766 89999999999999996 5555543
No 26
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-44 Score=319.17 Aligned_cols=298 Identities=15% Similarity=0.124 Sum_probs=225.1
Q ss_pred eeccCcceeEEEeCC-CCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEec
Q 016982 6 VHQFAQCITCHAWSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~ 83 (379)
...|...|+|++|+| ++++||+|+.||.|+|||+.+++......+.+|.+.|++|+|+| ++++|++++.|++|++||+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 356788999999999 56799999999999999998775566677889999999999998 6789999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc-EEEEe
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV-FLATT 162 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~~ 162 (379)
+++..........+...+.+++|+|++++|++|+.||.|++||++... ...+ ..|...|.+++|+|++. +|+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~----~~~~-~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE----LWNL-RMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB----CCCS-BCCSSCEEEEEECTTCSSEEEEE
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce----eEEE-ecccceEEeeeecCCCceEEEEe
Confidence 877543333222344567899999999999999999999999987654 3344 68999999999999875 78899
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeee
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 242 (379)
+.|+.|++||+... .....+.....|...|++++|+|+|++|++++.|+.|++||+.++... ..
T Consensus 270 s~d~~v~iwd~~~~---------------~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~-~~ 333 (435)
T 4e54_B 270 SVDQTVKIWDLRQV---------------RGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP-LG 333 (435)
T ss_dssp ETTSBCCEEETTTC---------------CSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE-EE
T ss_pred cCcceeeEEecccc---------------cccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc-eE
Confidence 99999999997210 011122233568889999999999999999999999999999887644 33
Q ss_pred eeeecC------CeeeEEEecCCcEEEEEe--CC-----------CeEEEEecCCCcEEEEEEecccccCCCCCccCCCc
Q 016982 243 VAFRDL------PLRDVLFVSEKMVIGVGF--DC-----------NPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQF 303 (379)
Q Consensus 243 ~~~~~~------~i~~~~~s~~~~~l~~~~--d~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
+..|.. .+....|+|++.+++++. ++ .+++|+.........
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~-------------------- 393 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ-------------------- 393 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE--------------------
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE--------------------
Confidence 333321 244567888877766432 22 355555433221110
Q ss_pred ccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccc
Q 016982 304 SEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDL 374 (379)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~ 374 (379)
...+|...|.++..|++++ ++||+|+ |+.|+||++++++..
T Consensus 394 -------------------------l~~~~~~~v~s~~~fspdg----~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 394 -------------------------LYDPESSGISSLNEFNPMG----DTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp -------------------------ECCSSCCCCCCEEEECTTS----SCEEEEC-SSEEEECCCC-----
T ss_pred -------------------------EeCCCCCcEEEEEEECCCC----CEEEEEc-CCcEEEEECCcCeee
Confidence 1246888999986688776 8999876 889999999988654
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.2e-44 Score=301.95 Aligned_cols=269 Identities=17% Similarity=0.282 Sum_probs=220.2
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcC--CCCEEEEEeCCCeEEEEe
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV--RSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vw~ 82 (379)
.+.+|.+.|++++|+|+|++||+|+.|+.|+|||+.+++...+..+.+|..+|.+++|+| ++++|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 457899999999999999999999999999999998875456788999999999999986 488999999999999999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC-----
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN----- 155 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----- 155 (379)
+++++......+..|...|.+++|+|+ +.+|++++.|+.|++||++....+.....+ ..|...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-NAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-TSSSSCBCCCEECCCCCC--
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-ccccCCcceEEEccccCCcc
Confidence 998754445555779999999999997 789999999999999999876533223333 678899999999997
Q ss_pred ------------CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCC----CEE
Q 016982 156 ------------NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSG----NTL 219 (379)
Q Consensus 156 ------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l 219 (379)
+++|++++.|+.|++||+.. ....+++..+.+|...|.+++|+|++ ++|
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~---------------~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE---------------DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECT---------------TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCC---------------CCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence 46899999999999999720 00124567788999999999999986 889
Q ss_pred EEEcCCCeEEEEECCCC---CceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecc
Q 016982 220 AYVGHNSMIYFVDDVGP---SPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDE 289 (379)
Q Consensus 220 ~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~ 289 (379)
++++.|++|++||+... ......+..|...|.+++|+|++++|+ ++.|+.+++|+....+.|.....+..
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred EEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 99999999999998763 112234566788999999999999887 67899999999987777887765544
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.7e-43 Score=305.34 Aligned_cols=294 Identities=13% Similarity=0.147 Sum_probs=229.3
Q ss_pred ceeccCcceeEEEeCCCC-cEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEe
Q 016982 5 AVHQFAQCITCHAWSPDH-AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~ 82 (379)
.+.+|...|++++|+|++ ++|++|+.||.|++||+.+++......+.+|...|.+++|+| ++++|++++.|+.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 456899999999999999 999999999999999999875555555557999999999999 679999999999999999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc-EEEE
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV-FLAT 161 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~~ 161 (379)
+.+...........+...|.+++|+|++++|++++.|+.|++||++ +. ....+ ..|...|.+++|+|+++ +|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~---~~~~~-~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH---EIFKE-KLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC---EEEEE-ECSSSCEEEEEECSSCTTEEEE
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC---EEEEe-ccCCCcEEEEEECCCCCCEEEE
Confidence 9975433222222345789999999999999999999999999984 33 34555 78999999999999998 9999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCcee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSP-SGNTLAYVGHNSMIYFVDDVGPSPLA 240 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~ 240 (379)
++.|+.|++||+... .....++..+ .|...|.+++|+| ++++|++++.|+.|++||+++....
T Consensus 223 ~~~d~~i~iwd~~~~--------------~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~- 286 (383)
T 3ei3_B 223 SSVDATVKLWDLRNI--------------KDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP- 286 (383)
T ss_dssp EETTSEEEEEEGGGC--------------CSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC-
T ss_pred EeCCCEEEEEeCCCC--------------CcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc-
Confidence 999999999997210 0114455555 6889999999999 9999999999999999999887643
Q ss_pred eeeeeec-------C----------CeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCc
Q 016982 241 QNVAFRD-------L----------PLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQF 303 (379)
Q Consensus 241 ~~~~~~~-------~----------~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
..+..|. . .+..++|+|++++ +++.|+.+++|+...........
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~------------------ 347 (383)
T 3ei3_B 287 DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLR------------------ 347 (383)
T ss_dssp SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEEC------------------
T ss_pred cccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeec------------------
Confidence 3443332 2 2333555555555 55578999999987654222110
Q ss_pred ccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 304 SEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
...|...+.+++ |++++ ++|++|+ ||.|++||+++
T Consensus 348 --------------------------~~~~~~~~~~~~-~s~~g----~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 348 --------------------------DPNAAGIISLNK-FSPTG----DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp --------------------------BTTBCSCCCEEE-ECTTS----SEEEEEE-TTEEEEEECC-
T ss_pred --------------------------CCCCCceEEEEE-EecCc----cEEEEec-CCcEEEEecCC
Confidence 012566677778 77666 8999997 99999999975
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-42 Score=296.28 Aligned_cols=286 Identities=11% Similarity=0.094 Sum_probs=241.7
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCc-eEEEEEe--ccCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK-WEKLHVL--QKHDQIVSGIDWSVRSNRIVTVSHDRNSYVW 81 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 81 (379)
...+|...|++++|+|++++|++++ ||.|++|++.+++ ......+ ..|...|.+++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3467999999999999999999998 9999999998652 1122233 3788999999999999999999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
|+.+++.........|...+.+++|+|+++++++++.|+.|++||+++.+ ....+ ..|...+.+++|+|++++|++
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~---~~~~~-~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQF-QGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc---eeeee-ecccCceEEEEECCCCCEEEE
Confidence 99988755555557788999999999999999999999999999998876 45555 779999999999999999999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQ 241 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~ 241 (379)
++.|+.|++||+ +.++.+..+. +...+.+++|+|++++|++++.++.|++||+.+... .
T Consensus 201 ~~~dg~i~~~d~------------------~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~--~ 259 (337)
T 1gxr_A 201 GGLDNTVRSWDL------------------REGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK--Y 259 (337)
T ss_dssp EETTSEEEEEET------------------TTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE--E
T ss_pred EecCCcEEEEEC------------------CCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe--E
Confidence 999999999997 5556665554 567899999999999999999999999999988653 4
Q ss_pred eeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcc
Q 016982 242 NVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGN 320 (379)
Q Consensus 242 ~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
.+..|..++.+++|+|++++|+ ++.|+.+++|+.........
T Consensus 260 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~------------------------------------- 302 (337)
T 1gxr_A 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ------------------------------------- 302 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-------------------------------------
T ss_pred EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-------------------------------------
Confidence 5667889999999999999887 56788999999776542211
Q ss_pred cccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeC
Q 016982 321 DAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDL 368 (379)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~ 368 (379)
..|...|++++ +++++ ++|++++.||.|++|++
T Consensus 303 ----------~~~~~~v~~~~-~s~~~----~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 303 ----------SKESSSVLSCD-ISVDD----KYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ----------EECSSCEEEEE-ECTTS----CEEEEEETTSCEEEEEE
T ss_pred ----------ecCCCcEEEEE-ECCCC----CEEEEecCCCeEEEEEE
Confidence 24778899999 77665 89999999999999997
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-43 Score=296.55 Aligned_cols=244 Identities=14% Similarity=0.186 Sum_probs=222.6
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|.+++|+|++.++++++.|+.|++||+.++ +.+..+..|...+.+++|+|++++|++++.|+.|++|++.
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG--KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 46789999999999999999999999999999999987 6788888899999999999999999999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
+++....+ ..+...+.+++|+|++++|++++.|+.|++||+++++ ....+ .+|..+|.+++|+|++++|++++.
T Consensus 153 ~~~~~~~~--~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---~~~~~-~~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 153 SGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---LLHTL-EGHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp TCSEEEEE--ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEE-CCCSSCCCEEEECTTSCEEEEECT
T ss_pred CCceeEEe--cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---EEEEE-cccCCceeEEEEcCCCCEEEEEcC
Confidence 98855444 5678899999999999999999999999999998876 45556 789999999999999999999999
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA 244 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 244 (379)
|+.|++||+ +.++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+.++. ++..+.
T Consensus 227 dg~i~iwd~------------------~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~ 287 (321)
T 3ow8_A 227 DGYIKIYDV------------------QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT-CVHTFF 287 (321)
T ss_dssp TSCEEEEET------------------TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEEC
T ss_pred CCeEEEEEC------------------CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE-EEEEEc
Confidence 999999997 5677888899999999999999999999999999999999998876 457788
Q ss_pred eecCCeeeEEEecCCcEEE-EEeCCCeEEEEe
Q 016982 245 FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAA 275 (379)
Q Consensus 245 ~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~ 275 (379)
.|...|.+++|+|++++|+ ++.|+.+++|+.
T Consensus 288 ~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 288 DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 8999999999999998777 678889999985
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=293.72 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=206.2
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCce--EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKW--EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+|...|++++|+|++ .|++|+.||.|+|||+.+++. .....+.+|...|++++|+|++++|++++.|++|++||+.
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 4567889999999985 678899999999999988742 2334566899999999999999999999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEEEEeecCCceeEEEEE-eecCCcCEEEEEEcCC-CcEEEE
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLI-RKRHDSSVTSVAWHPN-NVFLAT 161 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~-~~~l~~ 161 (379)
+++.+..+ .+|...|.+++|+|++. +|++++.|+.|++||+++++. ...+ ...+...+.+++|+|+ +++|++
T Consensus 158 ~~~~~~~~--~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 158 QQVVLSSY--RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP---ASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp TTEEEEEE--CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC---EEECC----CCCEEEEEECSSCTTEEEE
T ss_pred CCcEEEEE--cCcCCceEEEEecCCCCCceeeeccccccccccccccce---eeeeecceeeccceeeeecCCCCcceEE
Confidence 99866554 78999999999999874 789999999999999998874 2222 1355667999999995 578999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCcee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSG-NTLAYVGHNSMIYFVDDVGPSPLA 240 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~i~v~d~~~~~~~~ 240 (379)
|+.|+.|++||+ ++++++..+.+|...|++++|+|++ ++|++++.|++|++||+.+++ +
T Consensus 233 g~~dg~v~~wd~------------------~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~-~- 292 (344)
T 4gqb_B 233 GDENGTVSLVDT------------------KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE-L- 292 (344)
T ss_dssp EETTSEEEEEES------------------CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-E-
T ss_pred eccCCcEEEEEC------------------CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-E-
Confidence 999999999997 6788889999999999999999997 579999999999999998765 3
Q ss_pred eeeeeecCCeeeEEEecCCc-EEE-EEeCCCeEEEEecCC
Q 016982 241 QNVAFRDLPLRDVLFVSEKM-VIG-VGFDCNPMVFAADET 278 (379)
Q Consensus 241 ~~~~~~~~~i~~~~~s~~~~-~l~-~~~d~~~~i~~~~~~ 278 (379)
..+.+|...|++++|+|+++ +|+ ++.|+.|++|.....
T Consensus 293 ~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 293 FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 45678999999999999886 565 678999999987653
No 32
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-42 Score=304.12 Aligned_cols=244 Identities=15% Similarity=0.237 Sum_probs=222.8
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|.+.|++++|+|++++|++|+.|+.|++||+.+. +.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~ 222 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 222 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 46789999999999999999999999999999999886 6888999999999999999999999999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC---------
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN--------- 155 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--------- 155 (379)
++.+...+ ..|...|.++.|+|++++|++++.|+.|++||+.+.. ....+ ..|...|.+++|+|+
T Consensus 223 ~~~~~~~~--~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 223 TGYCVKTF--TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE---CKAEL-REHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp TCCEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEE-CCCSSCEEEEEECCSCGGGGGGGC
T ss_pred CCcEEEEE--eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---eeeEe-cCCCceEEEEEEcCcccccchhhh
Confidence 99866555 6799999999999999999999999999999998876 45555 789999999999996
Q ss_pred -----------CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcC
Q 016982 156 -----------NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGH 224 (379)
Q Consensus 156 -----------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 224 (379)
+.+|++|+.|+.|++||+ .++.++..+.+|...|.+++|+|+|++|++++.
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~------------------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDV------------------STGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEET------------------TTTEEEEEEECCSSCEEEEEECSSSSCEEEEET
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEEC------------------CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC
Confidence 668999999999999997 678889999999999999999999999999999
Q ss_pred CCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEe
Q 016982 225 NSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAA 275 (379)
Q Consensus 225 d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~ 275 (379)
|+.|++||+.+++ ++..+..|...|++++|+|++.+|+ ++.|+.+++|+.
T Consensus 359 D~~i~vwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 359 DKTLRVWDYKNKR-CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TTEEEEECCTTSC-CCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCeEEEEECCCCc-eEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999998766 4578889999999999999998777 678999999964
No 33
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-41 Score=286.79 Aligned_cols=289 Identities=10% Similarity=0.053 Sum_probs=243.4
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
..+.+|.+.|++++| |++++|++|+.||.|++||+.++ +....+..|...|.+++|+|++++|++++.|+.+++|++
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS--EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 357889999999999 99999999999999999999887 677788889999999999999999999999999999998
Q ss_pred cCCce-eeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC-CCcEEEE
Q 016982 84 EGSEW-VPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP-NNVFLAT 161 (379)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~ 161 (379)
..... ........|...|.+++| +++++++++.|+.|++|| ... ....+ ..|...+.+++|.| +++++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~---~~~~~-~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS---LVYNL-QAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE---EEEEE-ECCSSCEEEEEEEETTTTEEEE
T ss_pred eecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc---EEEec-ccCCCceeEEEEccCCCCEEEE
Confidence 76521 123334678999999999 578999999999999999 332 34445 78999999999998 8899999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec-CCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCcee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~ 240 (379)
++.|+.|++||. .+....+.. |...+.+++|+|++. +++++.|+.|++||+++++ .+
T Consensus 161 ~~~d~~i~i~d~--------------------~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-~~ 218 (313)
T 3odt_A 161 ASADKTIKLWQN--------------------DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-VL 218 (313)
T ss_dssp EETTSCEEEEET--------------------TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC-EE
T ss_pred EECCCCEEEEec--------------------CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh-hh
Confidence 999999999985 455566665 788999999999998 8899999999999998876 45
Q ss_pred eeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcc
Q 016982 241 QNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGN 320 (379)
Q Consensus 241 ~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
..+..|..+|.+++|+|++.+++++.|+.+++|+........
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~-------------------------------------- 260 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQ-------------------------------------- 260 (313)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEE--------------------------------------
T ss_pred hhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeE--------------------------------------
Confidence 778889999999999999988889999999999976653222
Q ss_pred cccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccccC
Q 016982 321 DAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
.+..|...|++++ +++++ + +++++.||.|++||+++++.+...
T Consensus 261 --------~~~~~~~~i~~~~-~~~~~----~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 261 --------VITLPAISIWSVD-CMSNG----D-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp --------EEECSSSCEEEEE-ECTTS----C-EEEEETTSCEEEEESCGGGCCC--
T ss_pred --------EEeccCceEEEEE-EccCC----C-EEEEeCCCcEEEEeCCCCceeehh
Confidence 1146888999999 77665 5 678999999999999987766543
No 34
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.4e-43 Score=304.59 Aligned_cols=318 Identities=12% Similarity=0.058 Sum_probs=244.3
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCc----eEEEEEeccCCCceEEEEEcCC----C---CEEEEEe
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK----WEKLHVLQKHDQIVSGIDWSVR----S---NRIVTVS 73 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~----~---~~l~~~~ 73 (379)
.+.+|.++|++++|+| ++|++|+.||.|++|++.+++ ......+.+|...|.+++|+|+ + ++|++++
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 4678999999999998 899999999999999999873 2257778899999999999999 9 9999999
Q ss_pred CCCeEEEEeccCCce-----eeeEEeecC-----CCceeEEEEC----CCCCE-EEEEeCCCeEEEEEeec------CCc
Q 016982 74 HDRNSYVWNQEGSEW-----VPTLVILRL-----NRAALCVQWS----PKENK-FAVGSGAKTVCICYYEQ------ENN 132 (379)
Q Consensus 74 ~d~~i~vw~~~~~~~-----~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~v~i~~~~~------~~~ 132 (379)
.|+.|++|++.+++. ...+ ..| ...|.+++|+ |++++ |++++.|+.|++||+.. ...
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKL--DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEE--CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred CCCCEEEEEccCCcccccccceee--cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 999999999988764 3333 556 4899999999 99999 99999999999999998 442
Q ss_pred ee--EEEEEe------ecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec--
Q 016982 133 WW--VSKLIR------KRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-- 202 (379)
Q Consensus 133 ~~--~~~~~~------~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (379)
.. ....+. ..|...+.+++|+|++ +|++++.|+.|++||+ +.++.+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~------------------~~~~~~~~~~~~~ 227 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL------------------STLRPLYNFESQH 227 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEET------------------TTTEEEEEEECCC
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEEC------------------CCCceeEEEeccc
Confidence 11 000221 3478899999999999 9999999999999997 56778888888
Q ss_pred -C---CcceEEEEECCCCCEEEEEcCC---CeEEEEECCCCCceeeeeee-------------ecCCeeeEEEecCCcEE
Q 016982 203 -S---FSWAFGVKWSPSGNTLAYVGHN---SMIYFVDDVGPSPLAQNVAF-------------RDLPLRDVLFVSEKMVI 262 (379)
Q Consensus 203 -~---~~~v~~~~~sp~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l 262 (379)
| ...|.+++|+|++++|++++.| +.|++||+.+++ .+..+.. |...|.+++|+|++++|
T Consensus 228 ~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 228 SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp ---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-EEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred cccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc-ccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 8 8999999999999999999999 999999998876 4467777 89999999999999988
Q ss_pred E-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeee
Q 016982 263 G-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIV 341 (379)
Q Consensus 263 ~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 341 (379)
+ ++.|+.+++|+......... +........ .. .+ ...+ .......|...|++++
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~-~~------~~-------~~~g--------~~~~~~~~~~~v~~~~ 361 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITT---LNMHCDDIE-IE------ED-------ILAV--------DEHGDSLAEPGVFDVK 361 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEE---EECCGGGCS-SG------GG-------CCCB--------CTTSCBCSSCCEEEEE
T ss_pred EEEeCCCeEEEEEcCCCceeEE---EecccCccc-ch------hh-------hhcc--------ccccccccCCceeEEE
Confidence 8 56788999999876532222 210000000 00 00 0000 0001245699999999
Q ss_pred eecccC------CcccceEEEeecCceEEEEeCCCcc
Q 016982 342 PLREAG------SSRITRFTTSGLDGKIVTWDLESQE 372 (379)
Q Consensus 342 ~~~~~~------~~~~~~l~t~~~Dg~v~iW~~~~~~ 372 (379)
|++++ ..++++|++++.||.|++|++.+++
T Consensus 362 -~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 362 -FLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp -EECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred -eccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 66553 0111699999999999999998764
No 35
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=295.74 Aligned_cols=310 Identities=12% Similarity=0.091 Sum_probs=232.0
Q ss_pred eeccCcceeEEEeCCCCcEE-EEEec---CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC---CCEEEEEeCCCeE
Q 016982 6 VHQFAQCITCHAWSPDHAMV-AFCPN---NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR---SNRIVTVSHDRNS 78 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l-~~~~~---dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i 78 (379)
+.+|...|++++|+|++..+ ++|+. ||.|++||+.+++......+ +|...|.+++|+|+ +++|++++.|+.|
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 45689999999999999655 56655 89999999998754443333 68899999999998 6999999999999
Q ss_pred EEEeccCCc-eeeeEEeecCCCceeEEE------ECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCC----cCE
Q 016982 79 YVWNQEGSE-WVPTLVILRLNRAALCVQ------WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHD----SSV 147 (379)
Q Consensus 79 ~vw~~~~~~-~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~----~~v 147 (379)
++||+.+++ ....+ ..|...|.++. |+|++++|++++.|+.|++||++.... ....+ ..|. ..+
T Consensus 93 ~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~-~~~~~~~~~~v 167 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSV--KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD--PVANM-EPVQGENKRDC 167 (357)
T ss_dssp EEECTTSCSSCSEEE--CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--CSEEE-CCCTTSCCCCE
T ss_pred EEEeCCCCCccEEEE--EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--cceec-cccCCCCCCce
Confidence 999999876 44433 67999999995 578999999999999999999987652 12333 3333 388
Q ss_pred EEEE----EcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECC---CCCEEE
Q 016982 148 TSVA----WHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSP---SGNTLA 220 (379)
Q Consensus 148 ~~~~----~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~ 220 (379)
.+++ |+|++++|++++.|+.|++||+ +.++.. ....|...|.+++|+| ++.+|+
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~------------------~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDNGDIKLFDL------------------RNMALR-WETNIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETTSEEEEEET------------------TTTEEE-EEEECSSCEEEEEESCSSSSCCEEE
T ss_pred EEEEEEeccCCCCCEEEEEccCCeEEEEEC------------------ccCcee-eecCCCCceEEEEcCCCCCCCCEEE
Confidence 8998 7889999999999999999997 444443 3456788899999999 999999
Q ss_pred EEcCCCeEEEEECCCCCceeee-----eeeecCCeeeEEEecCCc-EEE-EEeCCCeEEEEecCCCcEEEEEEecccccC
Q 016982 221 YVGHNSMIYFVDDVGPSPLAQN-----VAFRDLPLRDVLFVSEKM-VIG-VGFDCNPMVFAADETGIWTFIKFLDERKTS 293 (379)
Q Consensus 221 ~~~~d~~i~v~d~~~~~~~~~~-----~~~~~~~i~~~~~s~~~~-~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~ 293 (379)
+++.||.|++||+++.... .. +..|...|.+++|+|+++ +++ ++.|+.+++|+.......... +
T Consensus 229 ~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~----- 299 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPT-KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK---D----- 299 (357)
T ss_dssp EEESTTEEEEEEEEEEETT-TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C---C-----
T ss_pred EECCCCeEEEEeCcCCCcc-cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc---c-----
Confidence 9999999999998775432 22 237889999999999988 565 677899999997654311100 0
Q ss_pred CCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEE-EeecCceEEEEeCCCcc
Q 016982 294 SSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFT-TSGLDGKIVTWDLESQE 372 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~-t~~~Dg~v~iW~~~~~~ 372 (379)
..+.. .......... ..+.+|...|++++ |++++ ++|+ |++.||.|++||+.+.+
T Consensus 300 ~~g~~--~~~~~~~~~~-----------------~~~~~~~~~v~~~~-~s~~~----~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 300 SEGIE--MGVAGSVSLL-----------------QNVTLSTQPISSLD-WSPDK----RGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp TTSCC--CCCCCEEEEE-----------------EEEECCSSCEEEEE-ECSSS----TTEEEEEETTSEEEEEEECC--
T ss_pred CCCCc--ccccccccee-----------------eccccCCCCeeEEE-EcCCC----CeEEEEecCCCcEEEEECCCcc
Confidence 00000 0000000111 13468999999999 77666 7787 89999999999998866
Q ss_pred c
Q 016982 373 D 373 (379)
Q Consensus 373 ~ 373 (379)
.
T Consensus 356 ~ 356 (357)
T 3i2n_A 356 K 356 (357)
T ss_dssp -
T ss_pred c
Confidence 4
No 36
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-43 Score=311.60 Aligned_cols=336 Identities=15% Similarity=0.091 Sum_probs=233.5
Q ss_pred eeccCcceeEEEeCCCC---------cEEEEE-------------------ecCCeEEEEEecCCceE--EEEEeccCCC
Q 016982 6 VHQFAQCITCHAWSPDH---------AMVAFC-------------------PNNNEVHIYKLIQEKWE--KLHVLQKHDQ 55 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~---------~~l~~~-------------------~~dg~i~i~~~~~~~~~--~~~~~~~~~~ 55 (379)
...+.+.|.+|+|+|++ ++||+| +.|+.|+||++.+++.. ....+.+|.+
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~ 208 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG 208 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC
Confidence 34467899999999976 677764 46789999999876422 2345677888
Q ss_pred ceEEEEEcCC------CCEEEEEeCCCeEEEEeccCCcee---------eeEEeecCCCceeEEEECCCCCEEEEEeCCC
Q 016982 56 IVSGIDWSVR------SNRIVTVSHDRNSYVWNQEGSEWV---------PTLVILRLNRAALCVQWSPKENKFAVGSGAK 120 (379)
Q Consensus 56 ~v~~~~~~~~------~~~l~~~~~d~~i~vw~~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 120 (379)
.|.+++|+|+ +.+|++++.|++|++||+..+... +...+..|...|++++|+++ ..|++|+.||
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCC
Confidence 9999999997 579999999999999999876421 12344678899999999986 4899999999
Q ss_pred eEEEEEeecCCceeEEEEEeecCCcCEEEE--EEcCCC-cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceE
Q 016982 121 TVCICYYEQENNWWVSKLIRKRHDSSVTSV--AWHPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI 197 (379)
Q Consensus 121 ~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
+|++||++++.. ....+ ..|...|.++ +|+|++ ++|++++.|++|+|||+ +.++++
T Consensus 288 tV~lWD~~~~~~--~~~~~-~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~------------------~~~~~~ 346 (524)
T 2j04_B 288 FVAEFDLTDPEV--PSFYD-QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP------------------KDIATT 346 (524)
T ss_dssp EEEEEETTBCSS--CSEEE-ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECG------------------GGHHHH
T ss_pred EEEEEECCCCCC--ceEEe-ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEEC------------------CCCCcc
Confidence 999999987642 22334 7899999999 578887 89999999999999997 445555
Q ss_pred EEeecCC--cceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEE
Q 016982 198 LQLDLSF--SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFA 274 (379)
Q Consensus 198 ~~~~~~~--~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~ 274 (379)
..+.+|. ..|.+++|+|+++.+++++.|++|++||++++.. ...+.+|...|++++|+|+|++|+ ++.|+.+++|+
T Consensus 347 ~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA-VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC-CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc-ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 5555554 2478999999999999999999999999998764 366778999999999999998877 67899999998
Q ss_pred ecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcc--cccccccccccccccceeeeeeecccCCcccc
Q 016982 275 ADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGN--DAVESSRTRGGTHVNCINCIVPLREAGSSRIT 352 (379)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 352 (379)
.... .+....... ............+++....+...+ ..... .........+.+|...|++|+ |+|++ +.+.
T Consensus 426 ~~~~-~~~~~~~~~--~~~~~~~v~~v~~sp~g~~~~~~~-~~~~~~~~~~g~~~~~l~gh~~~V~~Va-fsp~~-~~~~ 499 (524)
T 2j04_B 426 AARR-LLHGIKNSS--ATQKSLRLWKWDYSIKDDKYRIDS-SYEVYPLTVNDVSKAKIDAHGINITCTK-WNETS-AGGK 499 (524)
T ss_dssp SCSS-TTTCC--------CCCCEEEECBCCSSSCEEEECC-CCCCCC-------------CCCSCCCEE-ECCST-TTTT
T ss_pred chHh-hccccccCc--cceeeeEEEEeccCCCCCeEEccC-CceecccccCCcceeeecCCCceEEEEE-CCCCC-CccH
Confidence 6432 111000000 000000000111222111111000 00000 000122335689999999999 88776 3356
Q ss_pred eEEEeecCceEEEEeCCC
Q 016982 353 RFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 353 ~l~t~~~Dg~v~iW~~~~ 370 (379)
.+|+|+.||.||||++.-
T Consensus 500 ~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 500 CYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp EEEEECTTSEEEEEECSC
T ss_pred HHHhhccCceEEEEEccc
Confidence 999999999999999864
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-43 Score=307.25 Aligned_cols=298 Identities=13% Similarity=0.181 Sum_probs=241.7
Q ss_pred eccCcceeEEEeCCCCc-EEEEE----------ecCCeEEEEEecCCceE-EEEEeccCCCceEEEEEcCCCCEEEEEeC
Q 016982 7 HQFAQCITCHAWSPDHA-MVAFC----------PNNNEVHIYKLIQEKWE-KLHVLQKHDQIVSGIDWSVRSNRIVTVSH 74 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~-~l~~~----------~~dg~i~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 74 (379)
..+...|.+++|+|+++ +|++| +.|+.|++|++.++... .+..+ .|...|.+++|+|++++|++++.
T Consensus 9 l~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 9 LAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp -CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEES
T ss_pred HhhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEcc
Confidence 44567899999999987 99999 88999999999876321 23333 58889999999999999999999
Q ss_pred CCeEEEEeccCC--ceeeeEEeecCCCceeEEEECCC-CCEEEEEeCCCeEEEEEeecCC------ceeEEEEEeecCCc
Q 016982 75 DRNSYVWNQEGS--EWVPTLVILRLNRAALCVQWSPK-ENKFAVGSGAKTVCICYYEQEN------NWWVSKLIRKRHDS 145 (379)
Q Consensus 75 d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~~~~~~ 145 (379)
|+.|++||+.+. .......+..|...|.+++|+|+ +++|++++.|+.|++||+.... ........ ..|..
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~ 166 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-MSSVD 166 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-CCSSC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc-cCCCC
Confidence 999999999872 11123344679999999999998 8999999999999999998765 21111122 57889
Q ss_pred CEEEEEEcCC-CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC------CcceEEEEECCCC-C
Q 016982 146 SVTSVAWHPN-NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS------FSWAFGVKWSPSG-N 217 (379)
Q Consensus 146 ~v~~~~~~p~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~-~ 217 (379)
.|.+++|+|+ +.+|++++.|+.|++||+ ..++.+..+..+ ...+.+++|+|++ .
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDL------------------KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST 228 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEET------------------TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEEC------------------CCCCcceEEeccccccccCCceEEEEECCCCCC
Confidence 9999999999 789999999999999997 566777777665 7889999999997 6
Q ss_pred EEEEEcCCC---eEEEEECCCCCceeeeee-eecCCeeeEEEec-CCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccc
Q 016982 218 TLAYVGHNS---MIYFVDDVGPSPLAQNVA-FRDLPLRDVLFVS-EKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERK 291 (379)
Q Consensus 218 ~l~~~~~d~---~i~v~d~~~~~~~~~~~~-~~~~~i~~~~~s~-~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~ 291 (379)
+|++++.|+ .|++||+++.......+. .|...|.+++|+| ++++|+ ++.|+.+++|+........
T Consensus 229 ~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~--------- 299 (416)
T 2pm9_A 229 RVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS--------- 299 (416)
T ss_dssp EEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE---------
T ss_pred EEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce---------
Confidence 899999998 999999998755567777 8999999999999 888777 6678999999876543211
Q ss_pred cCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 292 TSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
.+.+|...|++++ |++++ ..+|++++.||.|++|++.+.
T Consensus 300 -------------------------------------~~~~~~~~v~~~~-~s~~~---~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 300 -------------------------------------QFPARGNWCFKTK-FAPEA---PDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp -------------------------------------EEECSSSCCCCEE-ECTTC---TTEEEECCSSSEEEEEESCCC
T ss_pred -------------------------------------eecCCCCceEEEE-ECCCC---CCEEEEEecCCcEEEEEccCC
Confidence 1246889999999 66554 179999999999999999876
Q ss_pred ccc
Q 016982 372 EDL 374 (379)
Q Consensus 372 ~~~ 374 (379)
+..
T Consensus 339 ~~~ 341 (416)
T 2pm9_A 339 TNT 341 (416)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 38
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.1e-42 Score=296.83 Aligned_cols=309 Identities=11% Similarity=0.073 Sum_probs=234.3
Q ss_pred eccCcceeEEEeCCC----CcEEEEEecCCeEEEEEecCCce-EEEEEec--cCCCceEEEEEcCC----CCEEEEEeCC
Q 016982 7 HQFAQCITCHAWSPD----HAMVAFCPNNNEVHIYKLIQEKW-EKLHVLQ--KHDQIVSGIDWSVR----SNRIVTVSHD 75 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~----~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~~--~~~~~v~~~~~~~~----~~~l~~~~~d 75 (379)
.+|.++|++++|+|+ ...+++++.++.|++|++.+++. ..+.... .|...|.+++|+|+ +++|++++.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 479999999999984 45566666778999999986531 2222222 26678999999999 6699999999
Q ss_pred CeEEEEeccCCceeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEe--ecCCcCEEEEEE
Q 016982 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIR--KRHDSSVTSVAW 152 (379)
Q Consensus 76 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~--~~~~~~v~~~~~ 152 (379)
+.|++||+.+++....+ ..|...|.+++|+| ++++|++++.||.|++||++.++. ...+. ..|...|.+++|
T Consensus 95 g~i~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 95 GIIRIINPITMQCIKHY--VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL---VAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp CEEEEECTTTCCEEEEE--ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE---EEEECSTTSCSSCEEEEEE
T ss_pred CEEEEEEchhceEeeee--cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE---EEEecccccccCceeEEEE
Confidence 99999999998865554 57999999999999 999999999999999999988762 33321 478999999999
Q ss_pred cCCCcEEEEeeCCCeEEEEeccccccccc--------cccC--CCccCCcccceEEEeecCCcceEEEEECCCCCEEEEE
Q 016982 153 HPNNVFLATTSTDGKCRVFSTFIKGVDIK--------EKKE--GTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYV 222 (379)
Q Consensus 153 ~p~~~~l~~~~~d~~i~v~d~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 222 (379)
+|++++|++++.|+.|++||+........ .... .................|...|.+++|+ +++|+++
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 99999999999999999999853211100 0000 0000000111233445588999999999 7799999
Q ss_pred cCCCeEEEEECCCCCc-------------eeeeeeeecCCeeeEEEecC--CcEEE-EEeCCCeEEEEecCCCcEE-EEE
Q 016982 223 GHNSMIYFVDDVGPSP-------------LAQNVAFRDLPLRDVLFVSE--KMVIG-VGFDCNPMVFAADETGIWT-FIK 285 (379)
Q Consensus 223 ~~d~~i~v~d~~~~~~-------------~~~~~~~~~~~i~~~~~s~~--~~~l~-~~~d~~~~i~~~~~~~~~~-~~~ 285 (379)
+.|+.|++||+.+... .+..+..|...|.+++|+|+ +++|+ ++.|+.+++|+........ ...
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 327 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT 327 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence 9999999999877543 34666778889999999999 99888 5678899999977543111 110
Q ss_pred EecccccCCCCCccCCCcccccceeeccccccCccccccccccccccc--ccceeeeeeecccCCcccceEEEeecCceE
Q 016982 286 FLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTH--VNCINCIVPLREAGSSRITRFTTSGLDGKI 363 (379)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v 363 (379)
.+.+| ...|++++ |++++ ++|++++.||.|
T Consensus 328 -------------------------------------------~~~~~~~~~~v~~~~-~s~~~----~~l~s~~~dg~i 359 (366)
T 3k26_A 328 -------------------------------------------TLTHHKCGAAIRQTS-FSRDS----SILIAVCDDASI 359 (366)
T ss_dssp -------------------------------------------EECCTTCCSCEEEEE-ECTTS----SEEEEEETTSEE
T ss_pred -------------------------------------------EEcccccCCceEEEE-eCCCC----CeEEEEeCCCEE
Confidence 11345 78999999 77665 899999999999
Q ss_pred EEEeCCC
Q 016982 364 VTWDLES 370 (379)
Q Consensus 364 ~iW~~~~ 370 (379)
++||+.+
T Consensus 360 ~iwd~~~ 366 (366)
T 3k26_A 360 WRWDRLR 366 (366)
T ss_dssp EEEEC--
T ss_pred EEEEecC
Confidence 9999863
No 39
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-41 Score=298.39 Aligned_cols=289 Identities=12% Similarity=0.175 Sum_probs=235.5
Q ss_pred eeccCcceeEEEeCCCCc-EEEEEecCCeEEEEEe----cCCce----EEEEEecc----------CCCceEEEEEcCCC
Q 016982 6 VHQFAQCITCHAWSPDHA-MVAFCPNNNEVHIYKL----IQEKW----EKLHVLQK----------HDQIVSGIDWSVRS 66 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~----~~~~~----~~~~~~~~----------~~~~v~~~~~~~~~ 66 (379)
.+.|.++|++++|+|+++ +||+|+.||.|++|++ .+++. .....+.. |...|.+++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 355679999999999999 9999999999999999 76631 03344443 67799999999999
Q ss_pred CEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcC
Q 016982 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSS 146 (379)
Q Consensus 67 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~ 146 (379)
++|++++.|+.|++|| .+++.... +..|...|.+++|+|++++|++++.|+.|++||+.++. ....+ ..+...
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~-~~~~~~ 193 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNV--LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT---VMQHF-ELKETG 193 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE---EEEEE-CCC---
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeee--ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc---EEEEe-eccccC
Confidence 9999999999999999 44554443 36789999999999999999999999999999998776 34444 445444
Q ss_pred ---------------EEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEE
Q 016982 147 ---------------VTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVK 211 (379)
Q Consensus 147 ---------------v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 211 (379)
+.+++|+|++ .+++++.++.|++||+ ..++.+..+..|...|.+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~------------------~~~~~~~~~~~~~~~i~~~~ 254 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQI------------------TEKTPTGKLIGHHGPISVLE 254 (425)
T ss_dssp ------------CCCBSCCEEEETT-EEEEECGGGCEEEEET------------------TCSSCSEEECCCSSCEEEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEc------------------CCCceeeeeccCCCceEEEE
Confidence 8899999875 5888899999999997 55677778888999999999
Q ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccc
Q 016982 212 WSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERK 291 (379)
Q Consensus 212 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~ 291 (379)
|+|++++|++++.|+.|++||+.+... ...+..|...|.+++|+|++.+++++.|+.+++|+..... ...
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~------ 324 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGNS-QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNT---LLA------ 324 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBSC-SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTE---EEE------
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCcc-ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCc---EeE------
Confidence 999999999999999999999988664 4677778999999999999955557889999999976542 111
Q ss_pred cCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 292 TSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
.+.+|...|.+++ +++++ ++|++++.||.|++||+.++
T Consensus 325 -------------------------------------~~~~~~~~i~~~~-~s~~~----~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 325 -------------------------------------LSIVDGVPIFAGR-ISQDG----QKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp -------------------------------------EEECTTCCEEEEE-ECTTS----SEEEEEETTSCEEEEECHHH
T ss_pred -------------------------------------ecccCCccEEEEE-EcCCC----CEEEEEECCCeEEEEECCCC
Confidence 1146888999999 77665 89999999999999999887
Q ss_pred c
Q 016982 372 E 372 (379)
Q Consensus 372 ~ 372 (379)
+
T Consensus 363 ~ 363 (425)
T 1r5m_A 363 N 363 (425)
T ss_dssp H
T ss_pred c
Confidence 6
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-40 Score=290.75 Aligned_cols=284 Identities=14% Similarity=0.214 Sum_probs=229.7
Q ss_pred eeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEecc-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeee
Q 016982 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPT 91 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~ 91 (379)
+.+++|++ ..+++++.|+.|++|++.+++ ....+.. |...|.+++|+|++++|++++.||.|++||+.+++....
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~--~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGS--VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCC--EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCc--EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE
Confidence 44566665 557778899999999999884 3344433 788999999999999999999999999999999886555
Q ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEE
Q 016982 92 LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171 (379)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~ 171 (379)
+ ..|...|.+++| +++.+++++.|+.|++||++.... ....+ ..|...|.+++|+|++++|++++.|+.|++|
T Consensus 172 ~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw 244 (401)
T 4aez_A 172 M--AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH--QIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIW 244 (401)
T ss_dssp E--CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred e--cCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc--eeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEc
Confidence 4 679999999999 467999999999999999985442 34455 7899999999999999999999999999999
Q ss_pred eccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCC-EEEEEc--CCCeEEEEECCCCCceeeeeeeecC
Q 016982 172 STFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGN-TLAYVG--HNSMIYFVDDVGPSPLAQNVAFRDL 248 (379)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 248 (379)
|+ ..++++..+..|...|.+++|+|++. ++++++ .|+.|++||+.++.. ...+. +..
T Consensus 245 d~------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~-~~~~~-~~~ 304 (401)
T 4aez_A 245 DA------------------RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR-VNTVD-AGS 304 (401)
T ss_dssp ET------------------TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE-EEEEE-CSS
T ss_pred cC------------------CCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE-EEEEe-CCC
Confidence 97 56778888888999999999999765 555554 799999999988764 35554 677
Q ss_pred CeeeEEEecCCcEEEEE---eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccccccc
Q 016982 249 PLRDVLFVSEKMVIGVG---FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVES 325 (379)
Q Consensus 249 ~i~~~~~s~~~~~l~~~---~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (379)
.+.+++|+|++++++++ .|+.+.+|+..........
T Consensus 305 ~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~----------------------------------------- 343 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV----------------------------------------- 343 (401)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE-----------------------------------------
T ss_pred cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE-----------------------------------------
Confidence 89999999999988853 5899999997654311111
Q ss_pred ccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 326 SRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 326 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
.+.+|...|++++ +++++ ++|++++.||.|++|++.+++.++.
T Consensus 344 ---~~~~h~~~v~~~~-~s~dg----~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 344 ---DIPAHDTRVLYSA-LSPDG----RILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp ---EEECCSSCCCEEE-ECTTS----SEEEEECTTSEEEEEECCC------
T ss_pred ---EecCCCCCEEEEE-ECCCC----CEEEEEeCCCcEEEEECCCCccccc
Confidence 1247999999999 77665 8999999999999999999877654
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-42 Score=304.42 Aligned_cols=325 Identities=11% Similarity=0.125 Sum_probs=246.7
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCC--ceEEEEEeccCCCceEEEEEcCC-CCEEEEEeCCCeEEEEe
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE--KWEKLHVLQKHDQIVSGIDWSVR-SNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~ 82 (379)
...|...|++++|+|++++|++|+.||.|++|++.+. ..+....+.+|...|.+++|+|+ +++|++++.|+.|++||
T Consensus 63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 3568899999999999999999999999999999871 12578888999999999999998 89999999999999999
Q ss_pred ccCCc------eeee-EEeecCCCceeEEEECCC-CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecC------CcCEE
Q 016982 83 QEGSE------WVPT-LVILRLNRAALCVQWSPK-ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH------DSSVT 148 (379)
Q Consensus 83 ~~~~~------~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~------~~~v~ 148 (379)
+.+++ .... .....|...|.+++|+|+ +.+|++++.|+.|++||++... ....+ ..+ ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~-~~~~~~~~~~~~v~ 218 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK---EVIHL-SYTSPNSGIKQQLS 218 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE---EEEEE-CCCCCSSCCCCCEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC---cceEE-eccccccccCCceE
Confidence 98875 2211 122468889999999998 7899999999999999998876 34444 333 78899
Q ss_pred EEEEcCCC-cEEEEeeCCC---eEEEEeccccccccccccCCCccCCcccceEEEee-cCCcceEEEEECC-CCCEEEEE
Q 016982 149 SVAWHPNN-VFLATTSTDG---KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-LSFSWAFGVKWSP-SGNTLAYV 222 (379)
Q Consensus 149 ~~~~~p~~-~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~ 222 (379)
+++|+|++ .++++++.|+ .|++||+. ....++..+. .|...|.+++|+| ++++|+++
T Consensus 219 ~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~-----------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 219 VVEWHPKNSTRVATATGSDNDPSILIWDLR-----------------NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp EEEECSSCTTEEEEEECCSSSCCCCEEETT-----------------STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred EEEECCCCCCEEEEEECCCCCceEEEEeCC-----------------CCCCCcEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 99999997 6899999998 99999972 2224556666 8899999999999 99999999
Q ss_pred cCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCC-cEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccC
Q 016982 223 GHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEK-MVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300 (379)
Q Consensus 223 ~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
+.|+.|++||+.+++ .+..+..|...|.+++|+|++ .+|+ ++.|+.+++|+......-......... .
T Consensus 282 ~~dg~v~~wd~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~---~------ 351 (416)
T 2pm9_A 282 GRDNTVLLWNPESAE-QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETK---Q------ 351 (416)
T ss_dssp ESSSEEEEECSSSCC-EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------
T ss_pred eCCCCEEEeeCCCCc-cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCccccccccc---c------
Confidence 999999999998876 457788899999999999998 6777 567889999998754311100000000 0
Q ss_pred CCcccccceeecccc---ccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 301 SQFSEAFGKLYGQSK---YGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 301 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
. .....+..... .+... ..-.. .....|...+++++ |++++ ++|++++.||.|+||++.+.
T Consensus 352 -~--~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~s~dg----~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 352 -Q--ESETDFWNNVSREESKEKP-SVFHL-QAPTWYGEPSPAAH-WAFGG----KLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp ------------------CCSCC-CSSCC-CCCSTTCCCSCCCE-EETTT----EEECBCTTSSCBCCBCCCCC
T ss_pred -c--CCccccccccccccccccc-ccccc-cCCccccCCccceE-EeeCC----eEEEEeCCCCeEEEEEeccC
Confidence 0 00000000000 00000 00001 23345788898999 88776 99999999999999999874
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.2e-42 Score=295.73 Aligned_cols=294 Identities=11% Similarity=0.024 Sum_probs=217.9
Q ss_pred Ccccceec----cCcceeEEEeCCCCcEEEEEecC-------CeEEEEEecCCc------e--EEEEEeccCCCceEEEE
Q 016982 1 MAAIAVHQ----FAQCITCHAWSPDHAMVAFCPNN-------NEVHIYKLIQEK------W--EKLHVLQKHDQIVSGID 61 (379)
Q Consensus 1 m~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d-------g~i~i~~~~~~~------~--~~~~~~~~~~~~v~~~~ 61 (379)
|+.|++.. ..-||++++|+||+++|++|+.+ +.|++|++.... . .....+.+|...|.+++
T Consensus 1 m~~m~~~~~~~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~ 80 (365)
T 4h5i_A 1 MASMKFVTASYNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAID 80 (365)
T ss_dssp ---CCCCEEEEECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEE
T ss_pred CCcccceeeecCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEE
Confidence 66655533 25699999999999999998753 369999987542 1 22345778888888887
Q ss_pred EcCCCCEEEEEe-----------CCCeEEEEeccCCceeeeE-E------eecCCCceeEEEECCCCCEEEEEe--CCCe
Q 016982 62 WSVRSNRIVTVS-----------HDRNSYVWNQEGSEWVPTL-V------ILRLNRAALCVQWSPKENKFAVGS--GAKT 121 (379)
Q Consensus 62 ~~~~~~~l~~~~-----------~d~~i~vw~~~~~~~~~~~-~------~~~~~~~v~~~~~~~~~~~l~~~~--~d~~ 121 (379)
++ ++.++++. .|+.+++|++......... . ...+...+.+++|+|||+++++++ .|+.
T Consensus 81 ~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~ 158 (365)
T 4h5i_A 81 AS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAI 158 (365)
T ss_dssp EE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCE
T ss_pred eC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCE
Confidence 65 55666653 4678999998765321111 1 112334588999999999987554 6899
Q ss_pred EEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEE--E
Q 016982 122 VCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL--Q 199 (379)
Q Consensus 122 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 199 (379)
|++||+++.. ....+ .|...|.+++|+|+++++++++.++ +.+|+. .+++.+. .
T Consensus 159 i~iwd~~~~~---~~~~~--~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~------------------~~~~~~~~~~ 214 (365)
T 4h5i_A 159 MRIIDPSDLT---EKFEI--ETRGEVKDLHFSTDGKVVAYITGSS-LEVIST------------------VTGSCIARKT 214 (365)
T ss_dssp EEEEETTTTE---EEEEE--ECSSCCCEEEECTTSSEEEEECSSC-EEEEET------------------TTCCEEEEEC
T ss_pred EEEeECCCCc---EEEEe--CCCCceEEEEEccCCceEEecccee-EEEEEe------------------ccCcceeeee
Confidence 9999998876 33443 5778899999999999999998665 555553 3344433 3
Q ss_pred eecCCcceEEEEECCCCCEEEEEcCCC----eEEEEECCCCCce---eeeeeeecCCeeeEEEecCCcEEE-EEeCCCeE
Q 016982 200 LDLSFSWAFGVKWSPSGNTLAYVGHNS----MIYFVDDVGPSPL---AQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPM 271 (379)
Q Consensus 200 ~~~~~~~v~~~~~sp~~~~l~~~~~d~----~i~v~d~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~ 271 (379)
...|...|.+++|+|+++++++++.|+ .+++|++...... ...+..|..+|++++|+|||++|| ++.|+.|+
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 456788899999999999999998776 6888987765422 234567788999999999999998 66788999
Q ss_pred EEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCccc
Q 016982 272 VFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRI 351 (379)
Q Consensus 272 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 351 (379)
+|+..... .... .+.+|...|++|+ |+|++
T Consensus 295 iwd~~~~~---~~~~------------------------------------------~~~gH~~~V~~v~-fSpdg---- 324 (365)
T 4h5i_A 295 LVKLKDLS---MSKI------------------------------------------FKQAHSFAITEVT-ISPDS---- 324 (365)
T ss_dssp EEETTTTE---EEEE------------------------------------------ETTSSSSCEEEEE-ECTTS----
T ss_pred EEECCCCc---EEEE------------------------------------------ecCcccCCEEEEE-ECCCC----
Confidence 99976542 1110 2368999999999 88776
Q ss_pred ceEEEeecCceEEEEeCCC
Q 016982 352 TRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 352 ~~l~t~~~Dg~v~iW~~~~ 370 (379)
++|||||.|++||||++..
T Consensus 325 ~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEETTSEEEEEECCT
T ss_pred CEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999964
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.8e-41 Score=285.16 Aligned_cols=292 Identities=13% Similarity=0.102 Sum_probs=241.0
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
.-+.++|.+++|+|||++++++..++.+.+|..... .......+|...|.+++|+|++++|++++ |+.|++||+.++
T Consensus 6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH--ARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE--EEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTST
T ss_pred cccCCceeEEEECCCCCEEEeecCCCcEeccccCCc--cccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCC
Confidence 345789999999999999999887777777655443 33334447999999999999999999998 999999999876
Q ss_pred ceeee---EEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 87 EWVPT---LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 87 ~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
+.... +....|...|.+++|+|++++|++++.|+.|++||++..... ....+ ..|...+.+++|+|++++|++++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~-~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-IKAEL-TSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-EEEEE-ECSSSCEEEEEECTTSSEEEEEE
T ss_pred CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-eeeec-ccCCCceEEEEECCCCCEEEEEe
Confidence 53222 222368899999999999999999999999999999887531 22333 67889999999999999999999
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 243 (379)
.|+.|++||+ ..++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++.. ..+
T Consensus 161 ~dg~v~~~d~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~ 221 (337)
T 1gxr_A 161 SDGNIAVWDL------------------HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL-QQH 221 (337)
T ss_dssp TTSCEEEEET------------------TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EEE
T ss_pred CCCcEEEEeC------------------CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE-eee
Confidence 9999999997 667788888889999999999999999999999999999999887643 444
Q ss_pred eeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccc
Q 016982 244 AFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDA 322 (379)
Q Consensus 244 ~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (379)
.+...+.+++|+|++++++ ++.++.+++|+........
T Consensus 222 -~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~---------------------------------------- 260 (337)
T 1gxr_A 222 -DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ---------------------------------------- 260 (337)
T ss_dssp -ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE----------------------------------------
T ss_pred -cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE----------------------------------------
Confidence 4678899999999999888 5568899999877644211
Q ss_pred cccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccc
Q 016982 323 VESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLL 375 (379)
Q Consensus 323 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~ 375 (379)
+.+|...|.+++ +++++ ++|++++.||.|++||+.+++.+.
T Consensus 261 -------~~~~~~~v~~~~-~~~~~----~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 261 -------LHLHESCVLSLK-FAYCG----KWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp -------ECCCSSCEEEEE-ECTTS----SEEEEEETTSEEEEEETTTCCEEE
T ss_pred -------EcCCccceeEEE-ECCCC----CEEEEecCCCcEEEEECCCCeEEE
Confidence 146888999999 77665 899999999999999999877653
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-41 Score=296.80 Aligned_cols=300 Identities=13% Similarity=0.172 Sum_probs=240.2
Q ss_pred cCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCce
Q 016982 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW 88 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~ 88 (379)
|.+.|++++|+|++++|++++.||.|++|+.. + +.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-G--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-S--CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-C--CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 68899999999999999999999999999943 3 57788899999999999999999999999999999999999886
Q ss_pred eeeEEeecCCCc---------------eeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEc
Q 016982 89 VPTLVILRLNRA---------------ALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWH 153 (379)
Q Consensus 89 ~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 153 (379)
...+ ..+... +.+++|+|++ .+++++.++.|++||+..... ...+ ..|...|.+++|+
T Consensus 184 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~---~~~~-~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 184 MQHF--ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTP---TGKL-IGHHGPISVLEFN 256 (425)
T ss_dssp EEEE--CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSC---SEEE-CCCSSCEEEEEEE
T ss_pred EEEe--eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCce---eeee-ccCCCceEEEEEC
Confidence 5554 334444 8999999875 588889999999999988763 4445 6899999999999
Q ss_pred CCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEEC
Q 016982 154 PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDD 233 (379)
Q Consensus 154 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~ 233 (379)
|++++|++++.|+.|++||+ ..++.+..+..|...|.+++|+|++ ++++++.|+.|++||+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~------------------~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHG------------------GNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSL 317 (425)
T ss_dssp TTTTEEEEEETTSCEEEECS------------------SSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEET
T ss_pred CCCCEEEEEcCCCEEEEEEC------------------CCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEEC
Confidence 99999999999999999997 5667778888899999999999999 9999999999999999
Q ss_pred CCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeec
Q 016982 234 VGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYG 312 (379)
Q Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (379)
.++. .+..+..|..++.+++|+|++++|+ ++.|+.+++|+......-. ..+...... .
T Consensus 318 ~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~--~~~~~~~~~--------~---------- 376 (425)
T 1r5m_A 318 KQNT-LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKS--RSLYGNRDG--------I---------- 376 (425)
T ss_dssp TTTE-EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------------------------
T ss_pred CCCc-EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccce--eeeeccccc--------c----------
Confidence 8876 4577777889999999999999888 5668899999976432100 000000000 0
Q ss_pred cccccCccccccccccccccccc--ceeeeeeecccCCcccceEEEeecCceEEEEeCC
Q 016982 313 QSKYGVGNDAVESSRTRGGTHVN--CINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
......+....+.+|.. .|++++ |++++ ++|++++.||.|++|+++
T Consensus 377 ------~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~----~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 377 ------LNPLPIPLYASYQSSQDNDYIFDLS-WNCAG----NKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp --------CEECCEEEEECCTTCCCCEEEEE-ECTTS----SEEEEEESSSCCEEEECC
T ss_pred ------cCcccchhhhhhcCcccCCceEEEE-ccCCC----ceEEEEecCceEEEEeec
Confidence 00000011124467866 999999 77666 899999999999999985
No 45
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=282.67 Aligned_cols=268 Identities=19% Similarity=0.263 Sum_probs=215.0
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
.+|...|++++|+|++++||+|+.|+.|++|+...+..+.+..+.+|...|.+++|+|++++|++++.|++|++||+.++
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 57999999999999999999999999999999988766788899999999999999999999999999999999999876
Q ss_pred cee-eeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC
Q 016982 87 EWV-PTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165 (379)
Q Consensus 87 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 165 (379)
... ....+..|...|.+++|+|++++|++++.|+.|++||.+.... .....+ .+|...|.+++|+|++++|++++.|
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~-~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW-VCCATL-EGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE-EEEEEE-CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE-EEEEEe-cCCCCceEEEEECCCCCEEEEEeCC
Confidence 422 2333467889999999999999999999999999999987642 123444 7899999999999999999999999
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEeec-CCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc------
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP------ 238 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~------ 238 (379)
+.|++||......... ...........++..+.+ |...|.+++|+|++..|++++.|+.|++|+......
T Consensus 216 ~~v~iW~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~ 292 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQG---VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF 292 (345)
T ss_dssp SCEEEEEEECTTCTTC---CCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE
T ss_pred CeEEEeccccCCCCcc---ceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE
Confidence 9999998632111000 000001123345556654 788999999999999999999999999999765421
Q ss_pred --eeeeeeeecCCeeeEEEecCCc-EEE-EEeCCCeEEEEecCCC
Q 016982 239 --LAQNVAFRDLPLRDVLFVSEKM-VIG-VGFDCNPMVFAADETG 279 (379)
Q Consensus 239 --~~~~~~~~~~~i~~~~~s~~~~-~l~-~~~d~~~~i~~~~~~~ 279 (379)
......+|...|++++|+|++. +|+ ++.|+.+++|+.....
T Consensus 293 ~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 293 SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 1122346888999999999874 776 6789999999987643
No 46
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-40 Score=282.17 Aligned_cols=260 Identities=13% Similarity=0.164 Sum_probs=221.0
Q ss_pred EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 45 EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
....++.+|...|.+++|+|++++|++++.|++|++||+.+++....+ ..|...|.+++|+|++++|++++.|+.+++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAI--PLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--ECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEe--ecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 567789999999999999999999999999999999999998865554 568899999999999999999999999999
Q ss_pred EEeecCCc-eeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 125 CYYEQENN-WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 125 ~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
|++..... ......+ .+|...|.++.|++++. +++++.|+.|++||+ .+++++..+.+|
T Consensus 124 w~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~------------------~~~~~~~~~~~h 183 (340)
T 1got_B 124 YNLKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDI------------------ETGQQTTTFTGH 183 (340)
T ss_dssp EETTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE-EEEEETTSCEEEEET------------------TTTEEEEEECCC
T ss_pred EECccCCCcceeEEEe-cCCCccEEEEEECCCCc-EEEEECCCcEEEEEC------------------CCCcEEEEEcCC
Confidence 99977542 1234445 78999999999998875 889999999999997 677888899999
Q ss_pred CcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEE
Q 016982 204 FSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWT 282 (379)
Q Consensus 204 ~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~ 282 (379)
...|.+++|+|++++|++++.|+.|++||++++. ....+.+|...|.+++|+|++++|+ ++.|+.+++|+........
T Consensus 184 ~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 9999999999999999999999999999998876 4578888999999999999999887 6678899999976543111
Q ss_pred EEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCce
Q 016982 283 FIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGK 362 (379)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~ 362 (379)
. + ....+...|++++ |++++ ++|++|+.||.
T Consensus 263 ~---~-----------------------------------------~~~~~~~~v~~~~-~s~~g----~~l~~g~~d~~ 293 (340)
T 1got_B 263 T---Y-----------------------------------------SHDNIICGITSVS-FSKSG----RLLLAGYDDFN 293 (340)
T ss_dssp E---E-----------------------------------------CCTTCCSCEEEEE-ECTTS----SEEEEEETTSE
T ss_pred E---E-----------------------------------------ccCCcccceEEEE-ECCCC----CEEEEECCCCe
Confidence 1 0 0023445799999 77666 89999999999
Q ss_pred EEEEeCCCcccccc
Q 016982 363 IVTWDLESQEDLLN 376 (379)
Q Consensus 363 v~iW~~~~~~~~~~ 376 (379)
|++||+.+++.+..
T Consensus 294 i~vwd~~~~~~~~~ 307 (340)
T 1got_B 294 CNVWDALKADRAGV 307 (340)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEEcccCcEeeE
Confidence 99999988766543
No 47
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-40 Score=329.40 Aligned_cols=357 Identities=15% Similarity=0.158 Sum_probs=262.8
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|.+.|++++|+|+|++||+|+.||.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 45689999999999999999999999999999999987 6788899999999999999999999999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSP--KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 162 (379)
+++....+ ..|...|.+++|+| ++.++++++.|+.|++||++++. ....+ .+|...|.+++|+|++++|+++
T Consensus 688 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~-~~h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 688 TGKLVHTY--DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTM-FGHTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp TCCEEEEE--ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEE-CCCSSCEEEEEECSSTTEEEEE
T ss_pred CCceEEEE--cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhhee-cCCCCCEEEEEEecCCCEEEEE
Confidence 99866655 67999999999999 55689999999999999999887 45556 7899999999999999999999
Q ss_pred eCCCeEEEEeccccccccccc--------------------cCCCcc----------------CCcccceEEEe-ecCCc
Q 016982 163 STDGKCRVFSTFIKGVDIKEK--------------------KEGTSS----------------DTKFGEQILQL-DLSFS 205 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~--------------------~~~~~~----------------~~~~~~~~~~~-~~~~~ 205 (379)
+.||.|++||+.......... ...+.. +..++..+..+ .+|..
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 841 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS 841 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence 999999999985321110000 000000 01122333333 36788
Q ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCC---c-
Q 016982 206 WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETG---I- 280 (379)
Q Consensus 206 ~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~---~- 280 (379)
.+.+++|+|+++++++++.|+.|++||+.++. ....+.+|...|.+++|+|+|++++ ++.|+.+++|+..... .
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~ 920 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRL-KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAI 920 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSS
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeee
Confidence 99999999999999999999999999998876 4577888999999999999998777 6788999999864210 0
Q ss_pred -------------------------EEEEEEecccc-cCCCCCccCCCcccccceeeccccccCcc--c-cccccccccc
Q 016982 281 -------------------------WTFIKFLDERK-TSSSGPKYGSQFSEAFGKLYGQSKYGVGN--D-AVESSRTRGG 331 (379)
Q Consensus 281 -------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ 331 (379)
........... ...........+++....+......+... + ........+.
T Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~ 1000 (1249)
T 3sfz_A 921 VLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV 1000 (1249)
T ss_dssp SEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC
T ss_pred cccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc
Confidence 00000000000 00000000111111111111111111100 0 0112223457
Q ss_pred ccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccc
Q 016982 332 THVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLL 375 (379)
Q Consensus 332 ~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~ 375 (379)
+|...|++++ |++++ ++|++++.||.|++||+.+++.+.
T Consensus 1001 ~h~~~v~~l~-~s~dg----~~l~s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 1001 GHKKAVRHIQ-FTADG----KTLISSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp CCSSCCCCEE-ECSSS----SCEEEECSSSBEEEEETTTTEEEC
T ss_pred cCCCceEEEE-ECCCC----CEEEEEcCCCEEEEEECCCCceEE
Confidence 8999999999 77666 899999999999999999876653
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.2e-42 Score=302.43 Aligned_cols=283 Identities=12% Similarity=0.037 Sum_probs=228.6
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..+++++|+|++++|++++.|+.|++||+.+. +....+..| ..+....|+|++++|++++.|+.|++||+.+++...
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIR--DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE 133 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSE--ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEeccc--ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee
Confidence 34568999999999999999999999999875 344444555 445556789999999999999999999999887543
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEE
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRV 170 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v 170 (379)
. ...|...|.+++|+|++++|++++.|+.|++||+++.+. ...+ .+|...|.+++|+|++++|++++.|+.|++
T Consensus 134 ~--~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 134 I--DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN---PRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp E--TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC---CEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred e--cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC---ceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 3 357999999999999999999999999999999988763 4555 789999999999999999999999999999
Q ss_pred EeccccccccccccCCCccCCcccceEEEeec------------------------CCcceEEEEECCCCCEEEEEcCCC
Q 016982 171 FSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL------------------------SFSWAFGVKWSPSGNTLAYVGHNS 226 (379)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~v~~~~~sp~~~~l~~~~~d~ 226 (379)
||+ ++++.+..+.. +...+.+++|+|++++|++++.||
T Consensus 208 wd~------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 269 (420)
T 3vl1_A 208 WEC------------------GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG 269 (420)
T ss_dssp EET------------------TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS
T ss_pred eEC------------------CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC
Confidence 997 44555555543 234556667789999999999999
Q ss_pred eEEEEECCCCCceeeeeeeecCCeeeEEEecCCc-EEE-EEeCCCeEEEEecCCCc-EEEEEEecccccCCCCCccCCCc
Q 016982 227 MIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKM-VIG-VGFDCNPMVFAADETGI-WTFIKFLDERKTSSSGPKYGSQF 303 (379)
Q Consensus 227 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~-~~~d~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
.|++||++++.........|...|.+++|+|+++ +|+ ++.|+.+++|+...... ...
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~-------------------- 329 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGE-------------------- 329 (420)
T ss_dssp CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE--------------------
T ss_pred eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhh--------------------
Confidence 9999999988766555556788999999999998 666 66788999999765431 111
Q ss_pred ccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 304 SEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
+ ...|...|+++. ++ ++ ++|++++.||.|++|++.+.
T Consensus 330 ------~-------------------~~~~~~~v~~~~-~~-~~----~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 330 ------F-------------------LINEGTPINNVY-FA-AG----ALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp ------E-------------------EESTTSCEEEEE-EE-TT----EEEEEETTTEEEEEEEECCT
T ss_pred ------h-------------------hccCCCCceEEE-eC-CC----CEEEEecCCccEEEEeccCC
Confidence 1 023677788886 54 33 79999999999999998763
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-41 Score=297.79 Aligned_cols=324 Identities=13% Similarity=0.071 Sum_probs=229.4
Q ss_pred eccCcceeEEEeCC-CCcEEEEEecCCeEEEEEecC---Cc-eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q 016982 7 HQFAQCITCHAWSP-DHAMVAFCPNNNEVHIYKLIQ---EK-WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVW 81 (379)
Q Consensus 7 ~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~---~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 81 (379)
.+|.+.|++++|+| ++++||+|+.||.|++||+.+ +. ......+ .|...|.+++|+|++++|++++.|+.|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 67899999999999 999999999999999999976 32 1122233 489999999999999999999999999999
Q ss_pred ecc---CCceeeeE--------Eeec--CCCceeEEE--ECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeec--CC
Q 016982 82 NQE---GSEWVPTL--------VILR--LNRAALCVQ--WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR--HD 144 (379)
Q Consensus 82 ~~~---~~~~~~~~--------~~~~--~~~~v~~~~--~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--~~ 144 (379)
|+. +++..... .... +...+.++. +++++++|++++.|+.|++||+++.. ....+ .. |.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~-~~~~h~ 214 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE---RLQII-ENSPRH 214 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC---EEEEE-ECCGGG
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe---eeEEE-ccCCCC
Confidence 995 44332222 1112 455666766 66889999999999999999998877 45555 44 88
Q ss_pred cCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-cCCcceEEEEEC----CCCCEE
Q 016982 145 SSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-LSFSWAFGVKWS----PSGNTL 219 (379)
Q Consensus 145 ~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s----p~~~~l 219 (379)
..|.+++|+|++++|++++.||.|++||+ +.++++..+. .|...|.+++|+ |++.+|
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l 276 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTTRGIIDIWDI------------------RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIV 276 (437)
T ss_dssp CCEEEEEECTTSCEEEEEETTSCEEEEET------------------TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEEc------------------CCccEEEEEecCCCCceEEEEeccccCCCccEE
Confidence 99999999999999999999999999997 5677888775 677899999655 468899
Q ss_pred EEEcCCCeEEEEECCCCCceeeeeee--------------------------ecCCeeeEEEecCCcEEE-EEeCCCeEE
Q 016982 220 AYVGHNSMIYFVDDVGPSPLAQNVAF--------------------------RDLPLRDVLFVSEKMVIG-VGFDCNPMV 272 (379)
Q Consensus 220 ~~~~~d~~i~v~d~~~~~~~~~~~~~--------------------------~~~~i~~~~~s~~~~~l~-~~~d~~~~i 272 (379)
++++.|+.|++||+.++.. ...+.. |...|++++|+ ++++|+ ++.|+.+++
T Consensus 277 ~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~ 354 (437)
T 3gre_A 277 VGGSSKTFLTIWNFVKGHC-QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVM 354 (437)
T ss_dssp EEESTTEEEEEEETTTTEE-EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEE
T ss_pred EEEcCCCcEEEEEcCCCcE-EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEE
Confidence 9999999999999987653 233332 55668889999 667666 667999999
Q ss_pred EEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccc
Q 016982 273 FAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRIT 352 (379)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 352 (379)
|+................ ........+.......... ..............|.+.|++++ +.++. ++.
T Consensus 355 wd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~h~~~I~~i~-~~~~~--~~~ 422 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRF----SDVFIPTQVTANLTMLLRK-----MKRTSTHSVDDSLYHHDIINSIS-TCEVD--ETP 422 (437)
T ss_dssp EETTCGGGCEEEECC--C----CCEEEEEEEETTEEEEEEE-----CC-------------CCCEEEEE-EEESS--SSE
T ss_pred EECCCcccceEEeccccc----CceEEEEEeecceEEEEEe-----cccccccccCcccccccceeeEe-eeccC--Cce
Confidence 998765533332211000 0000000000011110000 00000111123456999999999 44441 237
Q ss_pred eEEEeecCceEEEEe
Q 016982 353 RFTTSGLDGKIVTWD 367 (379)
Q Consensus 353 ~l~t~~~Dg~v~iW~ 367 (379)
+|+||+.||.|+||+
T Consensus 423 ~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 423 LLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEETTSCEEEEC
T ss_pred EEEEEcCCceEEEeC
Confidence 999999999999996
No 50
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.5e-40 Score=277.82 Aligned_cols=260 Identities=18% Similarity=0.216 Sum_probs=218.2
Q ss_pred eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEE
Q 016982 44 WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVC 123 (379)
Q Consensus 44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 123 (379)
......+.+|...|++++|+|++++|++++.|+.|++|++.+++....+ ..|...|.+++|+|++++|++++.|+.|+
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh--ccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 4667788999999999999999999999999999999999988865554 67899999999999999999999999999
Q ss_pred EEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 124 ICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 124 i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
+||++++. ....+ ..|...|.+++|+|++++|++++.|+.|++||+ ++++++..+..|
T Consensus 91 vwd~~~~~---~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~------------------~~~~~~~~~~~~ 148 (312)
T 4ery_A 91 IWDVSSGK---CLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV------------------KTGKCLKTLPAH 148 (312)
T ss_dssp EEETTTCC---EEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEET------------------TTCCEEEEECCC
T ss_pred EEECCCCc---EEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC------------------CCCEEEEEecCC
Confidence 99998877 45556 789999999999999999999999999999997 667888889999
Q ss_pred CcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEE
Q 016982 204 FSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWT 282 (379)
Q Consensus 204 ~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~ 282 (379)
...|.+++|+|++++|++++.|+.|++||+++++........+..++..++|+|++++|+ ++.|+.+++|+......
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-- 226 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-- 226 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE--
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE--
Confidence 999999999999999999999999999999987654333445567899999999999887 66788999999765431
Q ss_pred EEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeee--eeecccCCcccceEEEeecC
Q 016982 283 FIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCI--VPLREAGSSRITRFTTSGLD 360 (379)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~~~~~l~t~~~D 360 (379)
... +.+|...+.++ .+..++ +.+|++|+.|
T Consensus 227 -~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~----~~~l~sg~~d 258 (312)
T 4ery_A 227 -LKT-------------------------------------------YTGHKNEKYCIFANFSVTG----GKWIVSGSED 258 (312)
T ss_dssp -EEE-------------------------------------------ECSSCCSSSCCCEEEECSS----SCEEEECCTT
T ss_pred -EEE-------------------------------------------EEecCCceEEEEEEEEeCC----CcEEEEECCC
Confidence 111 13454443333 223233 3899999999
Q ss_pred ceEEEEeCCCccccccC
Q 016982 361 GKIVTWDLESQEDLLNY 377 (379)
Q Consensus 361 g~v~iW~~~~~~~~~~~ 377 (379)
|.|++||+.+++.++.+
T Consensus 259 g~i~vwd~~~~~~~~~~ 275 (312)
T 4ery_A 259 NLVYIWNLQTKEIVQKL 275 (312)
T ss_dssp SCEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCchhhhhh
Confidence 99999999998776654
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.1e-39 Score=284.91 Aligned_cols=285 Identities=12% Similarity=0.190 Sum_probs=230.1
Q ss_pred eeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeE
Q 016982 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTL 92 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~ 92 (379)
++.|+||++ ++||+|. |++|+|||..+++...+..+.+|...|++++|+|+|++|++|+.|+.|++||+.+++.+..+
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 567999975 5888875 89999999999865555566778889999999999999999999999999999999866554
Q ss_pred EeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEe
Q 016982 93 VILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172 (379)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d 172 (379)
..|...+.+++++ +..+++|+.|+.+++||...... ....+ .+|...+..+.|+|+++++++++.|+.+++|+
T Consensus 186 --~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~--~~~~~-~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 186 --TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH--HVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp --CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC--EEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred --eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce--eeEEe-cccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 6789999988875 67999999999999999877653 34445 78999999999999999999999999999999
Q ss_pred ccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCC-EEEE--EcCCCeEEEEECCCCCceeeeeeeecCC
Q 016982 173 TFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGN-TLAY--VGHNSMIYFVDDVGPSPLAQNVAFRDLP 249 (379)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~--~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 249 (379)
..... .....+.....|...|.+++|+|++. ++++ |+.|+.|++||+.++.. ...+. +...
T Consensus 259 ~~~~~--------------~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~-~~~~~-~~~~ 322 (420)
T 4gga_A 259 SAPGE--------------GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-LSAVD-AHSQ 322 (420)
T ss_dssp SSCCS--------------SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE-EEEEE-CSSC
T ss_pred ecccc--------------ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc-ceeec-cccc
Confidence 72100 11234556677889999999999654 5554 35799999999998764 34544 4567
Q ss_pred eeeEEEecCCcEEEEE---eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccc
Q 016982 250 LRDVLFVSEKMVIGVG---FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESS 326 (379)
Q Consensus 250 i~~~~~s~~~~~l~~~---~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (379)
+.++.|+++++.++++ .|+.+++|+........
T Consensus 323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~-------------------------------------------- 358 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA-------------------------------------------- 358 (420)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE--------------------------------------------
T ss_pred eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE--------------------------------------------
Confidence 8999999998877643 57899999976543211
Q ss_pred cccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccc
Q 016982 327 RTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED 373 (379)
Q Consensus 327 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~ 373 (379)
.+.||.+.|++++ |++++ ++|||||.||+|+|||+.+...
T Consensus 359 --~l~gH~~~V~~l~-~spdg----~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 359 --ELKGHTSRVLSLT-MSPDG----ATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp --EECCCSSCEEEEE-ECTTS----SCEEEEETTTEEEEECCSCSSC
T ss_pred --EEcCCCCCEEEEE-EcCCC----CEEEEEecCCeEEEEECCCCCc
Confidence 2368999999999 77766 8999999999999999976443
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.6e-40 Score=287.71 Aligned_cols=295 Identities=10% Similarity=0.067 Sum_probs=231.8
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..+....|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+|++++|++++.|+.|++||+.+++...
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence 44555678999999999999999999999887 6777888999999999999999999999999999999999988655
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEe--ecCCcCE---------------------
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIR--KRHDSSV--------------------- 147 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~--~~~~~~v--------------------- 147 (379)
.+ ..|...|.+++|+|++++|++++.|+.|++||+++++ ....+. ..+...+
T Consensus 176 ~~--~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 176 TL--IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp EE--ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred EE--cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 54 6799999999999999999999999999999998876 333331 1233444
Q ss_pred EEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCC-EEEEEcCC
Q 016982 148 TSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGN-TLAYVGHN 225 (379)
Q Consensus 148 ~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~-~l~~~~~d 225 (379)
.+++|+|++++|++++.||.|++||+ +.++.+..+ ..|...|.+++|+|++. +|++++.|
T Consensus 251 ~~~~~s~~~~~l~~~~~dg~i~i~d~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 251 NNLEFGTYGKYVIAGHVSGVITVHNV------------------FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp CTTCSSCTTEEEEEEETTSCEEEEET------------------TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred cceEEcCCCCEEEEEcCCCeEEEEEC------------------CCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence 44556789999999999999999997 455555555 45788999999999998 99999999
Q ss_pred CeEEEEECCCCCceeeeeee-ecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCc
Q 016982 226 SMIYFVDDVGPSPLAQNVAF-RDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQF 303 (379)
Q Consensus 226 ~~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
|.|++||++++...+..+.. |...+..+.| +++++|+ ++.|+.+++|+......-......
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~---------------- 375 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEF---------------- 375 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECT----------------
T ss_pred CeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceec----------------
Confidence 99999999987665566666 5677877755 5676666 667889999987652211000000
Q ss_pred ccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 304 SEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
.....+.+|...|.+++ |++++..++ .|+++|.+|.+++|++++
T Consensus 376 ---------------------~~~~~~~~~~~~v~~~~-~s~~~~~~g-~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 376 ---------------------ETPTFLVSNDDAVSQFC-YVSDDESNG-EVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ---------------------TSCEEECCSSCCCCEEE-EECCSSSSC-EEEEEETTTEEEEEESCC
T ss_pred ---------------------cCccEEccCCcceEEEE-EccCCCCcc-eEEEEcCCceEEEEeccC
Confidence 00002357899999999 777761111 677777899999999875
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-39 Score=289.01 Aligned_cols=289 Identities=14% Similarity=0.155 Sum_probs=240.3
Q ss_pred ceeccCcc-eeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 5 AVHQFAQC-ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 5 ~~~~~~~~-i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
.+.+|... ++++.+ ++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|++ +|++++.|++|++||+
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence 56788777 466666 5689999999999999999987 7888999999999999999988 9999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEEC--CCCCEEEEEeCCCeEEEEEeecCCcee--------------------EEEEEee
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWS--PKENKFAVGSGAKTVCICYYEQENNWW--------------------VSKLIRK 141 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~v~i~~~~~~~~~~--------------------~~~~~~~ 141 (379)
.+++....+ ..|...|.+++|+ ++++++++++.|+.|++||++...... ....+ .
T Consensus 191 ~~~~~~~~~--~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 267 (464)
T 3v7d_B 191 KKGCCTHVF--EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL-R 267 (464)
T ss_dssp TTTEEEEEE--CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE-C
T ss_pred CCCcEEEEE--CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc-c
Confidence 999865554 6799999999998 578999999999999999998765321 12233 6
Q ss_pred cCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEE
Q 016982 142 RHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAY 221 (379)
Q Consensus 142 ~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 221 (379)
+|...+.++ +++++++++++.|+.|++||+ .+++++..+.+|...|.+++|+|++++|++
T Consensus 268 ~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 268 GHMASVRTV--SGHGNIVVSGSYDNTLIVWDV------------------AQMKCLYILSGHTDRIYSTIYDHERKRCIS 327 (464)
T ss_dssp CCSSCEEEE--EEETTEEEEEETTSCEEEEET------------------TTTEEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred CccceEEEE--cCCCCEEEEEeCCCeEEEEEC------------------CCCcEEEEecCCCCCEEEEEEcCCCCEEEE
Confidence 788888877 567899999999999999997 678888999999999999999999999999
Q ss_pred EcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCC
Q 016982 222 VGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGS 301 (379)
Q Consensus 222 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
++.|+.|++||+.+++ .+..+..|...|.+++|++ ..+++++.|+.+++|+........ .
T Consensus 328 g~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~--~---------------- 387 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGE-LMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKF--S---------------- 387 (464)
T ss_dssp EETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEE--E----------------
T ss_pred EeCCCcEEEEECCCCc-EEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceee--e----------------
Confidence 9999999999998876 5578888999999999973 344457889999999987543111 0
Q ss_pred CcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
..|...+..++ +++++ ++|++|+ ||.|++||+.+++.++.
T Consensus 388 -----------------------------~~~~~~~~~~~-~~~~~----~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 388 -----------------------------YHHTNLSAITT-FYVSD----NILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp -----------------------------EECTTCCCEEE-EEECS----SEEEEEE-TTEEEEEETTTCCEEES
T ss_pred -----------------------------ecCCCCccEEE-EEeCC----CEEEEec-CCeEEEEECCCCcEEeh
Confidence 12444555666 66665 8999988 99999999999988765
No 54
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=282.03 Aligned_cols=270 Identities=17% Similarity=0.260 Sum_probs=228.6
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC--CCEEEEEeCCCeEEEE
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR--SNRIVTVSHDRNSYVW 81 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw 81 (379)
..+.+|.+.|++++|+|++++||+|+.||.|++|++.....+....+.+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 45788999999999999999999999999999999986656888899999999999999987 8999999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC-----
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP----- 154 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p----- 154 (379)
|+.+++.........|...|.+++|+|+ +++|++++.|+.|++||++...... ...+ ..|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIII-DAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEE-ECCTTCEEEEEECCCC---
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEe-cCCCCceEEEEEcCccccc
Confidence 9999875555566778999999999999 9999999999999999998875322 2233 68999999999999
Q ss_pred --------CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCC---CCEEEEEc
Q 016982 155 --------NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS---GNTLAYVG 223 (379)
Q Consensus 155 --------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~ 223 (379)
++++|++++.|+.|++||+... .........+..|...|.+++|+|+ +++|++++
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSD--------------AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETT--------------TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCC--------------CcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 6899999999999999997210 0123455677889999999999999 89999999
Q ss_pred CCCeEEEEECCCCCce----eeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecc
Q 016982 224 HNSMIYFVDDVGPSPL----AQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDE 289 (379)
Q Consensus 224 ~d~~i~v~d~~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~ 289 (379)
.||.|++||+...... ......|...|.+++|+|++++|+ ++.|+.+++|+.+..+.|........
T Consensus 229 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEEC-
T ss_pred CCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccccceec
Confidence 9999999999876321 122233778899999999999877 67899999999998887887765544
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.7e-40 Score=280.89 Aligned_cols=306 Identities=15% Similarity=0.160 Sum_probs=218.5
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCC--ceEEEEEeccCCCceEEEEEcC--CCCEEEEEeCCCeEE
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE--KWEKLHVLQKHDQIVSGIDWSV--RSNRIVTVSHDRNSY 79 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~ 79 (379)
..+.+|.+.|++++|+|++++||+|+.||.|++||+.++ ..+....+.+|...|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999999999999999999999999864 2357788889999999999999 589999999999999
Q ss_pred EEeccCCce-------eeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEEEeecCCceeE---EEEE------ee
Q 016982 80 VWNQEGSEW-------VPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCICYYEQENNWWV---SKLI------RK 141 (379)
Q Consensus 80 vw~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~---~~~~------~~ 141 (379)
+||+.+++. ........|...|.+++|+|+ ++++++++.|+.|++||++....... .... ..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 999987632 233444678999999999999 99999999999999999987653111 1111 02
Q ss_pred cCCcCEEEEEEcCC---CcEEEEeeCCCeEEEEeccccccccccccCCCccCCccc--ceEEEeecCCcceEEEEECCCC
Q 016982 142 RHDSSVTSVAWHPN---NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG--EQILQLDLSFSWAFGVKWSPSG 216 (379)
Q Consensus 142 ~~~~~v~~~~~~p~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~ 216 (379)
.|...+.+++|+|+ +.++++++.++.+.+|+. ..+ ..+..+..|...|.+++|+|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRG------------------KDGKLHVAAKLPGHKSLIRSISWAPSI 226 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEEC------------------TTSCEEEEEECCCCCSCEEEEEECCCS
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEcc------------------CCCceeeeeecCCCCcceeEEEECCCC
Confidence 67789999999997 899999999999977764 223 3467788899999999999998
Q ss_pred ----CEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEe-CCC-eEEEEecCCCcEEEEEEeccc
Q 016982 217 ----NTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGF-DCN-PMVFAADETGIWTFIKFLDER 290 (379)
Q Consensus 217 ----~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~-~~i~~~~~~~~~~~~~~~~~~ 290 (379)
++|++++.||.|++||++..... .....+........+++....++.+. ++. ...+...........
T Consensus 227 ~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 299 (351)
T 3f3f_A 227 GRWYQLIATGCKDGRIRIFKITEKLSP-LASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELL------ 299 (351)
T ss_dssp SCSSEEEEEEETTSCEEEEEEEECC----------------------------------------CCSEEEEEE------
T ss_pred CCcceEEEEEcCCCeEEEEeCCCCcCc-cccCCcccceeccCCCcccccccccccccccceeeeecccccccEE------
Confidence 89999999999999998876433 22222222333334444443333221 111 101000000000110
Q ss_pred ccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 291 KTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
..+.+|...|++++ |++++ ++|+||+.||.|++|++.+
T Consensus 300 -------------------------------------~~~~~h~~~v~~~~-~s~~~----~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 300 -------------------------------------SEHDDHNGEVWSVS-WNLTG----TILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp -------------------------------------EEECTTSSCEEEEE-ECSSS----CCEEEEETTSCEEEEEECT
T ss_pred -------------------------------------EEEecccccEEEEE-EcCCC----CEEEEecCCCcEEEEecCc
Confidence 13368999999999 77665 8999999999999999998
Q ss_pred cccccc
Q 016982 371 QEDLLN 376 (379)
Q Consensus 371 ~~~~~~ 376 (379)
++.++.
T Consensus 338 ~~~~~~ 343 (351)
T 3f3f_A 338 SNEFKC 343 (351)
T ss_dssp TSCEEE
T ss_pred Ccchhh
Confidence 765543
No 56
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=287.91 Aligned_cols=319 Identities=11% Similarity=0.107 Sum_probs=230.6
Q ss_pred ccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCc---------eEEEEEeccCC------------CceEEEEEcCCC
Q 016982 8 QFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK---------WEKLHVLQKHD------------QIVSGIDWSVRS 66 (379)
Q Consensus 8 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~---------~~~~~~~~~~~------------~~v~~~~~~~~~ 66 (379)
.+.+.|++++|+|+|++||+|+.||.|+||++.+++ ++....+.+|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999998752 23578889998 889999999998
Q ss_pred --CEEEEEeCCCeEEEEeccCCceee--------------------------------------eEEeecCCCceeEEEE
Q 016982 67 --NRIVTVSHDRNSYVWNQEGSEWVP--------------------------------------TLVILRLNRAALCVQW 106 (379)
Q Consensus 67 --~~l~~~~~d~~i~vw~~~~~~~~~--------------------------------------~~~~~~~~~~v~~~~~ 106 (379)
.+|++++.|+.|++||+.+++... ......|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 799999999999999997654311 0112568899999999
Q ss_pred CCCCCEEEEEeCCCeEEEEEeecCCceeEEEEE------eecCCcCEEEEEEcCCC-cEEEEeeCCCeEEEEeccccccc
Q 016982 107 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLI------RKRHDSSVTSVAWHPNN-VFLATTSTDGKCRVFSTFIKGVD 179 (379)
Q Consensus 107 ~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~p~~-~~l~~~~~d~~i~v~d~~~~~~~ 179 (379)
+|++++|+++ .|+.|++||++.... ....+ ...|...|.+++|+|++ ++|++++.|+.|++||+
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~------ 256 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM------ 256 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET------
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC------
Confidence 9999999998 799999999984331 12211 15789999999999998 99999999999999997
Q ss_pred cccccCCCccCCcccce----EEEeecCCc------------ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee
Q 016982 180 IKEKKEGTSSDTKFGEQ----ILQLDLSFS------------WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~------------~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 243 (379)
+.++. +..+..|.. .|.+++|+|+|++|++++. +.|++||++.....+..+
T Consensus 257 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 257 ------------RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp ------------TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred ------------cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 33333 556666654 8999999999999999988 999999998744455777
Q ss_pred eeecCC---------------eeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCccccc
Q 016982 244 AFRDLP---------------LRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAF 307 (379)
Q Consensus 244 ~~~~~~---------------i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (379)
..|... +..++|+|++++|+ ++.|+.+++|+........+....+.. ... .... .
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~-~~~--~~~~------~ 394 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENN-KPR--TVLK------P 394 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTC-CTT--CBCC------C
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccccc-ccc--cccC------C
Confidence 766532 23499999999887 667899999998876543222111100 000 0000 0
Q ss_pred ceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeC
Q 016982 308 GKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDL 368 (379)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~ 368 (379)
..+....... ..........+...|..++ |+|++ ++||+++.|+ +++|..
T Consensus 395 ~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~-~~p~~----~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 395 RKVCASGKRK-----KDEISVDSLDFNKKILHTA-WHPKE----NIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCEECSSCCC-----TTCEEGGGCCTTSCCCEEE-ECSSS----SEEEEECSSC-EEEEEC
T ss_pred ccccccCCcc-----cccccccccccCCceeEEE-ECCCC----CEEEEEecce-eeeecc
Confidence 0000000000 0000001124567899999 66555 8999999886 777764
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-39 Score=271.36 Aligned_cols=258 Identities=18% Similarity=0.219 Sum_probs=206.7
Q ss_pred EEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEE
Q 016982 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCIC 125 (379)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~ 125 (379)
..+.+|...|.+++|+|+|++|++++.|++|++||+.+........+.+|..+|.+++|+|+ +++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45788999999999999999999999999999999976532233445789999999999874 8999999999999999
Q ss_pred EeecCCceeEEEEEeecCCcCEEEEEEcCC--CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 126 YYEQENNWWVSKLIRKRHDSSVTSVAWHPN--NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
|++.+... ....+ ..|...|.+++|+|+ +.+|++++.|+.|++||+.. ........+..|
T Consensus 83 d~~~~~~~-~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~----------------~~~~~~~~~~~h 144 (297)
T 2pm7_B 83 KEENGRWS-QIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE----------------NGTTSPIIIDAH 144 (297)
T ss_dssp EBSSSCBC-CCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS----------------SSCBCCEEEECC
T ss_pred EcCCCceE-EEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC----------------CCceeeeeeecc
Confidence 99876411 12334 679999999999997 78999999999999999721 001123556789
Q ss_pred CcceEEEEECCC-------------CCEEEEEcCCCeEEEEECCCCCc---eeeeeeeecCCeeeEEEecCC---cEEE-
Q 016982 204 FSWAFGVKWSPS-------------GNTLAYVGHNSMIYFVDDVGPSP---LAQNVAFRDLPLRDVLFVSEK---MVIG- 263 (379)
Q Consensus 204 ~~~v~~~~~sp~-------------~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~i~~~~~s~~~---~~l~- 263 (379)
...|.+++|+|+ +++|++++.|+.|++||+++... +...+.+|...|.+++|+|++ .+|+
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 999999999997 57999999999999999887653 345677899999999999984 6776
Q ss_pred EEeCCCeEEEEecCCC-cEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeee
Q 016982 264 VGFDCNPMVFAADETG-IWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVP 342 (379)
Q Consensus 264 ~~~d~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 342 (379)
++.|+.+++|+.+... .|.... + ...+|...|.+++
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~-~-----------------------------------------~~~~~~~~v~~~~- 261 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTL-L-----------------------------------------KEEKFPDVLWRAS- 261 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEE-S-----------------------------------------SSSCCSSCEEEEE-
T ss_pred EECCCcEEEEEeCCCCCccceee-e-----------------------------------------ecccCCCcEEEEE-
Confidence 6789999999876532 122100 0 0135788999999
Q ss_pred ecccCCcccceEEEeecCceEEEEeCCC
Q 016982 343 LREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 343 ~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
|++++ ++||+++.||.|++|+...
T Consensus 262 ~s~~g----~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 262 WSLSG----NVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp ECSSS----CCEEEEETTSCEEEEEECT
T ss_pred ECCCC----CEEEEEcCCCcEEEEEECC
Confidence 77666 8999999999999999873
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.5e-39 Score=306.88 Aligned_cols=292 Identities=16% Similarity=0.137 Sum_probs=245.9
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
..+.+|.+.|++++|+|++++||+++.||.|++||+.++ +.+..+.+|..+|.+++|+|++++|++++.|+.|++||+
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 356789999999999999999999999999999999887 788889999999999999999999999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC-CCcEEEEe
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP-NNVFLATT 162 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~ 162 (379)
.+++....+ ..|...|.+++|+|++++|++++.||.|++||++.+.. ....+ ..|...|.+++|+| +++.|+++
T Consensus 85 ~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~-~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 85 NTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--LEQTF-EGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp TTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE--EEEEE-ECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce--EEEEE-cCCCCcEEEEEEEcCCCCEEEEE
Confidence 999866555 67899999999999999999999999999999987642 34455 78999999999999 88999999
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC-CcceEEEEECC--CCCEEEEEcCCCeEEEEECCCCCce
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS-FSWAFGVKWSP--SGNTLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp--~~~~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
+.||.|++||+ ..+.....+..+ ...+..++|+| ++.+|++++.||.|++||+.++. .
T Consensus 160 ~~dg~v~vwd~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~ 220 (814)
T 3mkq_A 160 CLDRTVKVWSL------------------GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-C 220 (814)
T ss_dssp ETTSEEEEEET------------------TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-E
T ss_pred eCCCeEEEEEC------------------CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-E
Confidence 99999999997 344445555444 37899999999 99999999999999999998876 4
Q ss_pred eeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccC
Q 016982 240 AQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGV 318 (379)
Q Consensus 240 ~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
...+..|...|.+++|+|++.+++ ++.|+.+++|+........
T Consensus 221 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~------------------------------------ 264 (814)
T 3mkq_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK------------------------------------ 264 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE------------------------------------
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE------------------------------------
Confidence 577888999999999999999887 5568999999876543111
Q ss_pred cccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 319 GNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 319 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
.+..|...|.+++ +++++ ...+++++.|+.+.+|++..+
T Consensus 265 ----------~~~~~~~~v~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 265 ----------TLNVGLERSWCIA-THPTG---RKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp ----------EECCSSSSEEEEE-ECTTC---GGGEEEEEETTEEEEEECSCC
T ss_pred ----------EeecCCCcEEEEE-EccCC---CceEEEEEeCCCEEEEEcCCC
Confidence 1145778899999 66665 133355555777889988654
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=282.14 Aligned_cols=311 Identities=14% Similarity=0.176 Sum_probs=230.8
Q ss_pred ceeccCcceeEEEeCC-CCcEEEEEecCCeEEEEEecCCceEEEEE-----------eccCCCceEEEEEcC-CCCEEEE
Q 016982 5 AVHQFAQCITCHAWSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHV-----------LQKHDQIVSGIDWSV-RSNRIVT 71 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-----------~~~~~~~v~~~~~~~-~~~~l~~ 71 (379)
.+.+|.++|++++|+| ++++|++|+.||.|++||+.++....... ..+|...|.+++|+| ++++|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 3567999999999999 99999999999999999998763211111 135899999999999 7789999
Q ss_pred EeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCC---CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEE
Q 016982 72 VSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK---ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVT 148 (379)
Q Consensus 72 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~ 148 (379)
++.|+.|++||+.+++....+ .+...+.++.|+|. +.++++++.|+.|++||++.+. ....+ ..|...|.
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~-~~~~~~v~ 190 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVF---NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS---CSHIL-QGHRQEIL 190 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC---CCEEE-CCCCSCEE
T ss_pred EeCCCeEEEeeCCCCccceec---cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc---eeeee-cCCCCcEE
Confidence 999999999999998855554 36788999999984 4599999999999999998876 34555 78999999
Q ss_pred EEEEcCCCc-EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCe
Q 016982 149 SVAWHPNNV-FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSM 227 (379)
Q Consensus 149 ~~~~~p~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~ 227 (379)
+++|+|+++ +|++++.||.|++||+............... ............|...|.+++|+|++++|++++.|+.
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNG--KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTT--CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccc--ccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 999999997 6899999999999998421100000000000 0001111222567889999999999999999999999
Q ss_pred EEEEECCCCCceeeeeeee------cCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCC
Q 016982 228 IYFVDDVGPSPLAQNVAFR------DLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGS 301 (379)
Q Consensus 228 i~v~d~~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
|++||+.++... .....+ ......+.....+.+++++.++.+.+|+........
T Consensus 269 i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~------------------- 328 (408)
T 4a11_B 269 MRLWNSSNGENT-LVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT------------------- 328 (408)
T ss_dssp EEEEETTTCCBC-CCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE-------------------
T ss_pred EEEEECCCCccc-eeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee-------------------
Confidence 999999887643 222111 111222233345677788999999999976543221
Q ss_pred CcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
.+.+|...|++++ |++++ ++|+||+.||.|++||+.+++.+..
T Consensus 329 ---------------------------~~~~~~~~v~~~~-~s~~~----~~l~s~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 329 ---------------------------MLKGHYKTVDCCV-FQSNF----QELYSGSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp ---------------------------EECCCSSCEEEEE-EETTT----TEEEEEETTSCEEEEEECC------
T ss_pred ---------------------------eeccCCCeEEEEE-EcCCC----CEEEEECCCCeEEEEeCCCCCccCC
Confidence 2257999999999 77665 8999999999999999998776643
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.5e-39 Score=276.62 Aligned_cols=261 Identities=15% Similarity=0.185 Sum_probs=219.4
Q ss_pred EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 45 EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
.....+.+|...|++++|+|++++|++++.|++|++||..+++....+ ..+...|.+++|+|++..+++++.|+.+++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~--~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAV--TMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEE--ecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 466788999999999999999999999999999999999988755554 557889999999999999999999999999
Q ss_pred EEeecCCc---eeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee
Q 016982 125 CYYEQENN---WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD 201 (379)
Q Consensus 125 ~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (379)
|++..... ......+ ..|...|.+++|+|+++.|++++.|++|++||+ .+++++..+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~------------------~~~~~~~~~~ 193 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDV------------------ESGQLLQSFH 193 (354)
T ss_dssp EECCCCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEET------------------TTCCEEEEEE
T ss_pred EEEeccccccccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeC------------------CCCeEEEEEc
Confidence 99865421 0112344 689999999999999999999999999999997 6788899999
Q ss_pred cCCcceEEEEECC--CCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCC
Q 016982 202 LSFSWAFGVKWSP--SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADET 278 (379)
Q Consensus 202 ~~~~~v~~~~~sp--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~ 278 (379)
+|...|.+++|+| ++++|++++.|+.|++||++++. .+..+..|...|.+++|+|++.+|+ ++.|+.+++|+....
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ-CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999988 57899999999999999999876 4578888999999999999999887 667899999997654
Q ss_pred CcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEee
Q 016982 279 GIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG 358 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~ 358 (379)
..... +. ...+...+.+++ |++++ ++|++|+
T Consensus 273 ~~~~~---~~-----------------------------------------~~~~~~~~~~~~-~s~~g----~~l~~g~ 303 (354)
T 2pbi_B 273 REVAI---YS-----------------------------------------KESIIFGASSVD-FSLSG----RLLFAGY 303 (354)
T ss_dssp EEEEE---EC-----------------------------------------CTTCCSCEEEEE-ECTTS----SEEEEEE
T ss_pred cEEEE---Ec-----------------------------------------CCCcccceeEEE-EeCCC----CEEEEEE
Confidence 31111 00 012344688888 77666 8999999
Q ss_pred cCceEEEEeCCCcccccc
Q 016982 359 LDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 359 ~Dg~v~iW~~~~~~~~~~ 376 (379)
.||.|++||+.+++.+..
T Consensus 304 ~d~~i~vwd~~~~~~~~~ 321 (354)
T 2pbi_B 304 NDYTINVWDVLKGSRVSI 321 (354)
T ss_dssp TTSCEEEEETTTCSEEEE
T ss_pred CCCcEEEEECCCCceEEE
Confidence 999999999988776544
No 61
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-40 Score=283.83 Aligned_cols=248 Identities=15% Similarity=0.203 Sum_probs=202.0
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEE--EEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEK--LHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
..+|...|++++|+|++++| +++.||.|+|||+.+++... .....+|...|++++|+|++++|++++.|+.|++||+
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EEECSSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 35688999999999998655 56789999999998763221 2234579999999999999999999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEEEEeecCCceeEEEEE-eecCCcCEEEEEEcCCC-cEEE
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLI-RKRHDSSVTSVAWHPNN-VFLA 160 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~-~~l~ 160 (379)
.+++....+ ..|...|.+++|+|++. ++++++.|+.|++||+++++. ...+ ...+...+.+++|+|++ .+|+
T Consensus 169 ~~~~~~~~~--~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~---~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 169 SQKAVLKSY--NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP---ATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp TTTEEEEEE--CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC---BCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred CCCcEEEEE--cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce---eeeeeeccccccccchhhhhcccceEE
Confidence 999866555 67999999999999875 789999999999999988763 2222 14567789999999975 7899
Q ss_pred EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCce
Q 016982 161 TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSG-NTLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 161 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
+|+.|+.|++||+ +.++++..+..|...|++++|+|++ ++|++++.|++|+|||+++++ +
T Consensus 244 ~g~~d~~i~~wd~------------------~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~-~ 304 (357)
T 4g56_B 244 CGDETGNVSLVNI------------------KNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE-V 304 (357)
T ss_dssp EEESSSCEEEEES------------------SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE-E
T ss_pred EeecccceeEEEC------------------CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc-E
Confidence 9999999999997 6677888899999999999999987 579999999999999998765 3
Q ss_pred eeeeeeecCCeeeEEEec-CCcEEE-EEeCCCeEEEEecCCC
Q 016982 240 AQNVAFRDLPLRDVLFVS-EKMVIG-VGFDCNPMVFAADETG 279 (379)
Q Consensus 240 ~~~~~~~~~~i~~~~~s~-~~~~l~-~~~d~~~~i~~~~~~~ 279 (379)
+.. .+|...|++++|+| ++++|+ ++.|+.|++|+....+
T Consensus 305 ~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 305 FRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred eEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 344 46999999999998 788777 6789999999986544
No 62
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-39 Score=275.73 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=196.5
Q ss_pred cCcceeEEEeCCCCcEEEEEecCCeEEEEEecCC-----ceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-----KWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
|...|++++|+|++++||+|+.|+.|++|++... ..+.+..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 8999999999999999999999999999998532 23567888999999999999999999999999999999999
Q ss_pred cCC-c-eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC--CcEE
Q 016982 84 EGS-E-WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN--NVFL 159 (379)
Q Consensus 84 ~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l 159 (379)
... . ......+..|...|.+++|+|++++|++++.|+.|++||...... .....+ .+|...|.+++|+|+ +.+|
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~-~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW-ECVAVL-NGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEE-CCCSSCEEEEEECCSSSSCEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-eEEEEc-cCCCCcEEEEEecCCCCeeEE
Confidence 532 1 122333467999999999999999999999999999999876531 134455 789999999999998 6789
Q ss_pred EEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec-CCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC-
Q 016982 160 ATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS- 237 (379)
Q Consensus 160 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~- 237 (379)
++++.|+.|++||+...... ......+...+.. |...|.+++|++++ +|++++.||.|++||..++.
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~----------~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~ 283 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDED----------DQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEW 283 (330)
T ss_dssp EEEETTSCEEEEEEEEECTT----------SCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEE
T ss_pred EEEeCCCeEEEEEecCCCcc----------ccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCce
Confidence 99999999999997321100 0011134445554 88899999999765 78999999999999987653
Q ss_pred -ceeeeeeeecC-CeeeEEEec--CCcEEE-EEeCCCeEEEEec
Q 016982 238 -PLAQNVAFRDL-PLRDVLFVS--EKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 238 -~~~~~~~~~~~-~i~~~~~s~--~~~~l~-~~~d~~~~i~~~~ 276 (379)
........|.. .|.+++|+| ++++|+ ++.|+.+++|+..
T Consensus 284 ~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 284 KVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 12223345666 899999999 677776 6789999999864
No 63
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.7e-39 Score=271.05 Aligned_cols=243 Identities=14% Similarity=0.166 Sum_probs=207.7
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 46789999999999999999999999999999999988 7888999999999999999999999999999999999997
Q ss_pred CCceeeeEEeecCCCceeEEEECCC------CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcE
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPK------ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVF 158 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 158 (379)
... . ..+.+|...|.++.|+|. +..+++++.|+.|++||++... ....+ .+|...|.+++|+|++++
T Consensus 138 ~~~-~--~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~-~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 138 GQC-L--ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ---IEADF-IGHNSNINTLTASPDGTL 210 (319)
T ss_dssp SCE-E--EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE---EEEEE-CCCCSCEEEEEECTTSSE
T ss_pred CCe-E--EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch---hheee-cCCCCcEEEEEEcCCCCE
Confidence 543 2 334679999999999985 4489999999999999998765 34555 789999999999999999
Q ss_pred EEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 159 LATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 159 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
|++++.|+.|++||+ ..++++..+.. ...|.+++|+|++.+|++++. +.+++|++....
T Consensus 211 l~s~~~dg~i~iwd~------------------~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~- 269 (319)
T 3frx_A 211 IASAGKDGEIMLWNL------------------AAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQY- 269 (319)
T ss_dssp EEEEETTCEEEEEET------------------TTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEE-
T ss_pred EEEEeCCCeEEEEEC------------------CCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCe-
Confidence 999999999999997 56677777765 467999999999999988765 459999987643
Q ss_pred eeeeee--------eecCCeeeEEEecCCcEEE-EEeCCCeEEEEecC
Q 016982 239 LAQNVA--------FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 239 ~~~~~~--------~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~ 277 (379)
....+. .+...+.+++|+|||++|+ ++.|+.+++|+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 270 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 222222 2456788999999999888 66788999998653
No 64
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-38 Score=277.88 Aligned_cols=251 Identities=17% Similarity=0.199 Sum_probs=209.8
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..|++++|+|+|++||+|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+.+++...
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence 35999999999999999999999999999987 7888899999999999999999999999999999999999987554
Q ss_pred eEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEe------ecCCcCEEEEEEcCCCcEEEEee
Q 016982 91 TLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIR------KRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.+ .+...+.+++|+| ++++|++++.|+.|++||++++.. ...+. .+|...|.+++|+|++++|++++
T Consensus 202 ~~---~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~---~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 202 TL---SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL---VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EE---ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE---EEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EE---EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE---EEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 44 3567899999999 899999999999999999987762 22221 46889999999999999999999
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 243 (379)
.|+.|++||+........ ......+.+...+.+|...|.+++|+|++.+|++++.|+.|++||+.++. .+..+
T Consensus 276 ~d~~v~~wd~~~~~~~~~------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~l 348 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSD------SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN-PLLML 348 (393)
T ss_dssp TTSEEEEEEC---------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC-EEEEE
T ss_pred CCCEEEEEECCCCCCccc------ccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe-EEEEE
Confidence 999999999742111000 00012345677788999999999999999999999999999999998876 45788
Q ss_pred eeecCCeeeEEEec------CCcEEE-EEeCCCeEEEEec
Q 016982 244 AFRDLPLRDVLFVS------EKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 244 ~~~~~~i~~~~~s~------~~~~l~-~~~d~~~~i~~~~ 276 (379)
.+|...|.+++|++ ++.+|+ ++.|+.+++|+..
T Consensus 349 ~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 349 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 89999999999986 577777 6789999999864
No 65
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.1e-38 Score=281.67 Aligned_cols=287 Identities=15% Similarity=0.187 Sum_probs=232.9
Q ss_pred ccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCc
Q 016982 8 QFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSE 87 (379)
Q Consensus 8 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~ 87 (379)
+|...|++++| ++++|++|+.||.|++||+.++ +....+.+|...|.+++| ++++|++++.||.|++||+.+++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 45677998887 7899999999999999999887 678889999999999999 68899999999999999999998
Q ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCe
Q 016982 88 WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGK 167 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 167 (379)
....+ ..|...|.+++|+ +..+++++.|+.|++||+...........+ .+|...|.+++| +++++++++.||.
T Consensus 205 ~~~~~--~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~s~~~dg~ 277 (435)
T 1p22_A 205 MLNTL--IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF--DDKYIVSASGDRT 277 (435)
T ss_dssp EEEEE--CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred EEEEE--cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence 66555 6789999999997 459999999999999999887754333555 789999999999 7889999999999
Q ss_pred EEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeec
Q 016982 168 CRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD 247 (379)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 247 (379)
|++||+ .+++.+..+..|...|.+++| +++++++++.||.|++||++++. .+..+..|.
T Consensus 278 i~vwd~------------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~ 336 (435)
T 1p22_A 278 IKVWNT------------------STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA-CLRVLEGHE 336 (435)
T ss_dssp EEEEET------------------TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC-EEEEECCCS
T ss_pred EEEEEC------------------CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC-EEEEEeCCc
Confidence 999997 677888999999999999999 47899999999999999999876 457888899
Q ss_pred CCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccc
Q 016982 248 LPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESS 326 (379)
Q Consensus 248 ~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (379)
..|.+++| ++.+|+ ++.|+.+++|+......- . .. ......
T Consensus 337 ~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~---------~-~~----------~~~~~~---------------- 378 (435)
T 1p22_A 337 ELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDP---------R-AP----------AGTLCL---------------- 378 (435)
T ss_dssp SCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTST---------T-SC----------TTTTEE----------------
T ss_pred CcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCc---------c-cc----------ccchhe----------------
Confidence 99999999 566666 678999999986532100 0 00 000000
Q ss_pred cccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccc
Q 016982 327 RTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDL 374 (379)
Q Consensus 327 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~ 374 (379)
..+.+|.+.|++++ + ++ .+|++|+.||.|++||+.+....
T Consensus 379 -~~~~~h~~~v~~l~-~--~~----~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 379 -RTLVEHSGRVFRLQ-F--DE----FQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp -EEECCCSSCCCCEE-E--CS----SCEEECCSSSEEEEEC-------
T ss_pred -eeccCCCCCeEEEE-e--CC----CEEEEEeCCCEEEEEECCCCCCc
Confidence 12368999999999 4 33 78999999999999999876543
No 66
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=265.23 Aligned_cols=283 Identities=11% Similarity=0.172 Sum_probs=224.6
Q ss_pred eeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeE
Q 016982 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTL 92 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~ 92 (379)
.++|+||+++ +||+| .|++|+|||+.+++......+.+|...|++++|+|++++|++|+.|++|++||+++++....+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999876 77776 589999999999854444555678889999999999999999999999999999999866655
Q ss_pred EeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEe
Q 016982 93 VILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFS 172 (379)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d 172 (379)
..|...+.++.+ ++..+++++.++.+++|+...... ....+ .+|...+..+.+.+++++|++++.|+.|++||
T Consensus 106 --~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 106 --TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH--HVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp --ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred --cCccceEEEeec--CCCEEEEEecCCceEeeecCCCce--eEEEE-cCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 568877776655 567999999999999998877653 34444 78999999999999999999999999999999
Q ss_pred ccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEE---EEEcCCCeEEEEECCCCCceeeeeeeecCC
Q 016982 173 TFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTL---AYVGHNSMIYFVDDVGPSPLAQNVAFRDLP 249 (379)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l---~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 249 (379)
+...+ ...........+.+.|..++++|++..+ ++++.++.|++||....... ....+...
T Consensus 179 ~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~--~~~~~~~~ 242 (318)
T 4ggc_A 179 SAPGE--------------GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL--SAVDAHSQ 242 (318)
T ss_dssp SSCBT--------------TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE--EEEECSSC
T ss_pred CCCCc--------------ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc--ccccceee
Confidence 73110 1122334455677889999999976543 35678899999998876532 33446778
Q ss_pred eeeEEEecCCcEEEE-E--eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccc
Q 016982 250 LRDVLFVSEKMVIGV-G--FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESS 326 (379)
Q Consensus 250 i~~~~~s~~~~~l~~-~--~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (379)
+..+.|+|++..+++ + .|+.+++|+........
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~-------------------------------------------- 278 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA-------------------------------------------- 278 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE--------------------------------------------
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE--------------------------------------------
Confidence 999999999887663 2 58899999976543221
Q ss_pred cccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 327 RTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 327 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
.+.+|.+.|++++ |++++ ++|||||.||+|+|||+.+.
T Consensus 279 --~l~gH~~~V~~l~-~spdg----~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 279 --ELKGHTSRVLSLT-MSPDG----ATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp --EECCCSSCEEEEE-ECTTS----SCEEEEETTTEEEEECCSCC
T ss_pred --EEcCCCCCEEEEE-EcCCC----CEEEEEecCCeEEEEECCCC
Confidence 2258999999999 77666 89999999999999999764
No 67
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.3e-40 Score=284.66 Aligned_cols=277 Identities=17% Similarity=0.205 Sum_probs=224.1
Q ss_pred eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCE
Q 016982 33 EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENK 112 (379)
Q Consensus 33 ~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 112 (379)
.+..|+..+. ....++.+|.+.|++++|+|++++|++++.|++|++||+.+++....+ ..|...|.+++|+|++++
T Consensus 47 ~~~~~~~~~~--~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~--~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 47 TAVSFNPTDL--VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAI--KLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp GCCCCCCCCC--EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE--ECCCTTCCCCEECTTSSE
T ss_pred ccccccccee--EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEE--ecCCCCEEEEEECCCCCE
Confidence 3444555443 678899999999999999999999999999999999999998865554 678899999999999999
Q ss_pred EEEEeCCCeEEEEEeecCCc----eeEEEEEeecCCcCEEEEEEcCCC-cEEEEeeCCCeEEEEeccccccccccccCCC
Q 016982 113 FAVGSGAKTVCICYYEQENN----WWVSKLIRKRHDSSVTSVAWHPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGT 187 (379)
Q Consensus 113 l~~~~~d~~v~i~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 187 (379)
|++++.|+.+++|++..... ......+ .+|.+.+.++.|.|++ ..|++++.|+.|++||+
T Consensus 123 las~~~d~~v~iw~~~~~~~~~~~~~~~~~~-~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~-------------- 187 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRDGNMPVSRVL-TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDV-------------- 187 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCCCSSTTCCBC-CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECT--------------
T ss_pred EEEeeCCCcEEEEECCCCccccCCccceeec-cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEc--------------
Confidence 99999999999999875321 1122334 7899999999999974 67999999999999997
Q ss_pred ccCCcccceEEEe-----ecCCcceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcE
Q 016982 188 SSDTKFGEQILQL-----DLSFSWAFGVKWSP-SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMV 261 (379)
Q Consensus 188 ~~~~~~~~~~~~~-----~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 261 (379)
.+++++..+ .+|...|.+++|+| ++++|++++.|+.|++||++.....+..+.+|...|.+++|+|++++
T Consensus 188 ----~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 263 (380)
T 3iz6_a 188 ----TTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR 263 (380)
T ss_dssp ----TTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE
T ss_pred ----CCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe
Confidence 566666665 57888999999987 88999999999999999998665566888899999999999999998
Q ss_pred EE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeee
Q 016982 262 IG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCI 340 (379)
Q Consensus 262 l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 340 (379)
|+ ++.|+.+++|+........... .... ....+...|+++
T Consensus 264 l~s~s~D~~i~lwd~~~~~~~~~~~---~~~~------------------------------------~~~~~~~~v~~~ 304 (380)
T 3iz6_a 264 FGTGSDDGTCRLFDMRTGHQLQVYN---REPD------------------------------------RNDNELPIVTSV 304 (380)
T ss_dssp EEEECSSSCEEEEETTTTEEEEEEC---CCCS------------------------------------SSCCSSCSCSEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEec---cccc------------------------------------ccccccCceEEE
Confidence 87 6688999999987653222211 0000 002344568899
Q ss_pred eeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 341 VPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 341 ~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
+ |++++ ++|++|+.||.|++||+.+++.+..
T Consensus 305 ~-~s~~g----~~l~~g~~dg~i~vwd~~~~~~~~~ 335 (380)
T 3iz6_a 305 A-FSISG----RLLFAGYSNGDCYVWDTLLAEMVLN 335 (380)
T ss_dssp E-ECSSS----SEEEEECTTSCEEEEETTTCCEEEE
T ss_pred E-ECCCC----CEEEEEECCCCEEEEECCCCceEEE
Confidence 9 77666 8999999999999999988766543
No 68
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1e-38 Score=272.84 Aligned_cols=246 Identities=14% Similarity=0.145 Sum_probs=200.4
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++.+|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG--TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS--CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 46789999999999999999999999999999999987 6778899999999999999999999999999999999998
Q ss_pred CCceeeeEEeecCCCceeEEEECCCC----------CEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKE----------NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP 154 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 154 (379)
............|...|.+++|+|++ .++++++.|+.|++||... . ....+ ..|...|.+++|+|
T Consensus 149 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~---~~~~~-~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 149 GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-Q---IRYTF-KAHESNVNHLSISP 223 (343)
T ss_dssp SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-E---EEEEE-ECCSSCEEEEEECT
T ss_pred CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-c---eeEEE-cCccccceEEEECC
Confidence 54322221122578899999999987 7899999999999999432 2 34445 78999999999999
Q ss_pred CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECC
Q 016982 155 NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 155 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~ 234 (379)
++++|++++.|+.|++||+. ........+. +...|.+++|+|++.+++++ .|+.|++||+.
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~-----------------~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~ 284 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDIL-----------------NLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLM 284 (343)
T ss_dssp TSSEEEEEETTCEEEEEESS-----------------CCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESS
T ss_pred CCCEEEEEcCCCeEEEEECC-----------------CCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeC
Confidence 99999999999999999972 2222233332 34569999999999887755 58889999987
Q ss_pred CCCcee-eeee-----------eecCCeeeEEEecCCcEEE-EEeCCCeEEEEec
Q 016982 235 GPSPLA-QNVA-----------FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 235 ~~~~~~-~~~~-----------~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~ 276 (379)
+..... ..+. +|...+.+++|+|+|++|+ ++.|+.+++|+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 285 TQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred CCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 754321 1222 5677899999999998887 6678899999864
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.8e-38 Score=271.49 Aligned_cols=279 Identities=9% Similarity=0.010 Sum_probs=229.0
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCc-eEEEEEeccCCCceEEEEEcCCCC-EEEEEeCCCeEEEEec-
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK-WEKLHVLQKHDQIVSGIDWSVRSN-RIVTVSHDRNSYVWNQ- 83 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~- 83 (379)
..|.+.|++++|+|++++|++++.||.|++|++.+++ ......+..|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 5789999999999999999999999999999998763 223455568999999999999999 9999999999999999
Q ss_pred cCCceeeeEEeec--CCCceeEEEECCCCCEEEEEeCCCeEEEEEeec---------CCceeEEEEEeecCCcCEEEEEE
Q 016982 84 EGSEWVPTLVILR--LNRAALCVQWSPKENKFAVGSGAKTVCICYYEQ---------ENNWWVSKLIRKRHDSSVTSVAW 152 (379)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~ 152 (379)
.+++. ..+.. |...|.+++|+| ++.+++++.|+.|++||++. .. ....+ .|...+.+++|
T Consensus 88 ~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~--~~~~~v~~~~~ 158 (342)
T 1yfq_A 88 GSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL---NSNNT--KVKNKIFTMDT 158 (342)
T ss_dssp SSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES---CSSSS--SSCCCEEEEEE
T ss_pred cCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC---eeeEE--eeCCceEEEEe
Confidence 88763 34466 899999999999 99999999999999999986 43 12233 48889999999
Q ss_pred cCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcc-cc--eEEEeecCCcceEEEEECC-CCCEEEEEcCCCeE
Q 016982 153 HPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKF-GE--QILQLDLSFSWAFGVKWSP-SGNTLAYVGHNSMI 228 (379)
Q Consensus 153 ~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i 228 (379)
+|++ +++++.++.|++||+. . .. .......|...+.+++|+| +++++++++.||.|
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~------------------~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i 218 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLP------------------LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRV 218 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESS------------------CCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEE
T ss_pred cCCc--EEEEeCCCeEEEEECC------------------ccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcE
Confidence 9887 9999999999999972 2 11 2233446678899999999 99999999999999
Q ss_pred EEEECCCC-----CceeeeeeeecC---------CeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccC
Q 016982 229 YFVDDVGP-----SPLAQNVAFRDL---------PLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTS 293 (379)
Q Consensus 229 ~v~d~~~~-----~~~~~~~~~~~~---------~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~ 293 (379)
++|++... ......+..|.. +|.+++|+|++++|+ ++.|+.+++|+...... ..
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~---~~-------- 287 (342)
T 1yfq_A 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK---IK-------- 287 (342)
T ss_dssp EEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE---EE--------
T ss_pred EEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH---hh--------
Confidence 99999876 245567777754 899999999998777 56788999999765431 11
Q ss_pred CCCCccCCCcccccceeeccccccCccccccccccccccc-ccceeeeeeecccCCcccceEEEeecCce-EEEEe
Q 016982 294 SSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTH-VNCINCIVPLREAGSSRITRFTTSGLDGK-IVTWD 367 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~-v~iW~ 367 (379)
.+.+| ...|++++ +++ ++|++|+.||. .+.|.
T Consensus 288 -----------------------------------~~~~~h~~~v~~~~---~~~----~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 288 -----------------------------------NFAKFNEDSVVKIA---CSD----NILCLATSDDTFKTNAA 321 (342)
T ss_dssp -----------------------------------ECCCCSSSEEEEEE---ECS----SEEEEEEECTHHHHCSS
T ss_pred -----------------------------------hhhcccCCCceEec---CCC----CeEEEEecCCccccccc
Confidence 12466 89999988 555 89999999999 55555
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=309.18 Aligned_cols=311 Identities=11% Similarity=0.099 Sum_probs=222.0
Q ss_pred eeccCcceeEEEeCCC-CcEEEEEecCCeEEEEEecCCceEEEEEeccC------------------CCceEEEEEcCCC
Q 016982 6 VHQFAQCITCHAWSPD-HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKH------------------DQIVSGIDWSVRS 66 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~ 66 (379)
+.+|.++|++++|+|+ +..|++|+.||.| +||+.++ +.+..+..| ...|.+++|+|+|
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 4678999999999996 5789999999999 9999987 566666655 5679999999999
Q ss_pred CEEEEEeCCCeEEEEeccCCceeeeEEee----------------cCCCceeEEEEC----CCC-CEEEEEeCC-----C
Q 016982 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVIL----------------RLNRAALCVQWS----PKE-NKFAVGSGA-----K 120 (379)
Q Consensus 67 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~----------------~~~~~v~~~~~~----~~~-~~l~~~~~d-----~ 120 (379)
++|++++.|+.|++||+.+++.+....+. .+...|.+++|+ |++ .++++|+.+ .
T Consensus 224 ~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~ 303 (902)
T 2oaj_A 224 LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQ 303 (902)
T ss_dssp SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCC
T ss_pred CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCc
Confidence 99999999999999999988754321110 134578999994 443 456666554 2
Q ss_pred eEEEEEeecC-----------------------------Cc-----------------e---eE--------EEEEe---
Q 016982 121 TVCICYYEQE-----------------------------NN-----------------W---WV--------SKLIR--- 140 (379)
Q Consensus 121 ~v~i~~~~~~-----------------------------~~-----------------~---~~--------~~~~~--- 140 (379)
.+.+|++... .. . .+ .+.+.
T Consensus 304 ~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~ 383 (902)
T 2oaj_A 304 SLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPS 383 (902)
T ss_dssp CEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTT
T ss_pred eEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCC
Confidence 5666663200 00 0 00 00000
Q ss_pred --------------ecCCcCEE----------------------------------EEEEcCCCcEEEEeeCCCeEEEEe
Q 016982 141 --------------KRHDSSVT----------------------------------SVAWHPNNVFLATTSTDGKCRVFS 172 (379)
Q Consensus 141 --------------~~~~~~v~----------------------------------~~~~~p~~~~l~~~~~d~~i~v~d 172 (379)
..|...|+ .++|+|++++|++|+.|++|++||
T Consensus 384 g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd 463 (902)
T 2oaj_A 384 GIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYD 463 (902)
T ss_dssp CCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEE
T ss_pred CCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEE
Confidence 01112333 345578899999999999999999
Q ss_pred ccccccccccccCCCccCCcccceE-EEe-----ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC---------
Q 016982 173 TFIKGVDIKEKKEGTSSDTKFGEQI-LQL-----DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS--------- 237 (379)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~--------- 237 (379)
+..... .....+ ..+ .+|...|.+++|+|+|++||+|+.||+|++||+.+++
T Consensus 464 ~~~g~~-------------~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~ 530 (902)
T 2oaj_A 464 ASHGDI-------------QDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530 (902)
T ss_dssp SSCCTT-------------TTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------
T ss_pred CCCccc-------------cCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCC
Confidence 732210 000001 111 2788899999999999999999999999999987652
Q ss_pred -----------------------------------ceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcE
Q 016982 238 -----------------------------------PLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIW 281 (379)
Q Consensus 238 -----------------------------------~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~ 281 (379)
+++..+.+|..+|++++|+||| +|| ++.|+.+++|+.......
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~ 609 (902)
T 2oaj_A 531 SGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII 609 (902)
T ss_dssp -------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE
T ss_pred CcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE
Confidence 1246677899999999999999 888 556788999996543211
Q ss_pred EEEEEecccccCCCCCccCCCcccccceeeccccccCccccccccccccc-ccccceeeeeeec-----ccCCcccceEE
Q 016982 282 TFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGG-THVNCINCIVPLR-----EAGSSRITRFT 355 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-----~~~~~~~~~l~ 355 (379)
.. ..+ ..+. +|.+.|++|+ |+ +|+ +++++|+
T Consensus 610 ~~-~~~----------------------------------------~~~~~gh~~~V~sv~-Fs~~~~~~Dg-~~~~~l~ 646 (902)
T 2oaj_A 610 YM-ENI----------------------------------------REISGAQSACVTCIE-FVIMEYGDDG-YSSILMV 646 (902)
T ss_dssp EE-EEG----------------------------------------GGTCSSCCCCEEEEE-EEEEECTTSS-SEEEEEE
T ss_pred EE-eeh----------------------------------------hHhccccccceEEEE-EEEEecCCCC-CcceEEE
Confidence 00 000 0223 8999999999 88 776 6679999
Q ss_pred EeecCceEEEEeC---CCcccccc
Q 016982 356 TSGLDGKIVTWDL---ESQEDLLN 376 (379)
Q Consensus 356 t~~~Dg~v~iW~~---~~~~~~~~ 376 (379)
+|+.||+|++||+ .+|+.+..
T Consensus 647 sgs~D~tv~~wd~~p~~~g~~~~~ 670 (902)
T 2oaj_A 647 CGTDMGEVITYKILPASGGKFDVQ 670 (902)
T ss_dssp EEETTSEEEEEEEEECGGGCEEEE
T ss_pred EEecCCcEEEEEEecCCCCcEEEE
Confidence 9999999999999 66665543
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-38 Score=300.41 Aligned_cols=244 Identities=11% Similarity=0.096 Sum_probs=194.9
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
..++|.+.|++++|+|++++||+|+.||.|+||+..+. +....+ .|..+|.+++|+| +++|++++.|++|++||+.
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--EVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--EEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--EEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 35789999999999999999999999999999998775 444444 4788999999999 8899999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEE--------EEEeecCCcCEEEEEEcCC-
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVS--------KLIRKRHDSSVTSVAWHPN- 155 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~p~- 155 (379)
+++....+ .+...|++++|+|+++++++|+.||.|++||++........ ..+ .+|.+.|.+++|+|+
T Consensus 88 ~~~~~~~~---~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~-~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 88 SQKVLTTV---FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFP-AARLSPIVSIQWNPRD 163 (902)
T ss_dssp TCSEEEEE---ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCS-SSCCCCCCEEEEETTE
T ss_pred CCcEEEEE---cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccc-ccCCCCeEEEEEccCC
Confidence 98866555 36789999999999999999999999999999876521000 112 568899999999996
Q ss_pred CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC------------------CcceEEEEECCCCC
Q 016982 156 NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS------------------FSWAFGVKWSPSGN 217 (379)
Q Consensus 156 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~sp~~~ 217 (379)
+..|++++.|+.| +||+ +.++++..+..| ...|.+++|+|+|+
T Consensus 164 ~~~l~~g~~dg~v-lWd~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSL------------------VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp EEEEEEECSSCEE-EEET------------------TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred CCEEEEEeCCCcE-EEEC------------------CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 4789999999999 9997 445555555443 46799999999999
Q ss_pred EEEEEcCCCeEEEEECCCCCceee-eee---e-------------ecCCeeeEEEec----CC-cEEEEE-eCC-----C
Q 016982 218 TLAYVGHNSMIYFVDDVGPSPLAQ-NVA---F-------------RDLPLRDVLFVS----EK-MVIGVG-FDC-----N 269 (379)
Q Consensus 218 ~l~~~~~d~~i~v~d~~~~~~~~~-~~~---~-------------~~~~i~~~~~s~----~~-~~l~~~-~d~-----~ 269 (379)
+|++++.|+.|++||+++++.+.. .+. . +..+|++++|++ ++ .+|+++ .+. .
T Consensus 225 ~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999999999999999988764321 121 1 244799999964 43 566655 432 6
Q ss_pred eEEEEe
Q 016982 270 PMVFAA 275 (379)
Q Consensus 270 ~~i~~~ 275 (379)
+.+|..
T Consensus 305 v~~~~~ 310 (902)
T 2oaj_A 305 LTMIDL 310 (902)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777763
No 72
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.2e-37 Score=273.28 Aligned_cols=284 Identities=16% Similarity=0.219 Sum_probs=238.2
Q ss_pred ceeccCcce-eEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 5 AVHQFAQCI-TCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 5 ~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
.+.+|.+.| +++. +++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+ +++|++++.|+.|++||+
T Consensus 113 ~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~ 186 (445)
T 2ovr_B 113 VLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTG--KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 186 (445)
T ss_dssp EEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTC--CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred EecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCC--cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEEC
Confidence 467888765 5544 56899999999999999999987 6888999999999999998 569999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.+++....+ ..|...|.++.|+ ++.+++++.|+.|++||+.+++ ....+ ..|...+.+++| +++++++++
T Consensus 187 ~~~~~~~~~--~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~---~~~~~-~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 187 ETGECIHTL--YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ---CLHVL-MGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp TTTEEEEEE--CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC---EEEEE-ECCSSCEEEEEE--CSSCEEEEE
T ss_pred CcCcEEEEE--CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc---EEEEE-cCCcccEEEEEE--CCCEEEEEc
Confidence 999865554 6789999999996 6789999999999999999877 45555 789999999999 788999999
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 243 (379)
.|+.|++||+ .+++++..+..|...|.+++| ++.++++++.|+.|++||+.+++ .+..+
T Consensus 257 ~dg~i~iwd~------------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~-~~~~~ 315 (445)
T 2ovr_B 257 YDFMVKVWDP------------------ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN-CIHTL 315 (445)
T ss_dssp TTSCEEEEEG------------------GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC-EEEEE
T ss_pred CCCEEEEEEC------------------CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC-EEEEE
Confidence 9999999997 667888899999999999999 78999999999999999998876 45777
Q ss_pred eeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccc
Q 016982 244 AFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDA 322 (379)
Q Consensus 244 ~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (379)
..|...+.++.++ +.+++ ++.|+.+++|+...........
T Consensus 316 ~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~------------------------------------- 356 (445)
T 2ovr_B 316 TGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ------------------------------------- 356 (445)
T ss_dssp CCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC-------------------------------------
T ss_pred cCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEc-------------------------------------
Confidence 8888888888774 45555 6779999999986543222110
Q ss_pred cccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccccC
Q 016982 323 VESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 323 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
....|...|++++ ++ + ++|++|+.||.|++||+.+++.++.+
T Consensus 357 ------~~~~~~~~v~~~~-~~--~----~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 357 ------GPNKHQSAVTCLQ-FN--K----NFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp ------STTSCSSCEEEEE-EC--S----SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ------cCCCCCCCEEEEE-EC--C----CEEEEEeCCCeEEEEECCCCceeeee
Confidence 1134888999999 43 2 79999999999999999998877654
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.4e-39 Score=272.52 Aligned_cols=257 Identities=19% Similarity=0.221 Sum_probs=201.1
Q ss_pred EEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCeEEEE
Q 016982 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSP--KENKFAVGSGAKTVCIC 125 (379)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i~ 125 (379)
..+.+|.+.|++++|+|+|++|++++.|++|++||+.+++......+.+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3457899999999999999999999999999999999876444445578999999999986 48999999999999999
Q ss_pred EeecCCceeEEEEEeecCCcCEEEEEEcCC--CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 126 YYEQENNWWVSKLIRKRHDSSVTSVAWHPN--NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
|++++... ....+ .+|...|.+++|+|+ +.+|++++.|+.|++||+... ........+..|
T Consensus 87 d~~~~~~~-~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~---------------~~~~~~~~~~~h 149 (316)
T 3bg1_A 87 REENGTWE-KSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE---------------GQWEVKKINNAH 149 (316)
T ss_dssp CCSSSCCC-EEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS---------------SCEEECCBTTSS
T ss_pred ECCCCcce-EEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC---------------CCcceeeeeccc
Confidence 99876411 23344 689999999999998 789999999999999997210 001123445678
Q ss_pred CcceEEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCC--ceeeeeeeecCCeeeEEEecCC----c
Q 016982 204 FSWAFGVKWSPS-----------------GNTLAYVGHNSMIYFVDDVGPS--PLAQNVAFRDLPLRDVLFVSEK----M 260 (379)
Q Consensus 204 ~~~v~~~~~sp~-----------------~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~----~ 260 (379)
...+.+++|+|+ +++|++++.|+.|++||+.... .....+.+|...|.+++|+|++ .
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence 888999999997 4789999999999999987543 2456778899999999999986 6
Q ss_pred EEE-EEeCCCeEEEEecCCC--cEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccce
Q 016982 261 VIG-VGFDCNPMVFAADETG--IWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCI 337 (379)
Q Consensus 261 ~l~-~~~d~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 337 (379)
+|+ ++.|+.+++|+..... .+.. . .+.+|.+.|
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~------------------------~--------------------~~~~~~~~v 265 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSP------------------------K--------------------LLHKFNDVV 265 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBC------------------------C--------------------EEEECSSCE
T ss_pred eEEEEcCCCeEEEEEccCccccchhh------------------------h--------------------hhhcCCCcE
Confidence 666 7789999999875421 1100 0 124688899
Q ss_pred eeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 338 NCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 338 ~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
.+++ |++++ ++||+|+.||.|++|+...
T Consensus 266 ~~v~-~sp~g----~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 266 WHVS-WSITA----NILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEE-ECTTT----CCEEEEESSSCEEEEEECT
T ss_pred EEEE-EcCCC----CEEEEEcCCCeEEEEEECC
Confidence 9999 77666 8999999999999999863
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.3e-38 Score=312.00 Aligned_cols=335 Identities=13% Similarity=0.181 Sum_probs=243.1
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC--CCEEEEEeCCCeEEEEe
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR--SNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~ 82 (379)
.+.+|.+.|++++|+|++++||+++.||.|++||+.++ +.+..+.+|...|.+++|+|+ +.++++++.|+.|++||
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 45689999999999999999999999999999999987 688889999999999999994 56899999999999999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeE---------------------------
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV--------------------------- 135 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~--------------------------- 135 (379)
+.+++....+ .+|...|.+++|+|+++++++++.||.|++||+........
T Consensus 730 ~~~~~~~~~~--~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 730 LNQKECRNTM--FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp TTSSSEEEEE--CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred CCCcchhhee--cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 9999865554 67999999999999999999999999999999876532100
Q ss_pred ------------------------EEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCC
Q 016982 136 ------------------------SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDT 191 (379)
Q Consensus 136 ------------------------~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 191 (379)
...+..+|...+.+++|+|+++++++++.++.|++||+
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~------------------ 869 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNI------------------ 869 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEET------------------
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEc------------------
Confidence 11111367788999999999999999999999999997
Q ss_pred cccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCce----------------------------e---
Q 016982 192 KFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL----------------------------A--- 240 (379)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~----------------------------~--- 240 (379)
.++..+..+.+|...|.+++|+|+|++|++++.|+.|++||+.+.... .
T Consensus 870 ~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1249)
T 3sfz_A 870 DSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLI 949 (1249)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEE
T ss_pred CCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEE
Confidence 667788888999999999999999999999999999999986431000 0
Q ss_pred -----eeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEe-cCCCcEEEEEEecc---cccCCCCCccCCCccccccee
Q 016982 241 -----QNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAA-DETGIWTFIKFLDE---RKTSSSGPKYGSQFSEAFGKL 310 (379)
Q Consensus 241 -----~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 310 (379)
.....+...+.+++|+|++++++ ++.++.+.+|+. .............. ......+.............+
T Consensus 950 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~v 1029 (1249)
T 3sfz_A 950 AGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQV 1029 (1249)
T ss_dssp EESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEE
T ss_pred ecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 00011234577888888888777 556777888773 11111111100000 000000000000000000011
Q ss_pred eccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 311 YGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
+ .. .........+|...|.+++ +++++ .+++++.||.|++||+.+++.++.
T Consensus 1030 w-d~--------~~~~~~~~~~~~~~v~~~~-~~~~~-----~l~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A 1030 W-NW--------QTGDYVFLQAHQETVKDFR-LLQDS-----RLLSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp E-ET--------TTTEEECCBCCSSCEEEEE-ECSSS-----EEEEEESSSEEEEEETTTTCCCEE
T ss_pred E-EC--------CCCceEEEecCCCcEEEEE-EcCCC-----cEEEEECCCcEEEEECCCCceeEE
Confidence 0 00 0011113457999999999 66554 789999999999999998876654
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.6e-38 Score=288.22 Aligned_cols=296 Identities=14% Similarity=0.110 Sum_probs=242.1
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCC--ceEEEEEeccCCCc-eEEEEEcC--CCCEEEEEeCCCeEEEE
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE--KWEKLHVLQKHDQI-VSGIDWSV--RSNRIVTVSHDRNSYVW 81 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~d~~i~vw 81 (379)
..|.+.|++++|+|++++|++++ ++.|++|++.++ ..+....+.+|... |.+++|+| ++++|++++.|+.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 45789999999999999999998 789999999864 11366778999999 99999999 99999999999999999
Q ss_pred eccCC------ceeeeEEeecCCCceeEEEECCCCCEEEEEeCC----CeEEEEEeecCCceeEEEEEeecCCcCEEEEE
Q 016982 82 NQEGS------EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVA 151 (379)
Q Consensus 82 ~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 151 (379)
|+.++ +......+..|...|.+++|+|++++|++++.+ +.|++|| .+. ....+ ..|...|.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~---~~~~~-~~~~~~v~~~~ 167 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGN---SLGEV-SGHSQRINACH 167 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCC---EEEEC-CSCSSCEEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCC---cceee-ecCCccEEEEE
Confidence 99765 333444456789999999999999999999987 6788877 333 34555 78999999999
Q ss_pred EcCCCc-EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCc---ceEEEEECCC-CCEEEEEcCCC
Q 016982 152 WHPNNV-FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS---WAFGVKWSPS-GNTLAYVGHNS 226 (379)
Q Consensus 152 ~~p~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~-~~~l~~~~~d~ 226 (379)
|+|+++ ++++++.|+.|++||+ ..++.+..+..|.. .|.+++|+|+ +++|++++.|+
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 229 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQG------------------PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR 229 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEET------------------TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC
T ss_pred ECCCCCcEEEEEeCCCcEEEEeC------------------CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC
Confidence 999997 8999999999999996 66788888988988 9999999999 99999999999
Q ss_pred eEEEEECCCCCceeeee-e---eecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCC
Q 016982 227 MIYFVDDVGPSPLAQNV-A---FRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGS 301 (379)
Q Consensus 227 ~i~v~d~~~~~~~~~~~-~---~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
.|++||+.+++. +..+ . .|..+|.+++|+ ++++|+ ++.|+.+++|+........... ..
T Consensus 230 ~i~vwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~----------- 293 (615)
T 1pgu_A 230 KISCFDGKSGEF-LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT---LD----------- 293 (615)
T ss_dssp CEEEEETTTCCE-EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE---CC-----------
T ss_pred eEEEEECCCCCE-eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc---CC-----------
Confidence 999999988764 4566 5 789999999999 888877 5668899999987543211111 00
Q ss_pred CcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccccC
Q 016982 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
...+...+.++. ++ ++ .+|++++.||.|++||+.+++.+..+
T Consensus 294 ----------------------------~~~~~~~~~~~~-~~-~~----~~l~~~~~~g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 294 ----------------------------KQQLGNQQVGVV-AT-GN----GRIISLSLDGTLNFYELGHDEVLKTI 335 (615)
T ss_dssp ----------------------------TTCGGGCEEEEE-EE-ET----TEEEEEETTSCEEEEETTEEEEEEEE
T ss_pred ----------------------------CCcccCceeEEE-eC-CC----CeEEEEECCCCEEEEECCCCcEEEEE
Confidence 012445677777 54 43 79999999999999999887665443
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.1e-37 Score=294.67 Aligned_cols=248 Identities=13% Similarity=0.177 Sum_probs=219.2
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+..|..+|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 50 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 45679999999999999999999999999999999987 6778889999999999999999999999999999999998
Q ss_pred CC-ceeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC--CCcEEE
Q 016982 85 GS-EWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP--NNVFLA 160 (379)
Q Consensus 85 ~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~ 160 (379)
++ .... ....|...|.+++|+| +++.+++++.||.|++||+..... ...+...+...+.+++|+| ++++|+
T Consensus 128 ~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 128 NNWALEQ--TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp GTSEEEE--EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred CCceEEE--EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 87 4333 3367889999999999 889999999999999999987663 3333245558899999999 899999
Q ss_pred EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCcee
Q 016982 161 TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA 240 (379)
Q Consensus 161 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~ 240 (379)
+++.||.|++||+ ..++++..+..|...|.+++|+|++++|++++.||.|++||+.++. ..
T Consensus 203 ~~~~dg~i~~~d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~ 263 (814)
T 3mkq_A 203 TASDDLTIKIWDY------------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK-VE 263 (814)
T ss_dssp EECTTSEEEEEET------------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS-EE
T ss_pred EEeCCCEEEEEEC------------------CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EE
Confidence 9999999999997 6677888899999999999999999999999999999999998876 45
Q ss_pred eeeeeecCCeeeEEEecCCc--EEEEEeCCCeEEEEecCC
Q 016982 241 QNVAFRDLPLRDVLFVSEKM--VIGVGFDCNPMVFAADET 278 (379)
Q Consensus 241 ~~~~~~~~~i~~~~~s~~~~--~l~~~~d~~~~i~~~~~~ 278 (379)
..+..+...+.+++|+|++. +++++.++.+.+|.....
T Consensus 264 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 264 KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 77777888999999999987 688899999999987543
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-37 Score=286.13 Aligned_cols=242 Identities=15% Similarity=0.184 Sum_probs=196.9
Q ss_pred cceeccCcc-eeEEEeCC--CCcEEEEEecCCeEEEEEecCC------ceEEEEEeccCCCceEEEEEcCCCCEEEEEeC
Q 016982 4 IAVHQFAQC-ITCHAWSP--DHAMVAFCPNNNEVHIYKLIQE------KWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH 74 (379)
Q Consensus 4 ~~~~~~~~~-i~~~~~s~--~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 74 (379)
..+.+|... |++++|+| ++++||+|+.||.|++||+.++ .......+..|..+|.+++|+|++++|++++.
T Consensus 57 ~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 136 (615)
T 1pgu_A 57 VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 136 (615)
T ss_dssp EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred eEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEecc
Confidence 346789999 99999999 9999999999999999999755 45778888999999999999999999999998
Q ss_pred C----CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEEEEeecCCceeEEEEEeecCCc---C
Q 016982 75 D----RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDS---S 146 (379)
Q Consensus 75 d----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~---~ 146 (379)
+ +.|.+|| .++... .+..|...|.+++|+|+++ .+++++.|+.|++||+...+ ....+ ..|.. .
T Consensus 137 ~~~~~~~v~~~d--~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~---~~~~~-~~~~~~~~~ 208 (615)
T 1pgu_A 137 GRDNFGVFISWD--SGNSLG--EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK---FSASD-RTHHKQGSF 208 (615)
T ss_dssp CSSCSEEEEETT--TCCEEE--ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE---EEEEE-CSSSCTTCC
T ss_pred CCCCccEEEEEE--CCCcce--eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc---eeeee-cccCCCCce
Confidence 7 6888888 444333 3467999999999999998 89999999999999987766 45555 77888 9
Q ss_pred EEEEEEcCC-CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-e---cCCcceEEEEECCCCCEEEE
Q 016982 147 VTSVAWHPN-NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-D---LSFSWAFGVKWSPSGNTLAY 221 (379)
Q Consensus 147 v~~~~~~p~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~sp~~~~l~~ 221 (379)
|.+++|+|+ +++|++++.|+.|++||+ .+++.+..+ . .|...|.+++|+ ++++|++
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~------------------~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDG------------------KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEET------------------TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEEC------------------CCCCEeEEecccccccCCceEEEEEc-CCCEEEE
Confidence 999999999 999999999999999997 667788888 5 889999999999 9999999
Q ss_pred EcCCCeEEEEECCCCCceeeeeeee----cCCeeeEEEecCCcEEE-EEeCCCeEEEE
Q 016982 222 VGHNSMIYFVDDVGPSPLAQNVAFR----DLPLRDVLFVSEKMVIG-VGFDCNPMVFA 274 (379)
Q Consensus 222 ~~~d~~i~v~d~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~-~~~d~~~~i~~ 274 (379)
++.|+.|++||+.+++. ...+..+ ...+.++.|+ ++.+++ ++.++.+++|+
T Consensus 270 ~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKC-VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp EETTSEEEEEETTTTEE-EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred EcCCCcEEEEECCCCcE-EEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEE
Confidence 99999999999987543 2333333 2334445554 333322 44455555554
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.9e-37 Score=272.65 Aligned_cols=281 Identities=15% Similarity=0.093 Sum_probs=233.4
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEc--CCCCEEEEEeCCCeEEEEe
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~vw~ 82 (379)
.+.+|.+.|++++|+|++ +|++|+.||.|++||+.++ +.+..+.+|...|.+++|+ +++++|++++.|+.|++||
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG--CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC--cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 456799999999999988 8999999999999999987 7888999999999999998 5778999999999999999
Q ss_pred ccCCceee---------------------eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee
Q 016982 83 QEGSEWVP---------------------TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK 141 (379)
Q Consensus 83 ~~~~~~~~---------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~ 141 (379)
+.++.... .....+|...+.++ +++++++++++.|+.|++||+.+.. ....+ .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~-~ 307 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK---CLYIL-S 307 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE---EEEEE-C
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc---EEEEe-c
Confidence 98775322 22335677777776 5678999999999999999998876 45555 7
Q ss_pred cCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEE
Q 016982 142 RHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAY 221 (379)
Q Consensus 142 ~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 221 (379)
+|...|.+++|+|+++++++++.|+.|++||+ .+++++..+.+|...|.+++|+ +.+|++
T Consensus 308 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~------------------~~~~~~~~~~~h~~~v~~~~~~--~~~l~s 367 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERKRCISASMDTTIRIWDL------------------ENGELMYTLQGHTALVGLLRLS--DKFLVS 367 (464)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEET------------------TTTEEEEEECCCSSCEEEEEEC--SSEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC------------------CCCcEEEEEeCCCCcEEEEEEc--CCEEEE
Confidence 89999999999999999999999999999997 6788899999999999999998 579999
Q ss_pred EcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCC
Q 016982 222 VGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGS 301 (379)
Q Consensus 222 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
++.||.|++||+.+.... ... .+...+..++|++++++++++.|+.+++|+.........
T Consensus 368 ~s~dg~v~vwd~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~------------------ 427 (464)
T 3v7d_B 368 AAADGSIRGWDANDYSRK-FSY-HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHA------------------ 427 (464)
T ss_dssp EETTSEEEEEETTTCCEE-EEE-ECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEES------------------
T ss_pred EeCCCcEEEEECCCCcee-eee-cCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEeh------------------
Confidence 999999999999887643 222 356678889999999999988899999999876542110
Q ss_pred CcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEe
Q 016982 302 QFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWD 367 (379)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~ 367 (379)
...+|...|.+++ |+. . .++++++.||.+.+|-
T Consensus 428 ---------------------------~~~~~~~~v~~v~-~~~-~----~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 428 ---------------------------NILKDADQIWSVN-FKG-K----TLVAAVEKDGQSFLEI 460 (464)
T ss_dssp ---------------------------CTTTTCSEEEEEE-EET-T----EEEEEEEETTEEEEEE
T ss_pred ---------------------------hhccCCCcEEEEE-ecC-C----EEEEEEEeCCeEEEEE
Confidence 1246888999999 542 2 5777777888766553
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.4e-38 Score=272.99 Aligned_cols=290 Identities=12% Similarity=0.117 Sum_probs=229.4
Q ss_pred ceeEEEeCCCCcEE-EEEecCCeEEEEEecCCce--EEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeccCCc
Q 016982 12 CITCHAWSPDHAMV-AFCPNNNEVHIYKLIQEKW--EKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQEGSE 87 (379)
Q Consensus 12 ~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~ 87 (379)
....++++|+...+ ++++.||.|++|++..... .....+.+|...|++++|+| ++++|++++.|+.|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34457888876544 4578899999999865411 23445778999999999999 89999999999999999999873
Q ss_pred e-----eeeEEeecCCCceeEEEECCCC-CEEEEEeCCCeEEEEEeecCCceeEEEEEe-ecCCcCEEEEEEcCCCcEEE
Q 016982 88 W-----VPTLVILRLNRAALCVQWSPKE-NKFAVGSGAKTVCICYYEQENNWWVSKLIR-KRHDSSVTSVAWHPNNVFLA 160 (379)
Q Consensus 88 ~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~ 160 (379)
. .....+..|...|.+++|+|++ ++|++++.|+.|++||++++. ....+. ..|...|.+++|+|++++|+
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA---AVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE---EEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC---ccEEEecCCCCCceEEEEECCCCCEEE
Confidence 2 2333446799999999999998 699999999999999998876 333332 46899999999999999999
Q ss_pred EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcc-eEEEEECCCCCEEEEE---cCCCeEEEEECCC
Q 016982 161 TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSW-AFGVKWSPSGNTLAYV---GHNSMIYFVDDVG 235 (379)
Q Consensus 161 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~sp~~~~l~~~---~~d~~i~v~d~~~ 235 (379)
+++.|+.|++||+ +.++.+..+ ..|.+. +..+.|+|++++|+++ +.|+.|++||+++
T Consensus 193 ~~~~d~~i~iwd~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 193 TSCRDKRVRVIEP------------------RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp EEETTSEEEEEET------------------TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred EEecCCcEEEEeC------------------CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 9999999999997 567777777 677665 8999999999999999 7999999999988
Q ss_pred CCceeeeee-eecCCeeeEEEecCCcEEE-EE-eCCCeEEEEecCCCc-EEEEEEecccccCCCCCccCCCcccccceee
Q 016982 236 PSPLAQNVA-FRDLPLRDVLFVSEKMVIG-VG-FDCNPMVFAADETGI-WTFIKFLDERKTSSSGPKYGSQFSEAFGKLY 311 (379)
Q Consensus 236 ~~~~~~~~~-~~~~~i~~~~~s~~~~~l~-~~-~d~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (379)
......... .+...+.+++|+|++++|+ ++ .|+.+++|+...... ......
T Consensus 255 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~------------------------- 309 (402)
T 2aq5_A 255 LEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM------------------------- 309 (402)
T ss_dssp CSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE-------------------------
T ss_pred ccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc-------------------------
Confidence 765333333 4667899999999999886 55 589999999876542 222110
Q ss_pred ccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccc
Q 016982 312 GQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED 373 (379)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~ 373 (379)
..|...|++++ |++++ .++++ .|+.+++|++.+++.
T Consensus 310 -------------------~~~~~~v~~~~-~sp~~----~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 310 -------------------FSSKESQRGMG-YMPKR----GLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp -------------------ECCSSCCSEEE-ECCGG----GSCGG--GTEEEEEEEEETTEE
T ss_pred -------------------cccCCcccceE-Eeccc----cccee--cceeEEEEEcCCCcE
Confidence 12568899999 76655 67654 577999999987543
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-37 Score=266.33 Aligned_cols=263 Identities=17% Similarity=0.196 Sum_probs=212.4
Q ss_pred EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeE
Q 016982 45 EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTV 122 (379)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v 122 (379)
+.+..+.+|...|++++|+|++++|++++.|+.|++||+..........+..|...|.+++|+|+ +++|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 35667889999999999999999999999999999999986554455555789999999999987 9999999999999
Q ss_pred EEEEeecCCceeEEEEEeecCCcCEEEEEEcCC--CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe
Q 016982 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN--NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL 200 (379)
Q Consensus 123 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (379)
++||++.+... ....+ ..|...|.+++|+|+ +++|++++.|+.|++||+.. ........+
T Consensus 82 ~iwd~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~----------------~~~~~~~~~ 143 (379)
T 3jrp_A 82 LIWKEENGRWS-QIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE----------------NGTTSPIII 143 (379)
T ss_dssp EEEEEETTEEE-EEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT----------------TSCCCEEEE
T ss_pred EEEEcCCCcee-Eeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC----------------CCceeeEEe
Confidence 99999987521 23333 678999999999999 89999999999999999721 112334556
Q ss_pred ecCCcceEEEEECC-------------CCCEEEEEcCCCeEEEEECCCCCc---eeeeeeeecCCeeeEEEecC---CcE
Q 016982 201 DLSFSWAFGVKWSP-------------SGNTLAYVGHNSMIYFVDDVGPSP---LAQNVAFRDLPLRDVLFVSE---KMV 261 (379)
Q Consensus 201 ~~~~~~v~~~~~sp-------------~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~i~~~~~s~~---~~~ 261 (379)
..|...|.+++|+| ++.+|++++.|+.|++||++.... +...+..|..+|.+++|+|+ +.+
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 78899999999999 699999999999999999987653 33566778999999999999 788
Q ss_pred EE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeee
Q 016982 262 IG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCI 340 (379)
Q Consensus 262 l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 340 (379)
|+ ++.|+.+++|+............. ....|...|+++
T Consensus 224 l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------------------------------------~~~~~~~~v~~~ 262 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQGPWKKTLL-----------------------------------------KEEKFPDVLWRA 262 (379)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEES-----------------------------------------SSSCCSSCEEEE
T ss_pred EEEEeCCCEEEEEeCCCCCccceeeee-----------------------------------------ccccCCCcEEEE
Confidence 77 667899999998764311111100 113588899999
Q ss_pred eeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 341 VPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 341 ~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
+ |++++ ++|++++.||.|++|++..+
T Consensus 263 ~-~s~~g----~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 263 S-WSLSG----NVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp E-ECSSS----CCEEEEESSSSEEEEEEEET
T ss_pred E-EcCCC----CEEEEecCCCcEEEEeCCCC
Confidence 9 77666 89999999999999999853
No 81
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=266.53 Aligned_cols=288 Identities=13% Similarity=0.113 Sum_probs=224.7
Q ss_pred ceeccCcceeEEEeCCC---CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q 016982 5 AVHQFAQCITCHAWSPD---HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVW 81 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 81 (379)
.+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+........+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 45689999999999999 699999999999999999974335557888999999999999999999999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEE--CCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEE
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQW--SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFL 159 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 159 (379)
|+.+++... ...|...|.+++| +|++++|++++.|+.|++||+++... ...+ ..+ ..+.++.+.+ ..+
T Consensus 114 d~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~-~~~-~~~~~~~~~~--~~~ 183 (368)
T 3mmy_A 114 DLSSNQAIQ---IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP---MMVL-QLP-ERCYCADVIY--PMA 183 (368)
T ss_dssp ETTTTEEEE---EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC---SEEE-ECS-SCEEEEEEET--TEE
T ss_pred EcCCCCcee---eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE---EEEE-ecC-CCceEEEecC--Cee
Confidence 999987544 3568999999999 89999999999999999999988773 4444 333 4667777654 578
Q ss_pred EEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCE----EEEEcCCCeEEEEECC
Q 016982 160 ATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNT----LAYVGHNSMIYFVDDV 234 (379)
Q Consensus 160 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~----l~~~~~d~~i~v~d~~ 234 (379)
++++.++.+++|++. ........+ ..+...+..+.+.++... +++++.|+.|++||+.
T Consensus 184 ~~~~~~~~i~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 184 VVATAERGLIVYQLE-----------------NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp EEEEGGGCEEEEECS-----------------SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred EEEeCCCcEEEEEec-----------------cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 888899999999972 112222222 122344555655554444 9999999999999998
Q ss_pred CCC--ceeeeeeeecC------------CeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCcc
Q 016982 235 GPS--PLAQNVAFRDL------------PLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKY 299 (379)
Q Consensus 235 ~~~--~~~~~~~~~~~------------~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
... .....+..|.. +|.+++|+|++++|+ ++.|+.+++|+..... ...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~---~~~-------------- 309 (368)
T 3mmy_A 247 PPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART---KLK-------------- 309 (368)
T ss_dssp CSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---EEE--------------
T ss_pred CCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc---EEE--------------
Confidence 763 23355555554 799999999998777 6679999999977542 111
Q ss_pred CCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 300 GSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
.+.+|...|++++ |++++ ++|++|+.|+..+.|++.+
T Consensus 310 -----------------------------~~~~~~~~v~~~~-~s~~g----~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 310 -----------------------------TSEQLDQPISACC-FNHNG----NIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp -----------------------------ECCCCSSCEEEEE-ECTTS----SCEEEEECCCSTTCGGGCC
T ss_pred -----------------------------EecCCCCCceEEE-ECCCC----CeEEEEecccccccccccC
Confidence 2257899999999 77666 8999999998766666543
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-36 Score=268.10 Aligned_cols=253 Identities=10% Similarity=0.062 Sum_probs=203.7
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCc-eEEEEEec-------------------------------------
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK-WEKLHVLQ------------------------------------- 51 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~------------------------------------- 51 (379)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+.+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4689999999999976665 57899999998874 11333333
Q ss_pred -----------------cCCCceEEEEEcCCCCEE-EEEeCCCeEEEEecc--CCceeeeEEeecCCCceeEEEECCCCC
Q 016982 52 -----------------KHDQIVSGIDWSVRSNRI-VTVSHDRNSYVWNQE--GSEWVPTLVILRLNRAALCVQWSPKEN 111 (379)
Q Consensus 52 -----------------~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (379)
+|...|.+++|+|++++| ++++.|+.|++||+. +++....+....+...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 234479999999999996 889999999999999 777666665446788999999999999
Q ss_pred EEEEEeCCCeEEEEEeecCCcee-EEEEEeecCCcCEEEEEEcCC---CcEEEEeeCCCeEEEEeccccccccccccCCC
Q 016982 112 KFAVGSGAKTVCICYYEQENNWW-VSKLIRKRHDSSVTSVAWHPN---NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGT 187 (379)
Q Consensus 112 ~l~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~p~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 187 (379)
+|++++.++.+++|++....... ....+ .+|...|.+++|+|+ +++|++++.|+.|++||+
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~-------------- 227 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHY-------------- 227 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEE--------------
T ss_pred EEEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC--------------
Confidence 99999999999999987765321 11234 679999999999999 999999999999999997
Q ss_pred ccCCcccceEEE-eecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeee---------------------
Q 016982 188 SSDTKFGEQILQ-LDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF--------------------- 245 (379)
Q Consensus 188 ~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--------------------- 245 (379)
..++++.. +.+|...|.+++|+ ++++|++++.|+.|++||+.+++. +..+..
T Consensus 228 ----~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 228 ----PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN-LSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp ----SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE-EEEEECHHHHGGGCCTTSBC-------
T ss_pred ----CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE-eeeecchhhhhhhhhhccccccccccc
Confidence 55666666 56899999999999 999999999999999999998763 344432
Q ss_pred ----ecCCeeeEEEecCCcEEEEE--eCCCeEEEEe--cCCCcEEEE
Q 016982 246 ----RDLPLRDVLFVSEKMVIGVG--FDCNPMVFAA--DETGIWTFI 284 (379)
Q Consensus 246 ----~~~~i~~~~~s~~~~~l~~~--~d~~~~i~~~--~~~~~~~~~ 284 (379)
....+.+++|+|++++|+++ .++.+++|+. ...+.+...
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~ 348 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALK 348 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeec
Confidence 23568899999999988854 5889999998 444444443
No 83
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8e-36 Score=264.28 Aligned_cols=282 Identities=16% Similarity=0.184 Sum_probs=237.8
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+ +++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+ ++.|++++.|+.|++||+.
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS
T ss_pred EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC
Confidence 456799999999997 579999999999999999987 7888999999999999996 5689999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
+++....+ ..|...+.+++| +++.+++++.|+.|++||+++.. ....+ ..|...|.+++| +++++++++.
T Consensus 228 ~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~---~~~~~-~~~~~~v~~~~~--~~~~l~~~~~ 297 (445)
T 2ovr_B 228 TGQCLHVL--MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET---CLHTL-QGHTNRVYSLQF--DGIHVVSGSL 297 (445)
T ss_dssp SCCEEEEE--ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE---EEEEE-CCCSSCEEEEEE--CSSEEEEEET
T ss_pred CCcEEEEE--cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc---EeEEe-cCCCCceEEEEE--CCCEEEEEeC
Confidence 98865554 678999999999 68899999999999999998876 45555 789999999999 7899999999
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA 244 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 244 (379)
|+.|++||+ .+++++..+..|...+.++.++ +++|++++.||.|++||+.+++. +..+.
T Consensus 298 d~~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~-~~~~~ 356 (445)
T 2ovr_B 298 DTSIRVWDV------------------ETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC-LQTLQ 356 (445)
T ss_dssp TSCEEEEET------------------TTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE-EEEEC
T ss_pred CCeEEEEEC------------------CCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcE-EEEEc
Confidence 999999997 6788888999999999888874 67999999999999999988764 46666
Q ss_pred e---ecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcc
Q 016982 245 F---RDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGN 320 (379)
Q Consensus 245 ~---~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
. |..+|.+++|+ +.+|+ ++.|+.+++|+.............
T Consensus 357 ~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------------------------------- 401 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTL--------------------------------- 401 (445)
T ss_dssp STTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEEC---------------------------------
T ss_pred cCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecc---------------------------------
Confidence 4 77889999996 45555 677999999998765433222111
Q ss_pred cccccccccccccccceeeeeeecccCCcccceEEEeecCce----EEEEeCCCc
Q 016982 321 DAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGK----IVTWDLESQ 371 (379)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~----v~iW~~~~~ 371 (379)
...+|.+.|++++ |++++ .+|++|+.||. |.+||+...
T Consensus 402 --------~~~~~~~~v~~~~-~s~~~----~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 402 --------ESGGSGGVVWRIR-ASNTK----LVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp --------TTGGGTCEEEEEE-ECSSE----EEEEEECSSSSSCCEEEEEECCCC
T ss_pred --------ccCCCCceEEEEE-ecCCE----EEEEEcccCCCCccEEEEEECCCC
Confidence 1136888999999 76655 89999999997 999999763
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-38 Score=279.19 Aligned_cols=304 Identities=13% Similarity=0.088 Sum_probs=224.1
Q ss_pred EeCCCCcEEEEEecCCeEEEEEecCCceEEEEEe-ccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeccC---Cceee-
Q 016982 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVL-QKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQEG---SEWVP- 90 (379)
Q Consensus 17 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~~---~~~~~- 90 (379)
.|+|+++.+++++ .|+... +.+..+ .+|.+.|++++|+| ++++|++++.|++|++||+.+ +....
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g---~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 104 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRG---KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSS 104 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCC---CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSC
T ss_pred hcCCccccccccc------cccccc---eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccce
Confidence 4678888887765 377544 577777 89999999999999 999999999999999999976 43222
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEee---cCCcee-----EEEEEe-ec--CCcCEEEEE--EcCCCc
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYE---QENNWW-----VSKLIR-KR--HDSSVTSVA--WHPNNV 157 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~---~~~~~~-----~~~~~~-~~--~~~~v~~~~--~~p~~~ 157 (379)
... ..|...|.+++|+|++++|++++.|+.|++||++ .+.... ....+. .. +...+.++. ++|+++
T Consensus 105 ~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 105 SLT-YDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp SEE-EECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eee-ccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 222 3589999999999999999999999999999995 333110 011110 11 566777777 568899
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec--CCcceEEEEECCCCCEEEEEcCCCeEEEEECCC
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL--SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~ 235 (379)
+|++++.|+.|++||+ +.++++..+.. |...|++++|+|++++|++++.||.|++||+++
T Consensus 184 ~l~~~~~d~~i~iwd~------------------~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 184 LLVALTNLSRVIIFDI------------------RTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp EEEEEETTSEEEEEET------------------TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCeEEEEeC------------------CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 9999999999999997 67788888887 789999999999999999999999999999998
Q ss_pred CCceeeeee-eecCCeeeEEEec----CCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccce
Q 016982 236 PSPLAQNVA-FRDLPLRDVLFVS----EKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGK 309 (379)
Q Consensus 236 ~~~~~~~~~-~~~~~i~~~~~s~----~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (379)
+. .+..+. .|..+|.+++|+| ++.+|+ ++.|+.+++|+........... ....... ...+.+.-..
T Consensus 246 ~~-~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~ 317 (437)
T 3gre_A 246 NV-LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI---NSDEQPS----MEHFLPIEKG 317 (437)
T ss_dssp TE-EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE---SSSSCCC----GGGGSCBCSS
T ss_pred cc-EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE---cCCCCCc----cceecccccc
Confidence 65 445554 5677899996654 677777 5567889999987654322221 1110000 0000000000
Q ss_pred eeccccccCcccccccccccccc--cccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccccC
Q 016982 310 LYGQSKYGVGNDAVESSRTRGGT--HVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
+ ....+.+ |...|++++ ++ ++ ++|+||+.||.|++||+.+++.++.+
T Consensus 318 l---------------~~~~~~~~~~~~~v~~l~-~~-~~----~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 318 L---------------EELNFCGIRSLNALSTIS-VS-ND----KILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp G---------------GGCCCCCCCSGGGGCCEE-EE-TT----EEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred c---------------ccceecccccCCceEEEE-EC-Cc----eEEEecCCCCeEEEEECCCcccceEE
Confidence 0 0012344 999999999 65 44 79999999999999999998876543
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-37 Score=291.29 Aligned_cols=265 Identities=17% Similarity=0.267 Sum_probs=222.2
Q ss_pred cceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC--CCEEEEEeCCCeEEEE
Q 016982 4 IAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR--SNRIVTVSHDRNSYVW 81 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw 81 (379)
..+.+|.++|++++|+|++++|++|+.||.|++|++.++.......+.+|..+|.+++|+|+ +++|++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 35689999999999999999999999999999999986666888899999999999999988 8999999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC-----
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP----- 154 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p----- 154 (379)
|+.+++.........|...|.+++|+|+ ++.+++++.||.|++||++...... ...+ ..|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~-~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIII-DAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEE-ECCSSCEEEEEECCCC---
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEe-ecCCCceEEEEecCccccc
Confidence 9999875555666789999999999999 9999999999999999998874321 2233 68999999999999
Q ss_pred --------CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCC---CCEEEEEc
Q 016982 155 --------NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS---GNTLAYVG 223 (379)
Q Consensus 155 --------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~ 223 (379)
+++++++++.||.|++||+... .........+..|...|.+++|+|+ +++|++++
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~--------------~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSD--------------AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETT--------------TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCC--------------cccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 5899999999999999997210 0122566778899999999999999 89999999
Q ss_pred CCCeEEEEECCCCCc----eeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEE
Q 016982 224 HNSMIYFVDDVGPSP----LAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFI 284 (379)
Q Consensus 224 ~d~~i~v~d~~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~ 284 (379)
.||.|++||+.++.. .......|...|++++|+|+|++++ ++.|+.+++|+.+..+.|...
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~ 292 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBCC
T ss_pred cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcccc
Confidence 999999999987632 1223345778899999999998877 678999999998876655543
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-38 Score=274.43 Aligned_cols=264 Identities=11% Similarity=0.069 Sum_probs=210.1
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
+.....|.+++|+|||+++|+++.|++|+ |.... ..+.+|...|.+++|+|+| .++.+.+|+.+..
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~-----~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA-----KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN 77 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC-----SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccccc-----ceecCCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence 34568999999999999999999999999 65443 3457999999999999999 4666666654433
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCc-----CEEEEEEcCCCcEEEE
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDS-----SVTSVAWHPNNVFLAT 161 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~l~~ 161 (379)
. .+. ..+...|.+++|+|+|+.||+++.||.|++||.+. +...+ . |.. .+.+++|+|||++|++
T Consensus 78 ~---~~~-~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l-~-~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 78 G---LLN-SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNL-D-SKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp C---SST-TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEEC-C-CSSCSTTTCEEEEEECSSSSCEEE
T ss_pred e---Eee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeec-c-CCCccccccEEEEEEcCCCCEEEE
Confidence 2 222 24578899999999999999999999999999433 34444 4 554 5999999999999999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccc-------eEEEe----ecCCcceEEEEECCCCCEEEEEcCCCeEEE
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE-------QILQL----DLSFSWAFGVKWSPSGNTLAYVGHNSMIYF 230 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v 230 (379)
|+.||+|++||+. .+. .+.++ .+|..+|.+++|+|+| +++++.|+.|++
T Consensus 147 gs~DGtVkIWd~~------------------~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrl 206 (588)
T 2j04_A 147 GNEDGELQFFSIR------------------KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFS 206 (588)
T ss_dssp EETTSEEEEEECC------------------CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEE
T ss_pred EcCCCEEEEEECC------------------CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEE
Confidence 9999999999972 232 35665 5677899999999999 778889999999
Q ss_pred EECCCCCc--eeeee-eeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCccccc
Q 016982 231 VDDVGPSP--LAQNV-AFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAF 307 (379)
Q Consensus 231 ~d~~~~~~--~~~~~-~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (379)
||+.++.. ..+++ .+|...|.+++|+ |+.|+++.++.+++|+..+...-..
T Consensus 207 Wd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~------------------------ 260 (588)
T 2j04_A 207 MTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSL------------------------ 260 (588)
T ss_dssp ECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEE------------------------
T ss_pred EECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEE------------------------
Confidence 99988763 22455 3678899999999 6888877789999999776431111
Q ss_pred ceeeccccccCcccccccccccccccccceeeeeee--cccCCcccceEEEeecCceEEEEeCC
Q 016982 308 GKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPL--REAGSSRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
..+|.+.|..++ + ++++ ..|++++.||+ ++|.++
T Consensus 261 ----------------------~~gh~~~V~~va-~~~s~d~----~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 261 ----------------------KTGSLENFHIIP-LNHEKES----TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp ----------------------ECSCCSCCCEEE-ETTCSSC----EEEEECSSCEE-EEEESS
T ss_pred ----------------------EcCCCceEEEEE-eeeCCCC----CEEEEEcCCCC-EEEeec
Confidence 137999999999 6 6555 89999999999 999985
No 87
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.9e-36 Score=255.66 Aligned_cols=268 Identities=18% Similarity=0.204 Sum_probs=211.7
Q ss_pred EEEEEecCCceEEEEEeccCCCceEEEEEcCC-CCEEEEEeCCCeEEEEeccCCce---eeeEEeecCCCceeEEEECCC
Q 016982 34 VHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR-SNRIVTVSHDRNSYVWNQEGSEW---VPTLVILRLNRAALCVQWSPK 109 (379)
Q Consensus 34 i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~ 109 (379)
++++...+.+.....+|++|.+.|++++|+|+ +++|+||+.|++|++||+.+.+. .+...+.+|...|.+++|+|+
T Consensus 18 ~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp --------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence 55555556656777889999999999999998 58999999999999999987542 233345678999999999999
Q ss_pred CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCcc
Q 016982 110 ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSS 189 (379)
Q Consensus 110 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 189 (379)
+++|++++.|+.|++|+..... ..... ..+...+..+.+++++++|++++.|+.+++||+.
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~--------------- 158 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGT---TTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL--------------- 158 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTE---EEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT---------------
T ss_pred CCEEEEEcccccceEEeecccc---eeeee-cCCCCceeEEEEeecCccceeecCCCeEEEEEeC---------------
Confidence 9999999999999999988776 23333 6778889999999999999999999999999972
Q ss_pred CCcccceEEEeecCCcceEEEEECCCC--CEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEe
Q 016982 190 DTKFGEQILQLDLSFSWAFGVKWSPSG--NTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGF 266 (379)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~ 266 (379)
...........|...+..++|++++ .++++++.|+.|++||+.+.+ ....+.+|..+|++++|+|++++|+ ++.
T Consensus 159 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 159 --GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp --SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred --CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 2334445567788899999999864 578899999999999998876 4577888999999999999999888 668
Q ss_pred CCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeeccc
Q 016982 267 DCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREA 346 (379)
Q Consensus 267 d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 346 (379)
|+.+++|+......... + .+...|.+++ ++++
T Consensus 236 Dg~i~iwd~~~~~~~~~--------------------------~---------------------~~~~~v~~~~-~~~~ 267 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYT--------------------------L---------------------DGGDIINALC-FSPN 267 (340)
T ss_dssp TCEEEEEETTTTEEEEE--------------------------E---------------------ECSSCEEEEE-ECSS
T ss_pred CCeEEEEEeccCceeee--------------------------e---------------------cCCceEEeee-cCCC
Confidence 89999998765432111 1 2445788888 6665
Q ss_pred CCcccceEEEeecCceEEEEeCCCcccccc
Q 016982 347 GSSRITRFTTSGLDGKIVTWDLESQEDLLN 376 (379)
Q Consensus 347 ~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~ 376 (379)
+ ++++++.|+.|++||++++..+..
T Consensus 268 ~-----~~~~~~~d~~i~iwd~~~~~~~~~ 292 (340)
T 4aow_A 268 R-----YWLCAATGPSIKIWDLEGKIIVDE 292 (340)
T ss_dssp S-----SEEEEEETTEEEEEETTTTEEEEE
T ss_pred C-----ceeeccCCCEEEEEECCCCeEEEe
Confidence 4 677888899999999988765543
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.7e-36 Score=264.23 Aligned_cols=308 Identities=15% Similarity=0.191 Sum_probs=232.9
Q ss_pred CcceeEEEeCCCC----------cEEEEEec----CCeEEEEEec--------------------------CCceEEEEE
Q 016982 10 AQCITCHAWSPDH----------AMVAFCPN----NNEVHIYKLI--------------------------QEKWEKLHV 49 (379)
Q Consensus 10 ~~~i~~~~~s~~~----------~~l~~~~~----dg~i~i~~~~--------------------------~~~~~~~~~ 49 (379)
.-+..++.|.|+. .++++|+. ...|.++++. +++.+ ...
T Consensus 45 ~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~ 123 (430)
T 2xyi_A 45 EWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIE-IEI 123 (430)
T ss_dssp SSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEE-EEE
T ss_pred CCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceE-EEE
Confidence 4577899999965 46788765 3578888653 01111 344
Q ss_pred eccCCCceEEEEEcCC-CCEEEEEeCCCeEEEEeccC--------CceeeeEEeecCCCceeEEEECCCCC-EEEEEeCC
Q 016982 50 LQKHDQIVSGIDWSVR-SNRIVTVSHDRNSYVWNQEG--------SEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGA 119 (379)
Q Consensus 50 ~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 119 (379)
...|.+.|++++|+|+ +++|++++.||.|++|++.. +.......+..|...+.+++|+|++. +|++++.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 5668999999999997 67899999999999999986 22334455578999999999999988 99999999
Q ss_pred CeEEEEEeecCCc--e--eEEEEEeecCCcCEEEEEEcC-CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCccc
Q 016982 120 KTVCICYYEQENN--W--WVSKLIRKRHDSSVTSVAWHP-NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194 (379)
Q Consensus 120 ~~v~i~~~~~~~~--~--~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
|.|++|++..... . .....+ ..|...|.+++|+| ++.+|++++.|+.|++||+... ...
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~---------------~~~ 267 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN---------------NTS 267 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS---------------CSS
T ss_pred CeEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC---------------CCC
Confidence 9999999987331 1 112333 68999999999999 6789999999999999997210 112
Q ss_pred ceEEEeecCCcceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCc-EEE-EEeCCCeE
Q 016982 195 EQILQLDLSFSWAFGVKWSPSGN-TLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKM-VIG-VGFDCNPM 271 (379)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~-~~~d~~~~ 271 (379)
..+..+..|...|++++|+|++. +|++++.||.|++||++.....+..+..|...|.+++|+|+++ +|+ ++.|+.++
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 56667778899999999999887 6889999999999999986666688888999999999999985 455 67899999
Q ss_pred EEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCccc
Q 016982 272 VFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRI 351 (379)
Q Consensus 272 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 351 (379)
+|+....+.... ....... .......+.+|...|++++ |++++
T Consensus 348 iwd~~~~~~~~~---~~~~~~~-----------------------------~~~~~~~~~~h~~~v~~~~-~~p~~---- 390 (430)
T 2xyi_A 348 VWDLSKIGEEQS---TEDAEDG-----------------------------PPELLFIHGGHTAKISDFS-WNPNE---- 390 (430)
T ss_dssp EEEGGGTTCCCC---HHHHHHC-----------------------------CTTEEEECCCCSSCEEEEE-ECSSS----
T ss_pred EEeCCCCccccC---ccccccC-----------------------------CcceEEEcCCCCCCceEEE-ECCCC----
Confidence 999875331100 0000000 0001113468999999999 66655
Q ss_pred c-eEEEeecCceEEEEeCCCc
Q 016982 352 T-RFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 352 ~-~l~t~~~Dg~v~iW~~~~~ 371 (379)
+ +|++++.||.|++|++.+.
T Consensus 391 ~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 391 PWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTEEEEEETTSEEEEEEECHH
T ss_pred CCEEEEEECCCCEEEeEcccc
Confidence 6 9999999999999999753
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-36 Score=265.70 Aligned_cols=250 Identities=19% Similarity=0.232 Sum_probs=211.8
Q ss_pred cceeccCcceeEEEeCCC----C---cEEEEEecCCeEEEEEecCCce---EEEEEeccC-----CCceEEEEEc----C
Q 016982 4 IAVHQFAQCITCHAWSPD----H---AMVAFCPNNNEVHIYKLIQEKW---EKLHVLQKH-----DQIVSGIDWS----V 64 (379)
Q Consensus 4 ~~~~~~~~~i~~~~~s~~----~---~~l~~~~~dg~i~i~~~~~~~~---~~~~~~~~~-----~~~v~~~~~~----~ 64 (379)
..+.+|..+|++++|+|+ + ++|++++.||.|++|++.+++. .....+..| ...|.+++|+ |
T Consensus 56 ~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 135 (397)
T 1sq9_A 56 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 135 (397)
T ss_dssp EEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--
T ss_pred eEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC
Confidence 346789999999999999 9 9999999999999999987631 116777788 5899999999 9
Q ss_pred CCCE-EEEEeCCCeEEEEeccC------Cceee-----eEEe-----ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEe
Q 016982 65 RSNR-IVTVSHDRNSYVWNQEG------SEWVP-----TLVI-----LRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127 (379)
Q Consensus 65 ~~~~-l~~~~~d~~i~vw~~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~ 127 (379)
++++ |++++.|+.|++||+.+ ++... .+.. ..|...+.+++|+|++ ++++++.|+.|++||+
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL 214 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEET
T ss_pred CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEEC
Confidence 9999 99999999999999988 55433 3322 4478899999999999 9999999999999999
Q ss_pred ecCCceeEEEEEeec---C---CcCEEEEEEcCCCcEEEEeeCC---CeEEEEeccccccccccccCCCccCCcccceEE
Q 016982 128 EQENNWWVSKLIRKR---H---DSSVTSVAWHPNNVFLATTSTD---GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL 198 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
+... ....+ .. | ...+.+++|+|++++|++++.| +.|++||+ ..++.+.
T Consensus 215 ~~~~---~~~~~-~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~------------------~~~~~~~ 272 (397)
T 1sq9_A 215 STLR---PLYNF-ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET------------------EFGERIG 272 (397)
T ss_dssp TTTE---EEEEE-ECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET------------------TTCCEEE
T ss_pred CCCc---eeEEE-eccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC------------------CCCcccc
Confidence 8876 34555 56 8 8999999999999999999999 99999997 5677788
Q ss_pred Eeec-------------CCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee------ee-------------
Q 016982 199 QLDL-------------SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA------FR------------- 246 (379)
Q Consensus 199 ~~~~-------------~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~------~~------------- 246 (379)
.+.. |...|.+++|+|++++|++++.|+.|++||+.+.+ .+..+. .|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE-RITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-EEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-eeEEEecccCcccchhhhhcccccccc
Confidence 8887 89999999999999999999999999999998876 446676 66
Q ss_pred --cCCeeeEEEecCC----------cEEE-EEeCCCeEEEEecC
Q 016982 247 --DLPLRDVLFVSEK----------MVIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 247 --~~~i~~~~~s~~~----------~~l~-~~~d~~~~i~~~~~ 277 (379)
..+|.+++|+|++ ++|+ ++.|+.+++|+...
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 8899999999998 5666 67799999998764
No 90
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.5e-36 Score=259.10 Aligned_cols=250 Identities=13% Similarity=0.151 Sum_probs=210.9
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++++|++++.||.|++||+.+++......+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~ 126 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 126 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEec
Confidence 45679999999999999999999999999999999988555566667899999999999999999999999999999998
Q ss_pred CCcee--eeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEee------------------cCCceeEEEEEeecCC
Q 016982 85 GSEWV--PTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYE------------------QENNWWVSKLIRKRHD 144 (379)
Q Consensus 85 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~------------------~~~~~~~~~~~~~~~~ 144 (379)
.++.. .......|...|.+++|+|++++|++++.|+.|++||++ ... ....+ ..|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~ 202 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE---LMFES-SSSC 202 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC---EEEEC-CCCS
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhh---heEec-CCCC
Confidence 87631 122224578999999999999999999999999999965 222 34445 6889
Q ss_pred cCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcC
Q 016982 145 SSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGH 224 (379)
Q Consensus 145 ~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 224 (379)
..+.+++|+|++++|++++.|+.|++||+ ..++++..+..|...|.+++|+|++.+|+++ .
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 263 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHDSTVCLADA------------------DKKMAVATLASETLPLLAVTFITESSLVAAG-H 263 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEG------------------GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-T
T ss_pred CeEEEEEECCCCCEEEEEeCCCEEEEEEC------------------CCCceeEEEccCCCCeEEEEEecCCCEEEEE-e
Confidence 99999999999999999999999999997 6778889999999999999999999988887 8
Q ss_pred CCeEEEEECCC--CC-------------------------------ce-------eeeeeeecCCeeeEEEe-cCC---c
Q 016982 225 NSMIYFVDDVG--PS-------------------------------PL-------AQNVAFRDLPLRDVLFV-SEK---M 260 (379)
Q Consensus 225 d~~i~v~d~~~--~~-------------------------------~~-------~~~~~~~~~~i~~~~~s-~~~---~ 260 (379)
|+.|++|++.. +. .. .....+|..+|++++|. ++| .
T Consensus 264 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~ 343 (372)
T 1k8k_C 264 DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS 343 (372)
T ss_dssp TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS
T ss_pred CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee
Confidence 99999999877 21 00 11224788999999977 565 7
Q ss_pred EEE-EEeCCCeEEEEecC
Q 016982 261 VIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 261 ~l~-~~~d~~~~i~~~~~ 277 (379)
+|+ ++.|+.+++|+...
T Consensus 344 ~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 344 QFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEEETTSEEEEEEHHH
T ss_pred eEEEecCCCceEEEEecC
Confidence 776 67799999998754
No 91
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.5e-36 Score=280.05 Aligned_cols=245 Identities=17% Similarity=0.170 Sum_probs=204.8
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++++|++|+.||.|++||+.++ .....+.+|...|.+++|+|++++|++++.|++|++||..
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC--cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 46789999999999999999999999999999999987 7788899999999999999999999999999999999987
Q ss_pred CCceeeeE-EeecCCCceeEEEECCCC--CEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 85 GSEWVPTL-VILRLNRAALCVQWSPKE--NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 85 ~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
........ ....|...|.+++|+|++ ..+++++.|+.|++||++... ....+ .+|...|.+++|+|++++|++
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---~~~~~-~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---LRSTL-AGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---EEEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---EEEEE-cCCCCCEEEEEEeCCCCEEEE
Confidence 65321111 113577889999999986 589999999999999998876 45556 789999999999999999999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQ 241 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~ 241 (379)
++.|+.|++||+ .+++++..+.. ...+.+++|+|++.+|++++ ++.|++||+.+... +.
T Consensus 579 g~~Dg~i~iwd~------------------~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~-~~ 637 (694)
T 3dm0_A 579 GGKDGVVLLWDL------------------AEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSI-VE 637 (694)
T ss_dssp EETTSBCEEEET------------------TTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEE-EE
T ss_pred EeCCCeEEEEEC------------------CCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCC-hh
Confidence 999999999997 56677766654 46799999999999887765 56799999987653 23
Q ss_pred eeeee-------------------cCCeeeEEEecCCcEEE-EEeCCCeEEEEec
Q 016982 242 NVAFR-------------------DLPLRDVLFVSEKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 242 ~~~~~-------------------~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~ 276 (379)
.+..+ ...+++++|+|+|++|+ ++.|+.|++|+..
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 638 DLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred hhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 33211 11368899999999888 6678999999854
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.3e-36 Score=260.26 Aligned_cols=245 Identities=12% Similarity=0.080 Sum_probs=196.0
Q ss_pred eccCcceeEEEeCC-CCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC
Q 016982 7 HQFAQCITCHAWSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG 85 (379)
Q Consensus 7 ~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 85 (379)
.+|...|++++|+| ++++|++++.|+.|++||+.+...........|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~- 193 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD- 193 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-
Confidence 46999999999999 7899999999999999999975333333334455889999999999999999999999999994
Q ss_pred CceeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEEEEeecCCce-eEEEEEeecCCcCEEEEEEcC-CCcEEEEe
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNW-WVSKLIRKRHDSSVTSVAWHP-NNVFLATT 162 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~ 162 (379)
++... .+..|...|.+++|+|+++ ++++++.|+.|++||++..... .....+ .|...|.+++|+| ++++|+++
T Consensus 194 ~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 194 GHEIF--KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp SCEEE--EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEE
T ss_pred CCEEE--EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEE
Confidence 44333 3467999999999999998 9999999999999999874311 133333 6999999999999 99999999
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC-----------------CcceEEEEECCCCCEEEEEcCC
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS-----------------FSWAFGVKWSPSGNTLAYVGHN 225 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~sp~~~~l~~~~~d 225 (379)
+.|+.|++||+.. ++....+..| ...+..++|+|++++ +++.|
T Consensus 270 ~~d~~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d 329 (383)
T 3ei3_B 270 DQRNEIRVYSSYD------------------WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDK 329 (383)
T ss_dssp ESSSEEEEEETTB------------------TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCC
T ss_pred cCCCcEEEEECCC------------------CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCC
Confidence 9999999999732 2222222211 234556778888877 77899
Q ss_pred CeEEEEECCCCCceeeeeee--ecCCeeeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 226 SMIYFVDDVGPSPLAQNVAF--RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 226 ~~i~v~d~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
+.|++||+.+++. +..+.. +...+..++|+|++++|+++.|+.+++|+.++
T Consensus 330 ~~i~iwd~~~~~~-~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 330 RTIDIYDANSGGL-VHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp CCEEEEETTTCCE-EEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred CeEEEEecCCCce-eeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 9999999988764 466665 45667778999999999988899999998753
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.8e-37 Score=263.72 Aligned_cols=259 Identities=14% Similarity=0.146 Sum_probs=209.8
Q ss_pred cCcceeEEEeCCC----CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEec
Q 016982 9 FAQCITCHAWSPD----HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 9 ~~~~i~~~~~s~~----~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~ 83 (379)
|...|++++|+|+ +++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 5688999999998 679999999999999999887 67888899999999999999 8999999999999999999
Q ss_pred cCCceeeeEEe-ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCcee-------------------------EEE
Q 016982 84 EGSEWVPTLVI-LRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW-------------------------VSK 137 (379)
Q Consensus 84 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~-------------------------~~~ 137 (379)
.+++....+.. ..|...|.+++|+|++++|++++.|+.|++||++...... ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 99875444311 4688999999999999999999999999999998653100 001
Q ss_pred EEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCC--
Q 016982 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS-- 215 (379)
Q Consensus 138 ~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-- 215 (379)
.. ..|...|.+++|+ +++|++++.|+.|++||+........... ........+..+..|...|.+++|+|+
T Consensus 226 ~~-~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 226 TR-DIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIK----PSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp EC-SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCC----TTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred cc-cCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccc----cCCcchheeccccccCCcEEEEEEcCCCC
Confidence 11 3489999999998 77999999999999999743221111110 011223557788889999999999999
Q ss_pred CCEEEEEcCCCeEEEEECCCCCc---eeeeeeee--cCCeeeEEEecCCcEEE-EEeCCCeEEEEec
Q 016982 216 GNTLAYVGHNSMIYFVDDVGPSP---LAQNVAFR--DLPLRDVLFVSEKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 216 ~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~--~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~ 276 (379)
+++|++++.||.|++||+.++.. ....+..| ...|.+++|+|++++|+ ++.|+.+++|+..
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999999999988653 23356666 68999999999999888 6678899999853
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.6e-36 Score=264.30 Aligned_cols=255 Identities=16% Similarity=0.217 Sum_probs=212.9
Q ss_pred ceeccCcceeEEEeCCC-CcEEEEEecCCeEEEEEecC--------CceEEEEEeccCCCceEEEEEcCCCC-EEEEEeC
Q 016982 5 AVHQFAQCITCHAWSPD-HAMVAFCPNNNEVHIYKLIQ--------EKWEKLHVLQKHDQIVSGIDWSVRSN-RIVTVSH 74 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 74 (379)
....|.+.|++++|+|+ +.+||+++.+|.|++|++.. +.......+.+|...|.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 45778999999999997 68999999999999999986 22366778889999999999999998 9999999
Q ss_pred CCeEEEEeccCCce-----eeeEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEE
Q 016982 75 DRNSYVWNQEGSEW-----VPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVT 148 (379)
Q Consensus 75 d~~i~vw~~~~~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~ 148 (379)
||.|++|++..+.. ........|...|.+++|+| ++.+|++++.|+.|++||++..........+ ..|...|.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEVN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-ECCSSCEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-ecCCCCeE
Confidence 99999999987421 11233457889999999999 7789999999999999999876321134444 68999999
Q ss_pred EEEEcCCCc-EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCC-EEEEEcCCC
Q 016982 149 SVAWHPNNV-FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGN-TLAYVGHNS 226 (379)
Q Consensus 149 ~~~~~p~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~ 226 (379)
+++|+|++. +|++++.||.|++||+. ....++..+..|...|.+++|+|+++ +|++++.|+
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~-----------------~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLR-----------------NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETT-----------------CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCC-----------------CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 999999986 78999999999999972 33566788888999999999999985 688999999
Q ss_pred eEEEEECCCCC-------------ceeeeeeeecCCeeeEEEecCCc-EEE-EEeCCCeEEEEecC
Q 016982 227 MIYFVDDVGPS-------------PLAQNVAFRDLPLRDVLFVSEKM-VIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 227 ~i~v~d~~~~~-------------~~~~~~~~~~~~i~~~~~s~~~~-~l~-~~~d~~~~i~~~~~ 277 (379)
.|++||+.... .++....+|...|.+++|+|++. +|+ ++.|+.+++|..+.
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 99999987622 35566677888999999999998 666 67788999998764
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.4e-37 Score=269.83 Aligned_cols=253 Identities=15% Similarity=0.104 Sum_probs=194.1
Q ss_pred ceeccCcceeEEEeCC-CCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec
Q 016982 5 AVHQFAQCITCHAWSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ 83 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 83 (379)
.+.+|.+.|++++|+| ++++|++|+.||+|++||++++..........+...+.+++|+|++++|++|+.||.|++||+
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 4568999999999998 789999999999999999988633333333344556889999999999999999999999999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 162 (379)
.+.. + ..+..|...|.+++|+|++. ++++++.|+.|++||++........... .+|...|.+++|+|++++|+++
T Consensus 239 ~~~~-~--~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 239 DGKE-L--WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYS-LPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp SSCB-C--CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSEEEEE
T ss_pred Ccce-e--EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEe-eeccccccceeECCCCCeeEEE
Confidence 7654 2 23467899999999999876 7888999999999999876532112222 5789999999999999999999
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCc------ceEEEEECCCCCEEEEEc------------C
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS------WAFGVKWSPSGNTLAYVG------------H 224 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~sp~~~~l~~~~------------~ 224 (379)
+.|+.|++||+ ..+.+...+..|.. .+....|+|++.++++++ .
T Consensus 315 ~~D~~i~iwd~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 376 (435)
T 4e54_B 315 DQKSEIRVYSA------------------SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYE 376 (435)
T ss_dssp ESSSCEEEEES------------------SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTC
T ss_pred cCCCEEEEEEC------------------CCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecC
Confidence 99999999997 33444444433321 123445666666555543 3
Q ss_pred CCeEEEEECCCCCceeeeeeeecCCeeeE-EEecCCcEEEEEeCCCeEEEEecCCC
Q 016982 225 NSMIYFVDDVGPSPLAQNVAFRDLPLRDV-LFVSEKMVIGVGFDCNPMVFAADETG 279 (379)
Q Consensus 225 d~~i~v~d~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~d~~~~i~~~~~~~ 279 (379)
++.|++||..+++.+......|...|.++ +|+|+|++|+++.|+.|++|+..+.+
T Consensus 377 ~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk 432 (435)
T 4e54_B 377 LRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEAR 432 (435)
T ss_dssp CCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC---
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCe
Confidence 45799999988875534445677888887 69999999999999999999876543
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.6e-36 Score=260.25 Aligned_cols=253 Identities=15% Similarity=0.164 Sum_probs=208.4
Q ss_pred ceeccCcceeEEEeCC-CCcEEEEEecCCeEEEEEecCCce-----EEEEEeccCCCceEEEEEcCCC-CEEEEEeCCCe
Q 016982 5 AVHQFAQCITCHAWSP-DHAMVAFCPNNNEVHIYKLIQEKW-----EKLHVLQKHDQIVSGIDWSVRS-NRIVTVSHDRN 77 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~ 77 (379)
.+.+|.+.|++++|+| ++++|++|+.||.|++|++.++.. +.+..+.+|...|.+++|+|++ ++|++++.|+.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 4668999999999999 999999999999999999987632 4567788999999999999998 69999999999
Q ss_pred EEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcC-EEEEEEcCCC
Q 016982 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSS-VTSVAWHPNN 156 (379)
Q Consensus 78 i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~ 156 (379)
|++||+.+++....+....|...|.+++|+|++++|++++.|+.|++||++.+. ....+...|.+. +.++.|+|++
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT---VVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---EEEEEECSSCSSSCCEEEECSTT
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc---eeeeeccCCCCCcceEEEEcCCC
Confidence 999999998755444225688999999999999999999999999999998876 333432466655 8999999999
Q ss_pred cEEEEe---eCCCeEEEEeccccccccccccCCCccCCcccc-eEEEee-cCCcceEEEEECCCCCEEEE-EcCCCeEEE
Q 016982 157 VFLATT---STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE-QILQLD-LSFSWAFGVKWSPSGNTLAY-VGHNSMIYF 230 (379)
Q Consensus 157 ~~l~~~---~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~v~~~~~sp~~~~l~~-~~~d~~i~v 230 (379)
++|+++ +.|+.|++||+. ..+ .+.... .+...+.+++|+|++++|++ ++.|+.|++
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~------------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i 294 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTK------------------HLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRY 294 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETT------------------BCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEE
T ss_pred cEEEEeccCCCCceEEEEcCc------------------cccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEE
Confidence 999999 789999999972 222 122222 45677999999999999864 557999999
Q ss_pred EECCCCCceeeeeeee--cCCeeeEEEecCCcEEEEEeCCCeEEEEecCCC
Q 016982 231 VDDVGPSPLAQNVAFR--DLPLRDVLFVSEKMVIGVGFDCNPMVFAADETG 279 (379)
Q Consensus 231 ~d~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~ 279 (379)
||+.++++.+..+..+ ..++.+++|+|++.++++ .++.+++|......
T Consensus 295 ~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s-~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 295 FEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN-KCEIARFYKLHERK 344 (402)
T ss_dssp EEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG-GTEEEEEEEEETTE
T ss_pred EEecCCCcceEeecccccCCcccceEEeccccccee-cceeEEEEEcCCCc
Confidence 9999877544555544 488999999999998775 56689999988643
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-35 Score=256.28 Aligned_cols=242 Identities=15% Similarity=0.214 Sum_probs=206.0
Q ss_pred cCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC-c
Q 016982 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS-E 87 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-~ 87 (379)
|...|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+ +++|++++.|+.|++||+... .
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--TKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--eEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcc
Confidence 7889999999999999999999999999999887 6788889999999999994 679999999999999999843 3
Q ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC-cEEEEee--C
Q 016982 88 WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN-VFLATTS--T 164 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~--~ 164 (379)
... ....|...|.+++|+|++++|++++.|+.|++||++... ....+ ..|...|.+++|+|++ .++++++ .
T Consensus 209 ~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 209 QIG--TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI---PKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp EEE--EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS---EEEEE-CCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred eee--EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC---ccEEe-cCCcceEEEEEECCCCCCEEEEecCCC
Confidence 333 346799999999999999999999999999999998876 34455 6899999999999976 5666655 7
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEE--cCCCeEEEEECCCCCc-eee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYV--GHNSMIYFVDDVGPSP-LAQ 241 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~--~~d~~i~v~d~~~~~~-~~~ 241 (379)
|+.|++||+ .+++++..+. +...+.+++|+|++++++++ +.||.|++||+.++.. ...
T Consensus 283 d~~i~i~d~------------------~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 283 DKQIHFWNA------------------ATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TCEEEEEET------------------TTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEC------------------CCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 999999997 5677777775 46779999999999999984 4899999999987542 223
Q ss_pred eeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCC
Q 016982 242 NVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETG 279 (379)
Q Consensus 242 ~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~ 279 (379)
.+..|...|.+++|+|++++|+ ++.|+.+++|+.....
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 4567889999999999999888 6678899999987654
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=270.71 Aligned_cols=249 Identities=8% Similarity=0.022 Sum_probs=198.0
Q ss_pred eeccCcceeEEEeCCC------CcEEEEEecCCeEEEEEecCCce---------EEEEEeccCCCceEEEEEcCCCCEEE
Q 016982 6 VHQFAQCITCHAWSPD------HAMVAFCPNNNEVHIYKLIQEKW---------EKLHVLQKHDQIVSGIDWSVRSNRIV 70 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~------~~~l~~~~~dg~i~i~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~ 70 (379)
+.+|.+.|.+++|+|+ +.+||+++.||+|++||+.++.. .+...+.+|...|++++|+|++ .|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 4567889999999997 57999999999999999976521 1234678899999999999864 899
Q ss_pred EEeCCCeEEEEeccCCceeeeEEeecCCCceeEE--EECCCC-CEEEEEeCCCeEEEEEeecCCceeEEEEEeecCC--c
Q 016982 71 TVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCV--QWSPKE-NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHD--S 145 (379)
Q Consensus 71 ~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~--~ 145 (379)
+|+.||+|++||+.++.. +...+..|...|.++ .|+|++ .+|++++.|++|++||++.... ...+ .+|. .
T Consensus 282 sgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~---~~~~-~~~~~~~ 356 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT---TKTT-VSRFRGS 356 (524)
T ss_dssp EEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH---HCEE-EEECSCC
T ss_pred EEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc---cccc-ccccccC
Confidence 999999999999987642 223346799999999 578887 8999999999999999987653 2233 3443 3
Q ss_pred CEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC
Q 016982 146 SVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN 225 (379)
Q Consensus 146 ~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 225 (379)
.|.+++|+|+++.+++++.|++|++||+ +.+.++..+.+|...|++++|+|+|++|++|+.|
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~------------------~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPS------------------RAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEET------------------TCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEEC------------------cccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence 5789999999999999999999999997 5667777888999999999999999999999999
Q ss_pred CeEEEEECCCC-----C--------------------------------------ceeeeeeeecCCeeeEEEecCCc--
Q 016982 226 SMIYFVDDVGP-----S--------------------------------------PLAQNVAFRDLPLRDVLFVSEKM-- 260 (379)
Q Consensus 226 ~~i~v~d~~~~-----~--------------------------------------~~~~~~~~~~~~i~~~~~s~~~~-- 260 (379)
++|++||+... + .....+.+|..+|.+++|+|++.
T Consensus 419 gtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~ 498 (524)
T 2j04_B 419 GSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGG 498 (524)
T ss_dssp TEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTT
T ss_pred CEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCcc
Confidence 99999985321 0 01122345677899999999854
Q ss_pred -EEEEE-eCCCeEEEEecCC
Q 016982 261 -VIGVG-FDCNPMVFAADET 278 (379)
Q Consensus 261 -~l~~~-~d~~~~i~~~~~~ 278 (379)
++|+| .++.++||.+...
T Consensus 499 ~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 499 KCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TEEEEECTTSEEEEEECSCC
T ss_pred HHHHhhccCceEEEEEcccc
Confidence 88855 4589999987654
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=258.48 Aligned_cols=245 Identities=19% Similarity=0.235 Sum_probs=203.6
Q ss_pred eccCcceeEEEeCCC---CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEE------EcCCCCEEEEEeCCCe
Q 016982 7 HQFAQCITCHAWSPD---HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGID------WSVRSNRIVTVSHDRN 77 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~d~~ 77 (379)
.+|..+|++++|+|+ +++|++|+.||.|++||+.+++ ..+..+.+|...|.+++ |+|++++|++++.|+.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 478999999999998 6999999999999999999862 26777889999999995 5788999999999999
Q ss_pred EEEEeccCCc-eeeeEEeecCC----CceeEEE----ECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEE
Q 016982 78 SYVWNQEGSE-WVPTLVILRLN----RAALCVQ----WSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVT 148 (379)
Q Consensus 78 i~vw~~~~~~-~~~~~~~~~~~----~~v~~~~----~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~ 148 (379)
|++||+.+++ ....+ ..+. ..+.+++ |+|+++++++++.|+.|++||++... . ... ..|...|.
T Consensus 141 i~vwd~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---~-~~~-~~~~~~v~ 213 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANM--EPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA---L-RWE-TNIKNGVC 213 (357)
T ss_dssp EEEECTTSCSSCSEEE--CCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE---E-EEE-EECSSCEE
T ss_pred EEEEeCCCCCCcceec--cccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc---e-eee-cCCCCceE
Confidence 9999999876 33333 3333 3788888 78899999999999999999998876 2 233 57889999
Q ss_pred EEEEcC---CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEE-----EeecCCcceEEEEECCCCC-EE
Q 016982 149 SVAWHP---NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL-----QLDLSFSWAFGVKWSPSGN-TL 219 (379)
Q Consensus 149 ~~~~~p---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~sp~~~-~l 219 (379)
+++|+| ++++|++++.||.|++||+. .++.+. .+..|...|.+++|+|+++ +|
T Consensus 214 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 275 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLEGKFHVFDMR------------------TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELF 275 (357)
T ss_dssp EEEESCSSSSCCEEEEEESTTEEEEEEEE------------------EEETTTEEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred EEEcCCCCCCCCEEEEECCCCeEEEEeCc------------------CCCcccceeeeccCCCcCCEEEEEECCCCCcEE
Confidence 999999 89999999999999999973 222222 3448899999999999998 89
Q ss_pred EEEcCCCeEEEEECCCCC------------------ceeeeeeeecCCeeeEEEecCCcEEE--EEeCCCeEEEEecC
Q 016982 220 AYVGHNSMIYFVDDVGPS------------------PLAQNVAFRDLPLRDVLFVSEKMVIG--VGFDCNPMVFAADE 277 (379)
Q Consensus 220 ~~~~~d~~i~v~d~~~~~------------------~~~~~~~~~~~~i~~~~~s~~~~~l~--~~~d~~~~i~~~~~ 277 (379)
++++.||.|++||+.... ..+..+..|..+|.+++|+|++++|+ ++.|+.+++|+...
T Consensus 276 ~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 276 LTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 999999999999987543 23566778899999999999998775 56789999998764
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=248.95 Aligned_cols=267 Identities=12% Similarity=0.112 Sum_probs=217.9
Q ss_pred eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEE
Q 016982 44 WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVC 123 (379)
Q Consensus 44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 123 (379)
......+.+|...|++++|+|++++|++++.|+.|++||+.+++....+ ..|...|.+++|+|++++|++++.|+.|+
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL--DGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh--hhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 4566778999999999999999999999999999999999998865554 67999999999999999999999999999
Q ss_pred EEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC-----CeEEEEeccccccccccccCCCccCCcccceEE
Q 016982 124 ICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD-----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL 198 (379)
Q Consensus 124 i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
+||+.++. ....+ .+...+.+++|+|+++++++++.+ +.|++||+.......... ......+.
T Consensus 100 iwd~~~~~---~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~-------~~~~~~~~ 167 (369)
T 3zwl_B 100 LWDVSNGQ---CVATW--KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT-------KVSEEPIH 167 (369)
T ss_dssp EEETTTCC---EEEEE--ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE-------EECSSCSE
T ss_pred EEECCCCc---EEEEe--ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec-------ccccceee
Confidence 99998887 44554 388899999999999999999998 999999984221110000 01123344
Q ss_pred EeecCCc--ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEe
Q 016982 199 QLDLSFS--WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAA 275 (379)
Q Consensus 199 ~~~~~~~--~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~ 275 (379)
.+..|.. .+.+++|+|++++|++++.||.|++||+.+.......+..|...|.+++|+|++++|+ ++.|+.+++|+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 5555655 8999999999999999999999999999986556788888999999999999999887 567889999997
Q ss_pred cCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEE
Q 016982 276 DETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFT 355 (379)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~ 355 (379)
......... .|...+.+++ +++++ ++++
T Consensus 248 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~-~~~~~----~~l~ 275 (369)
T 3zwl_B 248 STLQVLKKY-----------------------------------------------ETDCPLNTAV-ITPLK----EFII 275 (369)
T ss_dssp TTCCEEEEE-----------------------------------------------ECSSCEEEEE-ECSSS----SEEE
T ss_pred CCCceeeee-----------------------------------------------cCCCCceeEE-ecCCC----ceEE
Confidence 764422211 2566788898 76665 8999
Q ss_pred EeecCc--------------eEEEEeCCCcccccc
Q 016982 356 TSGLDG--------------KIVTWDLESQEDLLN 376 (379)
Q Consensus 356 t~~~Dg--------------~v~iW~~~~~~~~~~ 376 (379)
+++.++ .+++||+.+++.+..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 276 LGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp EEECCC-------------CEEEEEETTTCCEEEE
T ss_pred EeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 999988 899999988776654
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-35 Score=246.04 Aligned_cols=253 Identities=15% Similarity=0.161 Sum_probs=213.3
Q ss_pred eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEE
Q 016982 44 WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVC 123 (379)
Q Consensus 44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 123 (379)
.+....+.+|.+.|++++| |++++|++++.||.|++||+.+++....+ ..|...|.+++|+|+++++++++.|+.++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVV--YTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEE--EECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEe--ecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 4788899999999999999 99999999999999999999888755544 56899999999999999999999999999
Q ss_pred EEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 124 ICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 124 i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
+|++...........+ ..|...|.+++| +++++++++.|+.|++||. .+.+..+..|
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~--------------------~~~~~~~~~~ 141 (313)
T 3odt_A 85 GVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE--------------------GSLVYNLQAH 141 (313)
T ss_dssp EEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEET--------------------TEEEEEEECC
T ss_pred EEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC--------------------CcEEEecccC
Confidence 9998766433334455 789999999999 5789999999999999974 5667778889
Q ss_pred CcceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCceeeeeee-ecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcE
Q 016982 204 FSWAFGVKWSP-SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF-RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIW 281 (379)
Q Consensus 204 ~~~v~~~~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~ 281 (379)
...+.+++|+| +++++++++.|+.|++||... ....+.. |...+.+++|+|++.+++++.|+.+++|+.......
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTASADKTIKLWQNDK---VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCceeEEEEccCCCCEEEEEECCCCEEEEecCc---eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 99999999998 999999999999999999332 3355555 788999999999999777889999999998754322
Q ss_pred EEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCc
Q 016982 282 TFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg 361 (379)
. .+.+|...|++++ +++++ .|++++.||
T Consensus 219 ~----------------------------------------------~~~~~~~~i~~~~-~~~~~-----~l~~~~~dg 246 (313)
T 3odt_A 219 R----------------------------------------------TYEGHESFVYCIK-LLPNG-----DIVSCGEDR 246 (313)
T ss_dssp E----------------------------------------------EEECCSSCEEEEE-ECTTS-----CEEEEETTS
T ss_pred h----------------------------------------------hhhcCCceEEEEE-EecCC-----CEEEEecCC
Confidence 1 1246889999999 76654 599999999
Q ss_pred eEEEEeCCCccccccC
Q 016982 362 KIVTWDLESQEDLLNY 377 (379)
Q Consensus 362 ~v~iW~~~~~~~~~~~ 377 (379)
.|++||+.+++.++.+
T Consensus 247 ~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 247 TVRIWSKENGSLKQVI 262 (313)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCceeEEE
Confidence 9999999998776543
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=253.82 Aligned_cols=236 Identities=11% Similarity=0.066 Sum_probs=184.2
Q ss_pred EeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc---------CCc
Q 016982 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE---------GSE 87 (379)
Q Consensus 17 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~---------~~~ 87 (379)
.+.+++++|++|+.||.|++||+.++ +.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~--~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDS--KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSS--SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCC--cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 44568889999999999999999987 3444444 457888899988 9999999999999765 344
Q ss_pred eeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC
Q 016982 88 WVPTLVILRLNRAALCVQWSP--KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 165 (379)
...... ..|...|.+++|+| +++++++++.|+.|++||++++.. .......+...+.+++|+|++++|++|+.|
T Consensus 116 ~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 116 VLREIE-VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp EEEEEE-CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred eeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 333332 35668899999999 999999999999999999998873 333324566689999999999999999999
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceE-EEeec-CCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI-LQLDL-SFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 243 (379)
|.|++||+ ++++.+ ..+.. |..+|.+++|+|++.+|++++ ++.|++||+++.... ..+
T Consensus 192 g~i~iwd~------------------~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~-~~~ 251 (343)
T 3lrv_A 192 GILDVYNL------------------SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT-LAY 251 (343)
T ss_dssp SCEEEEES------------------SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC-BSS
T ss_pred CEEEEEEC------------------CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc-eee
Confidence 99999997 555655 67777 999999999999999999999 559999999987643 333
Q ss_pred e---eecCCee--eEEEecCCcEEEE-Ee-CCCeEEEEecCC-CcEEE
Q 016982 244 A---FRDLPLR--DVLFVSEKMVIGV-GF-DCNPMVFAADET-GIWTF 283 (379)
Q Consensus 244 ~---~~~~~i~--~~~~s~~~~~l~~-~~-d~~~~i~~~~~~-~~~~~ 283 (379)
. .|..++. +++|+|+|++|++ +. |+.+++|+.... ..|..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 252 PTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp CCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred cccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 2 2444444 5999999999986 33 889999998643 34553
No 103
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.8e-37 Score=264.65 Aligned_cols=251 Identities=14% Similarity=0.150 Sum_probs=194.8
Q ss_pred ccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecC
Q 016982 51 QKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQE 130 (379)
Q Consensus 51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~ 130 (379)
..+..+|++++|+|++++|++++.|+.|++||+.++.......+..|...|.+++|+|++++|++++.|+.|++||+..+
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 34667999999999999999999999999999998843333444679999999999999999999999999999999886
Q ss_pred CceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccc---eEEEeec-CCcc
Q 016982 131 NNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE---QILQLDL-SFSW 206 (379)
Q Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~ 206 (379)
........+ ..|...|.+++|+|++++|++++.|+.|++||+ ..++ ....+.. |...
T Consensus 88 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~------------------~~~~~~~~~~~~~~~h~~~ 148 (377)
T 3dwl_C 88 GTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYF------------------EQENDWWVSKHLKRPLRST 148 (377)
T ss_dssp -CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----------------------CCCCEEECSSCCSC
T ss_pred CceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEE------------------CCcccceeeeEeecccCCC
Confidence 522123334 689999999999999999999999999999997 3333 3566766 8999
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCC-----------------CceeeeeeeecCCeeeEEEecCCcEEE-EEeCC
Q 016982 207 AFGVKWSPSGNTLAYVGHNSMIYFVDDVGP-----------------SPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDC 268 (379)
Q Consensus 207 v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~-----------------~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~ 268 (379)
|.+++|+|++++|++++.|+.|++||+... ..+...+ .|...|.+++|+|++++|+ ++.|+
T Consensus 149 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 149 ILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp EEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC
Confidence 999999999999999999999999998532 1233444 7889999999999999777 66788
Q ss_pred CeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCC
Q 016982 269 NPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGS 348 (379)
Q Consensus 269 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 348 (379)
.+++|+.......... .. .+.+|...|++++ |++++
T Consensus 228 ~i~iwd~~~~~~~~~~----------------------~~--------------------~~~~~~~~v~~~~-~s~~~- 263 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRA----------------------LI--------------------TVKLSQLPLRSLL-WANES- 263 (377)
T ss_dssp EEC-CEECSTTSCEEE----------------------CC--------------------CEECSSSCEEEEE-EEETT-
T ss_pred cEEEEECCCCCCccee----------------------eE--------------------eecCCCCceEEEE-EcCCC-
Confidence 9999987754320000 00 2357999999999 77766
Q ss_pred cccceEEEeecCceEEEEeCC
Q 016982 349 SRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 349 ~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
++|++|+.|+.+ +|+..
T Consensus 264 ---~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 264 ---AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ---EEEEEESSSSEE-EECCC
T ss_pred ---CEEEEEcCCcEE-EEEeC
Confidence 899999877766 66554
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=259.45 Aligned_cols=253 Identities=11% Similarity=0.133 Sum_probs=195.8
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCce---------eeeEEeecCC------------CceeEEEECCCC-
Q 016982 53 HDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW---------VPTLVILRLN------------RAALCVQWSPKE- 110 (379)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~---------~~~~~~~~~~------------~~v~~~~~~~~~- 110 (379)
+.+.|++++|+|++++|++|+.||.|++||+.+++. .....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 578999999999999999999999999999987651 1123346787 889999999998
Q ss_pred -CEEEEEeCCCeEEEEEeecCCce------------------------------------eEEEEEeecCCcCEEEEEEc
Q 016982 111 -NKFAVGSGAKTVCICYYEQENNW------------------------------------WVSKLIRKRHDSSVTSVAWH 153 (379)
Q Consensus 111 -~~l~~~~~d~~v~i~~~~~~~~~------------------------------------~~~~~~~~~~~~~v~~~~~~ 153 (379)
..|++++.|+.|++|++...... ...+.+..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999999864310 00112225799999999999
Q ss_pred CCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEE-------EeecCCcceEEEEECCCC-CEEEEEcCC
Q 016982 154 PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL-------QLDLSFSWAFGVKWSPSG-NTLAYVGHN 225 (379)
Q Consensus 154 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~sp~~-~~l~~~~~d 225 (379)
|++++|+++ .|+.|++||+. .....+. .+..|...|.+++|+|++ ++|++++.|
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~-----------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLE-----------------ITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETT-----------------EEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCEEEEe-CCCeEEEEECC-----------------CCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC
Confidence 999999998 79999999972 1233333 356788999999999998 999999999
Q ss_pred CeEEEEECCCCCce---eeeeeeecC------------CeeeEEEecCCcEEEEEeCCCeEEEEecC-CCcEEEEEEecc
Q 016982 226 SMIYFVDDVGPSPL---AQNVAFRDL------------PLRDVLFVSEKMVIGVGFDCNPMVFAADE-TGIWTFIKFLDE 289 (379)
Q Consensus 226 ~~i~v~d~~~~~~~---~~~~~~~~~------------~i~~~~~s~~~~~l~~~~d~~~~i~~~~~-~~~~~~~~~~~~ 289 (379)
|.|++||++++... ...+..|.. .|.+++|+|+|++|+++.++.+++|+... ......
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~------ 322 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVET------ 322 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCC------
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccce------
Confidence 99999999887641 366666665 89999999999999977779999999764 221111
Q ss_pred cccCCCCCccCCCcccccceeeccccccCccccccccccccccccc------------c---eeeeeeecccCCcccceE
Q 016982 290 RKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVN------------C---INCIVPLREAGSSRITRF 354 (379)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------~---v~~~~~~~~~~~~~~~~l 354 (379)
+.+|.. . +..++ |++++ ++|
T Consensus 323 ----------------------------------------~~~~~~~~~~l~~~~~~~~i~~~~~~~-~s~~~----~~l 357 (447)
T 3dw8_B 323 ----------------------------------------YQVHEYLRSKLCSLYENDCIFDKFECC-WNGSD----SVV 357 (447)
T ss_dssp ----------------------------------------EESCGGGTTTHHHHHHTSGGGCCCCEE-ECTTS----SEE
T ss_pred ----------------------------------------eeccccccccccccccccccccceEEE-ECCCC----CEE
Confidence 122321 1 33477 77665 899
Q ss_pred EEeecCceEEEEeCCCcccc
Q 016982 355 TTSGLDGKIVTWDLESQEDL 374 (379)
Q Consensus 355 ~t~~~Dg~v~iW~~~~~~~~ 374 (379)
++|+.||.|++||+.+++.+
T Consensus 358 ~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 358 MTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp EEECSTTEEEEEETTTCCEE
T ss_pred EEeccCCEEEEEEcCCCcce
Confidence 99999999999999987654
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-34 Score=253.31 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=209.1
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++|+|+|+|++||+|+.||.|+|||+.++ +.+..+.+|...+.+++++ +..|++++.|+.+++||..
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETT
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeec
Confidence 34578889999999999999999999999999999987 7888999999999998875 6799999999999999988
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCcee-EEEEEeecCCcCEEEEEEcCCC-cEEEE-
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW-VSKLIRKRHDSSVTSVAWHPNN-VFLAT- 161 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~-~~l~~- 161 (379)
..... ...+..|...+..+.|+|+++++++++.|+.+++|+...+.... ..... ..|...|.+++|+|++ ..+++
T Consensus 218 ~~~~~-~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~-~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 218 VAEHH-VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF-TQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp SSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEE-CCCSSCEEEEEECTTCTTEEEEE
T ss_pred cccee-eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeee-cccCCceeeeeeCCCcccEEEEE
Confidence 75432 23346799999999999999999999999999999998765321 12333 6889999999999976 55554
Q ss_pred -eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc--CCCeEEEEECCCCCc
Q 016982 162 -TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG--HNSMIYFVDDVGPSP 238 (379)
Q Consensus 162 -~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~i~v~d~~~~~~ 238 (379)
|+.|+.|++||+ .+++++..+..+ ..+.++.|+|+++.+++++ .|+.|++||+.+++
T Consensus 296 ~gs~D~~I~iwd~------------------~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~- 355 (420)
T 4gga_A 296 GGTSDRHIRIWNV------------------CSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA- 355 (420)
T ss_dssp ECTTTCEEEEEET------------------TTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-
T ss_pred eecCCCEEEEEeC------------------Cccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc-
Confidence 457999999997 677777777664 5688999999999988765 78999999998876
Q ss_pred eeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecC
Q 016982 239 LAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 239 ~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~ 277 (379)
++..+.+|...|++++|+|+|++|+ ++.|+.|++|+..+
T Consensus 356 ~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 356 KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 4588899999999999999999887 67889999998754
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-35 Score=275.71 Aligned_cols=261 Identities=17% Similarity=0.191 Sum_probs=209.3
Q ss_pred EEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCeEEEE
Q 016982 48 HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK--ENKFAVGSGAKTVCIC 125 (379)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~ 125 (379)
..+.+|.+.|++++|+|++++|++++.||.|++||+.++..........|...|.+++|+|+ +++|++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 46789999999999999999999999999999999986654455556789999999999988 9999999999999999
Q ss_pred EeecCCceeEEEEEeecCCcCEEEEEEcCC--CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 126 YYEQENNWWVSKLIRKRHDSSVTSVAWHPN--NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
|+.++... ....+ ..|...|.+++|+|+ ++++++++.||.|++||+.. ........+..|
T Consensus 83 d~~~~~~~-~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~----------------~~~~~~~~~~~~ 144 (753)
T 3jro_A 83 KEENGRWS-QIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE----------------NGTTSPIIIDAH 144 (753)
T ss_dssp EEETTEEE-EEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCS----------------SSCCCCEEEECC
T ss_pred ECCCCccc-ccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeec----------------CCCcceeEeecC
Confidence 99987521 23334 689999999999999 99999999999999999721 112334556788
Q ss_pred CcceEEEEECC-------------CCCEEEEEcCCCeEEEEECCCCC---ceeeeeeeecCCeeeEEEecC---CcEEE-
Q 016982 204 FSWAFGVKWSP-------------SGNTLAYVGHNSMIYFVDDVGPS---PLAQNVAFRDLPLRDVLFVSE---KMVIG- 263 (379)
Q Consensus 204 ~~~v~~~~~sp-------------~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~~i~~~~~s~~---~~~l~- 263 (379)
...|.+++|+| ++.+|++++.||.|++||++++. .....+..|..+|.+++|+|+ +++++
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 89999999999 58999999999999999998764 244566788999999999999 88877
Q ss_pred EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeee
Q 016982 264 VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPL 343 (379)
Q Consensus 264 ~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 343 (379)
++.|+.+++|+......... ... ....+|...|++++ |
T Consensus 225 ~s~Dg~I~iwd~~~~~~~~~------------------------~~~-----------------~~~~~~~~~v~~l~-~ 262 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQGPWK------------------------KTL-----------------LKEEKFPDVLWRAS-W 262 (753)
T ss_dssp EESSSCEEEEEESSSSSCCB------------------------CCB-----------------SSSSCCSSCCCCEE-E
T ss_pred EecCCEEEEecCCCCCCcce------------------------eEE-----------------eccCCCCCceEEEE-E
Confidence 66788999998765321000 000 02246888999999 7
Q ss_pred cccCCcccceEEEeecCceEEEEeCCCcc
Q 016982 344 REAGSSRITRFTTSGLDGKIVTWDLESQE 372 (379)
Q Consensus 344 ~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~ 372 (379)
++++ ++|++|+.||.|++|++.++.
T Consensus 263 spdg----~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 263 SLSG----NVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CTTT----CCEEEECSSSCEECCBCCSSS
T ss_pred cCCC----CEEEEEcCCCEEEEEecCCCC
Confidence 7665 899999999999999998643
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.4e-35 Score=249.07 Aligned_cols=271 Identities=15% Similarity=0.121 Sum_probs=206.4
Q ss_pred EEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCc-eeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEE
Q 016982 47 LHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSE-WVPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCI 124 (379)
Q Consensus 47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i 124 (379)
.....+|.+.|.+++|+|++++|++++.|+.|++|++.+++ .........|...|.+++|+|+++ +|++++.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 44456899999999999999999999999999999998876 111223357899999999999999 9999999999999
Q ss_pred EEe-ecCCceeEEEEEeec--CCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee
Q 016982 125 CYY-EQENNWWVSKLIRKR--HDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD 201 (379)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (379)
||+ .... ...+ .. |...|.+++|+| +++|++++.|+.|++||+........ ....+++..+.
T Consensus 84 wd~~~~~~----~~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~ 148 (342)
T 1yfq_A 84 VDLIGSPS----FQAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI---------AVKNLNSNNTK 148 (342)
T ss_dssp ECSSSSSS----EEEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE---------EEEESCSSSSS
T ss_pred EEeccCCc----eEec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc---------cccCCeeeEEe
Confidence 999 7775 2444 67 999999999999 99999999999999999721000000 00033444444
Q ss_pred cCCcceEEEEECCCCCEEEEEcCCCeEEEEECCC-CCc-eeeeeeeecCCeeeEEEec-CCcEEE-EEeCCCeEEEEecC
Q 016982 202 LSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG-PSP-LAQNVAFRDLPLRDVLFVS-EKMVIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 202 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~-~~~-~~~~~~~~~~~i~~~~~s~-~~~~l~-~~~d~~~~i~~~~~ 277 (379)
|...+.+++|+|++ +++++.|+.|++||+++ ... .......+...+.+++|+| ++++++ ++.|+.+.+|+.+.
T Consensus 149 -~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp -SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred -eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 67889999999988 88899999999999987 543 2233445778899999999 998877 66788999998765
Q ss_pred C------CcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCccc
Q 016982 278 T------GIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRI 351 (379)
Q Consensus 278 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 351 (379)
. ............ . .-.+|...|++++ |++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~---~----------------------------------~~~~~~~~i~~~~-~s~~~---- 263 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRCHRLN---L----------------------------------KDTNLAYPVNSIE-FSPRH---- 263 (342)
T ss_dssp TCCSTTCTTCEEEECCCCC---T----------------------------------TCCSSCCCEEEEE-ECTTT----
T ss_pred CCcccccccceeeeccccc---c----------------------------------cccccceeEEEEE-EcCCC----
Confidence 4 111111100000 0 0024667999999 76665
Q ss_pred ceEEEeecCceEEEEeCCCccccccC
Q 016982 352 TRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 352 ~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
++|++++.||.|++||+.+++.+..+
T Consensus 264 ~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 264 KFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp CCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred CEEEEecCCceEEEEcCccHhHhhhh
Confidence 89999999999999999998877654
No 108
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-34 Score=247.98 Aligned_cols=317 Identities=9% Similarity=0.028 Sum_probs=210.2
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEE-EEEeCCCeEEEEecc
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRI-VTVSHDRNSYVWNQE 84 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~ 84 (379)
...|.+.|++++|+|||++||+|+.+ .+++|++.+. +....... ..+..+++.++++.+ ++++.|++|++||+.
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPV--AHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSS-EEEEEEETTE--EEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCc--ceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 36689999999999999999999876 5789999875 33333322 247788899888877 567778999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecC-CceeEEEEEeecCCcCEEEEEEcCCCcEEEE--
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQE-NNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT-- 161 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~-- 161 (379)
+++.+..+ .+...|.+++|+++. ++++ .++.|++||+... +. ...+ .. +...+++++ .++++
T Consensus 90 ~~~~~~~~---~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~---~~~~-~~---~~~~~~~s~--~~la~~s 154 (355)
T 3vu4_A 90 KKQDVSRI---KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR---ITDD-IR---FGGVCEFSN--GLLVYSN 154 (355)
T ss_dssp TTEEEEEE---ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB---SSCC-EE---EEEEEEEET--TEEEEEE
T ss_pred CCcEEEEE---ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee---eEEe-cc---CCceEEEEc--cEEEEeC
Confidence 99866654 367799999999764 4444 3789999999877 32 2222 11 344566676 56665
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccce-EEEeecCCcceEEEEECCCCCEEEEEcCCCe-EEEEECCCCCce
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ-ILQLDLSFSWAFGVKWSPSGNTLAYVGHNSM-IYFVDDVGPSPL 239 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-i~v~d~~~~~~~ 239 (379)
|+.+|.|++||+............ .......+ +..+.+|...|.+++|+|+|++|++++.|++ |++||+++++.
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~---~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~- 230 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQG---VQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL- 230 (355)
T ss_dssp SSCTTCEEEEECCC---------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE-
T ss_pred CCcCcEEEEEECCCCCcccccccc---ccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE-
Confidence 688999999997321100000000 00000112 6778899999999999999999999999998 99999998774
Q ss_pred eeeee-e-ecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccc
Q 016982 240 AQNVA-F-RDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKY 316 (379)
Q Consensus 240 ~~~~~-~-~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (379)
+..+. + |..+|.+++|+|+|++|+ ++.|+.+++|+......-+. ..+.....+ ....... .+..+.
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~-~~~~~~~~~---~~~~~~~--~~~~~~----- 299 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKR-HALKGWINM---KYFQSEW--SLCNFK----- 299 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCS-EETTTTEEC---CCCCCSS--CSEEEE-----
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccc-ccccceeec---ccccccc--ceeEEE-----
Confidence 46666 4 889999999999999888 66788999999865321000 000000000 0000000 000000
Q ss_pred cCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCcccc
Q 016982 317 GVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDL 374 (379)
Q Consensus 317 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~ 374 (379)
....+......++ |++++ .+|++++.||.+++|++..++..
T Consensus 300 ------------~~~~~~~~~~~~a-~~~d~----~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 300 ------------LSVDKHVRGCKIA-WISES----SLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp ------------CCCCTTCCCCEEE-ESSSS----EEEEEETTTTEEEEEEEEEETTT
T ss_pred ------------eccCCCCCceEEE-EeCCC----CEEEEEeCCCeEEEEEEEcCCCC
Confidence 1112233345567 77666 89999999999999999875543
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.5e-35 Score=250.20 Aligned_cols=206 Identities=11% Similarity=0.006 Sum_probs=172.4
Q ss_pred cCcceeEEEeCCCCcEEEEE--ecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 9 FAQCITCHAWSPDHAMVAFC--PNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
+...+.+++|||||+++|++ +.|+.|+|||+.+. +.+..+. |...|.+++|+|+|++|++++.+ .+.+|+..++
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~--~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~ 207 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL--TEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTG 207 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT--EEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTC
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC--cEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccC
Confidence 44568899999999998755 46899999999987 6666665 77889999999999999998865 5677777777
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC----eEEEEEeecCCceeE-EEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK----TVCICYYEQENNWWV-SKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~i~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
+.........|...+.+++|+|+++.+++++.|+ .+++|++........ ...+ ..|...|++++|+|++++||+
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV-TNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE-ESSCSCEEEEEECTTSCEEEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee-cCCCCCeEeEEECCCCCceEE
Confidence 6555544466888999999999999999999877 577888876653222 2233 688999999999999999999
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS 237 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~ 237 (379)
|+.|+.|+|||+ .+++++..+ .+|...|++++|+|||++|++++.|++|+|||+....
T Consensus 287 gs~D~~V~iwd~------------------~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 287 ASNDNSIALVKL------------------KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EETTSCEEEEET------------------TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EcCCCEEEEEEC------------------CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 999999999997 678888875 7899999999999999999999999999999997643
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.7e-34 Score=251.08 Aligned_cols=261 Identities=13% Similarity=0.111 Sum_probs=181.0
Q ss_pred eeEEEeCCCCcEEEEEecCCeEEEEEecCCceE---EEEEeccCCCceEEEEEcC--------CCCEEEEEeCCCeEEEE
Q 016982 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWE---KLHVLQKHDQIVSGIDWSV--------RSNRIVTVSHDRNSYVW 81 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~---~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~vw 81 (379)
+....+++++.+||+++.|++|+|||..+++.. .+..+.+|.+.|++++|+| ++++|++++.|++|+||
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 333444456678999999999999999987432 3345789999999999998 78999999999999999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCeEEEEEeecCCceeEEE---------------------EE
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPKE-NKFAVGSGAKTVCICYYEQENNWWVSK---------------------LI 139 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~---------------------~~ 139 (379)
|+.++..... ...|..++.+++|+|++ ++|++++.|+.|++||+.++....... ..
T Consensus 172 d~~~~~~~~~--~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 249 (393)
T 4gq1_A 172 RLTDEGPILA--GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH 249 (393)
T ss_dssp EEETTEEEEE--EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred ECCCCceeee--ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee
Confidence 9988874443 36788999999999987 489999999999999998764210000 00
Q ss_pred eecCCcCEEEEEEc-CCCcEEEEeeCCCeEEEEeccccccccccccC-CCccCCcccceEEEeecCCcceEEEEECC--C
Q 016982 140 RKRHDSSVTSVAWH-PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKE-GTSSDTKFGEQILQLDLSFSWAFGVKWSP--S 215 (379)
Q Consensus 140 ~~~~~~~v~~~~~~-p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~ 215 (379)
..+|...+.++.|+ |+++.|++++.|+.+++||+............ .................+...+ ...|+| +
T Consensus 250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 328 (393)
T 4gq1_A 250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL-GACPHPRYM 328 (393)
T ss_dssp --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS-CCEECSSCT
T ss_pred cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce-eEEEccCCC
Confidence 13577788899987 79999999999999999997421110000000 0000000001111122222222 233444 4
Q ss_pred CCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 216 GNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 216 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
+.++++++.||.|++||+.++... .....|..+|.+++|+|||++||+++++.+.+|.+.+
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~~~-~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKDSN-SIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTTCC-EEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred CEEEEEECCCCEEEEEECCCCcEE-EEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence 456778889999999999887754 5566788899999999999999999999998887543
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-33 Score=245.25 Aligned_cols=250 Identities=11% Similarity=0.061 Sum_probs=200.9
Q ss_pred ccCcceeEEEeCCCCcEE-EEEecCCeEEEEEec--CCceEEEEEec--cCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 8 QFAQCITCHAWSPDHAMV-AFCPNNNEVHIYKLI--QEKWEKLHVLQ--KHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 8 ~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~--~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
.|.+.|++++|+|++++| ++|+.||.|++||+. ++ +.+..+. .|...|.+++|+|++++|++++.++.+++|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 566789999999999996 889999999999998 65 4445554 5678999999999999999999999999999
Q ss_pred ccCCceee--eEEeecCCCceeEEEECCC---CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc
Q 016982 83 QEGSEWVP--TLVILRLNRAALCVQWSPK---ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 83 ~~~~~~~~--~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
+.+++... ...+..|...|.+++|+|+ +++|++++.|+.|++||+..+.. ...+..+|...|.+++|+ +++
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI---VDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC---EEEECCCCSSCEEEEEEC-STT
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce---eeeeecCCCCceEEEEEC-CCC
Confidence 98876432 1133568899999999999 99999999999999999988763 334326899999999999 999
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-------------------------cCCcceEEEEE
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-------------------------LSFSWAFGVKW 212 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~v~~~~~ 212 (379)
+|++++.|+.|++||+ .+++++..+. .....|..++|
T Consensus 254 ~l~s~~~d~~v~vwd~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDW------------------KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp EEEEEESSSEEEEEET------------------TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEEC------------------CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 9999999999999997 4455555443 22356899999
Q ss_pred CCCCCEEEEEc-CCCeEEEEEC--CCCC--ceeeeeeeecCCeeeEEEecCCcEEEEEe-------CCCeEEEEecC-CC
Q 016982 213 SPSGNTLAYVG-HNSMIYFVDD--VGPS--PLAQNVAFRDLPLRDVLFVSEKMVIGVGF-------DCNPMVFAADE-TG 279 (379)
Q Consensus 213 sp~~~~l~~~~-~d~~i~v~d~--~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------d~~~~i~~~~~-~~ 279 (379)
+|++++|++++ .++.|++|++ .... ..+..+..+ ..+.+++|+|++.+++++. +..+.+|..+. .+
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNEN 394 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTT
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCC
Confidence 99999999988 8999999999 4432 344556665 7899999999655555443 44578998775 34
Q ss_pred cEE
Q 016982 280 IWT 282 (379)
Q Consensus 280 ~~~ 282 (379)
.|.
T Consensus 395 ~~~ 397 (450)
T 2vdu_B 395 SFV 397 (450)
T ss_dssp EEE
T ss_pred eEE
Confidence 454
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-35 Score=254.93 Aligned_cols=221 Identities=12% Similarity=0.054 Sum_probs=178.8
Q ss_pred ccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCC-----ceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 8 QFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQ-----IVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 8 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
+|.+.|++++|||+|.+||+++.||.|++|+.++ .+..+. |.. .|.+++|||+|++|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 5578999999999999999999999999999543 666667 665 499999999999999999999999999
Q ss_pred ccCCce-------eeeEE--eecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEc
Q 016982 83 QEGSEW-------VPTLV--ILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWH 153 (379)
Q Consensus 83 ~~~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 153 (379)
+.++.. ...+. ..+|...|.+++|+|+| +++++.|+.+++|++..+........+...|...|.+++|+
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 998753 22221 14567899999999999 88888999999999988763111233424788999999999
Q ss_pred CCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEE--CCCCCEEEEEcCCCeEEEE
Q 016982 154 PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKW--SPSGNTLAYVGHNSMIYFV 231 (379)
Q Consensus 154 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~~d~~i~v~ 231 (379)
++.|++++ ++.|++||+ ..++......+|...+..++| +|++..|++++.+|. ++|
T Consensus 236 --g~~LASa~-~~tIkLWd~------------------~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDL------------------KNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp --TTEEEEEC-SSEEEEEET------------------TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEE
T ss_pred --CCEEEEEe-CCeEEEEEC------------------CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEE
Confidence 68888887 699999996 334442333379999999999 999999999999999 999
Q ss_pred ECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEe
Q 016982 232 DDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAA 275 (379)
Q Consensus 232 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~ 275 (379)
... .++++||+.++++. |+.+++|+.
T Consensus 294 ~~d-----------------~~~~spd~~l~a~~-d~~v~lW~~ 319 (588)
T 2j04_A 294 LED-----------------ELHVTADNIIAPYL-EKKFKKWST 319 (588)
T ss_dssp ESS-----------------SEEEECCCSSHHHH-HHHHHHTTT
T ss_pred eec-----------------cEEECCCceEEEEc-CCEEEEEEC
Confidence 866 25688888887764 778877764
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=231.99 Aligned_cols=248 Identities=15% Similarity=0.228 Sum_probs=203.5
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++|+|++++||+|+.||.|++|++.++ +.+..+.+|...+.++.+ ++..+++++.++.+++|+..
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~ 137 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVR 137 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecC
Confidence 34578889999999999999999999999999999988 788889999988877655 46799999999999999988
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc-E--EEE
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV-F--LAT 161 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~--l~~ 161 (379)
..... ......|...+..+.++++++++++++.|+.|++||+.+++...........+...|.+++++|++. . +++
T Consensus 138 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 138 VAEHH-VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp SSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred CCcee-EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 76532 2334678999999999999999999999999999999876532111222267888999999999764 3 346
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc--CCCeEEEEECCCCCce
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG--HNSMIYFVDDVGPSPL 239 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~i~v~d~~~~~~~ 239 (379)
++.++.|++||. ........ ..+...+..+.|+|++..+++++ .|+.|++||+.+++ +
T Consensus 217 ~~~~~~i~lwd~------------------~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-~ 276 (318)
T 4ggc_A 217 GTSDRHIRIWNV------------------CSGACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-K 276 (318)
T ss_dssp CTTTCEEEEEET------------------TTCCEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-E
T ss_pred cCCCCEEEEEec------------------cccccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc-E
Confidence 678999999996 33444333 34567799999999999887654 78999999999876 5
Q ss_pred eeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecC
Q 016982 240 AQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADE 277 (379)
Q Consensus 240 ~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~ 277 (379)
+..+.+|..+|++++|+|+|++|+ ++.|+.+++|+..+
T Consensus 277 ~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 277 VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 588899999999999999999887 67889999998654
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.9e-32 Score=241.83 Aligned_cols=279 Identities=8% Similarity=0.004 Sum_probs=216.3
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEE-----EeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLH-----VLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
...+.+++|+|++.++++++.++.|++||+.++ +... .+.+|...|.+++|+|+++++++++.|+.|++||+.
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG--QTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTC--CEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCC--eEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 455779999998788888888999999999987 3444 455788899999999999999999999999999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
+++....+ ..+...+.+++|+|+++.+++++ .|+.|++||++++. ....+ .....+.+++|+|+++++++++
T Consensus 200 ~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~---~~~~~--~~~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 200 TLAYKATV--DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL---EIRKT--DKIGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp TCCEEEEE--ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE---EEEEC--CCCSEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEE--cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc---EEEEe--cCCCCceEEEEcCCCCEEEEEE
Confidence 98866555 46788999999999999886554 79999999998775 33443 3345689999999999998887
Q ss_pred --------CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEE-EEEcCCCeEEEEECC
Q 016982 164 --------TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTL-AYVGHNSMIYFVDDV 234 (379)
Q Consensus 164 --------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~v~d~~ 234 (379)
.|+.|++||+ .+++.+..+ .+...+.+++|+|+++.+ ++++.++.|++||+.
T Consensus 273 ~~~~~~~~~dg~i~~~d~------------------~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSM------------------DKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp EESCTTCSCCEEEEEEET------------------TTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred CCCCccccCCCeEEEEEC------------------CCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 4889999997 445554444 344578899999999755 566899999999998
Q ss_pred CCCceeeeeeeecCCeeeEEEecCCcEEEEEe----------------CCCeEEEEecCCCcEEEEEEecccccCCCCCc
Q 016982 235 GPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGF----------------DCNPMVFAADETGIWTFIKFLDERKTSSSGPK 298 (379)
Q Consensus 235 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------------d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
+++ ....+. +...+.+++|+|+|++++++. |+.+++|+..... ....+
T Consensus 334 ~~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~---~~~~~----------- 397 (433)
T 3bws_A 334 EKK-VQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT---VKEFW----------- 397 (433)
T ss_dssp TTE-EEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE---EEEEE-----------
T ss_pred CCc-EEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc---EEEEe-----------
Confidence 765 334544 667899999999999777443 3478888865432 11111
Q ss_pred cCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEee-cCceEEEEeCCC
Q 016982 299 YGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG-LDGKIVTWDLES 370 (379)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~-~Dg~v~iW~~~~ 370 (379)
. +...+.+++ +++++ ++|++++ .|+.|++|+++.
T Consensus 398 --------------------------------~-~~~~~~~~~-~s~dg----~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 398 --------------------------------E-AGNQPTGLD-VSPDN----RYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp --------------------------------E-CSSSEEEEE-ECTTS----CEEEEEETTTTEEEEEEETT
T ss_pred --------------------------------c-CCCCCceEE-EcCCC----CEEEEEECCCCeEEEEEecC
Confidence 1 234678888 77665 7888776 499999999864
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.1e-31 Score=233.86 Aligned_cols=271 Identities=13% Similarity=0.116 Sum_probs=210.3
Q ss_pred cEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEE-EEEeCCCeEEEEeccCCceeeeEEeecCCCce
Q 016982 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRI-VTVSHDRNSYVWNQEGSEWVPTLVILRLNRAA 101 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v 101 (379)
.++++++.|+.|++||+.++ +.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++....+. +...+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---~~~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---AGSSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---CSSSE
T ss_pred EEEEEcCCCCEEEEEECCCC--eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---CCCCc
Confidence 46788889999999999987 6777777765 58999999999877 667789999999999998665543 34489
Q ss_pred eEEEECCCCCEEEEEe-CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEE-EEeeCCCeEEEEeccccccc
Q 016982 102 LCVQWSPKENKFAVGS-GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFL-ATTSTDGKCRVFSTFIKGVD 179 (379)
Q Consensus 102 ~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~d~~i~v~d~~~~~~~ 179 (379)
.+++|+|+++.|++++ .++.|++||+.+++ ....+ .+...+.+++|+|+++++ ++++.++.|++||+
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~---~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~------ 145 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNT---VAGTV--KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINT------ 145 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEE--ECSSSEEEEEECTTSSEEEEEETTTTEEEEEET------
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCe---EEEEE--eCCCCcceEEECCCCCEEEEEeCCCCEEEEEEC------
Confidence 9999999999886554 57999999998876 34444 345578999999999877 67888999999997
Q ss_pred cccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEE-EEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecC
Q 016982 180 IKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTL-AYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSE 258 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~ 258 (379)
.+++.+..+..+ ..+..++|+|++++| ++++.++.|++||+.+++ ....+. +...+.+++|+|+
T Consensus 146 ------------~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~-~~~~~~~~~~~~~ 210 (391)
T 1l0q_A 146 ------------VTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VIDTVK-VEAAPSGIAVNPE 210 (391)
T ss_dssp ------------TTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEE-CSSEEEEEEECTT
T ss_pred ------------CCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-EEEEEe-cCCCccceEECCC
Confidence 566777777665 456999999999987 567789999999998865 334443 4667899999999
Q ss_pred CcEEEEE----eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccc
Q 016982 259 KMVIGVG----FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHV 334 (379)
Q Consensus 259 ~~~l~~~----~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 334 (379)
|++|+++ .++.+.+|+......... + ..|.
T Consensus 211 g~~l~~~~~~~~~~~v~~~d~~~~~~~~~---~-------------------------------------------~~~~ 244 (391)
T 1l0q_A 211 GTKAYVTNVDKYFNTVSMIDTGTNKITAR---I-------------------------------------------PVGP 244 (391)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTEEEEE---E-------------------------------------------ECCS
T ss_pred CCEEEEEecCcCCCcEEEEECCCCeEEEE---E-------------------------------------------ecCC
Confidence 9877744 478999998765432111 1 1232
Q ss_pred cceeeeeeecccCCcccceE-EEeecCceEEEEeCCCccccccC
Q 016982 335 NCINCIVPLREAGSSRITRF-TTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 335 ~~v~~~~~~~~~~~~~~~~l-~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
.+.+++ +++++ ++| ++++.|+.|++||+.+++.++.+
T Consensus 245 -~~~~~~-~s~dg----~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 245 -DPAGIA-VTPDG----KKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp -SEEEEE-ECTTS----SEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred -CccEEE-EccCC----CEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 467888 77665 655 78899999999999988776544
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=246.30 Aligned_cols=224 Identities=17% Similarity=0.160 Sum_probs=187.7
Q ss_pred CCeEEEEEecCCceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeccCCceeeeEEe-----------ecCC
Q 016982 31 NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQEGSEWVPTLVI-----------LRLN 98 (379)
Q Consensus 31 dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~-----------~~~~ 98 (379)
++.+++|++... +....+.+|.+.|++++|+| ++++|++++.||.|++||+.+++....+.. ..|.
T Consensus 22 ~~~~~v~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 22 ESTRRVLGLELN--KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp HHHHHHHTEEEC--TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred cCcceeeccccC--cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC
Confidence 445777877765 45667788999999999999 999999999999999999998865544432 1388
Q ss_pred CceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC---cEEEEeeCCCeEEEEecc
Q 016982 99 RAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN---VFLATTSTDGKCRVFSTF 174 (379)
Q Consensus 99 ~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l~~~~~d~~i~v~d~~ 174 (379)
..|.+++|+| ++++|++++.|+.|++||+.... ....+ .+...+.++.|+|.+ .++++++.++.|++||+
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~- 173 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ---TADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL- 173 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE---EEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES-
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc---cceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC-
Confidence 9999999999 78899999999999999998876 34443 477889999999854 59999999999999997
Q ss_pred ccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCceeeee----------
Q 016982 175 IKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGN-TLAYVGHNSMIYFVDDVGPSPLAQNV---------- 243 (379)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~---------- 243 (379)
..++.+..+..|...|.+++|+|++. +|++++.||.|++||++........+
T Consensus 174 -----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 174 -----------------KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp -----------------SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred -----------------CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccccee
Confidence 56777888889999999999999998 58899999999999998765444444
Q ss_pred -----eeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCC
Q 016982 244 -----AFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETG 279 (379)
Q Consensus 244 -----~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~ 279 (379)
..|...|.+++|+|++++|+ ++.|+.+++|+.....
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred eccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 46788899999999998877 6678899999977543
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.8e-32 Score=240.73 Aligned_cols=238 Identities=14% Similarity=0.227 Sum_probs=203.1
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
.+.+|...|++++| ++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|++ ++|++++.|+.|++||+.
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 241 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG--EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMA 241 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC--CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECS
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC--cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCC
Confidence 45679999999999 7889999999999999999987 67888999999999999974 599999999999999998
Q ss_pred CCceeee-EEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 85 GSEWVPT-LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 85 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
+++.... ....+|...|.+++| +++++++++.|+.|++||+++.. ....+ ..|...|.+++| +++++++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~---~~~~~-~~~~~~v~~~~~--~~~~l~~g~ 313 (435)
T 1p22_A 242 SPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE---FVRTL-NGHKRGIACLQY--RDRLVVSGS 313 (435)
T ss_dssp SSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC---EEEEE-ECCSSCEEEEEE--ETTEEEEEE
T ss_pred CCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc---EEEEE-cCCCCcEEEEEe--CCCEEEEEe
Confidence 8764322 334678899999999 68899999999999999999887 45666 789999999999 468999999
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc-----
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP----- 238 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~----- 238 (379)
.||.|++||+ .+++++..+.+|...|.+++| ++.+|++++.||.|++||+.+...
T Consensus 314 ~dg~i~iwd~------------------~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 373 (435)
T 1p22_A 314 SDNTIRLWDI------------------ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPA 373 (435)
T ss_dssp TTSCEEEEET------------------TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCT
T ss_pred CCCeEEEEEC------------------CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccc
Confidence 9999999997 678889999999999999999 788999999999999999865431
Q ss_pred ---eeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCC
Q 016982 239 ---LAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADET 278 (379)
Q Consensus 239 ---~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~ 278 (379)
....+..|..+|.+++| ++.+|+ ++.|+.+++|+....
T Consensus 374 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 374 GTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp TTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred cchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 45777889999999999 566555 667999999987654
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.3e-32 Score=234.14 Aligned_cols=302 Identities=12% Similarity=0.041 Sum_probs=192.0
Q ss_pred CcceeEEEeC---CCCcEEEEEecCCeEEEEEecCCc--------eEEEEEeccCCCceEEEEEc---------------
Q 016982 10 AQCITCHAWS---PDHAMVAFCPNNNEVHIYKLIQEK--------WEKLHVLQKHDQIVSGIDWS--------------- 63 (379)
Q Consensus 10 ~~~i~~~~~s---~~~~~l~~~~~dg~i~i~~~~~~~--------~~~~~~~~~~~~~v~~~~~~--------------- 63 (379)
+....++.|. |++..+++++.++.|.+|+..... ...+..+. +..++..+.|+
T Consensus 15 ~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 15 NVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQ-TGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp TCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEE-CSSCEEEEEECTTCEEECC-------
T ss_pred CCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEe-cCCCeeeEeecCCccccccccCCCcc
Confidence 4456677774 444444444567899999874321 12222222 33344444443
Q ss_pred -----CCCCEEEEEeCCCeEEEEeccCCceeeeEE---eecCCCceeEEEECC--------CCCEEEEEeCCCeEEEEEe
Q 016982 64 -----VRSNRIVTVSHDRNSYVWNQEGSEWVPTLV---ILRLNRAALCVQWSP--------KENKFAVGSGAKTVCICYY 127 (379)
Q Consensus 64 -----~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~---~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~i~~~ 127 (379)
+++++|++++.|++|++||+.+++...... +.+|...|.+++|+| ++++|++++.|++|+|||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 445689999999999999999886543222 357999999999997 7899999999999999999
Q ss_pred ecCCceeEEEEEeecCCcCEEEEEEcCCC-cEEEEeeCCCeEEEEeccccccccccccCCCcc-------CCcccceEEE
Q 016982 128 EQENNWWVSKLIRKRHDSSVTSVAWHPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSS-------DTKFGEQILQ 199 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 199 (379)
.... ....+ ..|...+.+++|+|++ ++|++++.|+.|++||+................ ..........
T Consensus 174 ~~~~---~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 249 (393)
T 4gq1_A 174 TDEG---PILAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH 249 (393)
T ss_dssp ETTE---EEEEE-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred CCCc---eeeee-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee
Confidence 8876 23344 6788999999999987 589999999999999985332211111000000 0000111122
Q ss_pred eecCCcceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCC------------------eeeEEEec--C
Q 016982 200 LDLSFSWAFGVKWS-PSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLP------------------LRDVLFVS--E 258 (379)
Q Consensus 200 ~~~~~~~v~~~~~s-p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~------------------i~~~~~s~--~ 258 (379)
..+|...+.++.|+ |+++.|++++.|+.+++||+...... ..+..|... .....|+| +
T Consensus 250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 4gq1_A 250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY-NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYM 328 (393)
T ss_dssp --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCT
T ss_pred cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC-ceEeeecCccccEEEccccccccccCcceeEEEccCCC
Confidence 34677788999987 79999999999999999998765422 222222222 22333444 3
Q ss_pred CcEEEE-EeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccce
Q 016982 259 KMVIGV-GFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCI 337 (379)
Q Consensus 259 ~~~l~~-~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 337 (379)
+.++++ +.|+.+++|+......... +.+|...|
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~~~~~----------------------------------------------~~~~~~~V 362 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKDSNSI----------------------------------------------PIQLGMPI 362 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTTCCEE----------------------------------------------EEECSSCE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEE----------------------------------------------ecCCCCcE
Confidence 445554 4588999998765432211 13688899
Q ss_pred eeeeeecccCCcccceEEEeecCceEEEEeCC
Q 016982 338 NCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 338 ~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
++|+ |+++| ++||+++.|| +.+|++.
T Consensus 363 ~sva-fspdG----~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 363 VDFC-WHQDG----SHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEE-ECTTS----SEEEEEESSE-EEEEEEG
T ss_pred EEEE-EcCCC----CEEEEEeCCC-eEEEEEe
Confidence 9999 77776 9999999776 5555543
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.2e-32 Score=232.75 Aligned_cols=271 Identities=15% Similarity=0.173 Sum_probs=203.7
Q ss_pred EEEEEeccCCCceEEEEEcCC---CCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCe
Q 016982 45 EKLHVLQKHDQIVSGIDWSVR---SNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT 121 (379)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 121 (379)
+.+..+.+|...|++++|+|+ |++|++++.|+.|++||+.+...........|...|.+++|+|++++|++++.|+.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 567788999999999999999 59999999999999999997332232344679999999999999999999999999
Q ss_pred EEEEEeecCCceeEEEEEeecCCcCEEEEEE--cCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEE
Q 016982 122 VCICYYEQENNWWVSKLIRKRHDSSVTSVAW--HPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ 199 (379)
Q Consensus 122 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
|++||++... ... + ..|...|.+++| +|++++|++++.|+.|++||+ +.++++..
T Consensus 110 v~iwd~~~~~---~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~------------------~~~~~~~~ 166 (368)
T 3mmy_A 110 AKMWDLSSNQ---AIQ-I-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT------------------RSSNPMMV 166 (368)
T ss_dssp EEEEETTTTE---EEE-E-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECS------------------SCSSCSEE
T ss_pred EEEEEcCCCC---cee-e-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC------------------CCCcEEEE
Confidence 9999998876 233 3 579999999999 899999999999999999997 55667777
Q ss_pred eecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee-eecCCeeeEEEecCCc-----EEEEEeCCCeEEE
Q 016982 200 LDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA-FRDLPLRDVLFVSEKM-----VIGVGFDCNPMVF 273 (379)
Q Consensus 200 ~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~i~~~~~s~~~~-----~l~~~~d~~~~i~ 273 (379)
+..+. .+.++.+.+ ..+++++.++.+++|++........... .+...+..+.+.++.. +++++.|+.+++|
T Consensus 167 ~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 167 LQLPE-RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp EECSS-CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred EecCC-CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 76654 466666654 4788888999999999987654433332 2334566666666543 5558889999999
Q ss_pred EecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccce
Q 016982 274 AADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITR 353 (379)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 353 (379)
+.+..........+..... ........+|...|++++ +++++ ++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~v~~~~-~sp~~----~~ 287 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRS-------------------------------NGTNTSAPQDIYAVNGIA-FHPVH----GT 287 (368)
T ss_dssp ESSCSCHHHHSEEEECSEE-------------------------------C----CCCEEECCEEEEE-ECTTT----CC
T ss_pred ecCCCCccccceeeeeeec-------------------------------ccccccccccccceEEEE-EecCC----CE
Confidence 9876421000000000000 000002245666899999 77665 89
Q ss_pred EEEeecCceEEEEeCCCccccccC
Q 016982 354 FTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 354 l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
|++|+.||.|++||+.+++.++.+
T Consensus 288 l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 288 LATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEC
T ss_pred EEEEccCCeEEEEECCCCcEEEEe
Confidence 999999999999999998877655
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=234.81 Aligned_cols=238 Identities=9% Similarity=0.015 Sum_probs=182.7
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCC------cee
Q 016982 61 DWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQEN------NWW 134 (379)
Q Consensus 61 ~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~------~~~ 134 (379)
.+.+++++|++|+.||.|++||+.+++....+. ...|.++.|+|+ +++++.|+.|++|+..... ...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 345678899999999999999999998666554 467888899988 9999999999999765321 111
Q ss_pred EEEEEeecCCcCEEEEEEcC--CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-cCCcceEEEE
Q 016982 135 VSKLIRKRHDSSVTSVAWHP--NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-LSFSWAFGVK 211 (379)
Q Consensus 135 ~~~~~~~~~~~~v~~~~~~p--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 211 (379)
........|...|.+++|+| +++++++++.|+.|++||+ ..++++.... .+...+.+++
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~------------------~~~~~~~~~~~~~~~~i~~~~ 177 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSY------------------EDDSQYIVHSAKSDVEYSSGV 177 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEES------------------SSSCEEEEECCCSSCCCCEEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEEC------------------CCCcEEEEEecCCCCceEEEE
Confidence 23333357778999999999 9999999999999999997 5566655553 3455799999
Q ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCceeeeeee-ecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEeccc
Q 016982 212 WSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF-RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDER 290 (379)
Q Consensus 212 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~ 290 (379)
|+|++.+|++|+.||.|++||++++......+.. |..+|.+++|+|+|.+|+++.++.+++|+.........
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~------- 250 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLA------- 250 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBS-------
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCccee-------
Confidence 9999999999999999999999988755366776 89999999999999999977788999998765431110
Q ss_pred ccCCCCCccCCCcccccceeeccccccCccccccccccccccccccee--eeeeecccCCcccceEEEeec-CceEEEEe
Q 016982 291 KTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCIN--CIVPLREAGSSRITRFTTSGL-DGKIVTWD 367 (379)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~~~~~l~t~~~-Dg~v~iW~ 367 (379)
+. .+..|...+. +++ |++++ ++|++++. |+.|++|+
T Consensus 251 ----------------~~--------------------~~~~~~~~~~~~~~~-~~~~g----~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 251 ----------------YP--------------------TYTIPEFKTGTVTYD-IDDSG----KNMIAYSNESNSLTIYK 289 (343)
T ss_dssp ----------------SC--------------------CCBC-----CCEEEE-ECTTS----SEEEEEETTTTEEEEEE
T ss_pred ----------------ec--------------------ccccccccccceEEE-ECCCC----CEEEEecCCCCcEEEEE
Confidence 00 0012333333 577 77665 89999998 99999999
Q ss_pred CCCc
Q 016982 368 LESQ 371 (379)
Q Consensus 368 ~~~~ 371 (379)
+.+.
T Consensus 290 ~~~~ 293 (343)
T 3lrv_A 290 FDKK 293 (343)
T ss_dssp ECTT
T ss_pred Eccc
Confidence 8654
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.2e-30 Score=223.25 Aligned_cols=232 Identities=15% Similarity=0.285 Sum_probs=183.8
Q ss_pred ceeccCcceeEEEeCC--CCcEEEEEecCCeEEEEEecCCc-------eEEEEEeccCCCceEEEEEcCC--CCEEEEEe
Q 016982 5 AVHQFAQCITCHAWSP--DHAMVAFCPNNNEVHIYKLIQEK-------WEKLHVLQKHDQIVSGIDWSVR--SNRIVTVS 73 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~i~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~ 73 (379)
.+.+|..+|++++|+| ++++|++|+.||.|++||+.+++ ++....+..|...|.+++|+|+ +++|++++
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 131 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG 131 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec
Confidence 3467999999999999 69999999999999999998752 2567888899999999999999 99999999
Q ss_pred CCCeEEEEeccCCceeeeEEe-----------ecCCCceeEEEECCC---CCEEEEEeCCCeEEEEEeecCCceeEEEEE
Q 016982 74 HDRNSYVWNQEGSEWVPTLVI-----------LRLNRAALCVQWSPK---ENKFAVGSGAKTVCICYYEQENNWWVSKLI 139 (379)
Q Consensus 74 ~d~~i~vw~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 139 (379)
.|+.|++||+.+++....+.. ..+...+.+++|+|+ +..+++++.++.+.+|+...... .....+
T Consensus 132 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~ 210 (351)
T 3f3f_A 132 NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-HVAAKL 210 (351)
T ss_dssp TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-EEEEEC
T ss_pred CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce-eeeeec
Confidence 999999999988764433321 246788999999997 89999999999997766655542 223344
Q ss_pred eecCCcCEEEEEEcCCC----cEEEEeeCCCeEEEEeccccccccccccC----------------------------CC
Q 016982 140 RKRHDSSVTSVAWHPNN----VFLATTSTDGKCRVFSTFIKGVDIKEKKE----------------------------GT 187 (379)
Q Consensus 140 ~~~~~~~v~~~~~~p~~----~~l~~~~~d~~i~v~d~~~~~~~~~~~~~----------------------------~~ 187 (379)
..|...|.+++|+|++ ++|++++.||.|++||+............ ..
T Consensus 211 -~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 211 -PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp -CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred -CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 6899999999999998 89999999999999998532110000000 00
Q ss_pred ccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 188 SSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
.......+.+..+.+|...|++++|+|++++|++++.||.|++||+..+..
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 001123366777888999999999999999999999999999999987654
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3e-29 Score=218.39 Aligned_cols=239 Identities=13% Similarity=0.140 Sum_probs=190.0
Q ss_pred cCcceeEEEeCCCCcEE-EEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEE-eCCCeEEEEeccCC
Q 016982 9 FAQCITCHAWSPDHAMV-AFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV-SHDRNSYVWNQEGS 86 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~ 86 (379)
+...+.+++|+|++++| ++++.|+.|++||+.++ +.+..+..+. .+.+++|+|++++|+.+ +.++.|++||+.++
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 44568999999999977 66668999999999887 5666666554 89999999999987554 46799999999998
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEE-EEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEE-EEeeC
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKF-AVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFL-ATTST 164 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~ 164 (379)
+....+ .+...+.+++|+|+++.+ ++++.++.|++||+.+++ ....+ .. ...+.+++|+|+++++ ++++.
T Consensus 107 ~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~-~~-~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 107 TVAGTV---KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA---VINTV-SV-GRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EEEEEE---ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEE-EC-CSSEEEEEECTTSSEEEEEETT
T ss_pred eEEEEE---eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc---EEEEE-ec-CCCcceEEECCCCCEEEEEeCC
Confidence 865544 345678999999999977 677779999999998776 34444 33 3567999999999877 57778
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc---CCCeEEEEECCCCCceee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG---HNSMIYFVDDVGPSPLAQ 241 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~---~d~~i~v~d~~~~~~~~~ 241 (379)
++.|++||+ .+++.+..+.. ...+.+++|+|++++|++++ .++.|++||+.+++ .+.
T Consensus 179 ~~~v~~~d~------------------~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~-~~~ 238 (391)
T 1l0q_A 179 SMSISVIDT------------------VTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK-ITA 238 (391)
T ss_dssp TTEEEEEET------------------TTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE-EEE
T ss_pred CCEEEEEEC------------------CCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe-EEE
Confidence 999999997 55566655543 56789999999999999887 68999999998875 345
Q ss_pred eeeeecCCeeeEEEecCCcEEE-E-EeCCCeEEEEecCCC
Q 016982 242 NVAFRDLPLRDVLFVSEKMVIG-V-GFDCNPMVFAADETG 279 (379)
Q Consensus 242 ~~~~~~~~i~~~~~s~~~~~l~-~-~~d~~~~i~~~~~~~ 279 (379)
.+..+ ..+.+++|+|+|++|+ + +.|+.+++|+.....
T Consensus 239 ~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 239 RIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 56544 4578999999998764 4 568899999987643
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2e-30 Score=222.24 Aligned_cols=248 Identities=10% Similarity=0.040 Sum_probs=174.8
Q ss_pred EEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEE-E
Q 016982 36 IYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKF-A 114 (379)
Q Consensus 36 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 114 (379)
||++.+. .++..+..|...|.+++|+|+|++|++|+.++ +++|++.+.+..... +...+..+++.++++.+ +
T Consensus 3 i~s~~~~--~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 75 (355)
T 3vu4_A 3 LGSMITR--NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ----EMRHLSKVRMLHRTNYVAF 75 (355)
T ss_dssp ------------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE----ECSCCCEEEECTTSSEEEE
T ss_pred ccccccc--CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee----ecCCeEEEEEcCCCCEEEE
Confidence 4555554 55667788999999999999999999988765 789999877643332 22357888999988877 4
Q ss_pred EEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCccc
Q 016982 115 VGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194 (379)
Q Consensus 115 ~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
+++.|+.|++||..+++ ....+ .+...|.+++|+++. ++++ .++.|++||+. ..
T Consensus 76 ~~~~d~~v~iWd~~~~~---~~~~~--~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~------------------~~ 129 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQ---DVSRI--KVDAPVKDLFLSREF--IVVS-YGDVISVFKFG------------------NP 129 (355)
T ss_dssp ECSSTTEEEEEETTTTE---EEEEE--ECSSCEEEEEECSSE--EEEE-ETTEEEEEESS------------------TT
T ss_pred EECCccEEEEEECCCCc---EEEEE--ECCCceEEEEEcCCE--EEEE-EcCEEEEEECC------------------CC
Confidence 57778999999998876 34444 467799999998764 4433 47899999972 22
Q ss_pred -ceEEEeecCCcceEEEEECCCCCEEEE--EcCCCeEEEEECCCCC---------------ceeeeeeeecCCeeeEEEe
Q 016982 195 -EQILQLDLSFSWAFGVKWSPSGNTLAY--VGHNSMIYFVDDVGPS---------------PLAQNVAFRDLPLRDVLFV 256 (379)
Q Consensus 195 -~~~~~~~~~~~~v~~~~~sp~~~~l~~--~~~d~~i~v~d~~~~~---------------~~~~~~~~~~~~i~~~~~s 256 (379)
+.+..+.. +...+++++ .++++ ++.+|.|++||+.++. +....+.+|..+|.+++|+
T Consensus 130 ~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 130 WKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp CCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC
T ss_pred ceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC
Confidence 33333333 334456676 66666 5789999999998754 1147788899999999999
Q ss_pred cCCcEEE-EEeCCC-eEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccc-c
Q 016982 257 SEKMVIG-VGFDCN-PMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGT-H 333 (379)
Q Consensus 257 ~~~~~l~-~~~d~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h 333 (379)
|+|++|+ ++.|+. +++|+........... .+ |
T Consensus 205 ~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~---------------------------------------------~g~h 239 (355)
T 3vu4_A 205 RKSDMVATCSQDGTIIRVFKTEDGVLVREFR---------------------------------------------RGLD 239 (355)
T ss_dssp TTSSEEEEEETTCSEEEEEETTTCCEEEEEE---------------------------------------------CTTC
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEE---------------------------------------------cCCC
Confidence 9999888 667887 9999987644222110 24 8
Q ss_pred ccceeeeeeecccCCcccceEEEeecCceEEEEeCCCc
Q 016982 334 VNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQ 371 (379)
Q Consensus 334 ~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~ 371 (379)
...|++++ |++++ ++|++++.|+.|++||+.++
T Consensus 240 ~~~v~~~~-~s~~~----~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 240 RADVVDMK-WSTDG----SKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CSCEEEEE-ECTTS----CEEEEEETTCEEEEEESSCC
T ss_pred CCcEEEEE-ECCCC----CEEEEEECCCEEEEEEccCC
Confidence 99999999 77766 89999999999999999764
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.1e-29 Score=208.52 Aligned_cols=277 Identities=9% Similarity=0.030 Sum_probs=185.9
Q ss_pred eeEEEeCCCCc---EEEEEecCCeEEEEEecCC-ceEEEEEeccCCCceEEEEEcCCCC-EEEEEeCCCeE-EEEec---
Q 016982 13 ITCHAWSPDHA---MVAFCPNNNEVHIYKLIQE-KWEKLHVLQKHDQIVSGIDWSVRSN-RIVTVSHDRNS-YVWNQ--- 83 (379)
Q Consensus 13 i~~~~~s~~~~---~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i-~vw~~--- 83 (379)
+.++-|-..|- .++++++ ..|++|+..+. ++++++++..|..+|..+.+.||.. ++..+-.+-.+ .++-+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55666654432 5667765 69999999876 5799999999999999999999763 33333222111 11111
Q ss_pred -cCCceeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC---CCc
Q 016982 84 -EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS--GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP---NNV 157 (379)
Q Consensus 84 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~ 157 (379)
++......+...++...+..+ ++++.+.+++ .|+.|++|++..... ....+ ..|...+..++|+| ++.
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~-~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQ-FLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSC--EEEEE-EECCCSSCEEEEEEEETSTT
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCc--eeeee-ccCCCceeeEEeeccCCCCc
Confidence 111111222223344445544 5666666644 599999999965332 34444 68888899999999 779
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCC---cceEEEEECCCCCEE------------EEE
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF---SWAFGVKWSPSGNTL------------AYV 222 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~l------------~~~ 222 (379)
+|++++.|++|+|||+ +++++++++.+|. ..+.+++|+|+|.++ ++|
T Consensus 195 ~LaSgS~D~TIkIWDl------------------~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSG 256 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNL------------------KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLR 256 (356)
T ss_dssp EEEEEETTSEEEEEET------------------TTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----------
T ss_pred eEEEecCCCcEEEEEC------------------CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeecc
Confidence 9999999999999997 7899999997654 357788999999886 567
Q ss_pred cCCCeEEEEECCCCCceeeee-----eeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCCcEEEEEEecccccCCCC
Q 016982 223 GHNSMIYFVDDVGPSPLAQNV-----AFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETGIWTFIKFLDERKTSSSG 296 (379)
Q Consensus 223 ~~d~~i~v~d~~~~~~~~~~~-----~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
+.|++|++||..+++.+ ..+ .+|...+.+..+ ++.+++ ++.|+++++|+........
T Consensus 257 s~D~tIklWd~~tgk~l-~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~-------------- 319 (356)
T 2w18_A 257 SPVFQLIVINPKTTLSV-GVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTA-------------- 319 (356)
T ss_dssp -CCEEEEEEETTTTEEE-EEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEE--------------
T ss_pred CCCcEEEEEECCCCEEE-EEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEE--------------
Confidence 78999999999877532 332 244434333333 367777 4569999999987655332
Q ss_pred CccCCCcccccceeeccccccCcccccccccccccccccceee-eeeecccCCcccceEEEeecCceEEEEeC
Q 016982 297 PKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINC-IVPLREAGSSRITRFTTSGLDGKIVTWDL 368 (379)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~ 368 (379)
.+.+|...+.+ ++ |+|++ ++|+||+.|++|||||+
T Consensus 320 --------------------------------tL~gH~~~vvs~va-fSPDG----~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 320 --------------------------------LLPPVSDQHWSFVK-WSGTD----SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --------------------------------EECCC--CCCCEEE-ECSSS----SEEEEECTTSCEEEEEE
T ss_pred --------------------------------EecCCCCCeEEEEE-ECCCC----CEEEEEECCCcEEEecC
Confidence 22468776664 77 88776 99999999999999996
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=4.3e-29 Score=220.36 Aligned_cols=290 Identities=9% Similarity=-0.009 Sum_probs=216.3
Q ss_pred CcceeEEE---eCCCCcEEEEEe--------------cCC--eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEE
Q 016982 10 AQCITCHA---WSPDHAMVAFCP--------------NNN--EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIV 70 (379)
Q Consensus 10 ~~~i~~~~---~s~~~~~l~~~~--------------~dg--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 70 (379)
...+..++ |+|+++.+++.+ .++ .|..+|..++..+.+..+..+. .+.+++|+|++.+++
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAI 138 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEE
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEE
Confidence 45677888 898877665432 223 4444444445456677776554 456999999777778
Q ss_pred EEeCCCeEEEEeccCCceeeeEE---eecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCE
Q 016982 71 TVSHDRNSYVWNQEGSEWVPTLV---ILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSV 147 (379)
Q Consensus 71 ~~~~d~~i~vw~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v 147 (379)
+++.++.|++||+.+++...... ...|...+.+++|+|+++++++++.|+.|++||+++.. ....+ ..|...+
T Consensus 139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~---~~~~~-~~~~~~~ 214 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA---YKATV-DLTGKWS 214 (433)
T ss_dssp EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC---EEEEE-ECSSSSE
T ss_pred EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce---EEEEE-cCCCCCe
Confidence 88888999999999987654321 23577899999999999999999999999999998876 34555 6788899
Q ss_pred EEEEEcCCCcEEE-EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc---
Q 016982 148 TSVAWHPNNVFLA-TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG--- 223 (379)
Q Consensus 148 ~~~~~~p~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--- 223 (379)
.+++|+|++++++ +++.++.|++||+ .+++.+..+..+ ..+.+++|+|++++|++++
T Consensus 215 ~~~~~~~~~~~l~~~~~~~~~i~~~d~------------------~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 215 KILLYDPIRDLVYCSNWISEDISVIDR------------------KTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSA 275 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEET------------------TTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEES
T ss_pred eEEEEcCCCCEEEEEecCCCcEEEEEC------------------CCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCC
Confidence 9999999998775 5557999999997 556666666653 4589999999999999887
Q ss_pred -----CCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEE-EE-EeCCCeEEEEecCCCcEEEEEEecccccCCCC
Q 016982 224 -----HNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVI-GV-GFDCNPMVFAADETGIWTFIKFLDERKTSSSG 296 (379)
Q Consensus 224 -----~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~-~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
.|+.|++||+.+++. ...+ .+...+.+++|+|+++.+ ++ +.++.+.+|+......... +
T Consensus 276 ~~~~~~dg~i~~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~---~--------- 341 (433)
T 3bws_A 276 SNQESGGGRLGIYSMDKEKL-IDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKS---I--------- 341 (433)
T ss_dssp CTTCSCCEEEEEEETTTTEE-EEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEE---E---------
T ss_pred CccccCCCeEEEEECCCCcE-Eeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEE---e---------
Confidence 588999999987653 3333 455688999999999754 43 6788999998775321111 1
Q ss_pred CccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeec---------------Cc
Q 016982 297 PKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGL---------------DG 361 (379)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~---------------Dg 361 (379)
.|...+.+++ +++++ ++|++++. ||
T Consensus 342 -----------------------------------~~~~~~~~~~-~s~dg----~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 342 -----------------------------------PVFDKPNTIA-LSPDG----KYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp -----------------------------------ECSSSEEEEE-ECTTS----SEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred -----------------------------------cCCCCCCeEE-EcCCC----CEEEEEecCCCccccccccccccce
Confidence 2445677888 66665 77777665 68
Q ss_pred eEEEEeCCCccccccC
Q 016982 362 KIVTWDLESQEDLLNY 377 (379)
Q Consensus 362 ~v~iW~~~~~~~~~~~ 377 (379)
.|++||+.+++.++.+
T Consensus 382 ~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 382 KVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCcEEEEe
Confidence 9999999988766543
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.7e-30 Score=210.65 Aligned_cols=200 Identities=12% Similarity=0.089 Sum_probs=149.1
Q ss_pred CcceeEEEeCCC----CcEEEEEec--------------------CCeEEEEEecCCceEEEEEeccCCCceEEEEEcC-
Q 016982 10 AQCITCHAWSPD----HAMVAFCPN--------------------NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV- 64 (379)
Q Consensus 10 ~~~i~~~~~s~~----~~~l~~~~~--------------------dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 64 (379)
...|.+++|+|| ++.+++++. |+.|++|++... .+.+..+.+|...++.++|+|
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d-G~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED-GGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT-SCEEEEEEECCCSSCEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC-CceeeeeccCCCceeeEEeecc
Confidence 347888999999 778877653 777888887442 145566667777888888888
Q ss_pred --CCCEEEEEeCCCeEEEEeccCCceeeeEEeec-CCCceeEEEECCCCCEE------------EEEeCCCeEEEEEeec
Q 016982 65 --RSNRIVTVSHDRNSYVWNQEGSEWVPTLVILR-LNRAALCVQWSPKENKF------------AVGSGAKTVCICYYEQ 129 (379)
Q Consensus 65 --~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l------------~~~~~d~~v~i~~~~~ 129 (379)
++.+|++++.|++|+|||+.+++++..+.... +...+.+++|+|+|.++ ++|+.|+++++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 66889999999999999999999777763111 23467788999999876 5677899999999987
Q ss_pred CCceeEEEEE----eecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCc
Q 016982 130 ENNWWVSKLI----RKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS 205 (379)
Q Consensus 130 ~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (379)
+.. ...+ ..+|...+.+..+ ++.++++++.|++|+|||+ .+++++.++.+|..
T Consensus 270 gk~---l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl------------------~tGk~l~tL~gH~~ 326 (356)
T 2w18_A 270 TLS---VGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDL------------------LLGQCTALLPPVSD 326 (356)
T ss_dssp TEE---EEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEET------------------TTCSEEEEECCC--
T ss_pred CEE---EEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEEC------------------CCCcEEEEecCCCC
Confidence 762 2222 1356555554444 4789999999999999997 78999999998877
Q ss_pred ceE-EEEECCCCCEEEEEcCCCeEEEEEC
Q 016982 206 WAF-GVKWSPSGNTLAYVGHNSMIYFVDD 233 (379)
Q Consensus 206 ~v~-~~~~sp~~~~l~~~~~d~~i~v~d~ 233 (379)
.+. .++|+|||++|++|+.|++|+|||+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 655 5899999999999999999999985
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.2e-29 Score=220.11 Aligned_cols=280 Identities=17% Similarity=0.151 Sum_probs=207.9
Q ss_pred CcceeEEEeCCCCc-EEEEEe----cCC----eEEEEEe--cCCceEEEEEeccCCCceEEEEEcC--------------
Q 016982 10 AQCITCHAWSPDHA-MVAFCP----NNN----EVHIYKL--IQEKWEKLHVLQKHDQIVSGIDWSV-------------- 64 (379)
Q Consensus 10 ~~~i~~~~~s~~~~-~l~~~~----~dg----~i~i~~~--~~~~~~~~~~~~~~~~~v~~~~~~~-------------- 64 (379)
...+...+|++.|. ++++|+ .+| .|++||+ .+++......+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34677888988774 566775 467 8999999 7774333356888888888777765
Q ss_pred CCCEEEEEeCC------CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC---eEEEEEeecCCceeE
Q 016982 65 RSNRIVTVSHD------RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK---TVCICYYEQENNWWV 135 (379)
Q Consensus 65 ~~~~l~~~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~i~~~~~~~~~~~ 135 (379)
.+..++.++.+ +.|++||+.++. .. .+..|...+.+++|+|+|+.|++++.++ .|++||+.+++
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~--~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~---- 214 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGYN-QF--VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---- 214 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSCS-CE--EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCCC-CE--EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc----
Confidence 15567666654 799999998654 22 3356788999999999999999999875 99999998876
Q ss_pred EEEEeecCCcCEEEEEEcCCCcEEE-EeeCCCe--EEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEE
Q 016982 136 SKLIRKRHDSSVTSVAWHPNNVFLA-TTSTDGK--CRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKW 212 (379)
Q Consensus 136 ~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 212 (379)
...+ ..+...+.+++|+|||++|+ +++.++. |++||+ .+++. ..+..|...+.+++|
T Consensus 215 ~~~l-~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~------------------~~~~~-~~l~~~~~~~~~~~~ 274 (415)
T 2hqs_A 215 VRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL------------------ASGQI-RQVTDGRSNNTEPTW 274 (415)
T ss_dssp EEEE-ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET------------------TTCCE-EECCCCSSCEEEEEE
T ss_pred EEEe-ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEEC------------------CCCCE-EeCcCCCCcccceEE
Confidence 2344 57788999999999999888 5655554 889986 34443 566777888999999
Q ss_pred CCCCCEEEEEcC-CC--eEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEE-eC---CCeEEEEecCCCcEEEEE
Q 016982 213 SPSGNTLAYVGH-NS--MIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVG-FD---CNPMVFAADETGIWTFIK 285 (379)
Q Consensus 213 sp~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~d---~~~~i~~~~~~~~~~~~~ 285 (379)
+|||++|++++. ++ .|++||+.++.. ..+..+...+.+++|+|+|++|+.+ .+ ..+.+|+...... .
T Consensus 275 spdg~~l~~~s~~~g~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~--- 348 (415)
T 2hqs_A 275 FPDSQNLAFTSDQAGRPQVYKVNINGGAP--QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-Q--- 348 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSSCC--EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-E---
T ss_pred CCCCCEEEEEECCCCCcEEEEEECCCCCE--EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-E---
Confidence 999999988775 44 688889887652 4455566788899999999988844 33 3577776654331 1
Q ss_pred EecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCc---e
Q 016982 286 FLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDG---K 362 (379)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg---~ 362 (379)
.+..|. .+.+++ |++++ ++|++++.|+ .
T Consensus 349 -------------------------------------------~l~~~~-~~~~~~-~spdg----~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 349 -------------------------------------------VLSSTF-LDETPS-LAPNG----TMVIYSSSQGMGSV 379 (415)
T ss_dssp -------------------------------------------ECCCSS-SCEEEE-ECTTS----SEEEEEEEETTEEE
T ss_pred -------------------------------------------EecCCC-CcCCeE-EcCCC----CEEEEEEcCCCccE
Confidence 112343 678888 77666 8899888877 8
Q ss_pred EEEEeCCCc
Q 016982 363 IVTWDLESQ 371 (379)
Q Consensus 363 v~iW~~~~~ 371 (379)
|++||+..+
T Consensus 380 l~~~d~~g~ 388 (415)
T 2hqs_A 380 LNLVSTDGR 388 (415)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 999998753
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=7.2e-28 Score=216.73 Aligned_cols=299 Identities=10% Similarity=0.018 Sum_probs=223.0
Q ss_pred ceeEEEeCCCCcEEEEEecCCeEEEEEe--cCCceEEEEEeccCCCceEEEEEcC----CCCEEEEEe-CCCeEEEEecc
Q 016982 12 CITCHAWSPDHAMVAFCPNNNEVHIYKL--IQEKWEKLHVLQKHDQIVSGIDWSV----RSNRIVTVS-HDRNSYVWNQE 84 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~--~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~-~d~~i~vw~~~ 84 (379)
.+.+++|+|||++|++++.|+.|.+||+ .+. +.+..+.. ...+..++|+| +|++|++++ .+++|.+||..
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCC--cEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 3889999999999999999999999999 665 67777774 45679999999 999998887 48999999999
Q ss_pred CCceeeeEEeec--------C-CCceeEEEECCCCCE-EEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC
Q 016982 85 GSEWVPTLVILR--------L-NRAALCVQWSPKENK-FAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP 154 (379)
Q Consensus 85 ~~~~~~~~~~~~--------~-~~~v~~~~~~~~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 154 (379)
+++.+..+...+ | ...+..+.++|++.. +++...++.|.+||+....... ...+ .+...+.++.|+|
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i--~~~~~~~~~~~sp 333 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI--GAAPFLHDGGWDS 333 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE--ECCSSCCCEEECT
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe--ccCcCccCceECC
Confidence 998777665322 2 237889999997664 5556678999999998765322 1222 4566788899999
Q ss_pred CCcEEEEee-CCCeEEEEeccccccccccccCCCccCCcccceEEEeec----CCcceEEEEECCC-CCEEEEEc-CCCe
Q 016982 155 NNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL----SFSWAFGVKWSPS-GNTLAYVG-HNSM 227 (379)
Q Consensus 155 ~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~sp~-~~~l~~~~-~d~~ 227 (379)
++++|++++ .+++|.+||+ .+++++..+.. |.+....+ ++|+ +..+++++ .|++
T Consensus 334 dg~~l~va~~~~~~v~v~D~------------------~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~ 394 (543)
T 1nir_A 334 SHRYFMTAANNSNKVAVIDS------------------KDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS 394 (543)
T ss_dssp TSCEEEEEEGGGTEEEEEET------------------TTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred CCCEEEEEecCCCeEEEEEC------------------CCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce
Confidence 999776554 5889999997 66777777764 44333333 4776 66666765 6899
Q ss_pred EEEEECCCC------CceeeeeeeecCCeeeEEEecCCcEEEEEe--------CCCeEEEEecCCCcE-EEEEEeccccc
Q 016982 228 IYFVDDVGP------SPLAQNVAFRDLPLRDVLFVSEKMVIGVGF--------DCNPMVFAADETGIW-TFIKFLDERKT 292 (379)
Q Consensus 228 i~v~d~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------d~~~~i~~~~~~~~~-~~~~~~~~~~~ 292 (379)
|.+||+.+. .++++++..|...+..+.|+|+|++|.++. ++.|.+|+....... +.+..- .
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~-~--- 470 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA-E--- 470 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH-H---
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeech-h---
Confidence 999998872 346788888888889999999999999765 679999998764421 211000 0
Q ss_pred CCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEe-----ecCceEEEEe
Q 016982 293 SSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTS-----GLDGKIVTWD 367 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~-----~~Dg~v~iW~ 367 (379)
. .-+..|...+..++ |+++| +.|+.+ +.|+.|.|||
T Consensus 471 -----------------~-----------------~~~~~~~~~~~~~~-~~~~g----~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 471 -----------------W-----------------ADLGEGAKRVVQPE-YNKRG----DEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp -----------------H-----------------HCCCSSCCEEEEEE-ECSSS----SEEEEEEECCTTSCCEEEEEE
T ss_pred -----------------h-----------------cccCCCCCceEecc-CCCCC----CEEEEEeecCCCCCCeEEEEE
Confidence 0 00134567899999 88777 666644 2489999999
Q ss_pred CCCccccccCC
Q 016982 368 LESQEDLLNYH 378 (379)
Q Consensus 368 ~~~~~~~~~~~ 378 (379)
.+++++++.++
T Consensus 512 ~~t~~~~~~i~ 522 (543)
T 1nir_A 512 DKTLKLKAVVK 522 (543)
T ss_dssp TTTTEEEEEEC
T ss_pred CCCceEEEeec
Confidence 99998887654
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.6e-28 Score=213.27 Aligned_cols=238 Identities=14% Similarity=0.100 Sum_probs=179.7
Q ss_pred eeccCcceeEEEeCC--------------CCcEEEEEecC------CeEEEEEecCCceEEEEEeccCCCceEEEEEcCC
Q 016982 6 VHQFAQCITCHAWSP--------------DHAMVAFCPNN------NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR 65 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~--------------~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 65 (379)
+.+|...+..+++++ .+..+++++.+ +.|++||+.+. ....+..|...+.+++|+|+
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~---~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY---NQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC---SCEEEEEESSCEEEEEECTT
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC---CCEEEeCCCCcceeeEEcCC
Confidence 455666666666654 25667666654 79999999864 34566778899999999999
Q ss_pred CCEEEEEeCCC---eEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEE-EEeCCCe--EEEEEeecCCceeEEEEE
Q 016982 66 SNRIVTVSHDR---NSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFA-VGSGAKT--VCICYYEQENNWWVSKLI 139 (379)
Q Consensus 66 ~~~l~~~~~d~---~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--v~i~~~~~~~~~~~~~~~ 139 (379)
|++|++++.++ .|++||+.+++.. .+..+...+.+++|+|+|+.|+ +++.++. |++||+.++. ...+
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l 262 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQV 262 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEEC
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeC
Confidence 99999999875 8999999998753 2356778899999999999888 5555554 8888887765 2444
Q ss_pred eecCCcCEEEEEEcCCCcEEEEeeC-CC--eEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCC
Q 016982 140 RKRHDSSVTSVAWHPNNVFLATTST-DG--KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSG 216 (379)
Q Consensus 140 ~~~~~~~v~~~~~~p~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 216 (379)
..|...+.+++|+|+|++|++++. ++ .|.+||+ ..++ ...+..+...+.+++|+|+|
T Consensus 263 -~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~------------------~~~~-~~~l~~~~~~~~~~~~spdG 322 (415)
T 2hqs_A 263 -TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI------------------NGGA-PQRITWEGSQNQDADVSSDG 322 (415)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET------------------TSSC-CEECCCSSSEEEEEEECTTS
T ss_pred -cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC------------------CCCC-EEEEecCCCcccCeEECCCC
Confidence 678889999999999999988876 45 5777775 3333 34455566788999999999
Q ss_pred CEEEEEcCC---CeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCC---CeEEEEec
Q 016982 217 NTLAYVGHN---SMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDC---NPMVFAAD 276 (379)
Q Consensus 217 ~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~---~~~i~~~~ 276 (379)
++|++++.+ ..|++||+.++.. ..+..+. .+.+++|+|+|++|+ ++.++ .+.+|+.+
T Consensus 323 ~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 323 KFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp SEEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CEEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 999988754 6899999988653 3444443 789999999999877 44444 46666554
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=5.4e-28 Score=227.59 Aligned_cols=282 Identities=11% Similarity=0.086 Sum_probs=203.2
Q ss_pred CcceeEEEeCCCCcEEEEEec-CC-----eEEEEEecCCceEEEEEeccCC----------------------CceEEEE
Q 016982 10 AQCITCHAWSPDHAMVAFCPN-NN-----EVHIYKLIQEKWEKLHVLQKHD----------------------QIVSGID 61 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~-dg-----~i~i~~~~~~~~~~~~~~~~~~----------------------~~v~~~~ 61 (379)
...|.+++|||||++|++++. |+ .|++||+.+++...+.....+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999988 88 8999999987433333322222 3478999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeccCC---ceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEE
Q 016982 62 WSVRSNRIVTVSHDRNSYVWNQEGS---EWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKL 138 (379)
Q Consensus 62 ~~~~~~~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~ 138 (379)
|+|||++|++++. +.|.+||+.++ +... +..+...+..++|+|||++|++++ ++.|++||+.++. ..+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~---l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~---~~~~ 187 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ---LTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR---QMQL 187 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCB---CCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE---EEEC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEE---cccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC---EEEe
Confidence 9999999999886 89999999987 5322 245678899999999999999988 4689999988765 2222
Q ss_pred EeecCCcC----------------EEEEEEcCCCcEEEEeeCCC---------------------------------eEE
Q 016982 139 IRKRHDSS----------------VTSVAWHPNNVFLATTSTDG---------------------------------KCR 169 (379)
Q Consensus 139 ~~~~~~~~----------------v~~~~~~p~~~~l~~~~~d~---------------------------------~i~ 169 (379)
. ..+... +..++|+|||++|++++.|+ .|.
T Consensus 188 ~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 188 T-ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp C-CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred c-cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 2 222222 47799999999999987665 677
Q ss_pred EEeccccccccccccCCCccCCcc-cceEEEee--cCCcceEEEEECCCCCEEEEEcC-----CCeEEEEECCCCCceee
Q 016982 170 VFSTFIKGVDIKEKKEGTSSDTKF-GEQILQLD--LSFSWAFGVKWSPSGNTLAYVGH-----NSMIYFVDDVGPSPLAQ 241 (379)
Q Consensus 170 v~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~-----d~~i~v~d~~~~~~~~~ 241 (379)
+||+ .+ ++...... .+...+..++| |||++|++++. +..|++||+.+++. ..
T Consensus 267 ~~d~------------------~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~-~~ 326 (741)
T 2ecf_A 267 VISP------------------AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ-RV 326 (741)
T ss_dssp EECS------------------STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE-EE
T ss_pred EEEC------------------CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce-EE
Confidence 7775 33 33322221 36678999999 99999987653 57899999988763 34
Q ss_pred eeeeecC----CeeeEEEecCCcEEEE-EeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccc
Q 016982 242 NVAFRDL----PLRDVLFVSEKMVIGV-GFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKY 316 (379)
Q Consensus 242 ~~~~~~~----~i~~~~~s~~~~~l~~-~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (379)
.+..+.. .+..++|+|||+++++ +.++...+|..+..+.. .
T Consensus 327 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~---~------------------------------- 372 (741)
T 2ecf_A 327 LAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKA---A------------------------------- 372 (741)
T ss_dssp EEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCE---E-------------------------------
T ss_pred EEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCCe---e-------------------------------
Confidence 4444432 4568999999997774 45667888877643321 1
Q ss_pred cCcccccccccccccccccceeeeeeecccCCcccceE-EEeecCc--eEEEEeCCC
Q 016982 317 GVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRF-TTSGLDG--KIVTWDLES 370 (379)
Q Consensus 317 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l-~t~~~Dg--~v~iW~~~~ 370 (379)
.+..|...|..+..|++++ +.| ++++.|+ .+++|++..
T Consensus 373 ------------~l~~~~~~v~~~~~~s~dg----~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 373 ------------ALTHGNWSVDELLAVDEKA----GLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp ------------ESCCSSSCEEEEEEEETTT----TEEEEEECSSCTTCBEEEEEET
T ss_pred ------------eeeecceEEEeEeEEeCCC----CEEEEEEeCCCCceEEEEEEEc
Confidence 1235666777774477776 655 5566666 899999864
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=6.4e-27 Score=210.54 Aligned_cols=280 Identities=10% Similarity=0.102 Sum_probs=208.8
Q ss_pred EeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec--cCCceeeeEEe
Q 016982 17 AWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ--EGSEWVPTLVI 94 (379)
Q Consensus 17 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~--~~~~~~~~~~~ 94 (379)
+|+|++.++++++.++.|.+||..++ +.+.++..+.. +..++|+|+|++|++++.|+.|.+||+ .+++.+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~--~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~- 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK--KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK- 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC--CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc--eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-
Confidence 48899999999999999999999887 56777774333 889999999999999999999999999 7777555443
Q ss_pred ecCCCceeEEEECC----CCCEEEEEeC-CCeEEEEEeecCCceeEEEEEee-c--------C-CcCEEEEEEcCCCc-E
Q 016982 95 LRLNRAALCVQWSP----KENKFAVGSG-AKTVCICYYEQENNWWVSKLIRK-R--------H-DSSVTSVAWHPNNV-F 158 (379)
Q Consensus 95 ~~~~~~v~~~~~~~----~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~-~--------~-~~~v~~~~~~p~~~-~ 158 (379)
+...+..++|+| +|+++++++. +++|.+||..+.+ +.+.+.. + | ...+..+.++|++. +
T Consensus 220 --~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~---~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 220 --IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE---PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp --CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC---EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred --cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc---cceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 456789999999 9999999885 8999999988776 3444411 1 2 23789999999774 5
Q ss_pred EEEeeCCCeEEEEeccccccccccccCCCccCCcccceE--EEeecCCcceEEEEECCCCCEEEEE-cCCCeEEEEECCC
Q 016982 159 LATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI--LQLDLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVG 235 (379)
Q Consensus 159 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~ 235 (379)
+++...++.|.+||+. ..+.+ ..+. +...+..+.|+|+|++|+++ ..+++|.+||..+
T Consensus 295 ~vs~~~~g~i~vvd~~------------------~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 295 IVNVKETGKVLLVNYK------------------DIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp EEEETTTTEEEEEECT------------------TSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEECCCCeEEEEEec------------------CCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 5667778999999972 22222 2333 35567889999999987655 4688999999998
Q ss_pred CCceeeeeee----ecCCeeeEEEecC-CcEEEEE--eCCCeEEEEecCCC----cEEEEEEecccccCCCCCccCCCcc
Q 016982 236 PSPLAQNVAF----RDLPLRDVLFVSE-KMVIGVG--FDCNPMVFAADETG----IWTFIKFLDERKTSSSGPKYGSQFS 304 (379)
Q Consensus 236 ~~~~~~~~~~----~~~~i~~~~~s~~-~~~l~~~--~d~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
++ +...+.. |......+ ++|+ |.+++++ .++.|.+|+.+..+ .|++.+.+
T Consensus 356 g~-l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l----------------- 416 (543)
T 1nir_A 356 RR-LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL----------------- 416 (543)
T ss_dssp TE-EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-----------------
T ss_pred Ce-EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-----------------
Confidence 75 4455553 33222222 4676 6666665 47899999987632 15554422
Q ss_pred cccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEee-------cCceEEEEeCCCcccc
Q 016982 305 EAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG-------LDGKIVTWDLESQEDL 374 (379)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~-------~Dg~v~iW~~~~~~~~ 374 (379)
.+|.+.+..|+ ++|++ ++|++++ .|++|.+||+.+++..
T Consensus 417 --------------------------~~~g~~~~~v~-~~pdg----~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 417 --------------------------QGQGGGSLFIK-THPKS----SHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp --------------------------ECSCSCCCCEE-CCTTC----CEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred --------------------------EcCCCCceEEE-cCCCC----CcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 46777788888 66665 8999987 3789999999988765
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=3.1e-25 Score=189.30 Aligned_cols=276 Identities=12% Similarity=0.071 Sum_probs=186.2
Q ss_pred EEEEEecCCeEEEEEec-CCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-CeEEEEecc--CCceeeeEEeecCCC
Q 016982 24 MVAFCPNNNEVHIYKLI-QEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-RNSYVWNQE--GSEWVPTLVILRLNR 99 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~vw~~~--~~~~~~~~~~~~~~~ 99 (379)
++++++.++.|++|++. +++.+.+..+ .+...+.+++|+|++++|++++.+ +.|.+|++. +++........ ...
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LPG 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CSS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-cCC
Confidence 34444779999999996 3333444444 366788999999999999888876 899999998 55543333322 234
Q ss_pred ceeEEEECCCCCEEEEEeC-CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee-CCCeEEEEeccccc
Q 016982 100 AALCVQWSPKENKFAVGSG-AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS-TDGKCRVFSTFIKG 177 (379)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~v~d~~~~~ 177 (379)
.+..++|+|+++++++++. ++.|.+||+..+........+ .....+.+++|+|+++++++++ .++.|.+||+.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~--- 159 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV--EGLDGCHSANISPDNRTLWVPALKQDRICLFTVS--- 159 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC---
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc--cCCCCceEEEECCCCCEEEEecCCCCEEEEEEec---
Confidence 8899999999998877765 889999999632211123333 3345688999999999888777 89999999972
Q ss_pred cccccccCCCccCCcccceE--E--Eeec-CCcceEEEEECCCCCEEEEE-cCCCeEEEEECCC--CCce-eeeeee---
Q 016982 178 VDIKEKKEGTSSDTKFGEQI--L--QLDL-SFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVG--PSPL-AQNVAF--- 245 (379)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~--~--~~~~-~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~--~~~~-~~~~~~--- 245 (379)
..++.. . .+.. ....+..++|+|++++|+++ ..++.|.+||+.. +... ......
T Consensus 160 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 160 --------------DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp --------------TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred --------------CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc
Confidence 112221 1 2222 23467889999999977655 4889999999854 2211 112211
Q ss_pred e---cCCeeeEEEecCCcEEE-EE-eCCCeEEEEecC-CCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCc
Q 016982 246 R---DLPLRDVLFVSEKMVIG-VG-FDCNPMVFAADE-TGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVG 319 (379)
Q Consensus 246 ~---~~~i~~~~~s~~~~~l~-~~-~d~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (379)
. ...+..++|+|+|++|+ +. .++.+.+|+.+. .+........
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------------------- 273 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ-------------------------------- 273 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE--------------------------------
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee--------------------------------
Confidence 0 12456799999998776 33 577899999874 2223333211
Q ss_pred ccccccccccccccccceeeeeeecccCCcccceEEEee-cCceEEEEeCC
Q 016982 320 NDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG-LDGKIVTWDLE 369 (379)
Q Consensus 320 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~-~Dg~v~iW~~~ 369 (379)
..+.. +.+++ +++++ ++|++++ .|+.|.+|++.
T Consensus 274 -----------~~~~~-~~~~~-~s~dg----~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 274 -----------PTETQ-PRGFN-VDHSG----KYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp -----------ECSSS-CCCEE-ECTTS----SEEEEECTTTCEEEEEEEE
T ss_pred -----------cCCCc-cceEE-ECCCC----CEEEEecCCCCeEEEEEEc
Confidence 12222 77888 77666 7677666 78999999654
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=1.8e-27 Score=223.50 Aligned_cols=226 Identities=10% Similarity=0.064 Sum_probs=164.0
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCC---ceEEEEEcCCCCEEEEEeCC---------CeE
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQ---IVSGIDWSVRSNRIVTVSHD---------RNS 78 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i 78 (379)
..+.+++|+|||+++++ +.||.|++||+.++ +....+..|.. .|.+++|||||++|++++.+ +.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g--~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCC--cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 45788999999997766 68999999999987 44555666654 48999999999999998764 778
Q ss_pred EEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCc-------------
Q 016982 79 YVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDS------------- 145 (379)
Q Consensus 79 ~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~------------- 145 (379)
.+||+.+++.........+...+..++|+|||+.|++++. +.|++||+.++.. .+.. ..+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~---~~~~-~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA---IRVV-STGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC---EEEE-CCCBTTTEEEEECCHHHH
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce---EEEe-cCCCCCceECcccceeEE
Confidence 8999998874222211223445889999999999999986 7899999988763 3333 33222
Q ss_pred -----CEEEEEEcCCCcEEEEeeCCC----------------------------------eEEEEeccccccccccccCC
Q 016982 146 -----SVTSVAWHPNNVFLATTSTDG----------------------------------KCRVFSTFIKGVDIKEKKEG 186 (379)
Q Consensus 146 -----~v~~~~~~p~~~~l~~~~~d~----------------------------------~i~v~d~~~~~~~~~~~~~~ 186 (379)
.+.+++|+|||++|++++.++ .|++||+
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~------------- 235 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL------------- 235 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES-------------
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC-------------
Confidence 237899999999999887543 5677765
Q ss_pred CccCCcccceEEEeecC------CcceEEEEECCCCCEEEEEc----CCCeEEEEECCCCCceeeeeee-ecCCe----e
Q 016982 187 TSSDTKFGEQILQLDLS------FSWAFGVKWSPSGNTLAYVG----HNSMIYFVDDVGPSPLAQNVAF-RDLPL----R 251 (379)
Q Consensus 187 ~~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l~~~~----~d~~i~v~d~~~~~~~~~~~~~-~~~~i----~ 251 (379)
.+++....+..+ ...+..++|+|||++|++.+ .+..|++||+.+++. ...+.. +...+ .
T Consensus 236 -----~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~ 309 (723)
T 1xfd_A 236 -----NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC-TKKHEDESEAWLHRQNE 309 (723)
T ss_dssp -----SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE-EEEEEEECSSCCCCCCC
T ss_pred -----CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc-eEEEEeccCCEEeccCC
Confidence 333333444332 56789999999999887664 236799999988763 233333 23333 3
Q ss_pred eEEEecCCcEEE
Q 016982 252 DVLFVSEKMVIG 263 (379)
Q Consensus 252 ~~~~s~~~~~l~ 263 (379)
.++|+|||+.|+
T Consensus 310 ~~~~spdg~~l~ 321 (723)
T 1xfd_A 310 EPVFSKDGRKFF 321 (723)
T ss_dssp CCEECTTSCSEE
T ss_pred CceEcCCCCeEE
Confidence 899999999665
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=2.3e-26 Score=192.06 Aligned_cols=258 Identities=11% Similarity=0.068 Sum_probs=186.9
Q ss_pred EecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC-CceeeeEEeecC-CCceeEEE
Q 016982 28 CPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG-SEWVPTLVILRL-NRAALCVQ 105 (379)
Q Consensus 28 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~-~~~v~~~~ 105 (379)
++.++.|++||+.++ +. ..+..|...|.+++|+|++++|++++ ++.|.+||+.+ ++..... ..+ ...+.+++
T Consensus 18 ~~~~~~i~~~d~~~~--~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~ 91 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTR--KM-RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD--TGFATICNNDHG 91 (297)
T ss_dssp CCCCEEEEEEETTTT--EE-EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC--CTTCCCBCSCCE
T ss_pred CCcceeEEEEeCCCC--ce-eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec--cccccccccceE
Confidence 456899999999987 33 34556888999999999999999987 78999999998 7644332 233 46789999
Q ss_pred ECCCCCEEEEEe--CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEE-EeeCCCeEEEEecccccccccc
Q 016982 106 WSPKENKFAVGS--GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLA-TTSTDGKCRVFSTFIKGVDIKE 182 (379)
Q Consensus 106 ~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d~~i~v~d~~~~~~~~~~ 182 (379)
|+|++++|++++ .++...+|.++.... ....+ .+...+..++|+|++++|+ ++..++.+++|++.
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~--~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~-------- 159 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGG--TPRLM--TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD-------- 159 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCC--CCEEC--CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE--------
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCC--ceEEe--ecCCCccceEECCCCCEEEEEECCCCceEEEEEE--------
Confidence 999999999998 445677777764332 12333 2334589999999999877 67789999999862
Q ss_pred ccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcE
Q 016982 183 KKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMV 261 (379)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 261 (379)
........+..+...+.+++|+|+|++|++++ .++.+++|++.........+..+...+..++|+|+|++
T Consensus 160 ---------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 160 ---------IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp ---------TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE
T ss_pred ---------CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE
Confidence 12233455666777899999999999887765 58899999876333344666667778899999999998
Q ss_pred EE-EEeC-----------CCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccccccccccc
Q 016982 262 IG-VGFD-----------CNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTR 329 (379)
Q Consensus 262 l~-~~~d-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (379)
|+ ++.+ ..+.+|+........+. .
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~--------------------------------------------~ 266 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF--------------------------------------------D 266 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE--------------------------------------------E
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCceeee--------------------------------------------c
Confidence 87 4443 34667765543322211 1
Q ss_pred ccccccceeeeeeecccCCcccceEEEeecCc
Q 016982 330 GGTHVNCINCIVPLREAGSSRITRFTTSGLDG 361 (379)
Q Consensus 330 ~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg 361 (379)
+.+|...+.+++ |++++ ++|++++.|.
T Consensus 267 ~~~~~~~~~~~~-~spdg----~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFGGQGTMNSPN-WSPDG----DEFAYVRYFP 293 (297)
T ss_dssp EEESTTTSCSCC-BCTTS----SEEEEEEECC
T ss_pred cCCCCcccccce-ECCCC----CEEEEEEecc
Confidence 135777888888 77666 8888887663
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=7.7e-25 Score=186.89 Aligned_cols=262 Identities=12% Similarity=0.061 Sum_probs=183.9
Q ss_pred eccCcceeEEEeCCCCcEEEEEecC-CeEEEEEec--CCceEEEEEeccCCCceEEEEEcCCCCEEEEEeC-CCeEEEEe
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNN-NEVHIYKLI--QEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH-DRNSYVWN 82 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~ 82 (379)
..+...+.+++|+|+|++|++++.+ +.|.+|++. +++...+..+..+. .+..++|+|++++|++++. ++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 4567789999999999999888876 999999998 55556666666544 7889999999998876664 78899999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCeEEEEEeec-CCceeEEE--EEeecCCcCEEEEEEcCCCcE
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GAKTVCICYYEQ-ENNWWVSK--LIRKRHDSSVTSVAWHPNNVF 158 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~~~~~-~~~~~~~~--~~~~~~~~~v~~~~~~p~~~~ 158 (379)
+..+..............+.+++|+|+++.+++++ .++.|.+||+.. +.. .... .........+..++|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL-VAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE-EEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce-eeecccccccCCCCCcceEEECCCCCE
Confidence 95433222222233455689999999999888887 799999999987 431 1111 221234457889999999987
Q ss_pred EEEee-CCCeEEEEeccccccccccccCCCccCCcccc--eEEEe---ecC---CcceEEEEECCCCCEEE-EEcCCCeE
Q 016982 159 LATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQL---DLS---FSWAFGVKWSPSGNTLA-YVGHNSMI 228 (379)
Q Consensus 159 l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~---~~~v~~~~~sp~~~~l~-~~~~d~~i 228 (379)
+++++ .++.+.+|++.. ..++ ....+ ... ...+..++|+|+|++|+ +...++.|
T Consensus 192 l~~~~~~~~~i~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i 255 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKD----------------PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLI 255 (343)
T ss_dssp EEEEETTTTEEEEEESSC----------------TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEeCCCCEEEEEEecC----------------CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEE
Confidence 75554 789999999721 0111 11111 111 23567899999998877 45578999
Q ss_pred EEEECCC--CC-ceeeeeeeecCCeeeEEEecCCcEEEEE--eCCCeEEEEecC-CCcEEEEEEe
Q 016982 229 YFVDDVG--PS-PLAQNVAFRDLPLRDVLFVSEKMVIGVG--FDCNPMVFAADE-TGIWTFIKFL 287 (379)
Q Consensus 229 ~v~d~~~--~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~d~~~~i~~~~~-~~~~~~~~~~ 287 (379)
.+||+.. +. ..+..+..+ ..+..++|+|+|++|+++ .++.+.+|..+. .+.+.....+
T Consensus 256 ~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 256 TVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 9999873 22 222333333 348899999999977744 468999998764 3445554433
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=4.3e-26 Score=194.21 Aligned_cols=274 Identities=11% Similarity=0.018 Sum_probs=196.0
Q ss_pred cEEEEEecCCeEEEEEecCCceEEEEEeccCCC--ceEEEEEcCCCCEEE-EEeCCCeEEEEeccCCceeeeEEeec---
Q 016982 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQ--IVSGIDWSVRSNRIV-TVSHDRNSYVWNQEGSEWVPTLVILR--- 96 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~--- 96 (379)
++|++++.++.|++||+.++ +.+..+..... .+..++|+|++++++ ++..++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCC--cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 57889999999999999887 55555543221 478999999998764 55567899999999988665554321
Q ss_pred CCCceeEEEECCCCCEEEEEe------------CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 97 LNRAALCVQWSPKENKFAVGS------------GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~------------~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
+...+..++|+|+|++++++. .++.|.+||+.+.+ ....+ . ....+.+++|+|++++|+++
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~-~-~~~~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAF-E-APRQITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEE-E-CCSSCCCEEECTTSSCEEEE--
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc---EEEEE-e-CCCCcceeEECCCCCEEEEe--
Confidence 122678899999999998886 57999999997765 33444 2 34557889999999988877
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC-C-----------------
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN-S----------------- 226 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~----------------- 226 (379)
++.|.+||+ .+++.+..+..+.. ...+.|+|+++.|+..+.. +
T Consensus 153 ~~~i~~~d~------------------~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (337)
T 1pby_B 153 GRDLHVMDP------------------EAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPAD 213 (337)
T ss_dssp SSSEEEEET------------------TTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTS
T ss_pred CCeEEEEEC------------------CCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeecccccccccc
Confidence 688999997 45565555544331 1123789998876654432 2
Q ss_pred ------eEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccC
Q 016982 227 ------MIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300 (379)
Q Consensus 227 ------~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
.|.+||+.+++.....+..+...+.+++|+|+|++++++ ++.+.+|+..... ....+
T Consensus 214 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~---~~~~~------------- 276 (337)
T 1pby_B 214 PTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNA---SIKRV------------- 276 (337)
T ss_dssp GGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTE---EEEEE-------------
T ss_pred ccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCc---Cccee-------------
Confidence 468999988764333344455678899999999998877 7889999876432 11111
Q ss_pred CCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccccccC
Q 016982 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
.....+.+++ +++++ ++|++++.|+.|++||+.+++.++.+
T Consensus 277 -------------------------------~~~~~~~~~~-~s~dg----~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 277 -------------------------------PLPHSYYSVN-VSTDG----STVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp -------------------------------ECSSCCCEEE-ECTTS----CEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred -------------------------------cCCCceeeEE-ECCCC----CEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 0112466788 77666 78888899999999999998876654
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=2.5e-26 Score=191.81 Aligned_cols=234 Identities=13% Similarity=0.134 Sum_probs=177.7
Q ss_pred ceeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecC-CceEEEEEeccC-CCceEEEEEcCCCCEEEEEe--CCCeEEE
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQ-EKWEKLHVLQKH-DQIVSGIDWSVRSNRIVTVS--HDRNSYV 80 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~i~v 80 (379)
.+..|...|.+++|+|+|++|++++ ++.|++||+.+ + +.......+ ...+.+++|+|++++|++++ .++...|
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP--SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC--SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC--CceEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 4567889999999999999999986 78999999988 6 344444455 36789999999999999988 3344455
Q ss_pred E--eccCCceeeeEEeecCCCceeEEEECCCCCEEE-EEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc
Q 016982 81 W--NQEGSEWVPTLVILRLNRAALCVQWSPKENKFA-VGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 81 w--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
| ++.++.. .. ......+..++|+|+++.|+ ++..++.+++|+++.... ....+ ..+...+.+++|+|+++
T Consensus 113 ~~~~~~~~~~---~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~-~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 113 YLLPSTGGTP---RL-MTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRL-THGEGRNDGPDYSPDGR 185 (297)
T ss_dssp EEEETTCCCC---EE-CCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEEC-CCSSSCEEEEEECTTSS
T ss_pred EEEECCCCce---EE-eecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEc-ccCCCccccceECCCCC
Confidence 5 5455542 12 22334588999999999887 677899999999875432 12333 56778899999999999
Q ss_pred EEEEee-CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC-----------
Q 016982 158 FLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN----------- 225 (379)
Q Consensus 158 ~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----------- 225 (379)
+|++++ .++.+++|++. ..+..+..+..+...+..++|+|+|++|++++.+
T Consensus 186 ~l~~~~~~~~~~~i~~~~-----------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVR-----------------VDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp EEEEEECTTSSCEEEEEE-----------------TTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred EEEEEecCCCCccEEEEC-----------------CCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 888766 58899999872 2345566677777889999999999999888765
Q ss_pred CeEEEEECCCCCce-eeeeeeecCCeeeEEEecCCcEEEEE
Q 016982 226 SMIYFVDDVGPSPL-AQNVAFRDLPLRDVLFVSEKMVIGVG 265 (379)
Q Consensus 226 ~~i~v~d~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~ 265 (379)
+.|++||+.+++.. +..+..|...+..++|+|+|++|+.+
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEE
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEE
Confidence 57999999876532 23344677889999999999988743
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=2.2e-24 Score=183.25 Aligned_cols=234 Identities=11% Similarity=0.068 Sum_probs=162.9
Q ss_pred EEeCCCCcE-EEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeC-CCeEEEEeccCCce-eeeE
Q 016982 16 HAWSPDHAM-VAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH-DRNSYVWNQEGSEW-VPTL 92 (379)
Q Consensus 16 ~~~s~~~~~-l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~-~~~~ 92 (379)
..|.+++++ +++++.++.|.+||..++ +....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL--EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC--CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc--ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 345665554 677778999999999987 4455555556666 9999999997766665 88999999998875 3333
Q ss_pred EeecCCCceeEEEECCCCCEEEEEeCCC---eEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE-eeCCCe-
Q 016982 93 VILRLNRAALCVQWSPKENKFAVGSGAK---TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT-TSTDGK- 167 (379)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~-~~~d~~- 167 (379)
..+..+..+++|+|++++++++..++ .|.+||+.+++ ....+ .......+++|+|+++++++ ...++.
T Consensus 80 --~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~---~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 80 --QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK---FISTI--PIPYDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp --EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE---EEEEE--ECCTTEEEEEECTTSSCEEEEEETTTTE
T ss_pred --ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC---eEEEE--ECCCCccceEECCCCCEEEEEecCCCce
Confidence 33445555599999999999655553 89999998776 34444 33455689999999975554 455678
Q ss_pred EEEEeccccccccccccCCCccCCcccce----EEEeecCCcceEEEEECCCCCEEEE-EcCCCeEEEEECCCCCce--e
Q 016982 168 CRVFSTFIKGVDIKEKKEGTSSDTKFGEQ----ILQLDLSFSWAFGVKWSPSGNTLAY-VGHNSMIYFVDDVGPSPL--A 240 (379)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~v~d~~~~~~~--~ 240 (379)
+.+|++. ..+.. ...+ .....+..++|+|+|+++++ +..++.|++||+.+++.. +
T Consensus 153 i~~~~~~-----------------~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~ 214 (331)
T 3u4y_A 153 VRRFKID-----------------ADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLL 214 (331)
T ss_dssp EEEEEEC-----------------TTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred EEEEEEC-----------------CCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccccee
Confidence 9999973 11111 1122 23445789999999996654 457899999999877641 3
Q ss_pred eeeeeecCCeeeEEEecCCcEEEEE--eCCCeEEEEecCC
Q 016982 241 QNVAFRDLPLRDVLFVSEKMVIGVG--FDCNPMVFAADET 278 (379)
Q Consensus 241 ~~~~~~~~~i~~~~~s~~~~~l~~~--~d~~~~i~~~~~~ 278 (379)
..+. ....+..++|+|+|++++.+ .++.+.+|+....
T Consensus 215 ~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 215 NAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred eecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 4444 34667899999999976643 3556778776543
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1e-25 Score=210.95 Aligned_cols=281 Identities=12% Similarity=0.114 Sum_probs=197.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC-----
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG----- 85 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~----- 85 (379)
..|.+++|||| +.++++ .++.|++||+.++ +. ..+..+...+.+++|+|||++|+++ .++.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--KV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--EE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--ce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccC
Confidence 56999999999 666665 4599999999887 33 3344566778999999999999985 679999999998
Q ss_pred CceeeeEEeecCCCc--------------eeEEEECCCCCEEEEEe---------------------------------C
Q 016982 86 SEWVPTLVILRLNRA--------------ALCVQWSPKENKFAVGS---------------------------------G 118 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~ 118 (379)
++..... ..+... +.++.|+|||++|++++ .
T Consensus 156 g~~~~~~--~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 156 SRAIAVT--IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCEESC--SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred CCcEEec--cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 7643322 122222 58999999999999987 3
Q ss_pred CCeEEEEEeecCCceeEEEEEe-ecCCcCEEEEEEcCCCcEEEEeeCCC-----eEEEEeccccccccccccCCCccCCc
Q 016982 119 AKTVCICYYEQENNWWVSKLIR-KRHDSSVTSVAWHPNNVFLATTSTDG-----KCRVFSTFIKGVDIKEKKEGTSSDTK 192 (379)
Q Consensus 119 d~~v~i~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~ 192 (379)
+..|++||+.++.. ..... ..+...+.+++|+|||++|++++.++ .|++||+ .
T Consensus 234 ~~~l~~~d~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~------------------~ 292 (706)
T 2z3z_A 234 HVTVGIYHLATGKT---VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDA------------------E 292 (706)
T ss_dssp EEEEEEEETTTTEE---EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEET------------------T
T ss_pred eeEEEEEECCCCce---EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC------------------C
Confidence 46788999877652 22211 24667799999999999999887765 8999996 3
Q ss_pred ccceEEEee--cCCc---ceEEEEECC--CCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeee-EEEecCCcEEE-
Q 016982 193 FGEQILQLD--LSFS---WAFGVKWSP--SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRD-VLFVSEKMVIG- 263 (379)
Q Consensus 193 ~~~~~~~~~--~~~~---~v~~~~~sp--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~- 263 (379)
+++....+. .+.. .+..++|+| +|+++++++.++.+++|++.........+..+...+.. ++|+|+|+.|+
T Consensus 293 ~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 293 TGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp TCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEE
T ss_pred CCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEE
Confidence 442222221 1222 246789999 99999999999988998876333344666666777776 79999998776
Q ss_pred EEeCC---CeEEEEecCC-CcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceee
Q 016982 264 VGFDC---NPMVFAADET-GIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINC 339 (379)
Q Consensus 264 ~~~d~---~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 339 (379)
++.+. ...+|..+.. +... . ..|...+.+
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~~~----------------------------------------------~-l~~~~~~~~ 405 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGKTK----------------------------------------------D-LTPESGMHR 405 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCCCE----------------------------------------------E-SCCSSSEEE
T ss_pred EecCCCCceEEEEEEEcCCCCce----------------------------------------------e-ccCCCceEE
Confidence 44443 2566654421 1111 0 125556788
Q ss_pred eeeecccCCcccceEEEeecC----ceEEEEeCCCcc
Q 016982 340 IVPLREAGSSRITRFTTSGLD----GKIVTWDLESQE 372 (379)
Q Consensus 340 ~~~~~~~~~~~~~~l~t~~~D----g~v~iW~~~~~~ 372 (379)
++ |++++ ++|+..+.+ +.|++||+.+++
T Consensus 406 ~~-~spdg----~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 406 TQ-LSPDG----SAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EE-ECTTS----SEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EE-ECCCC----CEEEEEecCCCCCcEEEEEECCCCe
Confidence 88 87776 777665433 569999998765
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=8.5e-24 Score=180.84 Aligned_cols=276 Identities=11% Similarity=0.034 Sum_probs=182.2
Q ss_pred CCeEEEEEecC--CceEEEEEeccCCCceEEEEEcCCCCEEEEEeC---CCeEEEEeccCCceeeeEEeecCCCceeEEE
Q 016982 31 NNEVHIYKLIQ--EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH---DRNSYVWNQEGSEWVPTLVILRLNRAALCVQ 105 (379)
Q Consensus 31 dg~i~i~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~ 105 (379)
++.|++|+++. ++...+... .+...+..++|+|+|+ |++++. ++.|.+|++.+++.........+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~-~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLL-AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE-EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeee-eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 45788887764 433333333 3446678899999998 655554 5899999998876444333344667889999
Q ss_pred ECCCCCEEEEEe-CCCeEEEEEeecCCceeEEEEEeec--------CCcCEEEEEEcCCCcEEEEeeCCCeEEEEecccc
Q 016982 106 WSPKENKFAVGS-GAKTVCICYYEQENNWWVSKLIRKR--------HDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIK 176 (379)
Q Consensus 106 ~~~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~ 176 (379)
|+|+|++|++++ .++.+.+|++...........+... ....+.+++|+|+++++++...++.|.+|++.
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~-- 170 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS-- 170 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC--
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC--
Confidence 999999888888 6899999999743322122222111 12348899999999966666678899999972
Q ss_pred ccccccccCCCccCCcccce--EEEeecC-CcceEEEEECCCCCEEEE-EcCCCeEEEEECCCC-Cce--eeeeeeec--
Q 016982 177 GVDIKEKKEGTSSDTKFGEQ--ILQLDLS-FSWAFGVKWSPSGNTLAY-VGHNSMIYFVDDVGP-SPL--AQNVAFRD-- 247 (379)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~v~~~~~sp~~~~l~~-~~~d~~i~v~d~~~~-~~~--~~~~~~~~-- 247 (379)
..++. +..+..+ ...+..++|+|+|++|++ ...++.|.+|++... ... ...+....
T Consensus 171 ---------------~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 235 (347)
T 3hfq_A 171 ---------------DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD 235 (347)
T ss_dssp ---------------TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT
T ss_pred ---------------CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC
Confidence 12221 2222222 235778999999996665 567889999998742 111 12222111
Q ss_pred ----CCeeeEEEecCCcEEE-EE-eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccc
Q 016982 248 ----LPLRDVLFVSEKMVIG-VG-FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGND 321 (379)
Q Consensus 248 ----~~i~~~~~s~~~~~l~-~~-~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (379)
..+..++|+|||++|+ +. .++.+.+|+.+..+........
T Consensus 236 ~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~---------------------------------- 281 (347)
T 3hfq_A 236 YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI---------------------------------- 281 (347)
T ss_dssp CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE----------------------------------
T ss_pred CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE----------------------------------
Confidence 3477899999999774 33 4778999998754434433221
Q ss_pred ccccccccccccccceeeeeeecccCCcccceEEEeec-CceEEEEeC--CCccc
Q 016982 322 AVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGL-DGKIVTWDL--ESQED 373 (379)
Q Consensus 322 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~-Dg~v~iW~~--~~~~~ 373 (379)
..|...+.+++ |++++ ++|++++. ++.|.+|++ .+++.
T Consensus 282 ---------~~~~~~~~~~~-~spdg----~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 282 ---------STEGDFPRDFD-LDPTE----AFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp ---------ECSSSCCCEEE-ECTTS----SEEEEEETTTTEEEEEEECTTTCCE
T ss_pred ---------ecCCCCcCeEE-ECCCC----CEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 23445577888 77776 77777765 599999954 45544
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.8e-25 Score=210.36 Aligned_cols=240 Identities=12% Similarity=0.099 Sum_probs=177.0
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..|.+++|||||++|++++. +.|++||+.++.......+..|...+..++|+|||++|++++. +.|++||+.+++...
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQ 186 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEE
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEE
Confidence 34889999999999999876 8999999987510033456678888999999999999999874 689999999886443
Q ss_pred eEEeecCCC----------------ceeEEEECCCCCEEEEEeCCC---------------------------------e
Q 016982 91 TLVILRLNR----------------AALCVQWSPKENKFAVGSGAK---------------------------------T 121 (379)
Q Consensus 91 ~~~~~~~~~----------------~v~~~~~~~~~~~l~~~~~d~---------------------------------~ 121 (379)
.. ..+.. .+..++|+|||++|++++.|+ .
T Consensus 187 ~~--~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 187 LT--ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp CC--CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred ec--cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 32 12222 147899999999999987765 7
Q ss_pred EEEEEeec-CCceeEEEEEee-cCCcCEEEEEEcCCCcEEEEeeC-----CCeEEEEeccccccccccccCCCccCCccc
Q 016982 122 VCICYYEQ-ENNWWVSKLIRK-RHDSSVTSVAWHPNNVFLATTST-----DGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194 (379)
Q Consensus 122 v~i~~~~~-~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
|.+||+.+ ++. ...... .|...+..++| |||++|++++. +..|++||+ .++
T Consensus 265 l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~------------------~~g 322 (741)
T 2ecf_A 265 LGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTL------------------ASN 322 (741)
T ss_dssp EEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEET------------------TTC
T ss_pred EEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEEC------------------CCC
Confidence 78888877 652 222211 47788999999 99999987654 567999996 455
Q ss_pred ceEEEeecCCc----ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeE-EEecCCcEEE-EEeCC
Q 016982 195 EQILQLDLSFS----WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDV-LFVSEKMVIG-VGFDC 268 (379)
Q Consensus 195 ~~~~~~~~~~~----~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~-~~~d~ 268 (379)
+....+..+.. .+..++|+|||+++++++.++.++||.+..... ...+..+...+..+ .|+|+|+.|+ ++.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 323 QQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp CEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred ceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCC
Confidence 55555444332 346899999999989999999877876653333 46677677778887 5999998765 44433
Q ss_pred ---CeEEEEecC
Q 016982 269 ---NPMVFAADE 277 (379)
Q Consensus 269 ---~~~i~~~~~ 277 (379)
.+.+|..+.
T Consensus 402 ~~~~~~l~~~~~ 413 (741)
T 2ecf_A 402 SARESQIYAVPL 413 (741)
T ss_dssp CTTCBEEEEEET
T ss_pred CCceEEEEEEEc
Confidence 678887654
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=3.9e-24 Score=183.36 Aligned_cols=242 Identities=12% Similarity=0.034 Sum_probs=180.5
Q ss_pred cCcceeEEEeCCCCcEEEEEec-------CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEE-EeCCCeEEE
Q 016982 9 FAQCITCHAWSPDHAMVAFCPN-------NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVT-VSHDRNSYV 80 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v 80 (379)
....+..++|+|+++++++++. ++.|.+||..++ +.+..+.. ...+..++|+|++++++. ...++.|.+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 3567889999999998888763 568999999887 45555543 345788999999986654 455789999
Q ss_pred EeccCCceeeeEEeecCC-------CceeEEEECCCCCEEEEEe--CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEE
Q 016982 81 WNQEGSEWVPTLVILRLN-------RAALCVQWSPKENKFAVGS--GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVA 151 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 151 (379)
||..+++....+...... ..+.+++|+|+++.+++++ .++.|.+||..+.+ ....+ ..+...+.+++
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~---~~~~~-~~~~~~~~~~~ 191 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK---LKTAI-QNTGKMSTGLA 191 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE---EEEEE-CCCCTTCCCCE
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc---eEEEe-cCCCCccceEE
Confidence 999999866665432111 1268899999999888776 47889999998776 34444 33555678899
Q ss_pred EcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec----CCcceEEEEECCCCCEEEEEcC-CC
Q 016982 152 WHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL----SFSWAFGVKWSPSGNTLAYVGH-NS 226 (379)
Q Consensus 152 ~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~-d~ 226 (379)
|+|+++++++++.++.+.+||+ .+++.+..+.. +...+..++|+|+++++++++. ++
T Consensus 192 ~s~dg~~l~~~~~~~~i~~~d~------------------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 192 LDSEGKRLYTTNADGELITIDT------------------ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp EETTTTEEEEECTTSEEEEEET------------------TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred ECCCCCEEEEEcCCCeEEEEEC------------------CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 9999999999999999999996 55666655543 4456788999999998776654 59
Q ss_pred eEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EE-eCCCeEEEEecCC
Q 016982 227 MIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VG-FDCNPMVFAADET 278 (379)
Q Consensus 227 ~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~-~d~~~~i~~~~~~ 278 (379)
.|.+||+.+++. ...+... . ...++|+|+|+++. +. .++.+.+|+....
T Consensus 254 ~v~~~d~~~~~~-~~~~~~~-~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 254 EVLVVDTRNGNI-LAKVAAP-E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEEEETTTCCE-EEEEECS-S-CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEECCCCcE-EEEEEcC-C-CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 999999988763 3444432 2 36799999998554 44 4778888886543
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=5.4e-24 Score=182.09 Aligned_cols=254 Identities=11% Similarity=0.047 Sum_probs=175.4
Q ss_pred eccCcceeEEEeCCCCcEEEEEec---CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEe
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPN---NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWN 82 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~ 82 (379)
..+...+..++|+|+|+ |++++. ++.|++|++.+++.+.+..+..+...+..++|+|+|++|++++ .++.+.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34556788899999999 554443 6899999998876666666666777889999999999888887 678999999
Q ss_pred cc-CCceeeeEEeec---------CCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEE
Q 016982 83 QE-GSEWVPTLVILR---------LNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAW 152 (379)
Q Consensus 83 ~~-~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 152 (379)
+. ++.......... ....+.+++|+|+|+++++...++.|.+|++...........+..........++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 96 333222222111 11247889999999966666668899999998332211122221223346788999
Q ss_pred cCCCcEEEE-eeCCCeEEEEeccccccccccccCCCccCCcccc--eEEEeecCC------cceEEEEECCCCCEEE-EE
Q 016982 153 HPNNVFLAT-TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQLDLSF------SWAFGVKWSPSGNTLA-YV 222 (379)
Q Consensus 153 ~p~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~v~~~~~sp~~~~l~-~~ 222 (379)
+|+|+++++ ...++.+.+|++.. ..++ .+..+.... ..+..++|+|+|++|+ +.
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDT----------------QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEET----------------TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEecC----------------CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 999996655 55688999999731 0122 122222211 4588999999999875 45
Q ss_pred cCCCeEEEEECCCCC--ceeeeeeeecCCeeeEEEecCCcEEEEE-e-CCCeEEEEecC
Q 016982 223 GHNSMIYFVDDVGPS--PLAQNVAFRDLPLRDVLFVSEKMVIGVG-F-DCNPMVFAADE 277 (379)
Q Consensus 223 ~~d~~i~v~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~-d~~~~i~~~~~ 277 (379)
..++.|.+|++.... ..+..+..+...+..++|+|||++|+++ . ++.+.+|..+.
T Consensus 259 ~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 259 RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 568999999987332 2334444445568899999999977644 3 47899998764
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=6.9e-25 Score=213.28 Aligned_cols=278 Identities=10% Similarity=0.034 Sum_probs=209.0
Q ss_pred cCcceeEEEeC-CCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCC-ceEEEEEcCCCCEEEEEeCCCeEE-EEeccC
Q 016982 9 FAQCITCHAWS-PDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQ-IVSGIDWSVRSNRIVTVSHDRNSY-VWNQEG 85 (379)
Q Consensus 9 ~~~~i~~~~~s-~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~-vw~~~~ 85 (379)
|...+.+++|+ |||++|++++ ++.|++|+..++. ...+..|.. .+..++|+ +|+.|++++.+..+. +|++.+
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY---VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence 55679999999 9999999987 7899999998763 334667777 89999999 999999998888888 999988
Q ss_pred CceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 165 (379)
++... +..+...+..++|+|+|++|++++.++.|++||+.++. ..... ..|...+.+++|+|||++|++++.+
T Consensus 369 ~~~~~---l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~---~~~~~-~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 369 GKAEK---FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK---PTVIE-RSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CCEEE---CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEE-ECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred CCceE---ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc---eEEec-cCCCCCccceEECCCCCeEEEEecC
Confidence 76332 23567889999999999999999999999999998877 34444 5788899999999999999888765
Q ss_pred C----------eEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCC
Q 016982 166 G----------KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 166 ~----------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~ 235 (379)
+ .|++||+ ..++ +..+..|...+..++|+|+|++|++++.++...+|+...
T Consensus 442 ~~~~~~~~~~~~i~l~d~------------------~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDM------------------EGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp CSSTTCSCCEEEEEEEET------------------TTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred ccccccCCCCCeEEEEEC------------------CCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 4 8999997 3444 666777778889999999999999988876666665321
Q ss_pred CC------------------------------------------ceeeeeeeecCCeeeEEEecCCcEEEE---------
Q 016982 236 PS------------------------------------------PLAQNVAFRDLPLRDVLFVSEKMVIGV--------- 264 (379)
Q Consensus 236 ~~------------------------------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~--------- 264 (379)
.. ..+..+..+...+..++++|||++++.
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~ 582 (1045)
T 1k32_A 503 LNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAA 582 (1045)
T ss_dssp SCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHH
T ss_pred cccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccc
Confidence 10 011222334566788999999987764
Q ss_pred ---EeCCCeEEEEecC-CCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeee
Q 016982 265 ---GFDCNPMVFAADE-TGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCI 340 (379)
Q Consensus 265 ---~~d~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 340 (379)
+.+....+|..+. .+..... . ..+.++
T Consensus 583 ~~~~~~~~~~l~~~d~~~~~~~~l----------------------------------------------~---~~v~~~ 613 (1045)
T 1k32_A 583 YYQGAPEKGVLLKYDVKTRKVTEV----------------------------------------------K---NNLTDL 613 (1045)
T ss_dssp HHHCCCCCEEEEEEETTTCCEEEE----------------------------------------------E---EEEEEE
T ss_pred cccccCCCceEEEEECCCCcEEEe----------------------------------------------e---cCcceE
Confidence 2233344444332 1111110 1 356777
Q ss_pred eeecccCCcccceEEEeecCceEEEEeCCCcc
Q 016982 341 VPLREAGSSRITRFTTSGLDGKIVTWDLESQE 372 (379)
Q Consensus 341 ~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~ 372 (379)
+ +++|+ ++|++++.| .|++||+.+++
T Consensus 614 ~-~S~DG----~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 614 R-LSADR----KTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp E-ECTTS----CEEEEEETT-SCEEEEESSCT
T ss_pred E-ECCCC----CEEEEEcCC-cEEEEeCccCc
Confidence 7 88776 899998877 89999998876
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=1.1e-24 Score=199.38 Aligned_cols=231 Identities=10% Similarity=-0.009 Sum_probs=168.0
Q ss_pred CcceeEEEeCCCCcEEEEEec-CCeEEEEEecCCceEEEEEeccCC-CceEEEEEcCCCCEEEEEeC---CCeEEEEecc
Q 016982 10 AQCITCHAWSPDHAMVAFCPN-NNEVHIYKLIQEKWEKLHVLQKHD-QIVSGIDWSVRSNRIVTVSH---DRNSYVWNQE 84 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~i~vw~~~ 84 (379)
..+|++++|+|||++||+++. ||.++||++.++ +. ..+..|. ..+..++|+|| +.+++++. +....+|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--ET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT--EE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC--Cc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 568999999999999999887 999999999776 33 4445555 68999999999 77777765 4555665554
Q ss_pred C--CceeeeEEeecCCCceeEEEECCCCCE-EEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 85 G--SEWVPTLVILRLNRAALCVQWSPKENK-FAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 85 ~--~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
. ..... .+. ....+...+|+|+|+. +++...++.+.+||+.+++ ..... . +.. .+++|+|||++|++
T Consensus 97 ~~~~g~~~--~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~---~~~l~-~-~~~--~~~~~spDG~~la~ 166 (582)
T 3o4h_A 97 TSRPGEEQ--RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG---LRELA-R-LPG--FGFVSDIRGDLIAG 166 (582)
T ss_dssp TTSTTCCE--ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE---EEEEE-E-ESS--CEEEEEEETTEEEE
T ss_pred ccCCCccc--ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc---EEEee-c-CCC--ceEEECCCCCEEEE
Confidence 3 21111 212 2233456688888763 3333344555699998876 23332 2 222 78999999999998
Q ss_pred eeCC----CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCC--eEEEEECCC
Q 016982 162 TSTD----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNS--MIYFVDDVG 235 (379)
Q Consensus 162 ~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~i~v~d~~~ 235 (379)
++.+ +.|++||+ .+++ ...+..+...+..++|||||++|+++..++ .|++||+.+
T Consensus 167 ~~~~~~~~~~i~~~d~------------------~~g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNL------------------SSGG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEETTEEEEEEEET------------------TTCC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEcCCCCeEEEEEcC------------------CCCC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 8776 77999986 3344 346677788899999999999999888888 899999988
Q ss_pred CCceeeeeeeecCCeeeEE--------EecCCcEEE-EEeCCCeEEEEe
Q 016982 236 PSPLAQNVAFRDLPLRDVL--------FVSEKMVIG-VGFDCNPMVFAA 275 (379)
Q Consensus 236 ~~~~~~~~~~~~~~i~~~~--------~s~~~~~l~-~~~d~~~~i~~~ 275 (379)
+... .+..+...+..++ |+|||.+++ ++.++.+.+|..
T Consensus 228 ~~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 GSVE--DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCEE--ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CcEE--EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 7643 5566666777777 999997776 557888888886
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=5.5e-24 Score=186.52 Aligned_cols=255 Identities=10% Similarity=0.042 Sum_probs=175.7
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCc---------eEEE-----EEeccCCCceEEEEEcCCCCEEE----E
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK---------WEKL-----HVLQKHDQIVSGIDWSVRSNRIV----T 71 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~---------~~~~-----~~~~~~~~~v~~~~~~~~~~~l~----~ 71 (379)
...++.+++++++.++++++.++ +++|+...-. .... .. ..+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEec
Confidence 34588999999999999998887 8998764210 0010 11 23566899999999999999 7
Q ss_pred EeCCCeEEEEeccCC--------ceee-eEEeecCCCceeEEEECCC-CCEEEEEeCCCeEEEEEeecCCceeEEEEEee
Q 016982 72 VSHDRNSYVWNQEGS--------EWVP-TLVILRLNRAALCVQWSPK-ENKFAVGSGAKTVCICYYEQENNWWVSKLIRK 141 (379)
Q Consensus 72 ~~~d~~i~vw~~~~~--------~~~~-~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~ 141 (379)
++.|+.|++||+.+. +... .....+|...|.+++|+|+ +++|++++.||.|++||+++.. ..... .
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~---~~~~~-~ 189 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV---KVCAT-L 189 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE---EEEEE-E
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc---ceeec-c
Confidence 888999999998754 1111 1222458899999999997 8899999999999999998874 22233 5
Q ss_pred cCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec-------CCcceEEEEECC
Q 016982 142 RHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-------SFSWAFGVKWSP 214 (379)
Q Consensus 142 ~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~sp 214 (379)
.|...|.+++|+|+|++|++|+.||.|++||+ + ++....+.. |...+.+++|++
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~------------------~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP------------------T-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECT------------------T-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc------------------C-CcccccccCCcccCCCCceeEEEEEEec
Confidence 68899999999999999999999999999996 2 233333322 234799999999
Q ss_pred CCCEEEEEc-CCC------eEEEEECCCCCc----eeeeee-------eecCCeeeEEEecCCcEEEEE--eCCCeEEEE
Q 016982 215 SGNTLAYVG-HNS------MIYFVDDVGPSP----LAQNVA-------FRDLPLRDVLFVSEKMVIGVG--FDCNPMVFA 274 (379)
Q Consensus 215 ~~~~l~~~~-~d~------~i~v~d~~~~~~----~~~~~~-------~~~~~i~~~~~s~~~~~l~~~--~d~~~~i~~ 274 (379)
++.++++.+ .+| .+++|++.+... ....+. ....+-..+.+-++.+++.++ ....+.++.
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILA 330 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEE
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEE
Confidence 988876533 343 489999876531 111111 111222233344776766533 344567777
Q ss_pred ecCCC-cEEEEEEecc
Q 016982 275 ADETG-IWTFIKFLDE 289 (379)
Q Consensus 275 ~~~~~-~~~~~~~~~~ 289 (379)
....+ .|......+.
T Consensus 331 ~~~~~~~~~~~~~~d~ 346 (434)
T 2oit_A 331 RQSDQINWESWLLEDS 346 (434)
T ss_dssp ECTTSSCEEEEEECGG
T ss_pred ecCCCCccEEEecccc
Confidence 65432 4777654443
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=3.6e-24 Score=183.22 Aligned_cols=286 Identities=10% Similarity=0.004 Sum_probs=187.1
Q ss_pred eEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCC-CceEEEEEcCCCCEEE-EEeCCCeEEEEeccCCceeee
Q 016982 14 TCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHD-QIVSGIDWSVRSNRIV-TVSHDRNSYVWNQEGSEWVPT 91 (379)
Q Consensus 14 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~ 91 (379)
+.+++++++.++++++.++.|++||+.++ +.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++....
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASD--TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTT--EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCC--cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 35678899999999999999999999887 5555555433 2567899999998665 455689999999999876555
Q ss_pred EEeecC----CCceeEEEECCCCCEEEEEeCC------------CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC
Q 016982 92 LVILRL----NRAALCVQWSPKENKFAVGSGA------------KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN 155 (379)
Q Consensus 92 ~~~~~~----~~~v~~~~~~~~~~~l~~~~~d------------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 155 (379)
+..... ...+..++|+|+|+++++++.+ +.|.+||+.++......... .+...+.+++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVYLMRAADD 158 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSCCCEEECTT
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCcccceeECCC
Confidence 532111 2337899999999999998865 89999999875422122333 33446889999999
Q ss_pred CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCC------------------------cceEEEE
Q 016982 156 NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF------------------------SWAFGVK 211 (379)
Q Consensus 156 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~v~~~~ 211 (379)
++ +++++. .|.+||+ .+++.+..+..+. .....++
T Consensus 159 g~-l~~~~~--~i~~~d~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (349)
T 1jmx_B 159 GS-LYVAGP--DIYKMDV------------------KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIA 217 (349)
T ss_dssp SC-EEEESS--SEEEECT------------------TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEE
T ss_pred Cc-EEEccC--cEEEEeC------------------CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeee
Confidence 99 555443 4999997 3333333332211 0234567
Q ss_pred ECCCCCEEEEEcCCC-eEEEEECCCCCceeeeeeeecCCeeeEEEec-CCcEEEEEeCCCeEEEEecCCCcEEEEEEecc
Q 016982 212 WSPSGNTLAYVGHNS-MIYFVDDVGPSPLAQNVAFRDLPLRDVLFVS-EKMVIGVGFDCNPMVFAADETGIWTFIKFLDE 289 (379)
Q Consensus 212 ~sp~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~ 289 (379)
+++++.......... .+..+|..++......+..+...+..++|+| +|++++++ ++.+.+|+......... +
T Consensus 218 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~---~-- 291 (349)
T 1jmx_B 218 RFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKA---A-- 291 (349)
T ss_dssp EC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEE---E--
T ss_pred ecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEE---E--
Confidence 776553221111111 1223555554432233333556788999999 99998877 88899998765321111 1
Q ss_pred cccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCC
Q 016982 290 RKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLE 369 (379)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~ 369 (379)
.....+.+++ +++++ ++|++++.|+.|++||+.
T Consensus 292 ------------------------------------------~~~~~~~~~~-~s~dg----~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 292 ------------------------------------------NLDHTYYCVA-FDKKG----DKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp ------------------------------------------ECSSCCCEEE-ECSSS----SCEEEESBSSEEEEEETT
T ss_pred ------------------------------------------cCCCCccceE-ECCCC----CEEEEecCCCeEEEEecc
Confidence 0112356778 77665 778888889999999999
Q ss_pred CccccccC
Q 016982 370 SQEDLLNY 377 (379)
Q Consensus 370 ~~~~~~~~ 377 (379)
+++.+..+
T Consensus 325 ~~~~~~~~ 332 (349)
T 1jmx_B 325 TLEKVKNI 332 (349)
T ss_dssp TTEEEEEE
T ss_pred ccceeeee
Confidence 98877654
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=2.4e-24 Score=202.20 Aligned_cols=241 Identities=12% Similarity=0.144 Sum_probs=168.3
Q ss_pred ceeEEEeCCCCcEEEEEecC---------CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 12 CITCHAWSPDHAMVAFCPNN---------NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
.|.+++|||||++|++++.+ +.+++||+.+++...+.....|...+..++|||||++|++++. +.|++||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 49999999999999998764 7889999998754334334455556889999999999999886 7999999
Q ss_pred ccCCceeeeEEeecCCCc------------------eeEEEECCCCCEEEEEeCCC------------------------
Q 016982 83 QEGSEWVPTLVILRLNRA------------------ALCVQWSPKENKFAVGSGAK------------------------ 120 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~~~~~d~------------------------ 120 (379)
+.+++..... ..+... +.+++|+|||+.|++++.++
T Consensus 141 ~~~g~~~~~~--~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 141 HVGKQAIRVV--STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp SSSSCCEEEE--CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred CCCCceEEEe--cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 9988754432 222222 37899999999999987543
Q ss_pred ----------eEEEEEeecCCceeEEEEEeec------CCcCEEEEEEcCCCcEEEEeeC----CCeEEEEecccccccc
Q 016982 121 ----------TVCICYYEQENNWWVSKLIRKR------HDSSVTSVAWHPNNVFLATTST----DGKCRVFSTFIKGVDI 180 (379)
Q Consensus 121 ----------~v~i~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~p~~~~l~~~~~----d~~i~v~d~~~~~~~~ 180 (379)
.|++||+.++.. ...+ .. +...+..++|+|||+++++... +..|++||+
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~---~~~l-~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~------- 287 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTH---DLEM-MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA------- 287 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCC---CEEC-CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET-------
T ss_pred CCCCCCCCeeEEEEEECCCCce---eEEe-eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC-------
Confidence 788888877652 2233 22 3567899999999998876643 357999996
Q ss_pred ccccCCCccCCcccceEEEeec-CCcce----EEEEECCCCCEEEEE--cCCC------eEEEEECCCCCc--eeeeeee
Q 016982 181 KEKKEGTSSDTKFGEQILQLDL-SFSWA----FGVKWSPSGNTLAYV--GHNS------MIYFVDDVGPSP--LAQNVAF 245 (379)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v----~~~~~sp~~~~l~~~--~~d~------~i~v~d~~~~~~--~~~~~~~ 245 (379)
.++++...+.. +...+ ..++|+|||+.|+.. ..++ .|++||+..... ....+..
T Consensus 288 -----------~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 356 (723)
T 1xfd_A 288 -----------TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS 356 (723)
T ss_dssp -----------TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC
T ss_pred -----------CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec
Confidence 45555444432 23333 378999999977754 4666 577777323322 1234443
Q ss_pred ecCCeee-EEEecCCcEEE-EEeC---CCeEEEEecC
Q 016982 246 RDLPLRD-VLFVSEKMVIG-VGFD---CNPMVFAADE 277 (379)
Q Consensus 246 ~~~~i~~-~~~s~~~~~l~-~~~d---~~~~i~~~~~ 277 (379)
+...+.. ++|+|||+.|+ ++.+ +.+.+|..+.
T Consensus 357 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 357 GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 3344554 69999999887 4444 5677877653
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2.2e-24 Score=209.70 Aligned_cols=279 Identities=9% Similarity=-0.003 Sum_probs=210.7
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG 85 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 85 (379)
+.+|...+.++.|+++ .++++++.++.+.||.+.... .....+..|. .+..++|+|+|+.|+++. ++.|.+|++..
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g-~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~ 274 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDG-KDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDT 274 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTS-CSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTT
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCC-CcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCc
Confidence 4678899999999998 667777788999999876421 2334455554 456789999999998874 88999999955
Q ss_pred CceeeeEEeec-----------CCCceeEEEEC-CCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCc-CEEEEEE
Q 016982 86 SEWVPTLVILR-----------LNRAALCVQWS-PKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDS-SVTSVAW 152 (379)
Q Consensus 86 ~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~-~v~~~~~ 152 (379)
.... .+ .. +...+.+++|+ |+|+.|++++ ++.+.+|+...+. ...+ ..|.. .+..++|
T Consensus 275 ~~l~-~l--~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~----~~~~-~~~~~~~~~~~~~ 345 (1045)
T 1k32_A 275 EKIE-KI--EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY----VLKV-PEPLRIRYVRRGG 345 (1045)
T ss_dssp CCEE-EC--CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB----EEEC-SCCSCEEEEEECS
T ss_pred eEee-ee--ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc----eEEc-cCCCcceEEeeeE
Confidence 4322 21 22 33478999999 9999999988 7899999887665 2334 56666 8999999
Q ss_pred cCCCcEEEEeeCCCeEE-EEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEE
Q 016982 153 HPNNVFLATTSTDGKCR-VFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFV 231 (379)
Q Consensus 153 ~p~~~~l~~~~~d~~i~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~ 231 (379)
+ +++.|++++.++.+. +|++ ..++ ...+..|...+..++|+|||++|++++.++.|++|
T Consensus 346 s-dg~~l~~~s~~~~l~~~~d~------------------~~~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 346 D-TKVAFIHGTREGDFLGIYDY------------------RTGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 405 (1045)
T ss_dssp S-SEEEEEEEETTEEEEEEEET------------------TTCC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred c-CCCeEEEEECCCceEEEEEC------------------CCCC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEE
Confidence 9 999999998888888 8886 2233 33444667789999999999999999999999999
Q ss_pred ECCCCCceeeeeeeecCCeeeEEEecCCcEEEE-EeC----------CCeEEEEecCCCcEEEEEEecccccCCCCCccC
Q 016982 232 DDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGV-GFD----------CNPMVFAADETGIWTFIKFLDERKTSSSGPKYG 300 (379)
Q Consensus 232 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~d----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
|+.+++ .......|...+.+++|+|||++|+. +.+ ..+++|+..... . .
T Consensus 406 d~~tg~-~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~-~--------------- 465 (1045)
T 1k32_A 406 DLETGK-PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---I-F--------------- 465 (1045)
T ss_dssp ETTTCC-EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---E-E---------------
T ss_pred ECCCCc-eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---E-E---------------
Confidence 998876 33555567888999999999998874 333 267777765421 1 1
Q ss_pred CCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 301 SQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
.+..|...+..++ |++++ ++|++++.++..++|+...
T Consensus 466 ----------------------------~l~~~~~~~~~~~-~spdG----~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 466 ----------------------------AATTENSHDYAPA-FDADS----KNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp ----------------------------ECSCSSSBEEEEE-ECTTS----CEEEEEESCCCCCEECSSS
T ss_pred ----------------------------EeeCCCcccCCce-EcCCC----CEEEEEecccCCcCcchhc
Confidence 1245666778888 77776 8999999998888888654
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=8.3e-24 Score=198.03 Aligned_cols=231 Identities=12% Similarity=0.113 Sum_probs=160.4
Q ss_pred ceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEE-EEeccCC-----------------CceEEEEEcCCCCEEEEEe
Q 016982 12 CITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKL-HVLQKHD-----------------QIVSGIDWSVRSNRIVTVS 73 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~ 73 (379)
.+..+.|. |+.+++++.++ | +||+.+++. + ..+..|. ..|.+++|+|+ +.++.+.
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~ 99 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKS--AQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT 99 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC---------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcE--eeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE
Confidence 35557777 66677777777 8 999998743 1 2222222 46999999999 6666654
Q ss_pred CCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeec-----CCceeEEEEEeecCCcC--
Q 016982 74 HDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQ-----ENNWWVSKLIRKRHDSS-- 146 (379)
Q Consensus 74 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~-----~~~~~~~~~~~~~~~~~-- 146 (379)
++.|++||+.+++.... ..+...+.+++|+|||+.|+++ .++.|++|++.+ +.. .+.. ..+...
T Consensus 100 -~~~i~~~d~~~~~~~~l---~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~---~~~~-~~~~~~~~ 170 (706)
T 2z3z_A 100 -QGGLVGFDMLARKVTYL---FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA---IAVT-IDGTETLV 170 (706)
T ss_dssp -TTEEEEEETTTTEEEEE---ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC---EESC-SCCBTTEE
T ss_pred -CCEEEEEECCCCceEEc---cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc---EEec-cCCCCCeE
Confidence 59999999998864332 3456778999999999999995 579999999987 652 2222 222222
Q ss_pred ------------EEEEEEcCCCcEEEEee---------------------------------CCCeEEEEeccccccccc
Q 016982 147 ------------VTSVAWHPNNVFLATTS---------------------------------TDGKCRVFSTFIKGVDIK 181 (379)
Q Consensus 147 ------------v~~~~~~p~~~~l~~~~---------------------------------~d~~i~v~d~~~~~~~~~ 181 (379)
+.++.|+|||++|++++ .+..|.+||+
T Consensus 171 ~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~-------- 242 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL-------- 242 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET--------
T ss_pred cccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC--------
Confidence 47899999999999987 3467889986
Q ss_pred cccCCCccCCcccceEEEe--ecCCcceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCCceeeeeeee-cC---Ce
Q 016982 182 EKKEGTSSDTKFGEQILQL--DLSFSWAFGVKWSPSGNTLAYVGHNS-----MIYFVDDVGPSPLAQNVAFR-DL---PL 250 (379)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~-~~---~i 250 (379)
.+++..... ..+...+..++|+|||++|++++.++ .|++||+.++.......... .. .+
T Consensus 243 ----------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 243 ----------ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp ----------TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred ----------CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 333332222 24566789999999999999877665 89999998874332222222 21 24
Q ss_pred eeEEEec--CCcEEEEE-eCCCeEEEEec
Q 016982 251 RDVLFVS--EKMVIGVG-FDCNPMVFAAD 276 (379)
Q Consensus 251 ~~~~~s~--~~~~l~~~-~d~~~~i~~~~ 276 (379)
..++|+| ||++++++ .++.+.+|..+
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 6789999 99988754 56778888876
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=6.5e-22 Score=170.10 Aligned_cols=289 Identities=9% Similarity=-0.007 Sum_probs=186.8
Q ss_pred EeCCCCcEEEEEec----CCeEEEEEec--CCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC----CeEEEEeccC-
Q 016982 17 AWSPDHAMVAFCPN----NNEVHIYKLI--QEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD----RNSYVWNQEG- 85 (379)
Q Consensus 17 ~~s~~~~~l~~~~~----dg~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vw~~~~- 85 (379)
+..+...++++|+. ++.|++|++. +++...+..+ +...+..++|+|+|++|++++.+ +.|.+|++..
T Consensus 8 ~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 8 STTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp CGGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred hhCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC
Confidence 33444556777754 5689999875 4544555555 66677889999999999998875 7999999876
Q ss_pred -CceeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCeEEEEEeecCCce-eEEEEEe-e--------cCCcCEEEEEEc
Q 016982 86 -SEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GAKTVCICYYEQENNW-WVSKLIR-K--------RHDSSVTSVAWH 153 (379)
Q Consensus 86 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~~-~~~~~~~-~--------~~~~~v~~~~~~ 153 (379)
++.........+......+++ ++++|++++ .++.+.+|++...... ....... . .+...+.+++|+
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred CCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 443333333334556777888 788777776 5789999999754321 0111110 0 112346889999
Q ss_pred CCCcEEEEee-CCCeEEEEeccccccccccccCCCccCCccc----c-e------EEEeecCCcceEEEEECCCCCEEEE
Q 016982 154 PNNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG----E-Q------ILQLDLSFSWAFGVKWSPSGNTLAY 221 (379)
Q Consensus 154 p~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~----~-~------~~~~~~~~~~v~~~~~sp~~~~l~~ 221 (379)
|+++++++++ .++.+.+|++.. ..+ + . ..........+..++|+|+|++|++
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~----------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINP----------------NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECT----------------TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEEcC----------------CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEE
Confidence 9998766555 488999998731 111 1 1 1111223445789999999998877
Q ss_pred Ec-CCCeEEEEECCCCCc-eeeeee---eecCCeeeEEEecCCcEEEE-EeC--CCeEEEEec-CCCcEEEEEEeccccc
Q 016982 222 VG-HNSMIYFVDDVGPSP-LAQNVA---FRDLPLRDVLFVSEKMVIGV-GFD--CNPMVFAAD-ETGIWTFIKFLDERKT 292 (379)
Q Consensus 222 ~~-~d~~i~v~d~~~~~~-~~~~~~---~~~~~i~~~~~s~~~~~l~~-~~d--~~~~i~~~~-~~~~~~~~~~~~~~~~ 292 (379)
++ .++.|.+||+.++.. .+..+. .+......++|+|||++|++ ..+ +.+.+|..+ ..+.+......
T Consensus 228 ~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~----- 302 (361)
T 3scy_A 228 INEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ----- 302 (361)
T ss_dssp EETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE-----
T ss_pred EcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe-----
Confidence 66 689999999875531 112221 12234679999999998864 433 689999987 34444433321
Q ss_pred CCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEee-cCceEEEEeCC--
Q 016982 293 SSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG-LDGKIVTWDLE-- 369 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~-~Dg~v~iW~~~-- 369 (379)
.. ...+.+++ |++++ ++|++++ .++.|.+|++.
T Consensus 303 --------------------------------------~~-g~~~~~~~-~spdg----~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 303 --------------------------------------LT-GIHPRNFI-ITPNG----KYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp --------------------------------------EC-SSCCCEEE-ECTTS----CEEEEEETTTTEEEEEEECTT
T ss_pred --------------------------------------cC-CCCCceEE-ECCCC----CEEEEEECCCCCEEEEEEECC
Confidence 11 23466788 77776 7777776 67999996554
Q ss_pred Ccccc
Q 016982 370 SQEDL 374 (379)
Q Consensus 370 ~~~~~ 374 (379)
+++..
T Consensus 339 ~g~~~ 343 (361)
T 3scy_A 339 TGLLT 343 (361)
T ss_dssp TCCEE
T ss_pred CCcEe
Confidence 55443
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.6e-22 Score=171.81 Aligned_cols=243 Identities=11% Similarity=0.099 Sum_probs=171.6
Q ss_pred CcceeEEEeCCCCcEEEEEec-CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC---eEEEEeccC
Q 016982 10 AQCITCHAWSPDHAMVAFCPN-NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR---NSYVWNQEG 85 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vw~~~~ 85 (379)
...+ +++|+|+|+++++++. ++.|.+||+.+++. ....+..+..+..+++|+|++++|+++..++ .|.+||+.+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 4556 9999999997766655 88999999988743 1555666666666699999999998555442 899999999
Q ss_pred CceeeeEEeecCCCceeEEEECCCCCEEEEE-eCCCe-EEEEEeecCCceeEE-EEEeecCCcCEEEEEEcCCCcEEEE-
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKENKFAVG-SGAKT-VCICYYEQENNWWVS-KLIRKRHDSSVTSVAWHPNNVFLAT- 161 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-v~i~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~l~~- 161 (379)
++....+. ....+.+++|+|+|++++++ ..++. +.+|+++........ ... .........++|+|+++++++
T Consensus 118 ~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 118 NKFISTIP---IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEF-ISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp TEEEEEEE---CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEE-ECSSSSEEEEEECTTSSEEEEE
T ss_pred CCeEEEEE---CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcc-ccCCCCccceEECCCCCEEEEE
Confidence 88655542 34567899999999866555 45578 999999864421111 111 244556899999999986554
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccce---EEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCC
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ---ILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPS 237 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~ 237 (379)
+..++.|.+||+ .+++. +..+.. ...+..++|+|+|++|++++ .++.|.+||+.+++
T Consensus 194 ~~~~~~v~v~d~------------------~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 194 NLIGNSIGILET------------------QNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp ETTTTEEEEEEC------------------SSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred eCCCCeEEEEEC------------------CCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 446899999997 44444 555554 35578899999999876665 57889999998765
Q ss_pred ce-eeeeeee----cCC---eeeEEEecCCcEEE-EEe-CCCeEEEEecC
Q 016982 238 PL-AQNVAFR----DLP---LRDVLFVSEKMVIG-VGF-DCNPMVFAADE 277 (379)
Q Consensus 238 ~~-~~~~~~~----~~~---i~~~~~s~~~~~l~-~~~-d~~~~i~~~~~ 277 (379)
.. +..+..+ ..+ ...++|+|||++|+ ++. ++.+.+|+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 255 LSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred eeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 31 1222211 122 24589999999775 443 45788998765
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=202.04 Aligned_cols=233 Identities=13% Similarity=0.150 Sum_probs=160.9
Q ss_pred eEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCC---ceEEEEEcCCCCEEEEEeC---------CCeEEEE
Q 016982 14 TCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQ---IVSGIDWSVRSNRIVTVSH---------DRNSYVW 81 (379)
Q Consensus 14 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~vw 81 (379)
.+++|+|+|++++++ .|+.|++||+.++ +....+..|.. .+.+++|||||++|++++. ++.|++|
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETG--QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSC--CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCC--cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 378999999766554 6899999999987 44445554433 3899999999999998876 6899999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCE--------------
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSV-------------- 147 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v-------------- 147 (379)
|+.+++...... ....+..++|+|||+.|+++. ++.|++|++.++.. .+....++...+
T Consensus 96 d~~~g~~~~~~~---l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 96 DLSNGEFVRGNE---LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPP---FQITFNGRENKIFNGIPDWVYEEEML 168 (719)
T ss_dssp ETTTTEECCSSC---CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCC---EECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred ECCCCcccccee---cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCc---EEEecCCCcCCeEcccccceeeeecc
Confidence 999987521111 135688999999999999986 78999999987763 222112222222
Q ss_pred ---EEEEEcCCCcEEEEeeCCC----------------------------------eEEEEeccccccccccccCCCccC
Q 016982 148 ---TSVAWHPNNVFLATTSTDG----------------------------------KCRVFSTFIKGVDIKEKKEGTSSD 190 (379)
Q Consensus 148 ---~~~~~~p~~~~l~~~~~d~----------------------------------~i~v~d~~~~~~~~~~~~~~~~~~ 190 (379)
.+++|+|||++|++++.|. .|++||+.
T Consensus 169 ~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~---------------- 232 (719)
T 1z68_A 169 ATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT---------------- 232 (719)
T ss_dssp CSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS----------------
T ss_pred cCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC----------------
Confidence 4899999999999987552 67778762
Q ss_pred CcccceE--------EEeecCCcceEEEEECCCCCEEEEEcC--C--CeEEEEE----CCCCCceeeee----eeecCCe
Q 016982 191 TKFGEQI--------LQLDLSFSWAFGVKWSPSGNTLAYVGH--N--SMIYFVD----DVGPSPLAQNV----AFRDLPL 250 (379)
Q Consensus 191 ~~~~~~~--------~~~~~~~~~v~~~~~sp~~~~l~~~~~--d--~~i~v~d----~~~~~~~~~~~----~~~~~~i 250 (379)
.++.. ..+..|...+..++|+||++++++... + ..|.+|| ..+++.. ..+ ..+...+
T Consensus 233 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~ 309 (719)
T 1z68_A 233 --YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWA 309 (719)
T ss_dssp --CHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCS
T ss_pred --CCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE-EEEecccccCCceE
Confidence 22221 113356778999999999887776432 2 3588899 6665422 333 3455566
Q ss_pred e-----eEEEecCCcEEE--EE-eCCCeEEEEe
Q 016982 251 R-----DVLFVSEKMVIG--VG-FDCNPMVFAA 275 (379)
Q Consensus 251 ~-----~~~~s~~~~~l~--~~-~d~~~~i~~~ 275 (379)
. .+.|+|||+.++ .+ .++...+|..
T Consensus 310 ~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 310 GGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp SSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred ccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence 6 899999998554 23 4444444443
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=8.5e-23 Score=177.40 Aligned_cols=245 Identities=12% Similarity=0.062 Sum_probs=162.5
Q ss_pred eeccCcceeE-----EEeCCCCcEEEEEec-CC--eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCe
Q 016982 6 VHQFAQCITC-----HAWSPDHAMVAFCPN-NN--EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN 77 (379)
Q Consensus 6 ~~~~~~~i~~-----~~~s~~~~~l~~~~~-dg--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (379)
+..|...... .+|||||++|++++. ++ .|.+||+.++ +......++...+..+.|+|||+.|+.++.++.
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g--~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~ 103 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ--VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRN 103 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC--EEEECCCSSCBCSSSCEECTTSSEEEEEETTTE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC--ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCe
Confidence 3444444444 789999999998887 66 4888888876 555555566555567889999999999999999
Q ss_pred EEEEeccCCceeeeEEeecCCCceeEE--EECCCCCEEEEE----------------------eCCCeEEEEEeecCCce
Q 016982 78 SYVWNQEGSEWVPTLVILRLNRAALCV--QWSPKENKFAVG----------------------SGAKTVCICYYEQENNW 133 (379)
Q Consensus 78 i~vw~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~----------------------~~d~~v~i~~~~~~~~~ 133 (379)
|++||+.+++...... .+...+... .++|+++.++.. ..+..|.+||+.+++
T Consensus 104 l~~~d~~~g~~~~~~~--~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-- 179 (388)
T 3pe7_A 104 LMRVDLATLEENVVYQ--VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-- 179 (388)
T ss_dssp EEEEETTTCCEEEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--
T ss_pred EEEEECCCCcceeeee--chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--
Confidence 9999999987555443 333444333 348999988743 234678888888776
Q ss_pred eEEEEEeecCCcCEEEEEEcC-CCcEEEEeeCC------CeEEEEeccccccccccccCCCccCCcccceEEEeecCC--
Q 016982 134 WVSKLIRKRHDSSVTSVAWHP-NNVFLATTSTD------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF-- 204 (379)
Q Consensus 134 ~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 204 (379)
...+ ..+...+..++|+| +++.|+....+ ..|.++|+ . +.....+..+.
T Consensus 180 --~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~------------------~-~~~~~~l~~~~~~ 237 (388)
T 3pe7_A 180 --STVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE------------------D-GTNMRKVKTHAEG 237 (388)
T ss_dssp --EEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET------------------T-SCCCEESCCCCTT
T ss_pred --eEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC------------------C-CCceEEeeeCCCC
Confidence 2333 35566789999999 99988877653 26777764 1 22333343333
Q ss_pred cceEEEEECCCCCEEEEEcC-C----CeEEEEECCCCCce-eeeeeeec---CCeeeEEEecCCcEEEE----------E
Q 016982 205 SWAFGVKWSPSGNTLAYVGH-N----SMIYFVDDVGPSPL-AQNVAFRD---LPLRDVLFVSEKMVIGV----------G 265 (379)
Q Consensus 205 ~~v~~~~~sp~~~~l~~~~~-d----~~i~v~d~~~~~~~-~~~~~~~~---~~i~~~~~s~~~~~l~~----------~ 265 (379)
..+..++|+|||+.|+..+. + ..|++||+.+++.. +.....+. .....+.|+|||+.|+. .
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 35778999999998766442 1 24999999887632 11222110 11234589999987773 2
Q ss_pred eCCCeEEEEecCC
Q 016982 266 FDCNPMVFAADET 278 (379)
Q Consensus 266 ~d~~~~i~~~~~~ 278 (379)
.+..+.+|+....
T Consensus 318 ~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 318 NDPFLYVFNMKNG 330 (388)
T ss_dssp CCCEEEEEETTTT
T ss_pred CCCEEEEEeccCC
Confidence 3446667765543
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=2.2e-21 Score=166.75 Aligned_cols=248 Identities=11% Similarity=0.076 Sum_probs=171.2
Q ss_pred cCcceeEEEeCCCCcEEEEEecC----CeEEEEEecC--CceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEE
Q 016982 9 FAQCITCHAWSPDHAMVAFCPNN----NEVHIYKLIQ--EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVW 81 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw 81 (379)
+...+..++|+|+|++|++++.+ +.|.+|++.. ++.+.+.....+......+++ ++++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56677889999999999988875 7999999876 445566666656666777888 788777766 57899999
Q ss_pred eccCCceeeeE-EeecC-----------CCceeEEEECCCCCEEEEEe-CCCeEEEEEeecCCc------eeEE---EEE
Q 016982 82 NQEGSEWVPTL-VILRL-----------NRAALCVQWSPKENKFAVGS-GAKTVCICYYEQENN------WWVS---KLI 139 (379)
Q Consensus 82 ~~~~~~~~~~~-~~~~~-----------~~~v~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~------~~~~---~~~ 139 (379)
++......... ....+ ...+.+++|+|+|+++++++ .++.|.+|+++.... .... ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 10111 22357899999999776655 488999999986542 1111 122
Q ss_pred eecCCcCEEEEEEcCCCcEEEEee-CCCeEEEEeccccccccccccCCCccCCcccc--eEEEe---ecCCcceEEEEEC
Q 016982 140 RKRHDSSVTSVAWHPNNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQL---DLSFSWAFGVKWS 213 (379)
Q Consensus 140 ~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~v~~~~~s 213 (379)
..........++|+|+++++++++ .++.|.+|++. .+. .+..+ ..+......++|+
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~------------------~g~~~~~~~~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA------------------DGMLDEIQTVAADTVNAQGSGDIHLS 267 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE------------------TTEEEEEEEEESCSSCCCCEEEEEEC
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec------------------CCceEEeEEEecCCCCCCCcccEEEC
Confidence 134456678999999999887776 68999999972 222 12222 2223446899999
Q ss_pred CCCCEEEEEcC--CCeEEEEECC--CCCc-eeeeeeeecCCeeeEEEecCCcEEEEE--eCCCeEEEEecC
Q 016982 214 PSGNTLAYVGH--NSMIYFVDDV--GPSP-LAQNVAFRDLPLRDVLFVSEKMVIGVG--FDCNPMVFAADE 277 (379)
Q Consensus 214 p~~~~l~~~~~--d~~i~v~d~~--~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~--~d~~~~i~~~~~ 277 (379)
|||++|+++.. ++.|.+|++. ++.. .+..+.. ...+..++|+|+|++|+++ .++.+.+|..+.
T Consensus 268 pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 268 PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 99999877665 4899999986 2221 2233333 4568899999999977744 467888887764
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=4.3e-23 Score=180.85 Aligned_cols=203 Identities=14% Similarity=0.108 Sum_probs=152.6
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC-----------ceee--eEEeecCCCceeEEEECCCCCEEE----EE
Q 016982 54 DQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS-----------EWVP--TLVILRLNRAALCVQWSPKENKFA----VG 116 (379)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-----------~~~~--~~~~~~~~~~v~~~~~~~~~~~l~----~~ 116 (379)
...++.+++++++.++++++.++ +++|+.... .... ......+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578999999999999999887 888875321 0000 001123567899999999999999 78
Q ss_pred eCCCeEEEEEeecC--------CceeEEEEEeecCCcCEEEEEEcCC-CcEEEEeeCCCeEEEEeccccccccccccCCC
Q 016982 117 SGAKTVCICYYEQE--------NNWWVSKLIRKRHDSSVTSVAWHPN-NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGT 187 (379)
Q Consensus 117 ~~d~~v~i~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 187 (379)
+.|+.|++||++.. +.......+ .+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~-------------- 179 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQV-------------- 179 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEE--------------
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeecc-CCCCCceEEEEECCCCCCEEEEEECCCeEEEEEc--------------
Confidence 88999999998765 111112333 678999999999998 799999999999999997
Q ss_pred ccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeee-------cCCeeeEEEecCCc
Q 016982 188 SSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR-------DLPLRDVLFVSEKM 260 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~ 260 (379)
+.+..+.....|...|.+++|+|+|++|++++.||.|++||++ +. ....+..+ ...+.+++|++++.
T Consensus 180 ----~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 180 ----TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ-EKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp ----SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC-EEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred ----CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc-ccccccCCcccCCCCceeEEEEEEecCce
Confidence 4455555566788899999999999999999999999999988 33 22333322 23789999999998
Q ss_pred EEEEE--eCCC------eEEEEecCC
Q 016982 261 VIGVG--FDCN------PMVFAADET 278 (379)
Q Consensus 261 ~l~~~--~d~~------~~i~~~~~~ 278 (379)
++++. .++. +++|.....
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 88632 3322 778887643
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=9.5e-21 Score=162.91 Aligned_cols=280 Identities=11% Similarity=0.057 Sum_probs=180.0
Q ss_pred EEEEEecC--CeEEEEEec--CCceEEEEEec-cCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc-CCceeeeEEeecC
Q 016982 24 MVAFCPNN--NEVHIYKLI--QEKWEKLHVLQ-KHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE-GSEWVPTLVILRL 97 (379)
Q Consensus 24 ~l~~~~~d--g~i~i~~~~--~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~-~~~~~~~~~~~~~ 97 (379)
++++|+.. +.|.+|++. +++...+.... .....+..++|+|+|++|++++.+ .|.+|++. +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~-~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP-I 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE-C
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee-c
Confidence 45566653 578888764 44334343332 233467899999999999998887 99999997 77654333211 1
Q ss_pred CCceeEEEECCCCCE--EEEEe-------------CCCeEEEEEeecCCceeEEEEEe---ecCCcCEEEEEEcCCCcEE
Q 016982 98 NRAALCVQWSPKENK--FAVGS-------------GAKTVCICYYEQENNWWVSKLIR---KRHDSSVTSVAWHPNNVFL 159 (379)
Q Consensus 98 ~~~v~~~~~~~~~~~--l~~~~-------------~d~~v~i~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~~~~l 159 (379)
.+.+.+++|+|+|++ ++++. .++.+.+|+++.... +...+. ..+...+.+++|+|+|++|
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~spdG~~l 159 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK--LEKNVQNYEYQENTGIHGMVFDPTETYL 159 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC--EEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc--CcceEeeEEeCCCCcceEEEECCCCCEE
Confidence 134667999999994 44553 689999999974321 222221 1355678999999999988
Q ss_pred EEeeC-CCeEEEEeccccccccccccCCCccCCcccce--EEEee--cCCcceEEEEECCCCCEEEEEcC-CCeEEEEEC
Q 016982 160 ATTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ--ILQLD--LSFSWAFGVKWSPSGNTLAYVGH-NSMIYFVDD 233 (379)
Q Consensus 160 ~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~v~~~~~sp~~~~l~~~~~-d~~i~v~d~ 233 (379)
+++.. ++.|++|++. .+++. +..+. .+...+..++|+|+|++|++++. ++.|.+|++
T Consensus 160 ~~~~~~~~~v~~~~~~-----------------~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 160 YSADLTANKLWTHRKL-----------------ASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp EEEETTTTEEEEEEEC-----------------TTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEEEC-----------------CCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 87654 6799999972 12332 22333 23456899999999999887764 789999986
Q ss_pred C--CCCce--eeeee-------eecC------CeeeEE-EecCCcEEEEE-e-CC-----CeEEEEecCCCcEEEEEEec
Q 016982 234 V--GPSPL--AQNVA-------FRDL------PLRDVL-FVSEKMVIGVG-F-DC-----NPMVFAADETGIWTFIKFLD 288 (379)
Q Consensus 234 ~--~~~~~--~~~~~-------~~~~------~i~~~~-~s~~~~~l~~~-~-d~-----~~~i~~~~~~~~~~~~~~~~ 288 (379)
. +++.. ...+. ++.. .+..++ |+|||++|+++ . ++ .+.+|..+..+........
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~- 301 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL- 301 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE-
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeee-
Confidence 5 33311 11111 1111 478899 99999987643 2 23 6899988644432211100
Q ss_pred ccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecc---cCCcccceEEEeec-CceEE
Q 016982 289 ERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLRE---AGSSRITRFTTSGL-DGKIV 364 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~~~~~l~t~~~-Dg~v~ 364 (379)
...+...+..++ ++| ++ ++|++++. ++.|+
T Consensus 302 -----------------------------------------~~~~~~~~~~~a-~sp~~~dg----~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 302 -----------------------------------------SPTPTSGGHSNA-VSPCPWSD----EWMAITDDQEGWLE 335 (365)
T ss_dssp -----------------------------------------EECSSCCTTCCC-EEECTTCT----TEEEEECSSSCEEE
T ss_pred -----------------------------------------eecCCCCcccce-ecCCCcCC----CEEEEEEcCCCeEE
Confidence 011233445677 666 55 78888876 49999
Q ss_pred EEeCCCc
Q 016982 365 TWDLESQ 371 (379)
Q Consensus 365 iW~~~~~ 371 (379)
+|++...
T Consensus 336 v~~~~~~ 342 (365)
T 1jof_A 336 IYRWKDE 342 (365)
T ss_dssp EEEEETT
T ss_pred EEEEchh
Confidence 9998764
No 158
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.7e-21 Score=166.81 Aligned_cols=226 Identities=8% Similarity=0.032 Sum_probs=170.2
Q ss_pred CcceeEEEeCCCCcEEEEE-ecCCeEEEEEecCCceEEEEEeccCCC---------ceEEEEEcCCCCEEEEEe--CCCe
Q 016982 10 AQCITCHAWSPDHAMVAFC-PNNNEVHIYKLIQEKWEKLHVLQKHDQ---------IVSGIDWSVRSNRIVTVS--HDRN 77 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~ 77 (379)
...+.+++|+|+|++++++ ..++.|.+||..++ +.+..+..+.. .+.+++|+|+++++++++ .++.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG--EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESV 165 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC--eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCce
Confidence 4567889999999966554 55799999999887 44555544332 268899999999887766 4788
Q ss_pred EEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee---cCCcCEEEEEEcC
Q 016982 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK---RHDSSVTSVAWHP 154 (379)
Q Consensus 78 i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p 154 (379)
|.+||..+++....+ ..+...+..++|+|+++.+++++.++.+.+||..+++ ....+.. ++...+..++|+|
T Consensus 166 i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAI--QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK---ILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp EEEEETTTTEEEEEE--CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE---EEEEEECCCSSSCCCEEEEEEET
T ss_pred EEEEcCCCCceEEEe--cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe---EEEEEEcCCCCCCcccceEEECC
Confidence 999999998865544 2245568899999999999999999999999988776 3333312 2456788999999
Q ss_pred CCcEEEEeeC-CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEE
Q 016982 155 NNVFLATTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVD 232 (379)
Q Consensus 155 ~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d 232 (379)
+++++++++. ++.|.+||+ .+++.+..+.... ...++|+|+|+++++++ .++.|.+||
T Consensus 241 dg~~l~~~~~~~~~v~~~d~------------------~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 241 ARQRAFITDSKAAEVLVVDT------------------RNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp TTTEEEEEESSSSEEEEEET------------------TTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEC------------------CCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEE
Confidence 9987766655 589999996 5566666665433 25799999999665554 789999999
Q ss_pred CCCCCceeeeeeeecCCeeeEEEecCCcEEEE
Q 016982 233 DVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGV 264 (379)
Q Consensus 233 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 264 (379)
..+++ .+..+.. ...+.+++|+|+|++|..
T Consensus 301 ~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 301 AKSYK-VVKTFDT-PTHPNSLALSADGKTLYV 330 (353)
T ss_dssp TTTTE-EEEEEEC-CSEEEEEEECTTSCEEEE
T ss_pred CCCCe-EEEEEec-CCCCCeEEEcCCCCEEEE
Confidence 98765 3345543 446789999999996653
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=8e-21 Score=163.37 Aligned_cols=249 Identities=6% Similarity=-0.055 Sum_probs=169.2
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEec-CCceEEEEEeccCCCceEEEEEcCCCCE--EEEEe-------------C
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLI-QEKWEKLHVLQKHDQIVSGIDWSVRSNR--IVTVS-------------H 74 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~-------------~ 74 (379)
..+..++|+|+|++|++++.+ .|.+|++. +++...+.....+ +....++|+|+|++ +++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 468899999999999988887 99999997 6633222222212 23456899999984 44543 6
Q ss_pred CCeEEEEecc-CCceeeeEEee--cCCCceeEEEECCCCCEEEEEeC-CCeEEEEEee-cCCceeEEEEEee-cCCcCEE
Q 016982 75 DRNSYVWNQE-GSEWVPTLVIL--RLNRAALCVQWSPKENKFAVGSG-AKTVCICYYE-QENNWWVSKLIRK-RHDSSVT 148 (379)
Q Consensus 75 d~~i~vw~~~-~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~v~i~~~~-~~~~~~~~~~~~~-~~~~~v~ 148 (379)
++.+.+|++. +++....+... .+...+.+++|+|+|++++++.. ++.|++|+++ +++.. ....+.. .+...+.
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~-~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE-LVGSVDAPDPGDHPR 196 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE-EEEEEECSSTTCCEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE-EeeeEecCCCCCCCC
Confidence 8899999997 45544333322 24567899999999998887764 6799999998 55421 1122211 2456789
Q ss_pred EEEEcCCCcEEEEeeC-CCeEEEEeccccccccccccCCCccCCcccce------EEEee----cCCc------ceEEEE
Q 016982 149 SVAWHPNNVFLATTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ------ILQLD----LSFS------WAFGVK 211 (379)
Q Consensus 149 ~~~~~p~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----~~~~------~v~~~~ 211 (379)
.++|+|+|+++++++. ++.+.+|++.. .+++. +..+. ++.. .+..++
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~----------------~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 260 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDP----------------ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVC 260 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECT----------------TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEE
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeC----------------CCCcEEEccceEEcCCCCcCCcccccccccccccEE
Confidence 9999999998887765 78999998621 12222 11121 1121 578999
Q ss_pred -ECCCCCEEEEEcCC-C-----eEEEEECCCCCceee---eeeeecCCeeeEEEec---CCcEEEEEe--CCCeEEEEec
Q 016982 212 -WSPSGNTLAYVGHN-S-----MIYFVDDVGPSPLAQ---NVAFRDLPLRDVLFVS---EKMVIGVGF--DCNPMVFAAD 276 (379)
Q Consensus 212 -~sp~~~~l~~~~~d-~-----~i~v~d~~~~~~~~~---~~~~~~~~i~~~~~s~---~~~~l~~~~--d~~~~i~~~~ 276 (379)
|+|||++|++++.+ + .|.+|++.....+.. ....+...+..++|+| ||++|+++. ++.+.+|..+
T Consensus 261 ~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 261 ALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred EECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 99999998876543 2 899999863232322 1222445578899999 899888553 3789999987
Q ss_pred CC
Q 016982 277 ET 278 (379)
Q Consensus 277 ~~ 278 (379)
..
T Consensus 341 ~~ 342 (365)
T 1jof_A 341 DE 342 (365)
T ss_dssp TT
T ss_pred hh
Confidence 65
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=1.6e-22 Score=189.74 Aligned_cols=237 Identities=13% Similarity=0.109 Sum_probs=160.9
Q ss_pred ceeEEEeCCCCcEEEEEec---------CCeEEEEEecCCceEEE--EEeccCCCceEEEEEcCCCCEEEEEeCCCeEEE
Q 016982 12 CITCHAWSPDHAMVAFCPN---------NNEVHIYKLIQEKWEKL--HVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYV 80 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~---------dg~i~i~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 80 (379)
.|.+++|||||++||+++. ++.|++||+.+++ .+ ..+ ...+..++|||||+.|+++. ++.|++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~--~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~ 134 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE--FVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYL 134 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE--ECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc--cccceec---CcccccceECCCCCEEEEEE-CCeEEE
Confidence 3899999999999998876 6899999999873 21 222 24688999999999999886 689999
Q ss_pred EeccCCceeeeEEeecCCCc-----------------eeEEEECCCCCEEEEEeCCC-----------------------
Q 016982 81 WNQEGSEWVPTLVILRLNRA-----------------ALCVQWSPKENKFAVGSGAK----------------------- 120 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~~l~~~~~d~----------------------- 120 (379)
|++.+++..... ..++... ..+++|+|||+.|++++.|.
T Consensus 135 ~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 135 KQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp ESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 999888643321 1122221 25899999999999987652
Q ss_pred -----------eEEEEEeecCCce---eEE--EEEeecCCcCEEEEEEcCCCcEEEEeeCC----CeEEEEe----cccc
Q 016982 121 -----------TVCICYYEQENNW---WVS--KLIRKRHDSSVTSVAWHPNNVFLATTSTD----GKCRVFS----TFIK 176 (379)
Q Consensus 121 -----------~v~i~~~~~~~~~---~~~--~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----~~i~v~d----~~~~ 176 (379)
.|++||+.++... .+. ..+ ..|...+..++|+||++++++.... ..|.+|| +
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~--- 289 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI-ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDW--- 289 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH-HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSS---
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccC-CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCC---
Confidence 6778888765420 000 011 3577789999999998877764422 2477787 4
Q ss_pred ccccccccCCCccCCcccceEEEe----ecCCcceE-----EEEECCCCCEEEE--EcCCC--eEEEEECCCCCceeeee
Q 016982 177 GVDIKEKKEGTSSDTKFGEQILQL----DLSFSWAF-----GVKWSPSGNTLAY--VGHNS--MIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~-----~~~~sp~~~~l~~--~~~d~--~i~v~d~~~~~~~~~~~ 243 (379)
.++++...+ ..|...+. .+.|+|||+.|+. ...+| .|.+||+.++. ...+
T Consensus 290 ---------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~l 352 (719)
T 1z68_A 290 ---------------QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQI 352 (719)
T ss_dssp ---------------SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT--CEEC
T ss_pred ---------------CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc--eEec
Confidence 223322222 34555565 7899999996654 44454 67777876654 2455
Q ss_pred eeecCCeeeEEEecCCcEEE-EEeC-----CCeEEEEecC
Q 016982 244 AFRDLPLRDVLFVSEKMVIG-VGFD-----CNPMVFAADE 277 (379)
Q Consensus 244 ~~~~~~i~~~~~s~~~~~l~-~~~d-----~~~~i~~~~~ 277 (379)
..+...+..+.++ +++.|+ ++.+ +...+|..+.
T Consensus 353 t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 353 TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 5555667787777 777665 4444 5677777653
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=4.1e-21 Score=163.32 Aligned_cols=234 Identities=9% Similarity=0.039 Sum_probs=168.5
Q ss_pred ceeEEEeCCCCcEEE-EEecCCeEEEEEecCCceEEEEEecc-C----CCceEEEEEcCCCCEEEEEe------------
Q 016982 12 CITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEKWEKLHVLQK-H----DQIVSGIDWSVRSNRIVTVS------------ 73 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~~~------------ 73 (379)
.+.+++|+|+|++++ ++..++.|.+||+.++ +.+..+.. + ...+..++|+|+|++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTG--ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTC--CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCC--CeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccc
Confidence 588999999997664 5556789999999887 34444432 1 22567899999999998886
Q ss_pred CCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEc
Q 016982 74 HDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWH 153 (379)
Q Consensus 74 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 153 (379)
.++.|.+||+.+++....+. ....+.+++|+|++++++++ ++.|.+||+.+++ ....+ ..+.. ...+.|+
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~---~~~~~-~~~~~-~~~~~~s 182 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFE---APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT---LVEDK-PIQSW-EAETYAQ 182 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEE---CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE---EEEEE-CSTTT-TTTTBCC
T ss_pred cCceEEEEECCCCcEEEEEe---CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCc---Eeeee-ecccc-CCCceeC
Confidence 57999999999887655443 24567889999999988888 5889999998776 33444 22220 0123789
Q ss_pred CCCcEEEEeeCCC------------------------eEEEEeccccccccccccCCCccCCcccceE-EEeecCCcceE
Q 016982 154 PNNVFLATTSTDG------------------------KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI-LQLDLSFSWAF 208 (379)
Q Consensus 154 p~~~~l~~~~~d~------------------------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ 208 (379)
|+++.++..+..+ .|.+||+ .+++.. ..+..+...+.
T Consensus 183 ~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~------------------~~~~~~~~~~~~~~~~~~ 244 (337)
T 1pby_B 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL------------------ETGEMAMREVRIMDVFYF 244 (337)
T ss_dssp CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET------------------TTCCEEEEEEEECSSCEE
T ss_pred CCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC------------------CCCCceEeecCCCCCcee
Confidence 9987665544332 3577775 333332 23344556688
Q ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEecCCC
Q 016982 209 GVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAADETG 279 (379)
Q Consensus 209 ~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~~~~ 279 (379)
.++|+|+|++++++ ++.|++||+.+++. ...+. ....+.+++|+|+|++|+ ++.++.+.+|+.....
T Consensus 245 ~~~~s~dg~~l~~~--~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 245 STAVNPAKTRAFGA--YNVLESFDLEKNAS-IKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEECTTSSEEEEE--ESEEEEEETTTTEE-EEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred eEEECCCCCEEEEe--CCeEEEEECCCCcC-cceec-CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 99999999999888 79999999987653 34444 345678999999998666 6677899999987654
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=3.5e-21 Score=180.76 Aligned_cols=243 Identities=13% Similarity=0.142 Sum_probs=159.0
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCc-----eEEEEEcCCCCEEEEEeCC---------
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQI-----VSGIDWSVRSNRIVTVSHD--------- 75 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d--------- 75 (379)
.....+++|+|||++++++ |+.|++||+.++ +....+.+|... ...++|||||++|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 3457789999999999886 899999999988 445556666532 2348899999999998875
Q ss_pred CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCE--------
Q 016982 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSV-------- 147 (379)
Q Consensus 76 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v-------- 147 (379)
+.+.+||+.+++... +..+...+..++|||||+.||.+. ++.|++|++.++.. .+....++...+
T Consensus 92 ~~~~~~d~~~~~~~~---l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~---~~lt~~g~~~~~~~g~~~~v 164 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT---EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPS---YRITWTGKEDIIYNGITDWV 164 (740)
T ss_dssp EEEEEEETTTTEECC---SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCC---EECCSCCBTTTEEESBCCHH
T ss_pred eEEEEEECCCCcEEE---cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCce---EEEcCCCCccceecCccccc
Confidence 567799999997443 245677899999999999999985 68999999887662 222112222222
Q ss_pred ---------EEEEEcCCCcEEEEeeCCCe-EEEEeccccccc---------cccccCCC--------ccCCcc---cc--
Q 016982 148 ---------TSVAWHPNNVFLATTSTDGK-CRVFSTFIKGVD---------IKEKKEGT--------SSDTKF---GE-- 195 (379)
Q Consensus 148 ---------~~~~~~p~~~~l~~~~~d~~-i~v~d~~~~~~~---------~~~~~~~~--------~~~~~~---~~-- 195 (379)
..+.|+|||++|+..+.|.. +.+|++...... .+.+.... ..+..+ ++
T Consensus 165 ~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 165 YEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA 244 (740)
T ss_dssp HHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC
T ss_pred ccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc
Confidence 35899999999998764433 555544210000 00000000 000122 21
Q ss_pred eEEEee------cCCcceEEEEECCCCCEEEEEc----CCCeEEEEECCCCCc-----eeeee--eeecCCee-----eE
Q 016982 196 QILQLD------LSFSWAFGVKWSPSGNTLAYVG----HNSMIYFVDDVGPSP-----LAQNV--AFRDLPLR-----DV 253 (379)
Q Consensus 196 ~~~~~~------~~~~~v~~~~~sp~~~~l~~~~----~d~~i~v~d~~~~~~-----~~~~~--~~~~~~i~-----~~ 253 (379)
....+. .+...+..++|+|||+.++... .+..|++||+.+++. ....+ ..+...+. .+
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p 324 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEP 324 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCC
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCc
Confidence 222332 2667789999999999766543 234799999887651 11122 33444444 78
Q ss_pred EEecCCcEEE
Q 016982 254 LFVSEKMVIG 263 (379)
Q Consensus 254 ~~s~~~~~l~ 263 (379)
.|+|||+.|+
T Consensus 325 ~fspDG~~l~ 334 (740)
T 4a5s_A 325 HFTLDGNSFY 334 (740)
T ss_dssp EECTTSSEEE
T ss_pred eEcCCCCEEE
Confidence 9999998665
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=2.2e-20 Score=173.60 Aligned_cols=245 Identities=10% Similarity=-0.002 Sum_probs=170.7
Q ss_pred ceeccCcceeEEEeCCCCcEEEEE--ecCCeEEEEEecCCceEEEEEeccCCCceE---------EEEEc--CCCCE-EE
Q 016982 5 AVHQFAQCITCHAWSPDHAMVAFC--PNNNEVHIYKLIQEKWEKLHVLQKHDQIVS---------GIDWS--VRSNR-IV 70 (379)
Q Consensus 5 ~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~ 70 (379)
.+.+|...+..++|++++-+++.. +.++...||....+ .....+..|...+. ...|+ |||+. |+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD--GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT--SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC--CCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 456788999999999886666666 45788999996443 23455666666655 56665 99988 77
Q ss_pred EEeC-CCeEEEEecc--C-CceeeeEEeec-----CCCceeEEEECCCCCEEEEEeCC----------CeEEEEEeec--
Q 016982 71 TVSH-DRNSYVWNQE--G-SEWVPTLVILR-----LNRAALCVQWSPKENKFAVGSGA----------KTVCICYYEQ-- 129 (379)
Q Consensus 71 ~~~~-d~~i~vw~~~--~-~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~v~i~~~~~-- 129 (379)
.++. +..|.++++. + ++. ..+ .. +...+..++|+|||+.|++++.+ ..|++||+..
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~-~~l--~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVP-RPL--TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCC-EEC--SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEECCCCeEEEEcCCCCCCCCC-Eec--cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 6654 5667777776 3 432 222 23 45678899999999999998876 5788998877
Q ss_pred ----CCceeEEEEEee-cCCcCEEEEEEcCCCcEEEEeeCC--------CeEEEEeccccccccccccCCCccCCccc--
Q 016982 130 ----ENNWWVSKLIRK-RHDSSVTSVAWHPNNVFLATTSTD--------GKCRVFSTFIKGVDIKEKKEGTSSDTKFG-- 194 (379)
Q Consensus 130 ----~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-- 194 (379)
+. .+.+ . .+...+..++|+|||++|+..+.+ ..|++||+. .++
T Consensus 173 ~~~~~~----~~~l-~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~-----------------~~g~~ 230 (662)
T 3azo_A 173 AADRSA----VREL-SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT-----------------EDGRF 230 (662)
T ss_dssp TTCGGG----SEES-SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC-----------------TTSCE
T ss_pred cccCCc----eeEE-EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC-----------------CCCcc
Confidence 44 2344 4 455677889999999999987754 379999871 123
Q ss_pred -ceEEEeecCCcceEEEEECCCCCEEEEEcCCC--eEEEEECCCCCceeeeeeeecCC--------eeeEEEecCCcEEE
Q 016982 195 -EQILQLDLSFSWAFGVKWSPSGNTLAYVGHNS--MIYFVDDVGPSPLAQNVAFRDLP--------LRDVLFVSEKMVIG 263 (379)
Q Consensus 195 -~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~--------i~~~~~s~~~~~l~ 263 (379)
+.......+...+..++|+|||+++++++.++ .|.+||+.++. .......+... +..++|+|++++++
T Consensus 231 ~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 231 ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA-ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC-EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc-eeecccccccccCccccccCceEeEeCCCEEEE
Confidence 33333344567899999999999888888888 67777765543 22222222211 56788999999888
Q ss_pred EEeCCCeEEEEecC
Q 016982 264 VGFDCNPMVFAADE 277 (379)
Q Consensus 264 ~~~d~~~~i~~~~~ 277 (379)
++..+...+|..+.
T Consensus 310 ~~~~~~~~l~~~d~ 323 (662)
T 3azo_A 310 VHGKGAAVLGILDP 323 (662)
T ss_dssp EEBSSSCEEEEEET
T ss_pred EEEcCccEEEEEEC
Confidence 55448888887653
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=5.5e-21 Score=174.83 Aligned_cols=236 Identities=10% Similarity=0.030 Sum_probs=161.1
Q ss_pred CCceEEEEEcCCCCEEEEEeC-CCeEEEEeccCCceeeeEEeecCC-CceeEEEECCCCCEEEEEeC---CCeEEEEEee
Q 016982 54 DQIVSGIDWSVRSNRIVTVSH-DRNSYVWNQEGSEWVPTLVILRLN-RAALCVQWSPKENKFAVGSG---AKTVCICYYE 128 (379)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~v~i~~~~ 128 (379)
..+|.+++|+|||++|++++. |+++.||++.+++... +..+. ..+..++|+|| +.+++++. +....+|.++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~---lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK---LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE---CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe---eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 457999999999999999886 9999999997776332 23444 68999999999 77777664 5567788776
Q ss_pred c--CCceeEEEEEeecCCcCEEEEEEcCCCcE-EEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCc
Q 016982 129 Q--ENNWWVSKLIRKRHDSSVTSVAWHPNNVF-LATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS 205 (379)
Q Consensus 129 ~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (379)
. ... ...+ .........+|+|+++. +++.+.++.+.+||+ .+++....... ..
T Consensus 97 ~~~~g~---~~~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~------------------~~g~~~~l~~~-~~ 152 (582)
T 3o4h_A 97 TSRPGE---EQRL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYAL------------------DGGGLRELARL-PG 152 (582)
T ss_dssp TTSTTC---CEEC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEE------------------ETTEEEEEEEE-SS
T ss_pred ccCCCc---cccc--cCCCCceeeeeCCCCCeEEEEecCCCCceEEEc------------------cCCcEEEeecC-CC
Confidence 6 332 1222 22223446688888853 333344455569997 44443333332 22
Q ss_pred ceEEEEECCCCCEEEEEcCC----CeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEE-eCC--CeEEEEecCC
Q 016982 206 WAFGVKWSPSGNTLAYVGHN----SMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVG-FDC--NPMVFAADET 278 (379)
Q Consensus 206 ~v~~~~~sp~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~d~--~~~i~~~~~~ 278 (379)
.+++|||||++|++++.+ +.|++||+.+++. ..+..+...+..++|||||+.|+++ .++ .+++|+.+..
T Consensus 153 --~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~--~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL--RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC--EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred --ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc--eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 789999999999988766 7899999887763 4566777889999999999999844 445 4556655443
Q ss_pred CcEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeee-------eecccCCccc
Q 016982 279 GIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIV-------PLREAGSSRI 351 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-------~~~~~~~~~~ 351 (379)
. ... + .+|...+..++ .|++|+
T Consensus 229 ~-~~~---~-------------------------------------------~~~~~~~~~~~~~~~~~~~~spdg---- 257 (582)
T 3o4h_A 229 S-VED---L-------------------------------------------ELPSKDFSSYRPTAITWLGYLPDG---- 257 (582)
T ss_dssp C-EEE---C-------------------------------------------CCSCSHHHHHCCSEEEEEEECTTS----
T ss_pred c-EEE---c-------------------------------------------cCCCcChhhhhhccccceeEcCCC----
Confidence 2 111 0 23333333332 156555
Q ss_pred ceEEEeecCceEEEEeCCCcccc
Q 016982 352 TRFTTSGLDGKIVTWDLESQEDL 374 (379)
Q Consensus 352 ~~l~t~~~Dg~v~iW~~~~~~~~ 374 (379)
.++++++.||.+++|++ ++.+
T Consensus 258 ~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 258 RLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp CEEEEEEETTEEEEEET--TEEE
T ss_pred cEEEEEEcCCcEEEEEE--CCee
Confidence 89999999999999998 5544
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.87 E-value=8.1e-19 Score=145.66 Aligned_cols=240 Identities=14% Similarity=0.110 Sum_probs=174.0
Q ss_pred ccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEec------cCCCceEEEEE-cCCCCEEEEEeC-CCeEE
Q 016982 8 QFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQ------KHDQIVSGIDW-SVRSNRIVTVSH-DRNSY 79 (379)
Q Consensus 8 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~-~~~~~~l~~~~~-d~~i~ 79 (379)
++-..+.+++++++++++++...++.|.+||.... .+..+. ++...+..+++ .++++++++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 34467899999999998888888899999998743 344443 23456889999 467766665533 78999
Q ss_pred EEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEe-ecCCcCEEEEEEcCCCcE
Q 016982 80 VWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIR-KRHDSSVTSVAWHPNNVF 158 (379)
Q Consensus 80 vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~ 158 (379)
+|| .+++....+. ..+...+..++++|+|+++++...++.|.+|+.... ....+. ..+...+..++++|++++
T Consensus 104 ~~d-~~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 104 IYN-QYGQFVRKFG-ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN----VLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEC-TTSCEEEEEC-TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC----EEEEEECTTTCSSEEEEEECSSSEE
T ss_pred EEC-CCCcEEEEec-CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC----EEEEeCCCCccCCcEEEEECCCCCE
Confidence 999 4555443331 223457899999999998887777899999985432 233331 134457899999999998
Q ss_pred EEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC--CcceEEEEECCCCCEEEEEcCCC-eEEEEECCC
Q 016982 159 LATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS--FSWAFGVKWSPSGNTLAYVGHNS-MIYFVDDVG 235 (379)
Q Consensus 159 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~d~-~i~v~d~~~ 235 (379)
+++...++.|++||. .++.+..+..+ ...+..++++|+|+++++...++ .|.+||...
T Consensus 178 ~v~~~~~~~i~~~~~-------------------~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 178 FISDNRAHCVKVFNY-------------------EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEGGGTEEEEEET-------------------TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred EEEECCCCEEEEEcC-------------------CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 888888999999985 34445555332 35688999999999888887776 999999543
Q ss_pred CCceeeeeeeec--CCeeeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 236 PSPLAQNVAFRD--LPLRDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 236 ~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
. .+..+..+. ..+.+++++|+|++++++.++.+.+|....
T Consensus 239 -~-~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 239 -Q-LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp -C-EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred -C-EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 3 334554432 236789999999988888888999997653
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=3.3e-20 Score=161.41 Aligned_cols=220 Identities=12% Similarity=0.094 Sum_probs=147.0
Q ss_pred eeEEEeCCCCcEEEEEecC---CeEEEEEecCCceEEEEEeccCCCc-eEEEEEcCCCCEEEEEeCCCeEEEEeccCCce
Q 016982 13 ITCHAWSPDHAMVAFCPNN---NEVHIYKLIQEKWEKLHVLQKHDQI-VSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW 88 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~ 88 (379)
+..++|+|||++|++.... ..|++|++.++ +.. .+..+... ...+.|+|+|++|+.++.++.|.+||+.+++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--QAV-QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT--EEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCC--cEE-EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 7788999999998877543 47888898886 333 33333333 33488999999999999999999999998875
Q ss_pred eeeEEeecCCCceeE-------------------EEECCCCCEEEEE-----eCCCeEEEEEeecCCceeEEEEEeecCC
Q 016982 89 VPTLVILRLNRAALC-------------------VQWSPKENKFAVG-----SGAKTVCICYYEQENNWWVSKLIRKRHD 144 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~v~i~~~~~~~~~~~~~~~~~~~~ 144 (379)
..... .+...... +.|+|+++.++.. ..+..|.+||+.++. ...+ ..+.
T Consensus 115 ~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~----~~~~-~~~~ 187 (396)
T 3c5m_A 115 QVIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE----LEVI-HQDT 187 (396)
T ss_dssp EEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC----EEEE-EEES
T ss_pred EEEEe--cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc----EEee-ccCC
Confidence 44432 12222222 4578888877655 346678888887766 2333 3456
Q ss_pred cCEEEEEEcC-CCcEEEEeeCC------CeEEEEeccccccccccccCCCccCCcccceEEEeecC--CcceEEEEECCC
Q 016982 145 SSVTSVAWHP-NNVFLATTSTD------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS--FSWAFGVKWSPS 215 (379)
Q Consensus 145 ~~v~~~~~~p-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~sp~ 215 (379)
..+..+.|+| +++.|+..+.+ ..|.+||+ ..++ ...+..+ ...+..++|+|+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~------------------~~~~-~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNE------------------DGSN-VRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEET------------------TSCC-CEESSCCCTTEEEEEEEECTT
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEEC------------------CCCc-eeEeeccCCCccccceEECCC
Confidence 7789999999 78877766543 35777775 1122 2222222 235788999999
Q ss_pred CCEEEEEcCC-----CeEEEEECCCCCceeeeeeeecCCeeeEEEec-CCcEEEEE
Q 016982 216 GNTLAYVGHN-----SMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVS-EKMVIGVG 265 (379)
Q Consensus 216 ~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~ 265 (379)
|++|+..+.+ +.|++||+.++.. ..+.... ... +.|+| ||++++.+
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~-~~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLEN--EEVMVMP-PCS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCE--EEEEECC-SEE-EEEECSSSSEEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCe--EEeeeCC-CCC-CCccCCCCceEEEe
Confidence 9988776543 4599999987653 2222111 223 89999 99988753
No 167
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.85 E-value=4.3e-18 Score=145.36 Aligned_cols=218 Identities=14% Similarity=0.136 Sum_probs=147.6
Q ss_pred cceeEEEeCCCCcEEEEEe---------cCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC---C--
Q 016982 11 QCITCHAWSPDHAMVAFCP---------NNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD---R-- 76 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~---------~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-- 76 (379)
..+..+++ ||++++... .++.|++|++.+++.. .+ ..+..++|+|||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 46778888 899887753 2568999999887432 23 457889999999999887653 3
Q ss_pred eEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCC---------------------------CeEEEEEeec
Q 016982 77 NSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA---------------------------KTVCICYYEQ 129 (379)
Q Consensus 77 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~v~i~~~~~ 129 (379)
.|.+|++.+++...... ... +..+.|+|+|+.|+.++.+ ..|.+||+.+
T Consensus 86 ~l~~~~~~~g~~~~l~~---~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 86 EIWVADLETLSSKKILE---AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEETTTTEEEEEEE---ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred eEEEEECCCCceEEEEc---CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 38888888877544332 233 8999999999998888642 4677888776
Q ss_pred CCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCC-------eEEEEeccccccccccccCCCccCCcccceEEEeec
Q 016982 130 ENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG-------KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL 202 (379)
Q Consensus 130 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~-------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (379)
+. ..+.+ .. . .+..++|+|++ +++++..+. ...||.+ ..+ ....+..
T Consensus 162 ~~---~~~~l-~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~------------------d~~-~~~~l~~ 215 (347)
T 2gop_A 162 EE---VIEEF-EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIW------------------EDG-KEEKMFE 215 (347)
T ss_dssp TE---EEEEE-EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEE------------------ETT-EEEEEEE
T ss_pred Ce---EEeee-cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEe------------------CCC-ceEEecc
Confidence 65 21334 22 3 77899999999 777776542 4566764 112 2233333
Q ss_pred CCcceEEEEECCCCCEEEEEcCC--------CeEEEEECCCCCceeeeeeeecCCeee-EEEecCCcEEE-EEeCCCeEE
Q 016982 203 SFSWAFGVKWSPSGNTLAYVGHN--------SMIYFVDDVGPSPLAQNVAFRDLPLRD-VLFVSEKMVIG-VGFDCNPMV 272 (379)
Q Consensus 203 ~~~~v~~~~~sp~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~-~~~d~~~~i 272 (379)
+ ..+..+ +|+|++|+..+.+ ..|.+|| ++. .......+...+.. +.|+ ++ +++ ++.++...+
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l 287 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNL 287 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEE
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEE
Confidence 3 444444 9999998877643 4688888 332 33334445567776 8999 88 665 567778888
Q ss_pred EEec
Q 016982 273 FAAD 276 (379)
Q Consensus 273 ~~~~ 276 (379)
| .+
T Consensus 288 ~-~~ 290 (347)
T 2gop_A 288 Y-IW 290 (347)
T ss_dssp E-EE
T ss_pred E-Ec
Confidence 8 76
No 168
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=8.2e-19 Score=149.86 Aligned_cols=203 Identities=8% Similarity=0.015 Sum_probs=147.5
Q ss_pred ceeEEEeCCCCcEEE-EEecCCeEEEEEecCCceEEEEEeccC------CCceEEEEEcCCCCEEEEEeCC---------
Q 016982 12 CITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEKWEKLHVLQKH------DQIVSGIDWSVRSNRIVTVSHD--------- 75 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d--------- 75 (379)
.+..++|+|+|++++ ++..++.|.+||+.++ +....+..+ ...+..++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 121 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC--KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 121 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC--cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccc
Confidence 578999999998665 4456899999999887 444444422 2237889999999999988865
Q ss_pred ---CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeec----------
Q 016982 76 ---RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR---------- 142 (379)
Q Consensus 76 ---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~---------- 142 (379)
+.|.+||+.+++.........+...+.+++|+|+|+ +++++. .|.+||..+++. ...+...
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKY---TVALPLRNWNRKGYSAP 195 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCE---EEEECSTTCCCTTBCCC
T ss_pred cCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCce---eccccccccCCccccCc
Confidence 899999998865333333234455789999999999 555543 499998876652 2222111
Q ss_pred ---------------------------------------------------------CCcCEEEEEEcC-CCcEEEEeeC
Q 016982 143 ---------------------------------------------------------HDSSVTSVAWHP-NNVFLATTST 164 (379)
Q Consensus 143 ---------------------------------------------------------~~~~v~~~~~~p-~~~~l~~~~~ 164 (379)
+...+..++|+| ++++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-- 273 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-- 273 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--
Confidence 112456778889 99988888
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA 244 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 244 (379)
++.|.+||+ .+++.+..+.. ...+.+++|+|+|++|++++.++.|++||+.+.+. +..+.
T Consensus 274 ~~~v~~~d~------------------~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~-~~~~~ 333 (349)
T 1jmx_B 274 LNRLAKYDL------------------KQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK-VKNIK 333 (349)
T ss_dssp ESEEEEEET------------------TTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEE-EEEEE
T ss_pred cCeEEEEEC------------------ccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccce-eeeee
Confidence 889999997 55666666654 33477899999999998888899999999987653 34444
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=9.7e-18 Score=139.13 Aligned_cols=245 Identities=9% Similarity=0.037 Sum_probs=167.3
Q ss_pred cCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEee----cCCCceeEEEE-CCCCCEEEEEeC-CCeEEEE
Q 016982 52 KHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVIL----RLNRAALCVQW-SPKENKFAVGSG-AKTVCIC 125 (379)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~----~~~~~v~~~~~-~~~~~~l~~~~~-d~~v~i~ 125 (379)
++-..+.+++++++++++++...++.|.+||.. ++....+... .+...+..+++ .++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 344578899999999988888888999999987 4433333211 12346789999 567776666543 7899999
Q ss_pred EeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee--cC
Q 016982 126 YYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD--LS 203 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 203 (379)
+ ..+. ....+...+...+.+++++|+++++++...++.|.+||. .++.+..+. .+
T Consensus 106 d-~~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-------------------~g~~~~~~~~~~~ 162 (286)
T 1q7f_A 106 N-QYGQ---FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-------------------NGNVLHKFGCSKH 162 (286)
T ss_dssp C-TTSC---EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-------------------TSCEEEEEECTTT
T ss_pred C-CCCc---EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-------------------CCCEEEEeCCCCc
Confidence 8 3333 233342334467899999999998888778899999984 244444443 33
Q ss_pred CcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeee--cCCeeeEEEecCCcEEEEEeC-C-CeEEEEecCCC
Q 016982 204 FSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR--DLPLRDVLFVSEKMVIGVGFD-C-NPMVFAADETG 279 (379)
Q Consensus 204 ~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~d-~-~~~i~~~~~~~ 279 (379)
...+..++++|+|+++++...++.|++||... . .+..+..+ ...+..++++++|+++++... + .+.+|+.+...
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-C-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE
Confidence 45689999999999888878899999999754 2 33444332 246789999999998886654 3 78888743321
Q ss_pred cEEEEEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeec
Q 016982 280 IWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGL 359 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~ 359 (379)
...+ . . ......+.+++ +++++ +++++ +.
T Consensus 241 ~~~~-~---~-----------------------------------------~~~~~~~~~i~-~~~~g----~l~vs-~~ 269 (286)
T 1q7f_A 241 ISAL-E---S-----------------------------------------KVKHAQCFDVA-LMDDG----SVVLA-SK 269 (286)
T ss_dssp EEEE-E---E-----------------------------------------SSCCSCEEEEE-EETTT----EEEEE-ET
T ss_pred EEEE-c---c-----------------------------------------cCCCCcceeEE-ECCCC----cEEEE-CC
Confidence 1111 0 0 01222466788 66665 77777 57
Q ss_pred CceEEEEeCCCccc
Q 016982 360 DGKIVTWDLESQED 373 (379)
Q Consensus 360 Dg~v~iW~~~~~~~ 373 (379)
|++|++|++.....
T Consensus 270 ~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 270 DYRLYIYRYVQLAP 283 (286)
T ss_dssp TTEEEEEECSCCCC
T ss_pred CCeEEEEEcccccc
Confidence 99999999876443
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=3.4e-18 Score=160.47 Aligned_cols=237 Identities=11% Similarity=0.074 Sum_probs=154.2
Q ss_pred eEEEeCCCCcEEEEEecC---------CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 14 TCHAWSPDHAMVAFCPNN---------NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 14 ~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
..++|||||++|++++.+ +.+.+||+.++ + ...+..|...+..++|||||+.|+.+. ++.|++|++.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~ 140 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEP 140 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESST
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC--c-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECC
Confidence 458899999999998875 56779999997 2 345677788899999999999999885 6899999998
Q ss_pred CCceeeeEEeecCCCc-----------------eeEEEECCCCCEEEEEeCCC---------------------------
Q 016982 85 GSEWVPTLVILRLNRA-----------------ALCVQWSPKENKFAVGSGAK--------------------------- 120 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~~l~~~~~d~--------------------------- 120 (379)
+++.... ...++... ...+.|||||+.|+.++.|.
T Consensus 141 ~~~~~~l-t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp 219 (740)
T 4a5s_A 141 NLPSYRI-TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYP 219 (740)
T ss_dssp TSCCEEC-CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECC
T ss_pred CCceEEE-cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCC
Confidence 8763322 11222221 23589999999999875322
Q ss_pred ---------eEEEEEeec---CCceeEEEEEee-----cCCcCEEEEEEcCCCcEEEEeeC----CCeEEEEeccccccc
Q 016982 121 ---------TVCICYYEQ---ENNWWVSKLIRK-----RHDSSVTSVAWHPNNVFLATTST----DGKCRVFSTFIKGVD 179 (379)
Q Consensus 121 ---------~v~i~~~~~---~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~l~~~~~----d~~i~v~d~~~~~~~ 179 (379)
.|++||+.+ +......+.. . ++...+..++|+|||+.++.... +..|.+||+.
T Consensus 220 ~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~----- 293 (740)
T 4a5s_A 220 KAGAVNPTVKFFVVNTDSLSSVTNATSIQIT-APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD----- 293 (740)
T ss_dssp BTTSCCCEEEEEEEETTSCCSSSCCCEEEEC-CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE-----
T ss_pred CCcCcCCeeEEEEEECCCCCCCCcceEEEec-CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC-----
Confidence 466777776 5210122221 1 37778999999999997665433 3369999872
Q ss_pred cccccCCCccCCcccc----eE--EEe--ecCCcceE-----EEEECCCCCEEE-EEc-CC--CeEEEEECCCCCceeee
Q 016982 180 IKEKKEGTSSDTKFGE----QI--LQL--DLSFSWAF-----GVKWSPSGNTLA-YVG-HN--SMIYFVDDVGPSPLAQN 242 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~----~~--~~~--~~~~~~v~-----~~~~sp~~~~l~-~~~-~d--~~i~v~d~~~~~~~~~~ 242 (379)
+++ +. ..+ ..+...+. .++|+|||+.|+ ..+ .+ ..|++||+.++.. ..
T Consensus 294 -------------tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~--~~ 358 (740)
T 4a5s_A 294 -------------ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC--TF 358 (740)
T ss_dssp -------------TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC--EE
T ss_pred -------------CCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce--Ee
Confidence 222 11 111 33444443 789999999877 555 33 4688889876543 34
Q ss_pred eeeecCCeeeEEEecCCcEEE-EEeC-----CCeEEEEecC
Q 016982 243 VAFRDLPLRDVLFVSEKMVIG-VGFD-----CNPMVFAADE 277 (379)
Q Consensus 243 ~~~~~~~i~~~~~s~~~~~l~-~~~d-----~~~~i~~~~~ 277 (379)
+......+..+.+ +|++.|+ .+.. +...+|..+-
T Consensus 359 lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 359 ITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp SCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred cccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 4434455655542 4466555 4332 3455655443
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=2.2e-18 Score=160.07 Aligned_cols=233 Identities=10% Similarity=-0.032 Sum_probs=154.2
Q ss_pred EEEeC--CCCcE-EEEEec-CCeEEEEEec--C-CceEEEEEecc-----CCCceEEEEEcCCCCEEEEEeCC-------
Q 016982 15 CHAWS--PDHAM-VAFCPN-NNEVHIYKLI--Q-EKWEKLHVLQK-----HDQIVSGIDWSVRSNRIVTVSHD------- 75 (379)
Q Consensus 15 ~~~~s--~~~~~-l~~~~~-dg~i~i~~~~--~-~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d------- 75 (379)
...|+ |||+. |+.++. +..|+++++. + +. ...+.. |...+..++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~ 157 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPS 157 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTT
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCC
Confidence 45555 99998 777654 5667777765 2 42 233444 56788999999999999988876
Q ss_pred ---CeEEEEeccC------CceeeeEEee-cCCCceeEEEECCCCCEEEEEeCC--------CeEEEEEee-cCCceeEE
Q 016982 76 ---RNSYVWNQEG------SEWVPTLVIL-RLNRAALCVQWSPKENKFAVGSGA--------KTVCICYYE-QENNWWVS 136 (379)
Q Consensus 76 ---~~i~vw~~~~------~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~i~~~~-~~~~~~~~ 136 (379)
..|++||+.+ ++.. .+. .+...+..++|+|||++|+.++.+ ..|++||+. ++......
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSAVR---ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGGSE---ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred CceeEEEEEECCCCccccCCcee---EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5799999988 5522 223 455678889999999999988755 379999998 45211123
Q ss_pred EEEeecCCcCEEEEEEcCCCcEEEEeeCCC--eEEEEeccccccccccccCCCccCCcccceEEEeecCCc--------c
Q 016982 137 KLIRKRHDSSVTSVAWHPNNVFLATTSTDG--KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS--------W 206 (379)
Q Consensus 137 ~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 206 (379)
... ..+...+..++|+|||++++++..++ .|.+||+ ..++.......+.. .
T Consensus 235 ~l~-~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~------------------~~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 235 TLL-GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP------------------ATGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEE-EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT------------------TTCCEEESSCCSSBSSCCCCSTT
T ss_pred EeC-CCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC------------------CCCceeecccccccccCcccccc
Confidence 333 55678899999999999888887888 4555543 12222221221111 1
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEE--ECCCCCceeeeeeeecCCeeeEEEecCCc--EEEEE-eCCCeEEEEec
Q 016982 207 AFGVKWSPSGNTLAYVGHNSMIYFV--DDVGPSPLAQNVAFRDLPLRDVLFVSEKM--VIGVG-FDCNPMVFAAD 276 (379)
Q Consensus 207 v~~~~~sp~~~~l~~~~~d~~i~v~--d~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~-~d~~~~i~~~~ 276 (379)
+..++|+|+++++++++. +.+++| |+.++. .+.+..+...+..+ |++++. +++++ .+....+|..+
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~--~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK-GAAVLGILDPESGE--LVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE--EEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEE
T ss_pred CceEeEeCCCEEEEEEEc-CccEEEEEECCCCc--EEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEE
Confidence 457899999999999988 988888 554443 46666666666666 144444 33333 34444566554
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=6.8e-18 Score=142.86 Aligned_cols=242 Identities=12% Similarity=0.053 Sum_probs=171.2
Q ss_pred CcceeEEEeCCCCcEEEEEecC------------------------CeEEEEEecCCceEEEEEec-cCCCceEEEEEcC
Q 016982 10 AQCITCHAWSPDHAMVAFCPNN------------------------NEVHIYKLIQEKWEKLHVLQ-KHDQIVSGIDWSV 64 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~d------------------------g~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 64 (379)
-+.+.+++++|+|+++++...+ +.|.+||..+++ ....+. ++-.....++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--ILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--EEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--EEeccCCCccCCceEEEECC
Confidence 3579999999999999888766 479999998763 344433 3445788999999
Q ss_pred CCCEEEEEeCCCeEEEEeccCCc-eeeeEEe-------ecCCCceeEEEECC-CCCEEEEEe-CCCeEEEEEeecCCcee
Q 016982 65 RSNRIVTVSHDRNSYVWNQEGSE-WVPTLVI-------LRLNRAALCVQWSP-KENKFAVGS-GAKTVCICYYEQENNWW 134 (379)
Q Consensus 65 ~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~v~i~~~~~~~~~~ 134 (379)
+|+++++...++.|++|+..... .+..+.. ..+-..+..++++| +++++++.+ .++.|++|+. .+.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~--- 176 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGK--- 176 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSC---
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCC---
Confidence 99988888888999999986542 2222210 12234688999999 788887776 6899999983 333
Q ss_pred EEEEEee---------cCCcCEEEEEEcCC-CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee--c
Q 016982 135 VSKLIRK---------RHDSSVTSVAWHPN-NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD--L 202 (379)
Q Consensus 135 ~~~~~~~---------~~~~~v~~~~~~p~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 202 (379)
....+.. .+......++++|+ ++++++...++.|++|+. .+++.+..+. .
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~------------------~~G~~~~~~~~~~ 238 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT------------------DTKEFVREIKHAS 238 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET------------------TTCCEEEEECCTT
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC------------------CCCcEEEEEeccc
Confidence 2333311 12234789999998 788888888999999996 4567776663 3
Q ss_pred CCcceEEEEECCCCCEEEEE-------cCCCeEEEEECCCCCceeeeee---eecCCeeeEEEecCCcEEEEE-eCCCeE
Q 016982 203 SFSWAFGVKWSPSGNTLAYV-------GHNSMIYFVDDVGPSPLAQNVA---FRDLPLRDVLFVSEKMVIGVG-FDCNPM 271 (379)
Q Consensus 203 ~~~~v~~~~~sp~~~~l~~~-------~~d~~i~v~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~-~d~~~~ 271 (379)
+...+..++|+| +..+++. ..+..|++||..+++ ++..+. .+...+.+++++|+|.++++. .++.|.
T Consensus 239 ~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 239 FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVW 316 (329)
T ss_dssp TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEE
T ss_pred cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEE
Confidence 455688999999 4333333 345589999988876 445542 445668899999999776644 566888
Q ss_pred EEEecC
Q 016982 272 VFAADE 277 (379)
Q Consensus 272 i~~~~~ 277 (379)
+|+.+.
T Consensus 317 ~~~~~~ 322 (329)
T 3fvz_A 317 KFTLTE 322 (329)
T ss_dssp EEEEEE
T ss_pred EEeCCc
Confidence 877553
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=5.5e-19 Score=153.35 Aligned_cols=238 Identities=14% Similarity=0.096 Sum_probs=156.2
Q ss_pred cCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEE--EcCCCCEEEEEe-------------
Q 016982 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGID--WSVRSNRIVTVS------------- 73 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~------------- 73 (379)
+...+..++|+|||+.|++++.++.|++||+.+++...+ +..+...+.... ++|++++++...
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVV--YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEE--EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceee--eechhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 344555778999999999999999999999998843333 344444444333 489998887432
Q ss_pred ---------CCCeEEEEeccCCceeeeEEeecCCCceeEEEECC-CCCEEEEEeCCC------eEEEEEeecCCceeEEE
Q 016982 74 ---------HDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAK------TVCICYYEQENNWWVSK 137 (379)
Q Consensus 74 ---------~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~------~v~i~~~~~~~~~~~~~ 137 (379)
.+..|.+||+.+++.... ..+...+..+.|+| +|+.|+....++ .|.++|..... .+
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l---~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----~~ 229 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTVI---LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN----MR 229 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEEE---EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC----CE
T ss_pred hhhhhhccCCcceEEEEECCCCceEEe---ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc----eE
Confidence 346799999998874333 34566789999999 999998877532 56666655544 23
Q ss_pred EEeecCC--cCEEEEEEcCCCcEEEEeeC-CC----eEEEEeccccccccccccCCCccCCcccc--eEEEeecCCcc--
Q 016982 138 LIRKRHD--SSVTSVAWHPNNVFLATTST-DG----KCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQLDLSFSW-- 206 (379)
Q Consensus 138 ~~~~~~~--~~v~~~~~~p~~~~l~~~~~-d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-- 206 (379)
.+ ..+. ..+..++|+|||+.|+..+. ++ .|.+||+ .+++ .+..+..+...
T Consensus 230 ~l-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~------------------~~g~~~~l~~~~~~~~~~~ 290 (388)
T 3pe7_A 230 KV-KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP------------------ETLENRQLTSMPACSHLMS 290 (388)
T ss_dssp ES-CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT------------------TTCCEEEEEEECCEEEEEE
T ss_pred Ee-eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec------------------CCCceEEEEcCCCceeeee
Confidence 33 2333 35778999999987765443 22 3999987 3333 22222221000
Q ss_pred -eEEEEECCCCCEEEEE---------cCCCeEEEEECCCCCceeeeeeeecC-----------CeeeEEEecCCcEEEEE
Q 016982 207 -AFGVKWSPSGNTLAYV---------GHNSMIYFVDDVGPSPLAQNVAFRDL-----------PLRDVLFVSEKMVIGVG 265 (379)
Q Consensus 207 -v~~~~~sp~~~~l~~~---------~~d~~i~v~d~~~~~~~~~~~~~~~~-----------~i~~~~~s~~~~~l~~~ 265 (379)
...+.|+|||+.|+.. ..+..|++||+.+++ . ..+..+.. .+.+++|+|||+.|+..
T Consensus 291 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~ 368 (388)
T 3pe7_A 291 NYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT-Q-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFT 368 (388)
T ss_dssp CTTSSEEEEEECCC------------CCCCEEEEEETTTTE-E-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred cCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc-e-EEeccccCcccccccccccCCCCccCCCCCCEEEEE
Confidence 1123799999988754 456689999988764 2 44554544 57889999999988733
Q ss_pred --eCCCeEEEEec
Q 016982 266 --FDCNPMVFAAD 276 (379)
Q Consensus 266 --~d~~~~i~~~~ 276 (379)
.++...+|..+
T Consensus 369 s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 369 SDVHGKPALYLAT 381 (388)
T ss_dssp ECTTSSCEEEEEE
T ss_pred ecCCCceeEEEEE
Confidence 35566666543
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.83 E-value=2.3e-17 Score=137.60 Aligned_cols=240 Identities=10% Similarity=0.045 Sum_probs=166.0
Q ss_pred eeccCcceeEEEeCCCCc-EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 6 VHQFAQCITCHAWSPDHA-MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
+..+.....+++|+|+|+ +++++..++.|..|+..++ ...+..+...+.+++++|+|+++++...++.|.+||..
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 334556778999999998 7788888999999999875 34445566788999999999988777677899999998
Q ss_pred CCceeeeEEeec--CCCceeEEEECCCCCEEEE----EeC-----------CCeEEEEEeecCCceeEEEEEeecCCcCE
Q 016982 85 GSEWVPTLVILR--LNRAALCVQWSPKENKFAV----GSG-----------AKTVCICYYEQENNWWVSKLIRKRHDSSV 147 (379)
Q Consensus 85 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~----~~~-----------d~~v~i~~~~~~~~~~~~~~~~~~~~~~v 147 (379)
+++......... ....+..++++|+|+++++ ++. .+.-.||.++.... ...+ ..+....
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~---~~~~-~~~~~~~ 174 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT---LSAP-IRDRVKP 174 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC---EEEE-ECCCSSE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC---EEEe-ecCCCCC
Confidence 876443321111 1234678999999998887 321 01124455544321 2333 4556677
Q ss_pred EEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccce---EEEeecCCcceEEEEECCCCCEEEEEcC
Q 016982 148 TSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ---ILQLDLSFSWAFGVKWSPSGNTLAYVGH 224 (379)
Q Consensus 148 ~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 224 (379)
..++|+|+++.+++.+.++.|.+|++. ..+.. ...+..+...+..++++++|+++++.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~-----------------~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-- 235 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLN-----------------ARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-- 235 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEEC-----------------SSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEEC-----------------CCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--
Confidence 899999999988777778999999972 12222 12222344556789999999977665
Q ss_pred CCeEEEEECCCCCceeeeeeeecCCeeeEEE-ecCCcEEEEEeCCCeEEEEe
Q 016982 225 NSMIYFVDDVGPSPLAQNVAFRDLPLRDVLF-VSEKMVIGVGFDCNPMVFAA 275 (379)
Q Consensus 225 d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~d~~~~i~~~ 275 (379)
++.|.+||.. ++ .+..+..+.. +.+++| +|+++.|..+..+.+.-+..
T Consensus 236 ~~~v~~~~~~-g~-~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 236 GDGVHVLTPD-GD-ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET 284 (296)
T ss_dssp TTEEEEECTT-SC-EEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred CCeEEEECCC-CC-EEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence 7899999976 33 4456665555 899999 58888777666655444443
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=1.7e-17 Score=142.00 Aligned_cols=276 Identities=11% Similarity=0.050 Sum_probs=181.0
Q ss_pred CCCcEEEEEe------cCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEec
Q 016982 20 PDHAMVAFCP------NNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS----------HDRNSYVWNQ 83 (379)
Q Consensus 20 ~~~~~l~~~~------~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vw~~ 83 (379)
++++++++.. .|+.|++||..++ +.+..+..+..+ .++|+|++++++++. .++.|.+||.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~--~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNG--KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTC--CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCC--eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 3666666543 3679999998887 456667766555 899999999998876 2567999999
Q ss_pred cCCceeeeEEeec----CCCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEE-EeecCCcCEEEEEEcCCC
Q 016982 84 EGSEWVPTLVILR----LNRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKL-IRKRHDSSVTSVAWHPNN 156 (379)
Q Consensus 84 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~ 156 (379)
.+.+....+.... +......++++|+|++|+++.. ++.|.+||+.+.+ .... + .. .....+.+.|++
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~---~~~~~i--~~-~~~~~v~~~p~~ 162 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD---YVEDVT--AA-AGCWSVIPQPNR 162 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE---EEEEEG--GG-TTEEEEEECTTS
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc---EEEEEe--cC-CCcceeEEcCCC
Confidence 9888766664321 2245678999999999998874 5789999998875 3444 3 12 222335677766
Q ss_pred -cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEE------EeecCCcceEEEEECCCCCEEEEEcCCCeEE
Q 016982 157 -VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL------QLDLSFSWAFGVKWSPSGNTLAYVGHNSMIY 229 (379)
Q Consensus 157 -~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 229 (379)
..+++.+.||.+.+|+.. ..++... .+.....+ ..+.++|++..++..+.++.+.
T Consensus 163 ~~~~~~~~~dg~~~~v~~~-----------------~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~ 224 (361)
T 2oiz_A 163 PRSFMTICGDGGLLTINLG-----------------EDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVY 224 (361)
T ss_dssp SSEEEEEETTSSEEEEEEC-----------------TTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEE
T ss_pred CeeEEEECCCCcEEEEEEC-----------------CCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEE
Confidence 677888899999999862 1122221 11121222 1334467777777778899999
Q ss_pred EEECCCCCcee-eeeee----------ecCCeeeEEEecCCcEEEE-Ee-----------CCCeEEEEecCCCcEEEEEE
Q 016982 230 FVDDVGPSPLA-QNVAF----------RDLPLRDVLFVSEKMVIGV-GF-----------DCNPMVFAADETGIWTFIKF 286 (379)
Q Consensus 230 v~d~~~~~~~~-~~~~~----------~~~~i~~~~~s~~~~~l~~-~~-----------d~~~~i~~~~~~~~~~~~~~ 286 (379)
++|+....... ..+.. .......++|+|+++.+.. .. ...+.+|+.... +....
T Consensus 225 v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---~~v~~ 301 (361)
T 2oiz_A 225 SADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---QRVAR 301 (361)
T ss_dssp EEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---EEEEE
T ss_pred EEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---cEEEE
Confidence 99987554221 11110 0111234789999776653 32 225666665443 22221
Q ss_pred ecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEE
Q 016982 287 LDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTW 366 (379)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW 366 (379)
+ ..|. +.+++ +++++ ++|++++. +.|.+|
T Consensus 302 i-------------------------------------------~~~~--p~~ia-~spdg----~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 302 I-------------------------------------------PGRD--ALSMT-IDQQR----NLMLTLDG-GNVNVY 330 (361)
T ss_dssp E-------------------------------------------ECTT--CCEEE-EETTT----TEEEEECS-SCEEEE
T ss_pred E-------------------------------------------ecCC--eeEEE-ECCCC----CEEEEeCC-CeEEEE
Confidence 1 2343 78888 77776 78888876 999999
Q ss_pred eCCCc--cccccC
Q 016982 367 DLESQ--EDLLNY 377 (379)
Q Consensus 367 ~~~~~--~~~~~~ 377 (379)
|..++ +.++.+
T Consensus 331 D~~t~~l~~~~~i 343 (361)
T 2oiz_A 331 DISQPEPKLLRTI 343 (361)
T ss_dssp ECSSSSCEEEEEE
T ss_pred ECCCCcceeeEEe
Confidence 99998 877653
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=3.8e-17 Score=138.68 Aligned_cols=237 Identities=12% Similarity=0.090 Sum_probs=164.0
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..|.+++|++++..++..+.++.++.|. + +....+..+...+.+++|+|++++++++..++.|.+||..+++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---A--EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C--EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEeecccCcccc---c--ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 4578899999988887777788899992 2 4556666677778999999999977788888999999998887544
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC----CeEEEEEeecCCceeEEEEEe-ecCCcCEEEEEEcCCCcEEEEeeC-
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGA----KTVCICYYEQENNWWVSKLIR-KRHDSSVTSVAWHPNNVFLATTST- 164 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~~~- 164 (379)
.. ..+...+.+++++|+|+++++...+ +.|.+||.+.... ...+. ......+.+++++|+++++++...
T Consensus 81 ~~--~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 81 PF--VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL---QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp EE--ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC---EEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred Ee--eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE---EEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 32 2456789999999999987777666 6899988776652 22221 123457899999999988776653
Q ss_pred -----CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEE-EEcCCCeEEEEECCCCCc
Q 016982 165 -----DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLA-YVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 165 -----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~i~v~d~~~~~~ 238 (379)
.+.|..+|. ..++ +..+......+..++|+|+|+.|+ +.+.++.|.+||+.....
T Consensus 156 ~~~~~~~~l~~~~~------------------~~~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~ 216 (333)
T 2dg1_A 156 YSTNPLGGVYYVSP------------------DFRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGV 216 (333)
T ss_dssp BTTBCCEEEEEECT------------------TSCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSS
T ss_pred cccCCCceEEEEeC------------------CCCE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCc
Confidence 244555543 1122 222222233478899999998665 445678999999864322
Q ss_pred eeeee------eee-cCCeeeEEEecCCcEEEEEe-CCCeEEEEec
Q 016982 239 LAQNV------AFR-DLPLRDVLFVSEKMVIGVGF-DCNPMVFAAD 276 (379)
Q Consensus 239 ~~~~~------~~~-~~~i~~~~~s~~~~~l~~~~-d~~~~i~~~~ 276 (379)
....+ ... ...+..++++++|+++++.. ++.+.+|+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 217 TIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 11111 001 13567899999999887654 5678888653
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=1.6e-16 Score=134.83 Aligned_cols=238 Identities=8% Similarity=-0.008 Sum_probs=158.6
Q ss_pred eeccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC----CeEEEE
Q 016982 6 VHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD----RNSYVW 81 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vw 81 (379)
+..+...+.+++|+|+|++++++..++.|.+||..+++... ....+...+.+++++|+|+++++...+ +.|.+|
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR--PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE--EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 34455677899999999988888888999999998774332 233456789999999999888777666 689999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCC----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
|..++.....+........+.+++++|+|+++++...+ +...||.++..... . ..+ ......+..++|+|+++
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~-~~~-~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-V-TPI-IQNISVANGIALSTDEK 194 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-E-EEE-EEEESSEEEEEECTTSS
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-E-EEe-ecCCCcccceEECCCCC
Confidence 99887643222111234578999999999877766531 23344544432210 1 222 22334578999999998
Q ss_pred EEE-EeeCCCeEEEEeccccccccccccCCCccCCcccceE--------EEeecCCcceEEEEECCCCCEEEEEcCCCeE
Q 016982 158 FLA-TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI--------LQLDLSFSWAFGVKWSPSGNTLAYVGHNSMI 228 (379)
Q Consensus 158 ~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i 228 (379)
.|+ +.+.++.|.+||+.. .+..+ ..+..+ ..+..++++++|+++++...++.|
T Consensus 195 ~l~v~~~~~~~i~~~d~~~-----------------~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALED-----------------DGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp EEEEEEGGGTEEEEEEECT-----------------TSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEE
T ss_pred EEEEEeCCCCeEEEEEecC-----------------CCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEE
Confidence 554 445678999998621 11111 112222 357889999999988877778999
Q ss_pred EEEECCCCCceeeeeeeecC------CeeeEEEecCCcEEE-EEeCC
Q 016982 229 YFVDDVGPSPLAQNVAFRDL------PLRDVLFVSEKMVIG-VGFDC 268 (379)
Q Consensus 229 ~v~d~~~~~~~~~~~~~~~~------~i~~~~~s~~~~~l~-~~~d~ 268 (379)
.+||.. ++ .+..+..+.. .+.+++|+||++.|. ++.++
T Consensus 257 ~~~d~~-g~-~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 257 LVFNKR-GY-PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEECTT-SC-EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEECCC-CC-EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 999974 33 3344443322 578999999976554 54443
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=2.2e-15 Score=125.57 Aligned_cols=240 Identities=8% Similarity=-0.076 Sum_probs=168.5
Q ss_pred ccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCc
Q 016982 8 QFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSE 87 (379)
Q Consensus 8 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~ 87 (379)
.+...+.+++++++|+++++...++.|.+||.. +.... ..+..+...+.+++++++|+.+++...++.|..|+.. ++
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 345689999999999988776667899999988 53322 2233345678999999999888877768889999986 33
Q ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCe
Q 016982 88 WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGK 167 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~ 167 (379)
. ..+........+..+++.++++++++...++.|..||. .+. ............+..+++.++++++++...++.
T Consensus 89 ~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 89 I-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK---IREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp E-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred E-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC---EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 2 22322224457899999999988877777888998887 433 222221234567899999999988887777788
Q ss_pred EEEEeccccccccccccCCCccCCcccceEE-EeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeee
Q 016982 168 CRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL-QLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR 246 (379)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 246 (379)
|..||. .++... ........+..++++++|+++++...++.|.+||. ++.........+
T Consensus 164 i~~~~~-------------------~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~ 223 (299)
T 2z2n_A 164 IGRITE-------------------SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTP 223 (299)
T ss_dssp EEEECT-------------------TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred EEEEcC-------------------CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCC
Confidence 999974 222221 12223445789999999998777777889999998 544221112223
Q ss_pred cCCeeeEEEecCCcEEEEE-eCCCeEEEEe
Q 016982 247 DLPLRDVLFVSEKMVIGVG-FDCNPMVFAA 275 (379)
Q Consensus 247 ~~~i~~~~~s~~~~~l~~~-~d~~~~i~~~ 275 (379)
...+.+++++++|+++++. .++.+..|+.
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 4568899999999977765 4567777765
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=1.4e-16 Score=148.99 Aligned_cols=240 Identities=8% Similarity=0.033 Sum_probs=151.6
Q ss_pred CCCcEEEEEecCC-----eEEEEEecCCceEEEEEe----ccCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeccC
Q 016982 20 PDHAMVAFCPNNN-----EVHIYKLIQEKWEKLHVL----QKHDQIVSGIDWSVRSNRIVTVSHDR-----NSYVWNQEG 85 (379)
Q Consensus 20 ~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~~~ 85 (379)
|+|++++....++ .+.+.+..+++.+.+... .+|...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8999887765432 334444334432322111 12444688999999999998776543 899999999
Q ss_pred CceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCe----------------EEEEEeecCCceeEEEEEe-ecCCcCEE
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT----------------VCICYYEQENNWWVSKLIR-KRHDSSVT 148 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------v~i~~~~~~~~~~~~~~~~-~~~~~~v~ 148 (379)
++...... . ...+..++|+|||+.|+.++.++. |++|++.++..... .... ..+...+.
T Consensus 161 g~~~~~~~-~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~-~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 161 AKELPDVL-E--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI-LCAEFPDEPKWMG 236 (710)
T ss_dssp TEEEEEEE-E--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE-EEECCTTCTTCEE
T ss_pred CCCCcccc-c--CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce-EEeccCCCCeEEE
Confidence 98654321 1 223678999999999999988765 89999877652111 1110 22455678
Q ss_pred EEEEcCCCcEEEEeeC-----CCeEEEEeccccccccccccCCCccCCcccc-eEEEeecCCcceEEEEECCCCCEEEEE
Q 016982 149 SVAWHPNNVFLATTST-----DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE-QILQLDLSFSWAFGVKWSPSGNTLAYV 222 (379)
Q Consensus 149 ~~~~~p~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~ 222 (379)
.+.|+|||++|+..+. +..|.+||+..... + ..+. ....+..+...+.. .|+|+|+.|+..
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~--~----------~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~ 303 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN--G----------ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFK 303 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS--S----------SCSSCCCEEEECSSSSCEE-EEEEETTEEEEE
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECccccc--c----------cCCccceEEeeCCCCcEEE-EEeccCCEEEEE
Confidence 9999999999887764 56899998721000 0 0011 34445555554544 588999887766
Q ss_pred cCC----CeEEEEECCCCCc-eeeeeeeecC--CeeeEEEecCCcEEEE-EeCCCeEEEEec
Q 016982 223 GHN----SMIYFVDDVGPSP-LAQNVAFRDL--PLRDVLFVSEKMVIGV-GFDCNPMVFAAD 276 (379)
Q Consensus 223 ~~d----~~i~v~d~~~~~~-~~~~~~~~~~--~i~~~~~s~~~~~l~~-~~d~~~~i~~~~ 276 (379)
+.. +.|.+||+.++.. ..+.+..+.. .+..++|++++.++++ ..++...+|..+
T Consensus 304 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 304 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEE
T ss_pred ECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEE
Confidence 543 4699999887642 1234444433 5788999977777764 456655555443
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=9.7e-17 Score=135.76 Aligned_cols=245 Identities=14% Similarity=0.139 Sum_probs=169.6
Q ss_pred CCceEEEEEcCCCCEEEEEeCC------------------------CeEEEEeccCCceeeeEEeecCCCceeEEEECCC
Q 016982 54 DQIVSGIDWSVRSNRIVTVSHD------------------------RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK 109 (379)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 109 (379)
-+.+.+++++|+|+++++...+ +.|.+||..+++...... ..+-..+..++++|+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG-KNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC-TTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC-CCccCCceEEEECCC
Confidence 3578999999999988887776 479999998887544331 123357889999999
Q ss_pred CCEEEEEeCCCeEEEEEeecCCceeEEEEEe--------ecCCcCEEEEEEcC-CCcEEEEee-CCCeEEEEeccccccc
Q 016982 110 ENKFAVGSGAKTVCICYYEQENNWWVSKLIR--------KRHDSSVTSVAWHP-NNVFLATTS-TDGKCRVFSTFIKGVD 179 (379)
Q Consensus 110 ~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~p-~~~~l~~~~-~d~~i~v~d~~~~~~~ 179 (379)
|+++++...++.|++|+.+.... ....+. ..+......++++| +++++++.+ .++.|++|+.
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~--~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~------ 173 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEG--PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP------ 173 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSC--CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT------
T ss_pred CCEEEEECCCCEEEEEeCCCCeE--EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC------
Confidence 99888888889999998765421 112221 12334688999999 788888886 6899999984
Q ss_pred cccccCCCccCCcccceEEEeec----------CCcceEEEEECCC-CCEEEEEcCCCeEEEEECCCCCceeeeee--ee
Q 016982 180 IKEKKEGTSSDTKFGEQILQLDL----------SFSWAFGVKWSPS-GNTLAYVGHNSMIYFVDDVGPSPLAQNVA--FR 246 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~sp~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~ 246 (379)
.+..+..+.. +......++++|+ +.++++...++.|++||..+++ .+..+. .+
T Consensus 174 -------------~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~-~~~~~~~~~~ 239 (329)
T 3fvz_A 174 -------------SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE-FVREIKHASF 239 (329)
T ss_dssp -------------TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-EEEEECCTTT
T ss_pred -------------CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc-EEEEEecccc
Confidence 3444444421 1223789999998 7777777788999999988554 345543 34
Q ss_pred cCCeeeEEEecCCcEEEEE--------eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccC
Q 016982 247 DLPLRDVLFVSEKMVIGVG--------FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGV 318 (379)
Q Consensus 247 ~~~i~~~~~s~~~~~l~~~--------~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
...+.+++|+| +.+++.. .+..+.+|+...........
T Consensus 240 ~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~--------------------------------- 285 (329)
T 3fvz_A 240 GRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFK--------------------------------- 285 (329)
T ss_dssp TTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEEC---------------------------------
T ss_pred CCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEc---------------------------------
Confidence 56688999999 4443322 22356666655433221110
Q ss_pred cccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCC
Q 016982 319 GNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 319 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~ 370 (379)
...+|...+.+|+ +++++ .++++...+++|++|++..
T Consensus 286 ----------~~~~~~~~p~~ia-~~~dG----~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 286 ----------PVRKHFDMPHDIV-ASEDG----TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ----------CSSSCCSSEEEEE-ECTTS----EEEEEESSSCCEEEEEEEE
T ss_pred ----------CCCCccCCeeEEE-ECCCC----CEEEEECCCCEEEEEeCCc
Confidence 0024566788899 76665 8999999999999999865
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=8.5e-17 Score=150.41 Aligned_cols=243 Identities=9% Similarity=-0.076 Sum_probs=164.0
Q ss_pred CcceeEEEeCCCCcEEEEEecCC-----eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCe-------
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNN-----EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN------- 77 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~------- 77 (379)
...+..++|||||++||.+..++ .|++||+.+++.... .+.. ..+..++|+|||+.|+.++.++.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-cccC--cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 34688999999999999876543 899999998843221 2222 23678999999999999887765
Q ss_pred ---------EEEEeccCCceeeeEEee--cCCCceeEEEECCCCCEEEEEeC-----CCeEEEEEeec------CCceeE
Q 016982 78 ---------SYVWNQEGSEWVPTLVIL--RLNRAALCVQWSPKENKFAVGSG-----AKTVCICYYEQ------ENNWWV 135 (379)
Q Consensus 78 ---------i~vw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~i~~~~~------~~~~~~ 135 (379)
|++|++.+++....+... .+...+..+.|+|||++|+..+. +..|++||+.. +.. .
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~ 278 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL--K 278 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--C
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--c
Confidence 999999887632222212 23455789999999999988765 56899999876 421 1
Q ss_pred EEEEeecCCcCEEEEEEcCCCcEEEEeeCC----CeEEEEeccccccccccccCCCccCCcccc--eEEEeecCCc--ce
Q 016982 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTD----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQLDLSFS--WA 207 (379)
Q Consensus 136 ~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~v 207 (379)
...+ ..+...+.. .|+|+|+.|+..+.. +.|.+||+. .+. ....+..+.. .+
T Consensus 279 ~~~l-~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~------------------~~~~~~~~~l~~~~~~~~~ 338 (710)
T 2xdw_A 279 WVKL-IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT------------------DPEESKWKVLVPEHEKDVL 338 (710)
T ss_dssp CEEE-ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT------------------SCCGGGCEEEECCCSSCEE
T ss_pred eEEe-eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC------------------CCCcccceeccCCCCCCeE
Confidence 2333 445555544 488898877766543 368888862 221 1233333333 67
Q ss_pred EEEEECCCCCEEEEEcCCCe--EEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEE-E-Ee---CCCeEEEEecCC
Q 016982 208 FGVKWSPSGNTLAYVGHNSM--IYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG-V-GF---DCNPMVFAADET 278 (379)
Q Consensus 208 ~~~~~sp~~~~l~~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~-~~---d~~~~i~~~~~~ 278 (379)
..++|++++.++++...++. |.+||+.+++ ....+..+...+..++++|++..++ + ++ ...++.|+....
T Consensus 339 ~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 339 EWVACVRSNFLVLCYLHDVKNTLQLHDLATGA-LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEETTTCC-EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EEEEEEcCCEEEEEEEECCEEEEEEEECCCCC-EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 88999988888888888874 6667875554 3355666667788899999987555 2 22 245667766543
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=1.7e-16 Score=135.42 Aligned_cols=223 Identities=13% Similarity=0.074 Sum_probs=150.4
Q ss_pred cceeEEEeCCCCcEEEEEecC---C--eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC----------
Q 016982 11 QCITCHAWSPDHAMVAFCPNN---N--EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD---------- 75 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~d---g--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 75 (379)
..+..++|||||++||+.+.+ + .|++|++.+++ ...... +.. +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--SKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--EEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--eEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 457789999999999987653 3 47777887763 333332 233 8999999999998887632
Q ss_pred -----------------CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-------eEEEEEeecCC
Q 016982 76 -----------------RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK-------TVCICYYEQEN 131 (379)
Q Consensus 76 -----------------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~v~i~~~~~~~ 131 (379)
..|.+||+.+++....+.. . .+..+.|+|+| +++++..++ ...+|.++.+.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc
Confidence 5699999998875333432 3 78899999999 777776542 45666666332
Q ss_pred ceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCC--------eEEEEeccccccccccccCCCccCCcccceEEEeecC
Q 016982 132 NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG--------KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS 203 (379)
Q Consensus 132 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~--------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (379)
.+.+ ..+ ..+..+ +|+|++|+.++.++ .|.+|| .++.......+
T Consensus 210 ----~~~l-~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--------------------~~~~~~l~~~~ 261 (347)
T 2gop_A 210 ----EEKM-FEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--------------------GKEVMGILDEV 261 (347)
T ss_dssp ----EEEE-EEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--------------------SSCEEESSTTC
T ss_pred ----eEEe-ccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--------------------CCceEeccccC
Confidence 2333 233 555554 99999888776543 566664 12222223344
Q ss_pred CcceEE-EEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCe-EEEEec
Q 016982 204 FSWAFG-VKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNP-MVFAAD 276 (379)
Q Consensus 204 ~~~v~~-~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~-~i~~~~ 276 (379)
...+.. +.|+ ++ ++++++.++.+++| +.++ .. ..+..+...+.+++|+| .-+++.+.++.. .+|..+
T Consensus 262 ~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~~-~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 262 DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-EI-KPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-SE-EEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-ce-EEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 566776 9999 88 88888899999999 8743 33 33334467789999999 433345566655 788766
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=6.7e-17 Score=150.67 Aligned_cols=233 Identities=12% Similarity=0.036 Sum_probs=148.2
Q ss_pred CCCCcEEEEEecCC---eEEEEE--ecCCceEEEEEe----ccCCCceEEEEEcCCCCEEEEE-----eCCCeEEEEecc
Q 016982 19 SPDHAMVAFCPNNN---EVHIYK--LIQEKWEKLHVL----QKHDQIVSGIDWSVRSNRIVTV-----SHDRNSYVWNQE 84 (379)
Q Consensus 19 s~~~~~l~~~~~dg---~i~i~~--~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~-----~~d~~i~vw~~~ 84 (379)
+|+|++++....++ .-.||. ..+++.+.+... .+|...+..++|||||++|+.+ +.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47899888776643 344444 444433333221 2355578999999999998843 334689999999
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCe-------------EEEEEeecCCceeEEEEEe--ecCCcCEEE
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT-------------VCICYYEQENNWWVSKLIR--KRHDSSVTS 149 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------v~i~~~~~~~~~~~~~~~~--~~~~~~v~~ 149 (379)
+++....... .......++|+|||+.|+.++.|.. |++|++.++.... ..+. ..+...+..
T Consensus 156 tg~~~~~~~~--~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~--~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 156 SGEWSKVDVI--EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD--TVVHERTGDPTTFLQ 231 (695)
T ss_dssp TCCBCSSCCB--SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC--EEEECCCCCTTCEEE
T ss_pred CCCCcCCccc--CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc--eEEEecCCCCEEEEE
Confidence 9875311111 1111268999999999999988776 9999988765211 1221 234567889
Q ss_pred EEEcCCCcEEEEeeCCC----eEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc--
Q 016982 150 VAWHPNNVFLATTSTDG----KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG-- 223 (379)
Q Consensus 150 ~~~~p~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-- 223 (379)
+.|+|||++|+..+.++ .|.+++. ..+ ....+..+...+....+ ++|.+++.+.
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~------------------~~~-~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~ 291 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRP------------------GEK-DFRLLVKGVGAKYEVHA-WKDRFYVLTDEG 291 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECT------------------TCS-SCEEEEECSSCCEEEEE-ETTEEEEEECTT
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcC------------------CCC-ceEEeecCCCceEEEEe-cCCcEEEEECCC
Confidence 99999999888877655 5556543 222 23344444555566666 5666444444
Q ss_pred -CCCeEEEEECCCCCc--eeeeeeee-cCCeeeEEEecCCcEEE-EEeCCCeEEEEec
Q 016982 224 -HNSMIYFVDDVGPSP--LAQNVAFR-DLPLRDVLFVSEKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 224 -~d~~i~v~d~~~~~~--~~~~~~~~-~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~ 276 (379)
.++.|.+||+.++.. ....+..+ ...+..++|+ ++.+++ ...++..++|..+
T Consensus 292 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 292 APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 257899999877642 12223222 4457888888 566666 5567777887765
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.78 E-value=1.2e-14 Score=130.61 Aligned_cols=302 Identities=9% Similarity=-0.013 Sum_probs=197.7
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEec--CCceEEEEEeccCCCceEEEEEc----CCCCEEEEEe-CCCeEEEEe
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLI--QEKWEKLHVLQKHDQIVSGIDWS----VRSNRIVTVS-HDRNSYVWN 82 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~-~d~~i~vw~ 82 (379)
...+..+.|+|||+++++++.++.|.+||+. +. +.+..+.... ....++|+ |+|++++++. .++++.++|
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--TTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--CEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--cEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 4467799999999999999999999999996 44 5666666533 45789999 6999887766 458999999
Q ss_pred ccCCceeeeEEeec--------C-CCceeEEEECCCCCEEE-EEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEE
Q 016982 83 QEGSEWVPTLVILR--------L-NRAALCVQWSPKENKFA-VGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAW 152 (379)
Q Consensus 83 ~~~~~~~~~~~~~~--------~-~~~v~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 152 (379)
..+.+.+..+...+ | ...+..+..++++..++ ....+|.|.++|+........ .. ........++.|
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v-~~--i~~~~~~~d~~~ 349 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT-TE--ISAERFLHDGGL 349 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE-EE--EECCSSEEEEEE
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee-ee--eeccccccCceE
Confidence 99988776664322 1 12577888888766544 445579999988876543211 22 234456778999
Q ss_pred cCCCcEEEEee-CCCeEEEEeccccccccccccCCCccCCcccceEEEeec-----CCcceEEEEECCCCCEE-EEEc-C
Q 016982 153 HPNNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-----SFSWAFGVKWSPSGNTL-AYVG-H 224 (379)
Q Consensus 153 ~p~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~sp~~~~l-~~~~-~ 224 (379)
+|++++++++. .++.|.++|+ .+++.+..+.. |.+.-..+ ++|++..+ +++. .
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~------------------~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDT------------------KEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMG 410 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEET------------------TTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSS
T ss_pred CCCCCEEEEEeCCCCeEEEEEC------------------CCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCC
Confidence 99999887665 5789999997 55555555543 22212122 58875544 4443 4
Q ss_pred CCeEEEEECCCC------CceeeeeeeecCCeeeEEEecCCcEEEEEe--------CCCeEEEEecCC-----C-cEEEE
Q 016982 225 NSMIYFVDDVGP------SPLAQNVAFRDLPLRDVLFVSEKMVIGVGF--------DCNPMVFAADET-----G-IWTFI 284 (379)
Q Consensus 225 d~~i~v~d~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------d~~~~i~~~~~~-----~-~~~~~ 284 (379)
++.|.++|.... .+.++.+......-..+..+|+++++.+.. .+.|.+|+.... . .++++
T Consensus 411 ~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~ 490 (567)
T 1qks_A 411 DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTL 490 (567)
T ss_dssp SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEE
T ss_pred CCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEe
Confidence 689999998762 224566654444435578899999887654 347888887643 1 11111
Q ss_pred EEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEee----cC
Q 016982 285 KFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG----LD 360 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~----~D 360 (379)
..-+.. .+..-...+..++ |+++|+ ..++|.. .+
T Consensus 491 ~~~~~~--------------------------------------~~~~~~~~~~~~~-~~~~G~---~~~~s~~~~~~~~ 528 (567)
T 1qks_A 491 PIAEWA--------------------------------------GITEGQPRVVQGE-FNKDGT---EVWFSVWNGKDQE 528 (567)
T ss_dssp CHHHHH--------------------------------------TCCSSCCEEEEEE-ECTTSS---EEEEEEECCTTSC
T ss_pred cccccc--------------------------------------ccCCCCcceEeee-ECCCCC---EEEEEeecCCCCC
Confidence 000000 0001124677888 877761 3444432 37
Q ss_pred ceEEEEeCCCccccccCC
Q 016982 361 GKIVTWDLESQEDLLNYH 378 (379)
Q Consensus 361 g~v~iW~~~~~~~~~~~~ 378 (379)
+.|.++|.++++.++.+.
T Consensus 529 ~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 529 SALVVVDDKTLELKHVIK 546 (567)
T ss_dssp CEEEEEETTTTEEEEEEC
T ss_pred CcEEEEECCCceEEEEeC
Confidence 999999999988776543
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=8e-16 Score=126.19 Aligned_cols=228 Identities=11% Similarity=0.111 Sum_probs=168.2
Q ss_pred CCcEEEEEecCCeEEEEEecCCceEEEEEeccCC-CceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCC
Q 016982 21 DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHD-QIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNR 99 (379)
Q Consensus 21 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~ 99 (379)
.+++|++++.++.|++||.+++ +.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+.. ....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG--~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~-~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK--EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA-PAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT--EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC-CTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCC--eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC-CCCc
Confidence 4688999999999999999887 6777777665 4688999999999888 34678999999 7776665542 2235
Q ss_pred ceeEEEECCCCCEEEEEeC-CCeEEEEEeecCCceeEEEEEee-----cCCcCEEEEEEcCCCcEEEEeeCCCeEEEEec
Q 016982 100 AALCVQWSPKENKFAVGSG-AKTVCICYYEQENNWWVSKLIRK-----RHDSSVTSVAWHPNNVFLATTSTDGKCRVFST 173 (379)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~ 173 (379)
.+.++.+.++|+.+++.+. ++.+..++. .++ ....+.. .+......+++.++|+++++...++.|..||.
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk---~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGE---VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSC---EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCC---EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 7888999999999999887 666666554 333 1222211 12224456678899999999999999999995
Q ss_pred cccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeec------
Q 016982 174 FIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD------ 247 (379)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~------ 247 (379)
. ++.+.++... ..+.++...++|+.++++..++.|..+|..+++.+ ..+....
T Consensus 154 ------------------~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~-w~~~~~~~~~~~l 212 (276)
T 3no2_A 154 ------------------N-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV-RRVNANDIEGVQL 212 (276)
T ss_dssp ------------------T-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE-EEEEGGGSBSCCC
T ss_pred ------------------C-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE-EEecCCCCCCccc
Confidence 4 7777777654 34567788999999998888889999998877643 4444222
Q ss_pred CCeeeEEEecCCcEEEEEeCC---------CeEEEEecCCC
Q 016982 248 LPLRDVLFVSEKMVIGVGFDC---------NPMVFAADETG 279 (379)
Q Consensus 248 ~~i~~~~~s~~~~~l~~~~d~---------~~~i~~~~~~~ 279 (379)
..+..+...++|.++++++++ ..+++..+..+
T Consensus 213 ~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 213 FFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp SEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred cccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 226788888999999987644 34577776655
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=4.8e-16 Score=129.58 Aligned_cols=200 Identities=10% Similarity=0.031 Sum_probs=140.0
Q ss_pred EeccCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEe
Q 016982 49 VLQKHDQIVSGIDWSVRSN-RIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127 (379)
Q Consensus 49 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~ 127 (379)
.+..+.....+++|+|+++ +++++..++.|..|+..++ ...+ ..+...+.+++++|+|+++++...++.|.+||.
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~--~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE--MHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE--ESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE--ECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 3444555678999999998 6777788899999999877 3333 345677899999999998877777789999998
Q ss_pred ecCCceeEEEEEee---cCCcCEEEEEEcCCCcEEEE----eeC-------------CCeEEEEeccccccccccccCCC
Q 016982 128 EQENNWWVSKLIRK---RHDSSVTSVAWHPNNVFLAT----TST-------------DGKCRVFSTFIKGVDIKEKKEGT 187 (379)
Q Consensus 128 ~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~ 187 (379)
.++.. ...... .....+..++++|+|+++++ ++. .+.|..++.
T Consensus 98 ~~g~~---~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~-------------- 160 (296)
T 3e5z_A 98 PGGEW---ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP-------------- 160 (296)
T ss_dssp TTCCE---EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT--------------
T ss_pred CCCcE---EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECC--------------
Confidence 66652 222201 11234568999999998887 331 234555542
Q ss_pred ccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCce---eeeeeeecCCeeeEEEecCCcEEEE
Q 016982 188 SSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL---AQNVAFRDLPLRDVLFVSEKMVIGV 264 (379)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~ 264 (379)
.++ +..+..+......++|+|+|+.|++.+.++.|.+||+.....+ ...+..+...+..++++++|+++++
T Consensus 161 -----~g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 161 -----DGT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWAS 234 (296)
T ss_dssp -----TSC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEE
T ss_pred -----CCC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEE
Confidence 122 3334444556789999999999877778899999998632222 1222233455778999999998887
Q ss_pred EeCCCeEEEEec
Q 016982 265 GFDCNPMVFAAD 276 (379)
Q Consensus 265 ~~d~~~~i~~~~ 276 (379)
. ++.+.+|+.+
T Consensus 235 ~-~~~v~~~~~~ 245 (296)
T 3e5z_A 235 A-GDGVHVLTPD 245 (296)
T ss_dssp E-TTEEEEECTT
T ss_pred c-CCeEEEECCC
Confidence 7 7888888764
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=1.5e-17 Score=144.60 Aligned_cols=229 Identities=13% Similarity=0.067 Sum_probs=151.7
Q ss_pred EEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEE-------------------EEEcCCCCEEEEE---
Q 016982 15 CHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSG-------------------IDWSVRSNRIVTV--- 72 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~--- 72 (379)
.+.|+|||++|++++.++.|++|++.+++...+. ..+...... +.|+|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIY--TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE--ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 3789999999999999899999999887433333 323332222 3567888776554
Q ss_pred --eCCCeEEEEeccCCceeeeEEeecCCCceeEEEECC-CCCEEEEEeCC------CeEEEEEeecCCceeEEEEEeecC
Q 016982 73 --SHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGA------KTVCICYYEQENNWWVSKLIRKRH 143 (379)
Q Consensus 73 --~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~~~~ 143 (379)
..+..|.+||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+|++.... .+.+ ..+
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l-~~~ 234 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN----VRKI-KEH 234 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC----CEES-SCC
T ss_pred cCCCcceEEEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc----eeEe-ecc
Confidence 35568999999988744333 4567789999999 78877776653 357777765543 2222 222
Q ss_pred --CcCEEEEEEcCCCcEEEEeeCC-----CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECC-C
Q 016982 144 --DSSVTSVAWHPNNVFLATTSTD-----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSP-S 215 (379)
Q Consensus 144 --~~~v~~~~~~p~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~ 215 (379)
...+..++|+|+|++|+..+.+ +.|.+||+ .+++....... .. .. +.|+| +
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~------------------~~g~~~~l~~~-~~-~~-~~~s~~d 293 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP------------------ETLENEEVMVM-PP-CS-HLMSNFD 293 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT------------------TTCCEEEEEEC-CS-EE-EEEECSS
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEEC------------------CCCCeEEeeeC-CC-CC-CCccCCC
Confidence 2357889999999987776543 44999986 33332221111 11 23 89999 9
Q ss_pred CCEEEEEc----------------CCCeEEEEECCCCCceeeeeeeecC-----------CeeeEEEecCCcEEEEEe--
Q 016982 216 GNTLAYVG----------------HNSMIYFVDDVGPSPLAQNVAFRDL-----------PLRDVLFVSEKMVIGVGF-- 266 (379)
Q Consensus 216 ~~~l~~~~----------------~d~~i~v~d~~~~~~~~~~~~~~~~-----------~i~~~~~s~~~~~l~~~~-- 266 (379)
|+++++++ .+..|++||+.++.. ..+..+.. .+..++|+|||+.|+...
T Consensus 294 g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 294 GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA--QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp SSEEEEEECCC----------CCCCCCEEEEEETTTTBC--CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CceEEEecCCcceeeccccccccCCCCcEEEEecccCce--EEccCCCCccccccccccCCCCCceEccCCCeEEEEecC
Confidence 99888754 347899999887653 33444433 256789999999877332
Q ss_pred CCCeEEEEec
Q 016982 267 DCNPMVFAAD 276 (379)
Q Consensus 267 d~~~~i~~~~ 276 (379)
++...+|..+
T Consensus 372 ~~~~~l~~~~ 381 (396)
T 3c5m_A 372 EGVPAIYIAD 381 (396)
T ss_dssp TSSCEEEEEE
T ss_pred CCCceEEEEE
Confidence 4556666654
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=5.3e-16 Score=132.71 Aligned_cols=217 Identities=11% Similarity=0.014 Sum_probs=142.4
Q ss_pred EEEeCCCCcEEEEEe----------cCCeEEEEEecCCceEEEEEeccC------CCceEEEEEcCCCCEEEEEeC--CC
Q 016982 15 CHAWSPDHAMVAFCP----------NNNEVHIYKLIQEKWEKLHVLQKH------DQIVSGIDWSVRSNRIVTVSH--DR 76 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~ 76 (379)
.++|+|||++++++. .++.|.+||..+. +.+..+... ......++++|+|++|+++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 899999999998876 2567999998876 455544422 234568999999999988864 57
Q ss_pred eEEEEeccCCceeee-EEeecCCCceeEEEECCCC-CEEEEEeCCCeEEEEEeec-------------------------
Q 016982 77 NSYVWNQEGSEWVPT-LVILRLNRAALCVQWSPKE-NKFAVGSGAKTVCICYYEQ------------------------- 129 (379)
Q Consensus 77 ~i~vw~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~~~~~------------------------- 129 (379)
.|.+||+.+++.+.. + ... ....+.+.|++ ..+++.+.||.+.++++..
T Consensus 132 ~v~v~d~~~~~~~~~~i---~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVT---AAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAP 207 (361)
T ss_dssp EEEEEETTTTEEEEEEG---GGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCC
T ss_pred eEEEEECCCCcEEEEEe---cCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEe
Confidence 899999999875443 2 111 11112333432 3333444444444444322
Q ss_pred -----------------------CCceeEEEEEe--e---cC----CcCEEEEEEcCCCcEEEEeeC-----------CC
Q 016982 130 -----------------------ENNWWVSKLIR--K---RH----DSSVTSVAWHPNNVFLATTST-----------DG 166 (379)
Q Consensus 130 -----------------------~~~~~~~~~~~--~---~~----~~~v~~~~~~p~~~~l~~~~~-----------d~ 166 (379)
.... ....+. . .+ ......++|+|+++.++++.. .+
T Consensus 208 ~~~g~~~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~ 286 (361)
T 2oiz_A 208 ALDKDKAHFVSYYGNVYSADFSGDEVK-VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAA 286 (361)
T ss_dssp EECSSEEEEEBTTSEEEEEECSSSSCE-EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCS
T ss_pred cccCCEEEEEeCCCeEEEEEecCCCce-ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCc
Confidence 2100 000000 0 00 000112678888776666543 34
Q ss_pred eEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCC--Cceeeeee
Q 016982 167 KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGP--SPLAQNVA 244 (379)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~ 244 (379)
.|.+||+ .+.+.+.++..+. +.+++|+|+|++|++++. +.|.+||..++ + ++..+.
T Consensus 287 ~v~viD~------------------~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~-~~~~i~ 344 (361)
T 2oiz_A 287 EIWVMDT------------------KTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPK-LLRTIE 344 (361)
T ss_dssp EEEEEET------------------TTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCE-EEEEET
T ss_pred eEEEEEC------------------CCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcce-eeEEec
Confidence 7999996 6788888888766 899999999999998887 99999999887 5 446654
Q ss_pred eecCCeeeEEEecCCc
Q 016982 245 FRDLPLRDVLFVSEKM 260 (379)
Q Consensus 245 ~~~~~i~~~~~s~~~~ 260 (379)
..+.....++++|+|+
T Consensus 345 ~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 345 GAAEASLQVQFHPVGG 360 (361)
T ss_dssp TSCSSEEEEEECCCSC
T ss_pred cCCCCcEEEEecCCCC
Confidence 5567778999999985
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=5.5e-16 Score=127.34 Aligned_cols=238 Identities=8% Similarity=-0.082 Sum_probs=159.7
Q ss_pred ceeEEEeCCCCcEEE-EEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 12 CITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
...+++++++|++++ +...++.|.+|+..+.. .......+...+.+++++++++++++.. ++.|.+||..+.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG--TTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc--cceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee
Confidence 778999999999777 54678899999876542 2111122334678999999998666555 8899999987764221
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEE
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRV 170 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v 170 (379)
+. ......+..++++++|+++++...++.|.+|+...... ..........+.+++++|+++++++...++.|.+
T Consensus 102 -~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 102 -LP-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 175 (270)
T ss_dssp -CC-CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE
T ss_pred -ee-cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCCEEEEECCCCEEEE
Confidence 11 12235688999999999777777788898885443321 1111223345788999999997777777889999
Q ss_pred EeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCe
Q 016982 171 FSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPL 250 (379)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i 250 (379)
||.. ..........+...+..++++++|.++++...++.|.+||..+.... .....+...+
T Consensus 176 ~~~~------------------~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~p 236 (270)
T 1rwi_B 176 LEAE------------------SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTP 236 (270)
T ss_dssp ECTT------------------TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-ECCCCSCSCE
T ss_pred EecC------------------CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-eeccCCCCCc
Confidence 9862 22222211222256789999999988877777889999998664422 2221223568
Q ss_pred eeEEEecCCcEEEE-EeCCCeEEEEecC
Q 016982 251 RDVLFVSEKMVIGV-GFDCNPMVFAADE 277 (379)
Q Consensus 251 ~~~~~s~~~~~l~~-~~d~~~~i~~~~~ 277 (379)
.+++++++|+++++ ..++.|.++....
T Consensus 237 ~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred eeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 89999999987765 4567787776553
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=2.8e-16 Score=146.54 Aligned_cols=242 Identities=9% Similarity=-0.087 Sum_probs=155.7
Q ss_pred cCcceeEEEeCCCCcEEEEE-----ecCCeEEEEEecCCceEEEEEeccCCCce--EEEEEcCCCCEEEEEeCCCe----
Q 016982 9 FAQCITCHAWSPDHAMVAFC-----PNNNEVHIYKLIQEKWEKLHVLQKHDQIV--SGIDWSVRSNRIVTVSHDRN---- 77 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~-----~~dg~i~i~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~---- 77 (379)
|...+.+++|||||++||.+ +.+..|++||+.+++. +. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~--~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW--SK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB--CS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC--cC--CcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 44578999999999999954 3346899999998742 10 1122222 68999999999999988765
Q ss_pred ---------EEEEeccCCcee--eeEEeecCCCceeEEEECCCCCEEEEEeCCC----eEEEEEeecCCceeEEEEEeec
Q 016982 78 ---------SYVWNQEGSEWV--PTLVILRLNRAALCVQWSPKENKFAVGSGAK----TVCICYYEQENNWWVSKLIRKR 142 (379)
Q Consensus 78 ---------i~vw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~i~~~~~~~~~~~~~~~~~~ 142 (379)
|++|++.+++.. ..+....+...+..+.|+|||++|++.+.++ .|.+++...+. .+.+ ..
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----~~~l-~~ 269 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----FRLL-VK 269 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----CEEE-EE
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----eEEe-ec
Confidence 999999887632 2222223445788999999999998887665 45555433333 2333 34
Q ss_pred CCcCEEEEEEcCCCcEEEEee---CCCeEEEEeccccccccccccCCCccCCcccce--EEEe-ecC-CcceEEEEECCC
Q 016982 143 HDSSVTSVAWHPNNVFLATTS---TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ--ILQL-DLS-FSWAFGVKWSPS 215 (379)
Q Consensus 143 ~~~~v~~~~~~p~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~-~~~v~~~~~sp~ 215 (379)
+...+....+ +++.+++... .++.|.+||+. .+.. ...+ ..+ ...+..++|+ +
T Consensus 270 ~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~------------------~~~~~~~~~l~~~~~~~~l~~~~~~-~ 329 (695)
T 2bkl_A 270 GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA------------------KPARASWKEIVPEDSSASLLSVSIV-G 329 (695)
T ss_dssp CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT------------------BCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC------------------CCCccCCeEEecCCCCCeEEEEEEE-C
Confidence 4555566666 5666444433 25789999862 2221 1222 222 4457888888 6
Q ss_pred CCEEEEEcCCCeEEEEECCCCCceeeeeeee-cCCeeeEEEecCCcEEE-E-Ee---CCCeEEEEecCCC
Q 016982 216 GNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR-DLPLRDVLFVSEKMVIG-V-GF---DCNPMVFAADETG 279 (379)
Q Consensus 216 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~-~-~~---d~~~~i~~~~~~~ 279 (379)
+.++++...|+..++|.+.........+..+ ...+..++++|++..++ + ++ .+.+++|+.....
T Consensus 330 ~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 330 GHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7778888888887777544212233445444 55678889999987665 2 22 2467777765543
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.75 E-value=6.2e-14 Score=116.82 Aligned_cols=238 Identities=6% Similarity=-0.063 Sum_probs=165.5
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCcee
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWV 89 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 89 (379)
...+.+++++++|++.++...++.|.+|+.. ++... ..+......+.++++.++++..++...++.|..+|.. ++.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~- 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF- 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-
Confidence 4678999999999988877678999999988 53333 2333344678999999999877776667889999988 553
Q ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEE
Q 016982 90 PTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCR 169 (379)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~ 169 (379)
..+........+..+++.++++++++...++.|..++.. +. ............+.++++.++++++++...++.|.
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT---IYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC---EEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 223322234678999999999887777667888888766 43 22221122446789999999999777766678899
Q ss_pred EEeccccccccccccCCCccCCcccceEE-EeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecC
Q 016982 170 VFSTFIKGVDIKEKKEGTSSDTKFGEQIL-QLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDL 248 (379)
Q Consensus 170 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 248 (379)
.+|. .++... ........+..++++++|++.++....+.|.+||. ++............
T Consensus 171 ~~~~-------------------~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 230 (300)
T 2qc5_A 171 RITN-------------------TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNA 230 (300)
T ss_dssp EECT-------------------TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred EECC-------------------CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCC
Confidence 9974 122211 12223446889999999988777777788999997 33322122222345
Q ss_pred CeeeEEEecCCcEEEEEe-CCCeEEEEe
Q 016982 249 PLRDVLFVSEKMVIGVGF-DCNPMVFAA 275 (379)
Q Consensus 249 ~i~~~~~s~~~~~l~~~~-d~~~~i~~~ 275 (379)
.+.+++++++|+++++.. ++.+..|+.
T Consensus 231 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 231 RPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CceEEEECCCCCEEEeccCCCeEEEECC
Confidence 678999999998777654 466766654
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=2.2e-15 Score=141.48 Aligned_cols=232 Identities=13% Similarity=0.047 Sum_probs=145.0
Q ss_pred CCCCcEEEEEecCCe---EEEEEec-----CCceEEEEE----eccCCCceEEEEEcCCCCEEEEEeCC-----CeEEEE
Q 016982 19 SPDHAMVAFCPNNNE---VHIYKLI-----QEKWEKLHV----LQKHDQIVSGIDWSVRSNRIVTVSHD-----RNSYVW 81 (379)
Q Consensus 19 s~~~~~l~~~~~dg~---i~i~~~~-----~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw 81 (379)
+|+|++++....++. -.+|... +++.+.+.. -.+|...+..++|||||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489999887765432 4555543 332222211 12233468899999999999877643 369999
Q ss_pred eccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCe--------------EEEEEeecCCceeEEEEEee--cCCc
Q 016982 82 NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT--------------VCICYYEQENNWWVSKLIRK--RHDS 145 (379)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------v~i~~~~~~~~~~~~~~~~~--~~~~ 145 (379)
|+.+++..... .+...+..++|+|| +.|+.++.++. |++|++.++... ...+.. .+..
T Consensus 195 dl~tg~~~~~~---~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~--~~lv~~~~~~~~ 268 (741)
T 1yr2_A 195 GVADGKPLADE---LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA--DQPVFATPELPK 268 (741)
T ss_dssp ETTTCCEEEEE---EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG--CEEEECCTTCTT
T ss_pred ECCCCCCCCcc---CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh--CEEEeccCCCCe
Confidence 99999854431 11223468899999 99998887654 778887655421 112212 2233
Q ss_pred CEEEEEEcCCCcEEEEeeCCC-----eEEEEeccccccccccccCCCccCCccc--ceEEEeecCCcceEEEEECCCCCE
Q 016982 146 SVTSVAWHPNNVFLATTSTDG-----KCRVFSTFIKGVDIKEKKEGTSSDTKFG--EQILQLDLSFSWAFGVKWSPSGNT 218 (379)
Q Consensus 146 ~v~~~~~~p~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~ 218 (379)
.+..+.|+|||++|+..+.++ .|.+||+ ..+ ++...+..+...+.... +|+|+.
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~------------------~~~~~~~~~~l~~~~~~~~~~~-~~dg~~ 329 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARV------------------TNGKIGPVTALIPDLKAQWDFV-DGVGDQ 329 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEE------------------ETTEECCCEEEECSSSSCEEEE-EEETTE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEEC------------------CCCCCcccEEecCCCCceEEEE-eccCCE
Confidence 588999999999888777543 7999986 222 21344444444444443 488988
Q ss_pred EEEEcC----CCeEEEEECCCC-CceeeeeeeecCCeeeEEEecCCcEEE-EEeCCCeEEEEec
Q 016982 219 LAYVGH----NSMIYFVDDVGP-SPLAQNVAFRDLPLRDVLFVSEKMVIG-VGFDCNPMVFAAD 276 (379)
Q Consensus 219 l~~~~~----d~~i~v~d~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~d~~~~i~~~~ 276 (379)
|+..+. ++.|.+||+.++ ......+..+...+..++|+ ++.+++ ...++...+|..+
T Consensus 330 l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 330 LWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 887765 356999998774 23323344444456677887 455555 5567777777655
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=7.7e-15 Score=120.46 Aligned_cols=243 Identities=9% Similarity=-0.056 Sum_probs=160.8
Q ss_pred ceEEEEEcCCCCEEE-EEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCcee
Q 016982 56 IVSGIDWSVRSNRIV-TVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWW 134 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~ 134 (379)
...+++++++|+.++ +...++.|.+|+..+...... .......+.+++++++++++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~--- 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL--PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN--- 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC--CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC---
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE--eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce---
Confidence 568899999998666 446778999999766542111 122335678999999998666555 8899998876554
Q ss_pred EEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECC
Q 016982 135 VSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSP 214 (379)
Q Consensus 135 ~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 214 (379)
...+.......+..++++|+++++++...++.|.+|+. ...............+..++++|
T Consensus 99 -~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~------------------~~~~~~~~~~~~~~~p~~i~~~~ 159 (270)
T 1rwi_B 99 -QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA------------------GSKTQTVLPFTGLNDPDGVAVDN 159 (270)
T ss_dssp -CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECT------------------TCCSCEECCCCSCCSCCCEEECT
T ss_pred -EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEEC------------------CCceeEeeccccCCCceeEEEeC
Confidence 22221233357899999999998887777889999974 11111111112223567899999
Q ss_pred CCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEe-CCCeEEEEecCCCcEEEEEEecccccC
Q 016982 215 SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGF-DCNPMVFAADETGIWTFIKFLDERKTS 293 (379)
Q Consensus 215 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~~~i~~~~~~~~~~~~~~~~~~~~~ 293 (379)
+|+++++...++.|.+||....... .........+.+++++++|.++++.. ++.+.+|+.+......
T Consensus 160 ~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~----------- 227 (270)
T 1rwi_B 160 SGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV----------- 227 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-----------
T ss_pred CCCEEEEECCCCEEEEEecCCCceE-eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-----------
Confidence 9997777777889999998765422 22222225678999999998777654 5577777654322111
Q ss_pred CCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEEEEeCCCccc
Q 016982 294 SSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIVTWDLESQED 373 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~iW~~~~~~~ 373 (379)
....+...+.+++ +.+++ +++++...++.|+++++...+.
T Consensus 228 -----------------------------------~~~~~~~~p~~i~-~~~~g----~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 228 -----------------------------------LPFTGLNTPLAVA-VDSDR----TVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp -----------------------------------CCCCSCSCEEEEE-ECTTC----CEEEEEGGGTEEEEECCCGGGS
T ss_pred -----------------------------------eccCCCCCceeEE-ECCCC----CEEEEECCCCEEEEEcCCCccc
Confidence 0012334577888 66655 8889999999999999987665
Q ss_pred cc
Q 016982 374 LL 375 (379)
Q Consensus 374 ~~ 375 (379)
.+
T Consensus 268 ~~ 269 (270)
T 1rwi_B 268 HH 269 (270)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=3.2e-15 Score=126.26 Aligned_cols=268 Identities=6% Similarity=0.014 Sum_probs=174.0
Q ss_pred cCCeEEEEEecCCceEEEEEec------cCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeE
Q 016982 30 NNNEVHIYKLIQEKWEKLHVLQ------KHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALC 103 (379)
Q Consensus 30 ~dg~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~ 103 (379)
.++.|.++|.+++ +....+. ........+.+. +++..++...++.|.+||..+++.+..+. .......
T Consensus 15 ~~~~l~~~d~~t~--~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~---~~~~p~~ 88 (328)
T 3dsm_A 15 SNATLSYYDPATC--EVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT---GFTSPRY 88 (328)
T ss_dssp CCBEEEEEETTTT--EEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE---CCSSEEE
T ss_pred CCceEEEEECCCC--EEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC---CCCCCcE
Confidence 3789999999987 3333321 112345677774 34455555667899999999998666552 3467889
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecC----CcCEEEEEEcCCCcEEEEee-CCCeEEEEecccccc
Q 016982 104 VQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH----DSSVTSVAWHPNNVFLATTS-TDGKCRVFSTFIKGV 178 (379)
Q Consensus 104 ~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~l~~~~-~d~~i~v~d~~~~~~ 178 (379)
++++++++.+++...++.|.+||..+.+ +...+..+. ......+++ .+++.+++.. .++.|.++|+
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~---~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~----- 159 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYE---ITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT----- 159 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTE---EEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET-----
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCe---EEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC-----
Confidence 9998888544444478999999988776 344442222 013456677 3455555543 4889999996
Q ss_pred ccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC----------CeEEEEECCCCCceeeeeeee-c
Q 016982 179 DIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN----------SMIYFVDDVGPSPLAQNVAFR-D 247 (379)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----------~~i~v~d~~~~~~~~~~~~~~-~ 247 (379)
.+++.+..+... .....++++|+|++++++..+ +.|.++|..+.+ +...+... .
T Consensus 160 -------------~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-v~~~~~~~~g 224 (328)
T 3dsm_A 160 -------------ETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-VEKQFKFKLG 224 (328)
T ss_dssp -------------TTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-EEEEEECCTT
T ss_pred -------------CCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-EEEEEecCCC
Confidence 556666666543 335788999999977776554 789999988765 33444322 3
Q ss_pred CCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccccccccc
Q 016982 248 LPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSR 327 (379)
Q Consensus 248 ~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (379)
.....++|+|+++.|..+.. .+.+|+........ ..+
T Consensus 225 ~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~-------------------------~~~----------------- 261 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPV-------------------------RPF----------------- 261 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCS-------------------------SCS-----------------
T ss_pred CCceeEEEecCCCEEEEEcc-EEEEEECCCCceee-------------------------eee-----------------
Confidence 46789999999888776544 66666543322100 000
Q ss_pred ccccccccceeeeeeecccCCcccceEEEe----ecCceEEEEeCCCccccccC
Q 016982 328 TRGGTHVNCINCIVPLREAGSSRITRFTTS----GLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 328 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~----~~Dg~v~iW~~~~~~~~~~~ 377 (379)
+..+.....+++ +++++ +.++++. ..++.|.+||.. ++.++.+
T Consensus 262 --~~~~~~~p~gi~-vdp~~---g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 262 --LEFRDTKYYGLT-VNPNN---GEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp --BCCCSSCEEEEE-ECTTT---CCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred --ecCCCCceEEEE-EcCCC---CeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 011234567788 66532 3677777 678999999997 7777654
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=2.8e-14 Score=119.87 Aligned_cols=247 Identities=10% Similarity=-0.000 Sum_probs=158.3
Q ss_pred CcceeEEEeCCCCcEEEE-------EecCCeEEEEEecCCceEEEEE--eccCCCceEEEEEcCC-CCEEEEEeCCCeEE
Q 016982 10 AQCITCHAWSPDHAMVAF-------CPNNNEVHIYKLIQEKWEKLHV--LQKHDQIVSGIDWSVR-SNRIVTVSHDRNSY 79 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~-------~~~dg~i~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~ 79 (379)
-....+++|+++|+++++ +..++.|.+|+..+++...... ..++...+.+++++++ ++++++ +....|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEE
Confidence 346789999999988887 5778999999987764332221 0124457889999999 654544 4445799
Q ss_pred EEeccCCceeee-EEee--cCCCceeEEEECCCCCEEEEEeCC---------------CeEEEEEeecCCceeEEEEEee
Q 016982 80 VWNQEGSEWVPT-LVIL--RLNRAALCVQWSPKENKFAVGSGA---------------KTVCICYYEQENNWWVSKLIRK 141 (379)
Q Consensus 80 vw~~~~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~l~~~~~d---------------~~v~i~~~~~~~~~~~~~~~~~ 141 (379)
+||.. ++.... .... .....+.+++++++|+++++...+ +.|..++.. +. ... + .
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~~-~-~ 168 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ---MIQ-V-D 168 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC---EEE-E-E
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC---EEE-e-c
Confidence 99988 654322 1100 112357899999999877776554 445555433 22 222 2 2
Q ss_pred cCCcCEEEEEEc----CCCcEEEEe-eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCC-cceEEEEECCC
Q 016982 142 RHDSSVTSVAWH----PNNVFLATT-STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF-SWAFGVKWSPS 215 (379)
Q Consensus 142 ~~~~~v~~~~~~----p~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~sp~ 215 (379)
.+......++|+ |+++.+..+ ..++.|.+||+.... . .........+..+. ..+..++++++
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g------~------~~~~~~~~~~~~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA------K------IENKKVWGHIPGTHEGGADGMDFDED 236 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT------E------EEEEEEEEECCCCSSCEEEEEEEBTT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC------c------cccceEEEECCCCCCCCCCceEECCC
Confidence 233456889999 999655544 567899999862000 0 00011223333333 56788999999
Q ss_pred CCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEe--CCCeEEEEecC
Q 016982 216 GNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGF--DCNPMVFAADE 277 (379)
Q Consensus 216 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~~~i~~~~~ 277 (379)
|+++++...++.|.+||..+++. ...+..+...+.+++|+++|+.|..+. ++.+..|+...
T Consensus 237 G~l~v~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 237 NNLLVANWGSSHIEVFGPDGGQP-KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CCEEEEEETTTEEEEECTTCBSC-SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEcCCCEEEEEcCCCCcE-eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99888877888999999875543 344554556789999999998554333 34676666543
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=1.7e-14 Score=121.80 Aligned_cols=235 Identities=11% Similarity=0.009 Sum_probs=160.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
.....+++. +++++++...++.|.+||..++ +.+.++.. ......++++++++..++...++.|.+||..+++...
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~--~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF--KEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC--CEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECccc--EEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 445677774 3555566666799999999987 55555543 3567899999998444444378999999999988665
Q ss_pred eEEeec---CCCceeEEEECCCCCEEEEEe--CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC
Q 016982 91 TLVILR---LNRAALCVQWSPKENKFAVGS--GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD 165 (379)
Q Consensus 91 ~~~~~~---~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d 165 (379)
.+.... .......+++ ++..++++. .++.|.++|..+.+ ....+ .. ......+.++|+|++++++..+
T Consensus 120 ~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~---~~~~i-~~-g~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDK---VVDEL-TI-GIQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTE---EEEEE-EC-SSCBCCCEECTTSEEEEEBCCB
T ss_pred EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCe---EEEEE-Ec-CCCccceEEcCCCCEEEEECCC
Confidence 554321 0014567777 345555554 48899999988876 34444 22 2345678999999977776654
Q ss_pred ----------CeEEEEeccccccccccccCCCccCCcccceEEEeecC-CcceEEEEECCCCCEEEEEcCCCeEEEEECC
Q 016982 166 ----------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS-FSWAFGVKWSPSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 166 ----------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~ 234 (379)
+.|.++|. .+++....+... ......++|+|++++|+++.. .|.+||..
T Consensus 193 ~~~~~~~~~~~~v~~id~------------------~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDA------------------ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp CTTCSSCBCCCEEEEEET------------------TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred ccCCccccCCceEEEEEC------------------CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 78999996 455555555432 235789999999999888765 89999988
Q ss_pred CCCceeee-eeeecCCeeeEEEec-CCcEEEEE-----eCCCeEEEEec
Q 016982 235 GPSPLAQN-VAFRDLPLRDVLFVS-EKMVIGVG-----FDCNPMVFAAD 276 (379)
Q Consensus 235 ~~~~~~~~-~~~~~~~i~~~~~s~-~~~~l~~~-----~d~~~~i~~~~ 276 (379)
+++..... +.........++++| +++++++. .++.+.+|+.+
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 76532111 221245678999999 56666654 46678888876
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.71 E-value=1.2e-13 Score=124.14 Aligned_cols=241 Identities=11% Similarity=0.043 Sum_probs=161.6
Q ss_pred CCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc--CCceeeeEEeecC
Q 016982 20 PDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE--GSEWVPTLVILRL 97 (379)
Q Consensus 20 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~~~ 97 (379)
|.+.++++...++.|.++|..++ +.+..+... ..+..+.|+|||+++++++.|+.|.+||+. +.+.+..+. .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~--~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~---~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY--EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK---I 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC--CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE---C
T ss_pred CCceEEEEeCCCCeEEEEECCCC--eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe---c
Confidence 34456667777899999999987 566666543 356799999999999999999999999995 666554443 2
Q ss_pred CCceeEEEEC----CCCCEEEEEeC-CCeEEEEEeecCCceeEEEEEee-c--------C-CcCEEEEEEcCCCcE-EEE
Q 016982 98 NRAALCVQWS----PKENKFAVGSG-AKTVCICYYEQENNWWVSKLIRK-R--------H-DSSVTSVAWHPNNVF-LAT 161 (379)
Q Consensus 98 ~~~v~~~~~~----~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~-~--------~-~~~v~~~~~~p~~~~-l~~ 161 (379)
......++|+ |+|+++++++. ++.+.++|..+.+ ..+.+.. + | ...+..+..++++.. ++.
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~---~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE---PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC---EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc---EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 3456899999 69999888776 5899999977766 3333311 1 1 226788888888654 445
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCcee
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLA 240 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~ 240 (379)
...+|.|.++|... .....+..+.. ......+.|+|+|++++++. .++.|.++|+.+++ +.
T Consensus 316 ~~~~g~v~~vd~~~----------------~~~~~v~~i~~-~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k-l~ 377 (567)
T 1qks_A 316 VKETGKILLVDYTD----------------LNNLKTTEISA-ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK-LV 377 (567)
T ss_dssp ETTTTEEEEEETTC----------------SSEEEEEEEEC-CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE-EE
T ss_pred ecCCCeEEEEecCC----------------Cccceeeeeec-cccccCceECCCCCEEEEEeCCCCeEEEEECCCCc-EE
Confidence 55679999998620 00111223322 33467889999999987655 67899999999875 33
Q ss_pred eeeee-ec--CCeeeEE-EecC-CcEEEEE--eCCCeEEEEecCCC----cEEEEEEe
Q 016982 241 QNVAF-RD--LPLRDVL-FVSE-KMVIGVG--FDCNPMVFAADETG----IWTFIKFL 287 (379)
Q Consensus 241 ~~~~~-~~--~~i~~~~-~s~~-~~~l~~~--~d~~~~i~~~~~~~----~~~~~~~~ 287 (379)
..+.. .. .+-..+. ++|+ +.+.+++ .++.+.+++.+..+ .|++.+.+
T Consensus 378 ~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 378 AIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 44432 11 1112333 4776 4555555 35788898877532 26655543
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=1.9e-13 Score=113.88 Aligned_cols=236 Identities=7% Similarity=-0.048 Sum_probs=165.6
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCcee
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWV 89 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 89 (379)
...+.+++++++|+++++...++.|..|+.... ... ..+......+..+++.++++++++...++.|..||. +++..
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGI-IKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-EEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 467899999999998887766789999997632 222 223334557899999999988887777889999998 55432
Q ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEE
Q 016982 90 PTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCR 169 (379)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~ 169 (379)
.+........+..+++.++|+++++...++.|..||. .+. ............+..++++++++++++...++.|.
T Consensus 133 -~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 133 -EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGD---ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp -EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred -EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCc---EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 2222223457899999999988777766788999887 444 22221133455688999999999777776788999
Q ss_pred EEeccccccccccccCCCccCCcccceE-EEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee--eee
Q 016982 170 VFSTFIKGVDIKEKKEGTSSDTKFGEQI-LQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV--AFR 246 (379)
Q Consensus 170 v~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~ 246 (379)
+||. .++.. .....+...+.+++++++|+++++...++.|..||.. +. . ..+ ..+
T Consensus 208 ~~~~-------------------~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~-~-~~~~~~~~ 265 (299)
T 2z2n_A 208 RITT-------------------SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI-I-EEYPIQIK 265 (299)
T ss_dssp EECT-------------------TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE-E-EEEECSSS
T ss_pred EECC-------------------CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc-e-EEEeCCCC
Confidence 9984 12211 1122334568899999999977776678899999983 32 2 222 233
Q ss_pred cCCeeeEEEecCCcEEEEEeCCCeEEEEec
Q 016982 247 DLPLRDVLFVSEKMVIGVGFDCNPMVFAAD 276 (379)
Q Consensus 247 ~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~ 276 (379)
...+.++++ ++|+++++...+.+..++..
T Consensus 266 ~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 266 SAEPHGICF-DGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp SCCEEEEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred CCccceEEe-cCCCEEEEecCCcEEEEEcC
Confidence 456889999 99998887666777766644
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.70 E-value=7e-14 Score=118.09 Aligned_cols=285 Identities=12% Similarity=0.020 Sum_probs=178.9
Q ss_pred EEEeCCCCcEEEEEec-----CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe----------CCCeEE
Q 016982 15 CHAWSPDHAMVAFCPN-----NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS----------HDRNSY 79 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~ 79 (379)
.....|+++.+.+... ++.|.++|..+. +.+..+.....+ . ++++|||++++++. .++.|.
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCC--eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 3556789988877754 579999999887 667777655555 4 99999999887765 357899
Q ss_pred EEeccCCceeeeEEeec-----CCCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEE
Q 016982 80 VWNQEGSEWVPTLVILR-----LNRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAW 152 (379)
Q Consensus 80 vw~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 152 (379)
+||..+.+.+..+.... .......+.|+|||++++++.. ++.|.++|..+.+ +...+.. .+ + ...+
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~---vv~tI~v--~g-~-~~~~ 185 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA---FKRMLDV--PD-C-YHIF 185 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE---EEEEEEC--CS-E-EEEE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc---EEEEEEC--CC-c-ceee
Confidence 99999998777765422 0125678999999999998874 6899999998887 4555411 11 1 1223
Q ss_pred cCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEE----eecCCcce-EEEEEC-CCCCEEEEEcCCC
Q 016982 153 HPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ----LDLSFSWA-FGVKWS-PSGNTLAYVGHNS 226 (379)
Q Consensus 153 ~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v-~~~~~s-p~~~~l~~~~~d~ 226 (379)
....+.+++.+.||.+.+.++.. .++.... +.....++ ....|. ++|++++ .+.+|
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~-----------------~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g 247 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGT-----------------EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTG 247 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCS-----------------SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTS
T ss_pred cCCCceeEEECCCCCEEEEECCC-----------------CCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCC
Confidence 22346677778888888887631 1111111 11111122 124554 6776555 56689
Q ss_pred eEEEEECCCCCc-eeeeee----------eecCCeeeEEEecCCcEEEEEeC-----------CCeEEEEecCCCcEEEE
Q 016982 227 MIYFVDDVGPSP-LAQNVA----------FRDLPLRDVLFVSEKMVIGVGFD-----------CNPMVFAADETGIWTFI 284 (379)
Q Consensus 227 ~i~v~d~~~~~~-~~~~~~----------~~~~~i~~~~~s~~~~~l~~~~d-----------~~~~i~~~~~~~~~~~~ 284 (379)
.|++.|+.+... ....+. ........++++++++.+..... ..+.+++..... +.
T Consensus 248 ~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---v~ 324 (386)
T 3sjl_D 248 KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RL 324 (386)
T ss_dssp EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EE
T ss_pred EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---EE
Confidence 999999876542 112221 11233456778888776654321 234444443332 22
Q ss_pred EEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEeecCceEE
Q 016982 285 KFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSGLDGKIV 364 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~~Dg~v~ 364 (379)
+.+ ..++ .+.+|+ +++|+. ..++++...++.|.
T Consensus 325 ~~i------------------------------------------~vg~--~~~~la-vs~D~~--~~ly~tn~~~~~Vs 357 (386)
T 3sjl_D 325 AKF------------------------------------------EMGH--EIDSIN-VSQDEK--PLLYALSTGDKTLY 357 (386)
T ss_dssp EEE------------------------------------------EEEE--EECEEE-ECSSSS--CEEEEEETTTTEEE
T ss_pred EEE------------------------------------------ECCC--CcceEE-ECCCCC--eEEEEEcCCCCeEE
Confidence 211 0122 577888 777761 12444456799999
Q ss_pred EEeCCCccccccCC
Q 016982 365 TWDLESQEDLLNYH 378 (379)
Q Consensus 365 iW~~~~~~~~~~~~ 378 (379)
++|..+++.++.+.
T Consensus 358 ViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 358 IHDAESGEELRSVN 371 (386)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCcEEEEec
Confidence 99999998877654
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.68 E-value=1.8e-14 Score=135.29 Aligned_cols=240 Identities=10% Similarity=-0.062 Sum_probs=153.4
Q ss_pred cceeEEEeCCCCcEEEEEecC-----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCe--------
Q 016982 11 QCITCHAWSPDHAMVAFCPNN-----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRN-------- 77 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------- 77 (379)
..+..++|||||++||.+..+ ..|++||+.+++... . ..+...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~--~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA--D-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE--E-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC--c-cCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 468899999999999987653 369999999884322 1 112222357899999 99988876553
Q ss_pred ------EEEEeccCCceeeeEEeec--CCCceeEEEECCCCCEEEEEeCCC-----eEEEEEeecCCceeEEEEEeecCC
Q 016982 78 ------SYVWNQEGSEWVPTLVILR--LNRAALCVQWSPKENKFAVGSGAK-----TVCICYYEQENNWWVSKLIRKRHD 144 (379)
Q Consensus 78 ------i~vw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~~ 144 (379)
|++|++.++.....+.... +...+..+.|+|||++|+..+.++ .|++||+.++... ..+.+ ..+.
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~l-~~~~ 316 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG-PVTAL-IPDL 316 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC-CCEEE-ECSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc-ccEEe-cCCC
Confidence 8899998775322222222 223578999999999988877544 7999999876210 02333 3444
Q ss_pred cCEEEEEEcCCCcEEEEeeC----CCeEEEEeccccccccccccCCCccCCccc--ceEEEeecCCcceEEEEECCCCCE
Q 016982 145 SSVTSVAWHPNNVFLATTST----DGKCRVFSTFIKGVDIKEKKEGTSSDTKFG--EQILQLDLSFSWAFGVKWSPSGNT 218 (379)
Q Consensus 145 ~~v~~~~~~p~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~ 218 (379)
..+.... +|+++.|+..+. ++.|.+||+ ..+ .....+..+...+..++++ ++.+
T Consensus 317 ~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~------------------~~~~~~~~~l~~~~~~~l~~~~~~-~~~l 376 (741)
T 1yr2_A 317 KAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDL------------------SGSTPRFDTVVPESKDNLESVGIA-GNRL 376 (741)
T ss_dssp SSCEEEE-EEETTEEEEEECTTCTTCEEEEEEC------------------SSSSCEEEEEECCCSSEEEEEEEE-BTEE
T ss_pred CceEEEE-eccCCEEEEEECCCCCCCEEEEEeC------------------CCCccccEEEecCCCCeEEEEEEE-CCEE
Confidence 4444443 488888887765 345888886 221 2222333444556677887 5667
Q ss_pred EEEEcCCCeEEEEECC-CCCceeeeeeee-cCCeeeEEEecCCcEEE-E-Ee---CCCeEEEEecC
Q 016982 219 LAYVGHNSMIYFVDDV-GPSPLAQNVAFR-DLPLRDVLFVSEKMVIG-V-GF---DCNPMVFAADE 277 (379)
Q Consensus 219 l~~~~~d~~i~v~d~~-~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~-~-~~---d~~~~i~~~~~ 277 (379)
+++...++..++|.+. .+. ....+..+ ...+..+.++|++..|+ + ++ .+.+++|+...
T Consensus 377 v~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 377 FASYIHDAKSQVLAFDLDGK-PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTEEEEEEEETTSC-EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEECCEEEEEEEeCCCC-ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 7777888877766443 222 33445432 45688899999887554 2 22 24566776544
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.67 E-value=2.5e-12 Score=109.98 Aligned_cols=277 Identities=7% Similarity=-0.076 Sum_probs=170.0
Q ss_pred EEeCCCCcEEEEEec--CC---eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe----------CCCeEEE
Q 016982 16 HAWSPDHAMVAFCPN--NN---EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS----------HDRNSYV 80 (379)
Q Consensus 16 ~~~s~~~~~l~~~~~--dg---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~v 80 (379)
+...|+++++.+... .. .|.+||..++ +.+..+.....+ .++++|||++++.+. .++.|.+
T Consensus 26 ~~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~--~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred ccCCCCCCEEEEeCCcccCCccEEEEEECCCC--eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 345578887776643 22 8899999887 566666654444 999999999998875 3678999
Q ss_pred EeccCCceeeeEEee-cC----CCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEE-EeecCCcCEEEEEE
Q 016982 81 WNQEGSEWVPTLVIL-RL----NRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKL-IRKRHDSSVTSVAW 152 (379)
Q Consensus 81 w~~~~~~~~~~~~~~-~~----~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~-~~~~~~~~v~~~~~ 152 (379)
||..+.+.+..+... .. ......+.|+|||++|++++. ++.|.++| .+++ +... + . ... ++.+
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~---~~~~~i-~-~~~---~~~~ 172 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS---SDDQLL-S-SPT---CYHI 172 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC---EEeEEc-C-CCc---eEEE
Confidence 999988766655432 00 123568999999999999874 47899999 7776 3444 3 1 111 2445
Q ss_pred cCCC-cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-----cCCcc-eEEEEECCCCCEEEEEcCC
Q 016982 153 HPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-----LSFSW-AFGVKWSPSGNTLAYVGHN 225 (379)
Q Consensus 153 ~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-v~~~~~sp~~~~l~~~~~d 225 (379)
.|++ +.+++.+.||.+.++|. .++.+.... ....+ .....+.+++..++..+..
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~-------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 233 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDH-------------------AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYS 233 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEEC-------------------CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCC
Confidence 5655 55666778899999984 122221110 11111 2335667766555555578
Q ss_pred CeEEEEECCCCCc-eeeeeeee----------cCCeeeEEEecCCcEEEEEeC-----------CCeEEEEecCCCcEEE
Q 016982 226 SMIYFVDDVGPSP-LAQNVAFR----------DLPLRDVLFVSEKMVIGVGFD-----------CNPMVFAADETGIWTF 283 (379)
Q Consensus 226 ~~i~v~d~~~~~~-~~~~~~~~----------~~~i~~~~~s~~~~~l~~~~d-----------~~~~i~~~~~~~~~~~ 283 (379)
+.+.+.|+..... ....+... ......+.++|+++.+....+ +.+.+++.... ++
T Consensus 234 ~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---~v 310 (373)
T 2mad_H 234 GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---QT 310 (373)
T ss_pred ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---EE
Confidence 8999999875432 11222111 112333667777665543221 23444443322 22
Q ss_pred EEEecccccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccc-eEEEee-cCc
Q 016982 284 IKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRIT-RFTTSG-LDG 361 (379)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~t~~-~Dg 361 (379)
...+ ..++ ...+++ +++|+ + +++++. .++
T Consensus 311 v~~i------------------------------------------~~g~--~p~~i~-~s~Dg----~~~l~v~~~~~~ 341 (373)
T 2mad_H 311 SSQI------------------------------------------SLGH--DVDAIS-VAQDG----GPDLYALSAGTE 341 (373)
T ss_pred EEEE------------------------------------------ECCC--CcCeEE-ECCCC----CeEEEEEcCCCC
Confidence 1111 0122 466788 77776 6 777777 589
Q ss_pred eEEEEeCCCcccccc
Q 016982 362 KIVTWDLESQEDLLN 376 (379)
Q Consensus 362 ~v~iW~~~~~~~~~~ 376 (379)
.|.++|+.+++.++.
T Consensus 342 ~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 342 VLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCCCCEEee
Confidence 999999999888766
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.1e-13 Score=113.54 Aligned_cols=190 Identities=11% Similarity=-0.040 Sum_probs=136.0
Q ss_pred CCCEEEEEeCCCeEEEEeccCCceeeeEEeecCC-CceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecC
Q 016982 65 RSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLN-RAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 143 (379)
Q Consensus 65 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~ 143 (379)
.++.|++++.++.|.+||.++++.+..+. .+. ..+.++.+.|+|++++ +.++.|..||. +++ ..-.+....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~--~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~---~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYP--LEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR---ELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEE--CCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC---EEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeC--CCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC---EEEEEcCCC
Confidence 35789999999999999999998766553 333 4688999999999888 34678999887 555 333341222
Q ss_pred CcCEEEEEEcCCCcEEEEeeC-CCeEEEEeccccccccccccCCCccCCcccceEEEeec------CCcceEEEEECCCC
Q 016982 144 DSSVTSVAWHPNNVFLATTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL------SFSWAFGVKWSPSG 216 (379)
Q Consensus 144 ~~~v~~~~~~p~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~sp~~ 216 (379)
...+.++.+.|+|+++++.+. ++.+..+| ..++.+..+.. +......+++.++|
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd-------------------~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G 136 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVN-------------------MKGEVLSKTEFETGIERPHAQFRQINKNKKG 136 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEEC-------------------TTSCEEEEEEECCSCSSGGGSCSCCEECTTS
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEe-------------------CCCCEEEEEeccCCCCcccccccCceECCCC
Confidence 356888999999999998877 77777776 34555554431 11234566789999
Q ss_pred CEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCC-CeEEEEec-CCCcEEEE
Q 016982 217 NTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDC-NPMVFAAD-ETGIWTFI 284 (379)
Q Consensus 217 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~-~~~i~~~~-~~~~~~~~ 284 (379)
+++++...++.|.+||.. ++ .+..+... ..+.++.+.++|.+++++.++ .+..++.. ..-.|++.
T Consensus 137 ~~lv~~~~~~~v~~~d~~-G~-~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPN-GQ-LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp CEEEEETTTTEEEEECTT-SC-EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CEEEEecCCCEEEEECCC-CC-EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 999999999999999987 55 34555533 456678888999988866655 56666665 33356653
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.66 E-value=8.5e-13 Score=109.80 Aligned_cols=232 Identities=11% Similarity=0.055 Sum_probs=152.8
Q ss_pred CcceeEEEeCCCC-cEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCce
Q 016982 10 AQCITCHAWSPDH-AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW 88 (379)
Q Consensus 10 ~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~ 88 (379)
..-..+..|+|++ .++++...++.|+.||..++.. ..+. ....+.+++++|+|+++++ . +..|.+||..+++.
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV---QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA 85 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE---EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE
Confidence 3456688999954 5566666789999999988632 2222 3467899999999995554 4 56799999988875
Q ss_pred eeeEEeec--CCCceeEEEECCCCCEEEEEeCC---------CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCc
Q 016982 89 VPTLVILR--LNRAALCVQWSPKENKFAVGSGA---------KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 89 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d---------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
........ ....+..++++|+|+++++.... ..-.+|.++.... ... + .........++|+|+++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--~~~-~-~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH--VKK-Y-FDQVDISNGLDWSLDHK 161 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC--EEE-E-EEEESBEEEEEECTTSC
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC--EEE-E-eeccccccceEEcCCCC
Confidence 43332211 12457889999999966654322 3346666664432 222 2 23334568899999998
Q ss_pred EEE-EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Q 016982 158 FLA-TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGP 236 (379)
Q Consensus 158 ~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~ 236 (379)
.|+ +.+.++.|.+|++.. .... ....+....+..+...+..++++++|++.++....+.|..||..++
T Consensus 162 ~lyv~~~~~~~i~~~~~d~-----~~G~------~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDL-----QTGQ------ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEEEGGGTEEEEEEECT-----TTCC------EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred EEEEecCCCCcEEEEeccC-----CCCc------ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 664 455678899998620 0000 0011223333333456789999999998887777889999998766
Q ss_pred CceeeeeeeecCCeeeEEEe-cCCcEEE
Q 016982 237 SPLAQNVAFRDLPLRDVLFV-SEKMVIG 263 (379)
Q Consensus 237 ~~~~~~~~~~~~~i~~~~~s-~~~~~l~ 263 (379)
+ ++..+..+...+++++|. |+++.|.
T Consensus 231 ~-~~~~i~~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 231 K-RLQTVKLPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp C-EEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred e-EEEEEECCCCCceEEEEeCCCCCEEE
Confidence 5 446666555678999998 7876554
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=1.3e-12 Score=108.82 Aligned_cols=235 Identities=6% Similarity=-0.067 Sum_probs=161.5
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..+.+++++++|+++++...++.|..||.. ++.. ...+......+.++++.++++++++...++.|..++.. ++..
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~- 137 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY- 137 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-
Confidence 578899999999988777667899999987 4332 22333344678999999999888777667899999987 5433
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEE
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRV 170 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v 170 (379)
.+........+..+++.++++++++...++.|..++. .+. ............+..++++++++++++....+.|.+
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK---LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc---EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 2222223467899999999996666666788888877 333 222211234457889999999987777766778999
Q ss_pred EeccccccccccccCCCccCCcccceEE-EeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCC
Q 016982 171 FSTFIKGVDIKEKKEGTSSDTKFGEQIL-QLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLP 249 (379)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 249 (379)
|+. .++... .+......+.+++++++|++.++...++.|..||.. +......+......
T Consensus 214 ~~~-------------------~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~ 273 (300)
T 2qc5_A 214 ITT-------------------TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAE 273 (300)
T ss_dssp ECT-------------------TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCC
T ss_pred EcC-------------------CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCc
Confidence 974 122211 122334568899999999977777677899999973 32111122223456
Q ss_pred eeeEEEecCCcEEEEEeCCCeEEEE
Q 016982 250 LRDVLFVSEKMVIGVGFDCNPMVFA 274 (379)
Q Consensus 250 i~~~~~s~~~~~l~~~~d~~~~i~~ 274 (379)
+.+++++++|+++++... .+..++
T Consensus 274 ~~~i~~~~~g~l~v~~~~-~i~~~~ 297 (300)
T 2qc5_A 274 PHGITFGKDGSVWFALKC-KIGKLN 297 (300)
T ss_dssp CCCEEECTTSCEEEECSS-EEEEEE
T ss_pred cceeEeCCCCCEEEEccC-ceEEeC
Confidence 889999999998877663 555444
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=7e-13 Score=115.07 Aligned_cols=233 Identities=11% Similarity=-0.018 Sum_probs=155.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC--eEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR--NSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~ 88 (379)
.....++|+++++++++...++.|++||..++. ....... ..... ++|+|+++.|+++..++ .|.+++..++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 467899999999988887778999999998873 3333333 22334 99999999998888765 788888876643
Q ss_pred eeeE-Eeec-CCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEE----eecCCcCE--EEEEEcCC-CcEE
Q 016982 89 VPTL-VILR-LNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLI----RKRHDSSV--TSVAWHPN-NVFL 159 (379)
Q Consensus 89 ~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~----~~~~~~~v--~~~~~~p~-~~~l 159 (379)
...+ .... ....+.+++++|++..|+++..++.|+.||...... ..+ ..+....- ..++|+|+ +.++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~----~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV----TLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE----EEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE----EEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 2222 1112 346678999999555555677788899998876651 221 11222222 38999995 6666
Q ss_pred EEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC---------------CcceEEEEECCCCCEEEEEc-
Q 016982 160 ATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS---------------FSWAFGVKWSPSGNTLAYVG- 223 (379)
Q Consensus 160 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~sp~~~~l~~~~- 223 (379)
++-..++.|+.|+... . +..+.++ -.....++++|+|+++++-.
T Consensus 283 v~d~~~~~I~~~~~~g-------------------~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~ 342 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDG-------------------E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF 342 (409)
T ss_dssp EEETTTTEEEEECTTC-------------------C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT
T ss_pred EEeCCCCEEEEEecCC-------------------C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC
Confidence 6666788999998631 1 1111111 13478999999999877777
Q ss_pred CCCeEEEEECCCCCceeeeeeee---------------cCCeeeEEEecCCcEEEEEeC-CCeEEE
Q 016982 224 HNSMIYFVDDVGPSPLAQNVAFR---------------DLPLRDVLFVSEKMVIGVGFD-CNPMVF 273 (379)
Q Consensus 224 ~d~~i~v~d~~~~~~~~~~~~~~---------------~~~i~~~~~s~~~~~l~~~~d-~~~~i~ 273 (379)
.++.|+.|++.++. +..+.++ -.....++++++|.++++... +.|+.+
T Consensus 343 ~~~~I~~~~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 343 KGYCLRKLDILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TTCEEEEEETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCEEEEEECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 78999999976653 2344333 134778999999887775543 344443
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.61 E-value=3e-14 Score=120.82 Aligned_cols=173 Identities=10% Similarity=0.085 Sum_probs=130.8
Q ss_pred ceeEEEeCCCCcEEEEEecCCeEEEEEecCCc---------eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 12 CITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK---------WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
+++.+++++...++++|+.+ .+.+|+++.-. .+..... .+.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999999999999887 66779976432 2221222 3556 999999 88999998 789999999
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 162 (379)
+.+....... ..+..++.++.+.+. .+++++.||.|.+||+..... .. +...|+|++|+|+| ++.|
T Consensus 113 v~sl~~~~~~--~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~---~~-----~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 113 LEELSEFRTV--TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST---KQ-----LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSSTTCEEEE--EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE---EE-----EEESEEEEEECSSE--EEEE
T ss_pred chhhhccCcc--ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc---cc-----ccCCceEEEEcCCc--eEEE
Confidence 9877633333 456777888887754 388899999999999987762 21 34589999999999 6778
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccce--EEEe------e---cCCcceEEEEECCCCCEEEEE
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ--ILQL------D---LSFSWAFGVKWSPSGNTLAYV 222 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~---~~~~~v~~~~~sp~~~~l~~~ 222 (379)
..||.+++|+. ...+. ..++ . .|...|.++.|.+++.++++-
T Consensus 179 ~~dg~i~~~~~------------------~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 179 LKDRSFQSFAW------------------RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp ETTSCEEEEEE------------------ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EcCCcEEEEcC------------------CCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 89999999986 22222 3334 2 367889999999999988873
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.61 E-value=5.6e-12 Score=106.26 Aligned_cols=229 Identities=9% Similarity=-0.037 Sum_probs=145.7
Q ss_pred ceeEEEeCCCC-cEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 12 CITCHAWSPDH-AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 12 ~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
-..+.+|+|++ .++++...++.|..|+..+++. ..+. ....+.+++|+|+|+++++. . ..|.+||..+++...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK---TVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE---EEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE---EEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEE
Confidence 35688999975 4556666788999999987632 2222 24578999999999877654 4 459999998887433
Q ss_pred eEEeec--CCCceeEEEECCCCCEEEEEeCC----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-e
Q 016982 91 TLVILR--LNRAALCVQWSPKENKFAVGSGA----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT-S 163 (379)
Q Consensus 91 ~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~ 163 (379)
...... ....+.++.++|+|+++++...+ +...||.++.+. ...+ .........++|+|+++.++.+ +
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~----~~~~-~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK----VTKL-FADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE----EEEE-EEEESSEEEEEECTTSCEEEEEET
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc----EEEe-eCCCcccCCeEEcCCCCEEEEEEC
Confidence 221111 12468899999999976654321 234455554332 2222 2233456789999999866554 4
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeee
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 243 (379)
.++.|.+|++.. ..... ....+.+..+......+..++++++|++.++...++.|.+||. +++ .+..+
T Consensus 199 ~~~~I~~~d~~~-----~~Gl~-----~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~-~~~~i 266 (326)
T 2ghs_A 199 KVNRLMRVPLDA-----RTGLP-----TGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGN-HIARY 266 (326)
T ss_dssp TTCEEEEEEBCT-----TTCCB-----SSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCC-EEEEE
T ss_pred CCCEEEEEEccc-----ccCCc-----ccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCC-EEEEE
Confidence 578899998620 00000 0001222333333455788999999998777666789999997 333 44555
Q ss_pred eeecCCeeeEEEe-cCCcEEE
Q 016982 244 AFRDLPLRDVLFV-SEKMVIG 263 (379)
Q Consensus 244 ~~~~~~i~~~~~s-~~~~~l~ 263 (379)
..+...+.+++|+ +++..|.
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEE
T ss_pred ECCCCCcEEEEEecCCCCEEE
Confidence 5555678999998 8876554
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.60 E-value=1.8e-12 Score=108.35 Aligned_cols=236 Identities=9% Similarity=-0.034 Sum_probs=148.4
Q ss_pred eeccCcceeEEEeCCCCc-EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc
Q 016982 6 VHQFAQCITCHAWSPDHA-MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 84 (379)
+...........|+|+|+ ++++...++.|..|+.. ++ ...+..+...+..++++++|+++++...++.|.+|+..
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT---VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC---EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC---EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 444455677899999998 56666678999999874 42 23344456678999999999876665566789999986
Q ss_pred CCceeeeEEeec--CCCceeEEEECCCCCEEEE----EeC-------------CCeEEEEEeecCCceeEEEEEeecCCc
Q 016982 85 GSEWVPTLVILR--LNRAALCVQWSPKENKFAV----GSG-------------AKTVCICYYEQENNWWVSKLIRKRHDS 145 (379)
Q Consensus 85 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~----~~~-------------d~~v~i~~~~~~~~~~~~~~~~~~~~~ 145 (379)
++......... ....+..+++.|+|+++++ |.. .+.|..+|..++.. ..+ . ...
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----~~~-~-~~~ 188 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----QRM-A-DLD 188 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC----EEE-E-EES
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE----EEE-e-cCC
Confidence 54322211111 1134678999999998876 332 23455555444442 222 2 234
Q ss_pred CEEEEEEcCCCcEEEEeeCC------CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEE
Q 016982 146 SVTSVAWHPNNVFLATTSTD------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTL 219 (379)
Q Consensus 146 ~v~~~~~~p~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 219 (379)
....++|+|+++.|+.+... +.|.+|++..... ...+... ....+....++++++|++.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l-------------~~~~~~~--~~~~~~pdgi~~d~~G~lw 253 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL-------------HDRRHFA--SVPDGLPDGFCVDRGGWLW 253 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE-------------EEEEEEE--CCSSSCCCSEEECTTSCEE
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc-------------cCCeEEE--ECCCCCCCeEEECCCCCEE
Confidence 56789999999977776654 6899998621000 0001111 1123345678999999955
Q ss_pred EEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEE
Q 016982 220 AYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMV 272 (379)
Q Consensus 220 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i 272 (379)
++ .. +.|.+|+.. ++ .+..+..+. .+.+++|+++++.|..+..+.+..
T Consensus 254 v~-~~-~gv~~~~~~-g~-~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 254 SS-SG-TGVCVFDSD-GQ-LLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EC-CS-SEEEEECTT-SC-EEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred Ee-cC-CcEEEECCC-CC-EEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 44 44 459999974 33 334554433 588999999888777555555443
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.59 E-value=5.3e-12 Score=108.62 Aligned_cols=276 Identities=11% Similarity=0.027 Sum_probs=173.7
Q ss_pred CCCcEEEEEecC-----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEecc
Q 016982 20 PDHAMVAFCPNN-----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS----------HDRNSYVWNQE 84 (379)
Q Consensus 20 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vw~~~ 84 (379)
++++++++.... +.|.++|..+. +.+..+..-..+ .++++||+++|+++. .++.|.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 467766665442 69999999987 677777655555 899999999887775 36789999999
Q ss_pred CCceeeeEEeecC-----CCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC-
Q 016982 85 GSEWVPTLVILRL-----NRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN- 156 (379)
Q Consensus 85 ~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~- 156 (379)
+.+.+..+.+.+. ......+.|+|||++++++.. ++.|.+.|..+.+ +...+.... . ....|++
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k---vv~~I~v~g---~--~~~~p~g~ 229 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT---FDRMLDVPD---C--YHIFPASP 229 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE---EEEEEECCS---E--EEEEEEET
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe---EEEEEEcCC---c--eeeccCCC
Confidence 9987776654201 234578999999999999874 5789999988877 444442211 1 2233333
Q ss_pred cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEE----EeecCCcc-eEEEEECCCCCEEEEEcCCCeEEEE
Q 016982 157 VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL----QLDLSFSW-AFGVKWSPSGNTLAYVGHNSMIYFV 231 (379)
Q Consensus 157 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-v~~~~~sp~~~~l~~~~~d~~i~v~ 231 (379)
+.+++.+.||.+.+.+.. .++... .+.....+ ...+.|.+++..++..+..+.+.+.
T Consensus 230 ~~~v~~~~dG~~~~V~~~------------------~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~Vi 291 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFA------------------DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQA 291 (426)
T ss_dssp TEEEEEETTSSEEEEECC------------------TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEE
T ss_pred cEEEEEcCCCCEEEEECC------------------CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEE
Confidence 455556667776666641 111111 11111111 1235779998888777888999999
Q ss_pred ECCCCCcee-eeee----------eecCCeeeEEEecCCcEEEEEe-----------CCCeEEEEecCCCcEEEEEEecc
Q 016982 232 DDVGPSPLA-QNVA----------FRDLPLRDVLFVSEKMVIGVGF-----------DCNPMVFAADETGIWTFIKFLDE 289 (379)
Q Consensus 232 d~~~~~~~~-~~~~----------~~~~~i~~~~~s~~~~~l~~~~-----------d~~~~i~~~~~~~~~~~~~~~~~ 289 (379)
|+......+ ..+. ........++++|+++.+.... .+.+.+++.........+.
T Consensus 292 D~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~---- 367 (426)
T 3c75_H 292 DLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE---- 367 (426)
T ss_dssp EECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE----
T ss_pred eccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE----
Confidence 986543111 1110 0112233478999877555321 2346666655433222111
Q ss_pred cccCCCCCccCCCcccccceeeccccccCcccccccccccccccccceeeeeeecccCCcccc-eEEEee-cCceEEEEe
Q 016982 290 RKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRIT-RFTTSG-LDGKIVTWD 367 (379)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~t~~-~Dg~v~iW~ 367 (379)
.+. ...+++ +++++ + +++++. .++.|.++|
T Consensus 368 -----------------------------------------vg~--~P~gia-~spDg----~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 368 -----------------------------------------LGH--EIDSIN-VSQDA----EPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp -----------------------------------------EEE--EECEEE-ECCSS----SCEEEEEETTTTEEEEEE
T ss_pred -----------------------------------------CCC--CcCeEE-EccCC----CEEEEEEcCCCCeEEEEE
Confidence 111 366777 77776 6 777776 699999999
Q ss_pred CCCccccccC
Q 016982 368 LESQEDLLNY 377 (379)
Q Consensus 368 ~~~~~~~~~~ 377 (379)
+.+++.++.+
T Consensus 400 ~~t~kvv~tI 409 (426)
T 3c75_H 400 AATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCCEEEEe
Confidence 9999887664
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=2e-12 Score=109.73 Aligned_cols=173 Identities=10% Similarity=0.004 Sum_probs=129.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCc---------eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEE
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSE---------WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~ 126 (379)
+++.+++++...++++|+.++ +.+|++...+ ..+... ..+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999874 6679875433 222122 24566 999999 89999999 789999999
Q ss_pred eecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcc
Q 016982 127 YEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSW 206 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (379)
+..... .... ..+...+.++.+.+. .+++++.||.+.+||+ ..+.... +...
T Consensus 113 v~sl~~---~~~~-~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl------------------~~~~~~~----~~~~ 164 (388)
T 1xip_A 113 LEELSE---FRTV-TSFEKPVFQLKNVNN--TLVILNSVNDLSALDL------------------RTKSTKQ----LAQN 164 (388)
T ss_dssp SSSTTC---EEEE-EECSSCEEEEEECSS--EEEEEETTSEEEEEET------------------TTCCEEE----EEES
T ss_pred chhhhc---cCcc-ceeecceeeEEecCC--CEEEEECCCCEEEEEc------------------cCCcccc----ccCC
Confidence 987763 2233 466777888877654 3888899999999997 3333322 2346
Q ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCCce-eeee------e---eecCCeeeEEEecCCcEEEE
Q 016982 207 AFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL-AQNV------A---FRDLPLRDVLFVSEKMVIGV 264 (379)
Q Consensus 207 v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~------~---~~~~~i~~~~~s~~~~~l~~ 264 (379)
|++++|||+| ++.+..||.+++|+....... ...+ . .|...|.++.|.+++.++++
T Consensus 165 Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 165 VTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999999999 677889999999987665410 2334 2 25678999999999998874
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=2.3e-11 Score=104.04 Aligned_cols=236 Identities=7% Similarity=-0.039 Sum_probs=149.7
Q ss_pred EEEeCCCCcEEEEEe----------cCCeEEEEEecCCceEEEEEeccC-------CCceEEEEEcCCCCEEEEEeC--C
Q 016982 15 CHAWSPDHAMVAFCP----------NNNEVHIYKLIQEKWEKLHVLQKH-------DQIVSGIDWSVRSNRIVTVSH--D 75 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d 75 (379)
.++++|||++++++. .++.|.+||..+. +.+..+... ......++|+|||++|+++.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~--~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC--cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCC
Confidence 899999999998875 3578999999875 444443221 123458999999999998874 4
Q ss_pred CeEEEEeccCCceeee-EEeecCCCceeEEEECCCC-CEEEEEeCCCeEEEEEeecCCceeEEE--EEeecCCcC-EEEE
Q 016982 76 RNSYVWNQEGSEWVPT-LVILRLNRAALCVQWSPKE-NKFAVGSGAKTVCICYYEQENNWWVSK--LIRKRHDSS-VTSV 150 (379)
Q Consensus 76 ~~i~vw~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~~~~~-v~~~ 150 (379)
+.|.++| .+++.... +. ... ++.+.|++ +.+++.+.||.+.+++. +++...... .. .....+ ....
T Consensus 148 ~~v~viD-~t~~~~~~~i~---~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~-~~~~~p~~~~~ 218 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLS---SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM-LTAAQNLLTQP 218 (373)
T ss_pred CeEEEEE-CCCCEEeEEcC---CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccc-ccCCcceeecc
Confidence 7899999 98876554 32 122 24455554 45566677899999998 655211110 00 011112 2334
Q ss_pred EEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec----------CCcceEEEEECCCCCEEE
Q 016982 151 AWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL----------SFSWAFGVKWSPSGNTLA 220 (379)
Q Consensus 151 ~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~sp~~~~l~ 220 (379)
.+.+++..++..+..+.+.+.|+.... ...+..+.. .......+.++|+++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~v~vid~~~~~----------------~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 219 AQANKSGRIVWPVYSGKILQADISAAG----------------ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eeEecCCEEEEEcCCceEEEEeccCCc----------------ceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 566666555555578889999863110 011111110 122244578999998887
Q ss_pred EEcC----------CCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCc-EEEEE--eCCCeEEEEecCCC
Q 016982 221 YVGH----------NSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKM-VIGVG--FDCNPMVFAADETG 279 (379)
Q Consensus 221 ~~~~----------d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~--~d~~~~i~~~~~~~ 279 (379)
++.. .+.|.++|..+.+ .+..+.. .....+++|+|||+ +++++ .++.+.+++.....
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCE-EEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 7543 3589999998876 3456643 44578999999998 55544 37889999877654
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=2.7e-12 Score=107.66 Aligned_cols=240 Identities=10% Similarity=0.058 Sum_probs=150.9
Q ss_pred CceEEEEEcCCCCEEEE-------EeCCCeEEEEeccCCceeeeEE--eecCCCceeEEEECCC-CCEEEEEeCCCeEEE
Q 016982 55 QIVSGIDWSVRSNRIVT-------VSHDRNSYVWNQEGSEWVPTLV--ILRLNRAALCVQWSPK-ENKFAVGSGAKTVCI 124 (379)
Q Consensus 55 ~~v~~~~~~~~~~~l~~-------~~~d~~i~vw~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i 124 (379)
....+++|+++++.+++ ...++.|.+||..+++...... ...+...+..++++++ ++++++. ..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 45679999999987777 5677899999988876432211 0013456889999999 6655444 4457888
Q ss_pred EEeecCCceeEEEE-Eee---cCCcCEEEEEEcCCCcEEEEeeCC---------------CeEEEEeccccccccccccC
Q 016982 125 CYYEQENNWWVSKL-IRK---RHDSSVTSVAWHPNNVFLATTSTD---------------GKCRVFSTFIKGVDIKEKKE 185 (379)
Q Consensus 125 ~~~~~~~~~~~~~~-~~~---~~~~~v~~~~~~p~~~~l~~~~~d---------------~~i~v~d~~~~~~~~~~~~~ 185 (379)
||.+ +. .... ... .....+.+++++|+++++++...+ +.|..++.
T Consensus 97 ~d~~-g~---~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------ 160 (314)
T 1pjx_A 97 VQTD-GT---FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT------------ 160 (314)
T ss_dssp EETT-SC---EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT------------
T ss_pred EeCC-CC---EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECC------------
Confidence 8877 44 2222 100 112457899999999887776554 45666653
Q ss_pred CCccCCcccceEEEeecCCcceEEEEEC----CCCCEEEEE-cCCCeEEEEECC-CCCc----eeeeeeeec-CCeeeEE
Q 016982 186 GTSSDTKFGEQILQLDLSFSWAFGVKWS----PSGNTLAYV-GHNSMIYFVDDV-GPSP----LAQNVAFRD-LPLRDVL 254 (379)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l~~~-~~d~~i~v~d~~-~~~~----~~~~~~~~~-~~i~~~~ 254 (379)
. ++... +..+......++|+ |+++.|+.+ ..++.|.+||+. .+.. ....+..+. ..+..++
T Consensus 161 ------~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 161 ------D-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp ------T-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred ------C-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 1 22222 22222346789999 999765544 567899999976 2221 112222222 4578899
Q ss_pred EecCCcEEEEE-eCCCeEEEEecCCCcEEEEEEecccccCCCCCccCCCcccccceeeccccccCccccccccccccccc
Q 016982 255 FVSEKMVIGVG-FDCNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTH 333 (379)
Q Consensus 255 ~s~~~~~l~~~-~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 333 (379)
++++|+++++. .++.+..|+.+........ ..+
T Consensus 233 ~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~----------------------------------------------~~~ 266 (314)
T 1pjx_A 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRI----------------------------------------------RCP 266 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSEEE----------------------------------------------ECS
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCCcEeEEE----------------------------------------------eCC
Confidence 99999988765 4567777764422111110 123
Q ss_pred ccceeeeeeecccCCcccc-eEEEeecCceEEEEeCCC
Q 016982 334 VNCINCIVPLREAGSSRIT-RFTTSGLDGKIVTWDLES 370 (379)
Q Consensus 334 ~~~v~~~~~~~~~~~~~~~-~l~t~~~Dg~v~iW~~~~ 370 (379)
...+.+++ +++++ + ++++...++.|..|++..
T Consensus 267 ~~~~~~i~-~~~dg----~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 267 FEKPSNLH-FKPQT----KTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SSCEEEEE-ECTTS----SEEEEEETTTTEEEEEECSS
T ss_pred CCCceeEE-ECCCC----CEEEEEeCCCCeEEEEeCCC
Confidence 45688888 66665 6 566666778999999875
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=4.5e-12 Score=107.68 Aligned_cols=242 Identities=10% Similarity=0.011 Sum_probs=149.6
Q ss_pred cCcceeEEEeCCCCcEEEEEec--CCeEEEEEecCCceEEEEEec-------cCCCceEEEEEcCCCCEEEEEeC-----
Q 016982 9 FAQCITCHAWSPDHAMVAFCPN--NNEVHIYKLIQEKWEKLHVLQ-------KHDQIVSGIDWSVRSNRIVTVSH----- 74 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~----- 74 (379)
+...+..++++|+|+++++... ++.++||.+.++ + +..+. .+-..+..++++++++++++-..
T Consensus 15 ~~~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g--~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 15 LSLAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD--G-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp ESSCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT--E-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred cCCCcceEEECCCCCEEEEeCCCCCCceEEEEECCC--C-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 3468899999999999888642 343566666544 2 22222 24467899999999876555433
Q ss_pred CCeEEEEeccCCceeeeEEeec----CCCceeEEEECCCCCEE-EEEe---CCCeEEEEEeecCCceeEEEEEeecC---
Q 016982 75 DRNSYVWNQEGSEWVPTLVILR----LNRAALCVQWSPKENKF-AVGS---GAKTVCICYYEQENNWWVSKLIRKRH--- 143 (379)
Q Consensus 75 d~~i~vw~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l-~~~~---~d~~v~i~~~~~~~~~~~~~~~~~~~--- 143 (379)
++.|.+||+.+++....+.+.. +...+..+++++++..+ ++.. .++.|.+||+.++.. .+.+ ..|
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~---~r~~-~~~~~~ 167 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA---ARVL-QGYPGI 167 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE---EEEC-TTCTTT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE---EEEe-cCCCcc
Confidence 5789999999888666554321 22356899999865444 4444 578899999876652 2222 111
Q ss_pred --------------------------CcCEEEEEEcCCCcEEEEeeCCC-eEEEEeccccccccccccCCCccCCcccce
Q 016982 144 --------------------------DSSVTSVAWHPNNVFLATTSTDG-KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ 196 (379)
Q Consensus 144 --------------------------~~~v~~~~~~p~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (379)
...+..++|+|+++.|+.+...+ .+..++... .+.... ...+....
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~----~~~~~~---~~~~~~~~ 240 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD----LSNLQL---TDAELGSK 240 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH----HTCTTC---CHHHHHTT
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH----hcCCCC---Chhhhhcc
Confidence 12368899999998888877665 444443210 000000 00000000
Q ss_pred EEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeee-ecCCeeeEEEecCCcEEEEEe
Q 016982 197 ILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF-RDLPLRDVLFVSEKMVIGVGF 266 (379)
Q Consensus 197 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~ 266 (379)
+.. .++......++++++|.++++...++.|.+||..++. ....... ....+.+++|.++|++++++.
T Consensus 241 ~~~-~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 241 IER-YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CEE-EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred eEe-cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 111 1223345679999999999988889999999974443 2122221 234578999999988777554
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=1.1e-10 Score=101.30 Aligned_cols=194 Identities=9% Similarity=-0.064 Sum_probs=124.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--eEEEEEeecCCce
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK--TVCICYYEQENNW 133 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~ 133 (379)
....|+|+++++++++...++.|++||..++....... . ..... ++|+|+++.|+++..++ .|.+++.......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--G-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--T-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--c-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 56789999999877777777899999998887544332 2 23334 99999999998888766 6777776554321
Q ss_pred eEEEEEeec-CCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEE----eecCCcce-
Q 016982 134 WVSKLIRKR-HDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ----LDLSFSWA- 207 (379)
Q Consensus 134 ~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v- 207 (379)
.....+ .. ....+.+++++|++..|+.+..++.|+.||.. .+..... ..+....-
T Consensus 208 ~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~------------------~~~~~~~~~~~~~g~~~~~P 268 (409)
T 3hrp_A 208 TRIGQL-GSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVK------------------TQEVTLIKQLELSGSLGTNP 268 (409)
T ss_dssp EEEEEC-CTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETT------------------TCCEEEEEECCCCSCCCCSS
T ss_pred EEeeec-cchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECC------------------CCCEEEEecccccCCCCCCc
Confidence 111111 12 44567889999955455556678899999862 2221111 11111211
Q ss_pred -EEEEECCC-CCEEEEEcCCCeEEEEECCCCCceeeeeeeec---------------CCeeeEEEecCCcEEEEEe--CC
Q 016982 208 -FGVKWSPS-GNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD---------------LPLRDVLFVSEKMVIGVGF--DC 268 (379)
Q Consensus 208 -~~~~~sp~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---------------~~i~~~~~s~~~~~l~~~~--d~ 268 (379)
..++|+|+ +.++++-..++.|+.|+.... ...+.++. .....++++++|+++++.. +.
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 28999995 666666667889999987653 12332221 3367899999999776644 45
Q ss_pred CeEEEEe
Q 016982 269 NPMVFAA 275 (379)
Q Consensus 269 ~~~i~~~ 275 (379)
.|+.|+.
T Consensus 346 ~I~~~~~ 352 (409)
T 3hrp_A 346 CLRKLDI 352 (409)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 6666664
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=4e-11 Score=99.65 Aligned_cols=198 Identities=9% Similarity=0.088 Sum_probs=124.6
Q ss_pred ccCCCceEEEEEcCCCCE-EEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeec
Q 016982 51 QKHDQIVSGIDWSVRSNR-IVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQ 129 (379)
Q Consensus 51 ~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~ 129 (379)
.....--.+..|+|+++. +++...++.|..||..+++. .. ......+.+++++++|++++. . ++.|.+||.++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~---~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QR---VTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EE---EECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTT
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EE---EeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCC
Confidence 333445568899996654 45555678999999988763 22 234578999999999995544 4 56788888876
Q ss_pred CCceeEEEEEeec----CCcCEEEEEEcCCCcEEEEeeCC---------CeEEEEeccccccccccccCCCccCCcccce
Q 016982 130 ENNWWVSKLIRKR----HDSSVTSVAWHPNNVFLATTSTD---------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ 196 (379)
Q Consensus 130 ~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (379)
+. .+.+... ....+.+++++|+|+++++.... ..-.||.+. ..++.
T Consensus 83 g~----~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d-----------------~~g~~ 141 (297)
T 3g4e_A 83 QS----AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF-----------------PDHHV 141 (297)
T ss_dssp TE----EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC-----------------TTSCE
T ss_pred Cc----EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE-----------------CCCCE
Confidence 65 2222111 22457899999999976654321 234555441 12222
Q ss_pred EEEeecCCcceEEEEECCCCCEEEE-EcCCCeEEEEECC--CCCc----eeeeeeeecCCeeeEEEecCCcEEEEEeC-C
Q 016982 197 ILQLDLSFSWAFGVKWSPSGNTLAY-VGHNSMIYFVDDV--GPSP----LAQNVAFRDLPLRDVLFVSEKMVIGVGFD-C 268 (379)
Q Consensus 197 ~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~v~d~~--~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~ 268 (379)
.. +.......+.++|+|+++.|+. .+.++.|.+||+. ++.. ....+......+..++++++|++.++... +
T Consensus 142 ~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 142 KK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp EE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred EE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC
Confidence 22 2222334688999999987654 4567899999873 3321 11122223345788999999998886654 4
Q ss_pred CeEEEEec
Q 016982 269 NPMVFAAD 276 (379)
Q Consensus 269 ~~~i~~~~ 276 (379)
.+..|+.+
T Consensus 221 ~v~~~d~~ 228 (297)
T 3g4e_A 221 RVIRLDPV 228 (297)
T ss_dssp EEEEECTT
T ss_pred EEEEEcCC
Confidence 56666654
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=2e-12 Score=120.38 Aligned_cols=239 Identities=12% Similarity=0.028 Sum_probs=147.8
Q ss_pred cCcceeEEEeCCCCcEEEEEec-----CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC-------
Q 016982 9 FAQCITCHAWSPDHAMVAFCPN-----NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR------- 76 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 76 (379)
+...+..++|||||++||.+.. ...|+++|+.+++.... .+.. .....++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4457889999999999986532 35799999999853222 2221 113578999 999998888774
Q ss_pred ------eEEEEeccCCceeeeEEee--c-CCCceeEEEECCCCCEEEEEeC----CCeEEEEEeecCCceeEEEEEeecC
Q 016982 77 ------NSYVWNQEGSEWVPTLVIL--R-LNRAALCVQWSPKENKFAVGSG----AKTVCICYYEQENNWWVSKLIRKRH 143 (379)
Q Consensus 77 ------~i~vw~~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~----d~~v~i~~~~~~~~~~~~~~~~~~~ 143 (379)
.|++|++.++......... . +......+.|+|||++|+.... +..|+++|+..+.. ....+ ..+
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~~~~l-~~~ 279 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--PLLTV-QGD 279 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--CCEEE-ECS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--ceEEE-eCC
Confidence 3999999876532222212 2 2345678999999998866543 34788888876531 12333 345
Q ss_pred CcCEEEEEEcCCCcEEEEee-CC---CeEEEEeccccccccccccCCCccCCcccc--eEEEeecCCcceEEEEECCCCC
Q 016982 144 DSSVTSVAWHPNNVFLATTS-TD---GKCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQLDLSFSWAFGVKWSPSGN 217 (379)
Q Consensus 144 ~~~v~~~~~~p~~~~l~~~~-~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~ 217 (379)
....... |++++..|+..+ .+ +.|..+|+. .+. ....+..+...+. .|+++++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~------------------~~~~~~~~~l~~~~~~~~--~~s~~g~ 338 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA------------------NPGPAHWRDLIPERQQVL--TVHSGSG 338 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETT------------------SCCGGGCEEEECCCSSCE--EEEEETT
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC------------------CCCccccEEEecCCCCEE--EEEEECC
Confidence 5555554 566665555443 33 578888862 221 1234444554454 8899999
Q ss_pred EEEEEcCC-C--eEEEEECCCCCceeeeeee-ecCCeeeEEEecCCcEEE-EEeC----CCeEEEEecC
Q 016982 218 TLAYVGHN-S--MIYFVDDVGPSPLAQNVAF-RDLPLRDVLFVSEKMVIG-VGFD----CNPMVFAADE 277 (379)
Q Consensus 218 ~l~~~~~d-~--~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~-~~~d----~~~~i~~~~~ 277 (379)
.|+....+ + .|++||+.+.. ...+.. ....+..+.+++++..++ ...+ ..+..|+...
T Consensus 339 ~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 339 YLFAEYMVDATARVEQFDYEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEEEEEETTEEEEEEECTTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred EEEEEEEECCeeEEEEEECCCCe--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 88776543 3 68899987543 233332 234566778888877555 3332 4555555443
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=3.1e-11 Score=100.76 Aligned_cols=200 Identities=10% Similarity=0.035 Sum_probs=124.9
Q ss_pred EeccCCCceEEEEEcCCCC-EEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEe
Q 016982 49 VLQKHDQIVSGIDWSVRSN-RIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYY 127 (379)
Q Consensus 49 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~ 127 (379)
.+.........+.|+|+++ ++++...++.|..|+.. ++. ..+ ......+..++++++|+++++...++.|..|+.
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~--~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVL--LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEE--EESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEE--eCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3344455678899999998 55666678899999984 442 222 334567899999999997666656678988876
Q ss_pred ecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE----eeC-------------CCeEEEEeccccccccccccCCCccC
Q 016982 128 EQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT----TST-------------DGKCRVFSTFIKGVDIKEKKEGTSSD 190 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~ 190 (379)
+ +....+...........+.+++++|+|+++++ |.. .+.|..+|.
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~----------------- 176 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP----------------- 176 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS-----------------
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC-----------------
Confidence 5 33111111110011234678999999998886 332 244666653
Q ss_pred CcccceEEEeecCCcceEEEEECCCCCEEEEEcCC------CeEEEEECCCCCcee--eee-eeecCCeeeEEEecCCcE
Q 016982 191 TKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN------SMIYFVDDVGPSPLA--QNV-AFRDLPLRDVLFVSEKMV 261 (379)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------~~i~v~d~~~~~~~~--~~~-~~~~~~i~~~~~s~~~~~ 261 (379)
.+++... +. .......++|+|+++.|+.+... +.|.+|++.... +. ..+ .........++++++|++
T Consensus 177 -~~g~~~~-~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 177 -DGSPLQR-MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp -SSCCCEE-EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred -CCCcEEE-Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCE
Confidence 2232222 11 23346789999999988777654 789999986543 11 111 112334567899999997
Q ss_pred EEEEeCCCeEEEEe
Q 016982 262 IGVGFDCNPMVFAA 275 (379)
Q Consensus 262 l~~~~d~~~~i~~~ 275 (379)
.++. .+.+.+|+.
T Consensus 253 wv~~-~~gv~~~~~ 265 (305)
T 3dr2_A 253 WSSS-GTGVCVFDS 265 (305)
T ss_dssp EECC-SSEEEEECT
T ss_pred EEec-CCcEEEECC
Confidence 7765 345666664
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=2.6e-11 Score=102.45 Aligned_cols=238 Identities=7% Similarity=0.040 Sum_probs=148.9
Q ss_pred EEEeCCCCcEEEEEe----------cCCeEEEEEecCCceEEEEEeccC-------CCceEEEEEcCCCCEEEEEeC--C
Q 016982 15 CHAWSPDHAMVAFCP----------NNNEVHIYKLIQEKWEKLHVLQKH-------DQIVSGIDWSVRSNRIVTVSH--D 75 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d 75 (379)
.++++|||++++++. .++.|.+||..+. +.+..+.-. ......++|+|||++++++.. +
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 399999999887765 3578999999987 455544321 123457999999999888764 6
Q ss_pred CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeec-CCceeEEE-EEeecCCcCE-EEEEE
Q 016982 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQ-ENNWWVSK-LIRKRHDSSV-TSVAW 152 (379)
Q Consensus 76 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~-~~~~~~~~~v-~~~~~ 152 (379)
+.|.++|+.+++.+..+... +. ...+....+.+++.+.||.+.+.++.. ++.. ... .....-..++ ....|
T Consensus 160 ~~VsVID~~t~~vv~tI~v~---g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~-~~~~~~~~~~~~~~~~~~~~ 233 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVP---DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE-ITHTEVFHPEDEFLINHPAY 233 (386)
T ss_dssp CEEEEEETTTTEEEEEEECC---SE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCE-EEECCCCSCTTSCBCSCCEE
T ss_pred CeEEEEECCCCcEEEEEECC---Cc--ceeecCCCceeEEECCCCCEEEEECCCCCeEE-Eeecceecccccccccccee
Confidence 88999999999877776432 11 122322345666777788887777765 3310 000 0101111222 12356
Q ss_pred c-CCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee----------cCCcceEEEEECCCCCEEEE
Q 016982 153 H-PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD----------LSFSWAFGVKWSPSGNTLAY 221 (379)
Q Consensus 153 ~-p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~sp~~~~l~~ 221 (379)
. ++|+++. .+.+|.+.+.|+..... +.+..+. ........++++|+++.++.
T Consensus 234 ~~~dG~~~~-vs~~g~V~v~d~~~~~~----------------~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV 296 (386)
T 3sjl_D 234 SQKAGRLVW-PTYTGKIHQIDLSSGDA----------------KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL 296 (386)
T ss_dssp ETTTTEEEE-EBTTSEEEEEECTTSSC----------------EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred EcCCCcEEE-EeCCCEEEEEECCCCcc----------------eeecceeccccccccccccCCCcceeeECCCCCeEEE
Confidence 4 5775544 56689999999731110 1111111 00122345777999988877
Q ss_pred EcC----------CCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCc-EEEE-E-eCCCeEEEEecCCC
Q 016982 222 VGH----------NSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKM-VIGV-G-FDCNPMVFAADETG 279 (379)
Q Consensus 222 ~~~----------d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~-~-~d~~~~i~~~~~~~ 279 (379)
... .+.|.++|+.+.+. +..+.. ..++.++++++|++ +|.+ . .++.+.+++.....
T Consensus 297 ~~~~~~~~~hk~~~~~V~viD~~t~kv-~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 297 LVDQRDEWRHKTASRFVVVLDAKTGER-LAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EeccccccccCCCCCEEEEEECCCCeE-EEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 642 25799999999774 455553 34788999999997 5554 3 37789999877654
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=5.8e-11 Score=110.51 Aligned_cols=184 Identities=12% Similarity=0.089 Sum_probs=118.4
Q ss_pred CCCceEEEEEcCCCCEEEEEe-----CCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCe------
Q 016982 53 HDQIVSGIDWSVRSNRIVTVS-----HDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKT------ 121 (379)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~~~-----~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~------ 121 (379)
|...+..++|||||++|+.+. ....|++||+.+++..... .. ......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LK--DVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EE--EEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cC--CceeccEEEe-CCCEEEEEEecCccccccc
Confidence 455788999999999887543 2246999999999854431 11 1124678999 9999999887743
Q ss_pred -------EEEEEeecCCceeEEEEEe--ec-CCcCEEEEEEcCCCcEEEEeeC----CCeEEEEeccccccccccccCCC
Q 016982 122 -------VCICYYEQENNWWVSKLIR--KR-HDSSVTSVAWHPNNVFLATTST----DGKCRVFSTFIKGVDIKEKKEGT 187 (379)
Q Consensus 122 -------v~i~~~~~~~~~~~~~~~~--~~-~~~~v~~~~~~p~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~ 187 (379)
|++|++.+.... ...+. .. +...+..+.|+|||++|+.... ...+.++|+.
T Consensus 203 ~~~~~~~v~~~~lgt~~~~--~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~------------- 267 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQED--DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS------------- 267 (693)
T ss_dssp --CCCCEEEEEETTSCGGG--CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT-------------
T ss_pred ccCCCcEEEEEECCCCccc--ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC-------------
Confidence 888887765421 11221 22 3445788999999998865432 3588999862
Q ss_pred ccCCccc-ceEEEeecCCcceEEEEECCCCCEEEE-EcCC---CeEEEEECCCCCc-eeeeeeeecCCeeeEEEecCCcE
Q 016982 188 SSDTKFG-EQILQLDLSFSWAFGVKWSPSGNTLAY-VGHN---SMIYFVDDVGPSP-LAQNVAFRDLPLRDVLFVSEKMV 261 (379)
Q Consensus 188 ~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d---~~i~v~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~ 261 (379)
.+ .....+..+....... ++++|..|+. +..+ +.|..+|+.++.. ..+.+..+...+. .|+++++.
T Consensus 268 -----~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~ 339 (693)
T 3iuj_A 268 -----QENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGY 339 (693)
T ss_dssp -----STTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTE
T ss_pred -----CCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCE
Confidence 22 1344454444444444 6666665554 4333 6899999887643 1234455555544 89999887
Q ss_pred EE
Q 016982 262 IG 263 (379)
Q Consensus 262 l~ 263 (379)
|+
T Consensus 340 lv 341 (693)
T 3iuj_A 340 LF 341 (693)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.44 E-value=2.1e-10 Score=97.70 Aligned_cols=241 Identities=7% Similarity=-0.059 Sum_probs=147.8
Q ss_pred EeC--CCCcEEEE-EecCCeEEEEEecCC--ceEEEEEec------c-CCCceEEEEEcCCCCEEEEEeCC------CeE
Q 016982 17 AWS--PDHAMVAF-CPNNNEVHIYKLIQE--KWEKLHVLQ------K-HDQIVSGIDWSVRSNRIVTVSHD------RNS 78 (379)
Q Consensus 17 ~~s--~~~~~l~~-~~~dg~i~i~~~~~~--~~~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i 78 (379)
.++ +++++|++ +..++.|+++|+.+. +.+...+++ . ....-..+..+|+| .++++..+ +.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 446 77887765 455789999998743 345555552 1 11244677889999 66666555 689
Q ss_pred EEEeccCCceeeeEEeecCC-CceeEEEECCCCCEEEEEe-------------------CCCeEEEEEeecCCceeEEEE
Q 016982 79 YVWNQEGSEWVPTLVILRLN-RAALCVQWSPKENKFAVGS-------------------GAKTVCICYYEQENNWWVSKL 138 (379)
Q Consensus 79 ~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-------------------~d~~v~i~~~~~~~~~~~~~~ 138 (379)
.++|..+.+.+..+...... .-...+-|+|+++.+++.. ....|.+||+.+++ ....
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k---~~~t 243 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK---RIHS 243 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE---EEEE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc---EeeE
Confidence 99999999877766432222 2345688899999888874 36899999998765 4455
Q ss_pred Eeec-CCcCEEEEEE--cCCCcEEEEee------CCCeEEEEeccccccccccccCCCccCCcccceEEEee-------c
Q 016982 139 IRKR-HDSSVTSVAW--HPNNVFLATTS------TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-------L 202 (379)
Q Consensus 139 ~~~~-~~~~v~~~~~--~p~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 202 (379)
+..+ .......+.| +|+++++.+++ .+++|.+|............ .+..+.+....+. +
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v-----Idi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV-----IEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE-----EEECCEECCSSCCGGGGGGTE
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE-----EeCCCcccccccccccccccc
Confidence 5232 1123445555 99998877766 45678777642100000000 0000000000000 0
Q ss_pred CCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCC--ceeeeeeeec--------------CCeeeEEEecCCcEEEEE
Q 016982 203 SFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPS--PLAQNVAFRD--------------LPLRDVLFVSEKMVIGVG 265 (379)
Q Consensus 203 ~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~--~~~~~~~~~~--------------~~i~~~~~s~~~~~l~~~ 265 (379)
.......+.+||||++|.++. ..+.|.+||+.... .++..+...+ .....++++|||++|.++
T Consensus 319 ~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 319 VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVT 398 (462)
T ss_dssp ECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEE
T ss_pred CCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEE
Confidence 013467899999999988765 46899999986432 2333333221 135889999999988755
Q ss_pred e
Q 016982 266 F 266 (379)
Q Consensus 266 ~ 266 (379)
.
T Consensus 399 N 399 (462)
T 2ece_A 399 N 399 (462)
T ss_dssp C
T ss_pred c
Confidence 5
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=4.8e-11 Score=101.01 Aligned_cols=262 Identities=10% Similarity=-0.077 Sum_probs=159.4
Q ss_pred eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEeccCCceeeeEEeecC-----
Q 016982 33 EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS----------HDRNSYVWNQEGSEWVPTLVILRL----- 97 (379)
Q Consensus 33 ~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vw~~~~~~~~~~~~~~~~----- 97 (379)
.|.++|..+. +.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+..+...+.
T Consensus 47 ~vsvID~~t~--~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCG--VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTT--EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred eEEEEECCCC--eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccccc
Confidence 8889999887 677777655556 799999999888876 367899999999998777754211
Q ss_pred CCceeEEEECCCCCEEEEEeC--CCeEEE--EEeecCCceeEEEEEeecCCcCEEEEEEcCCC-cEEEEeeCCCeEEEEe
Q 016982 98 NRAALCVQWSPKENKFAVGSG--AKTVCI--CYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN-VFLATTSTDGKCRVFS 172 (379)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~--d~~v~i--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~d~~i~v~d 172 (379)
......+.++|||++++++.. +..+.+ +|..+ .+.+..+. . ..+.|++ +.+++.+.|+.+.+.|
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~v~~--~---~~~~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSAS--C---FHIHPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECSS--C---CCCEEEETTEEECCCCTTSCEEEE
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh------ceEEECCC--c---eEEccCCCeEEEEEcCCCCEEEEE
Confidence 134678999999999999875 456888 77766 12221111 1 1233444 4455566788887777
Q ss_pred ccccccccccccCCCccCCcccceEE----EeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc-eeeeeee--
Q 016982 173 TFIKGVDIKEKKEGTSSDTKFGEQIL----QLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP-LAQNVAF-- 245 (379)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~-- 245 (379)
+..... ..++... .+.....+. . ++++..++..+. +.+.+.|...... .+..+..
T Consensus 192 ~~~~~~-------------~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~ 253 (368)
T 1mda_H 192 LAAAPA-------------AAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNE 253 (368)
T ss_dssp CCSSCC-------------CCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSC
T ss_pred Cccccc-------------cCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecc
Confidence 621000 0011110 011112233 3 565666666666 9999999865431 1121110
Q ss_pred --------ecCCeeeEEEecCCcEEEEE-e-C--------CCeEEEEecCCCcEEEEEEecccccCCCCCccCCCccccc
Q 016982 246 --------RDLPLRDVLFVSEKMVIGVG-F-D--------CNPMVFAADETGIWTFIKFLDERKTSSSGPKYGSQFSEAF 307 (379)
Q Consensus 246 --------~~~~i~~~~~s~~~~~l~~~-~-d--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (379)
.......++++|+++.+..+ . . +.+.+++......... +
T Consensus 254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~---i-------------------- 310 (368)
T 1mda_H 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP---I-------------------- 310 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC---C--------------------
T ss_pred ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE---E--------------------
Confidence 11122237899998766633 2 2 2455666554331111 0
Q ss_pred ceeeccccccCcccccccccccccccccceeeeeeecccCCcccceEEEee-cCceEEEEeCCCccccccCC
Q 016982 308 GKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITRFTTSG-LDGKIVTWDLESQEDLLNYH 378 (379)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~t~~-~Dg~v~iW~~~~~~~~~~~~ 378 (379)
..+. ...+++ +++++ .+++++.. .++.|.++|+.+++.++.+.
T Consensus 311 ----------------------~vg~--~p~gi~-~s~Dg---~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 311 ----------------------SNGH--DSDAII-AAQDG---ASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp ----------------------EEEE--EECEEE-ECCSS---SCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred ----------------------ECCC--CcceEE-ECCCC---CEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 0121 467788 77766 13677777 69999999999999887764
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=4e-11 Score=103.21 Aligned_cols=248 Identities=7% Similarity=0.021 Sum_probs=150.3
Q ss_pred EEEeCCCCcEEEEEe----------cCCeEEEEEecCCceEEEEEeccC-------CCceEEEEEcCCCCEEEEEeC--C
Q 016982 15 CHAWSPDHAMVAFCP----------NNNEVHIYKLIQEKWEKLHVLQKH-------DQIVSGIDWSVRSNRIVTVSH--D 75 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d 75 (379)
.++++|||++|+++. .++.|.++|..+. +.+..+.-. ......++|+|||++++++.. +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~--~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF--LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCC
Confidence 899999999888775 3678999999887 444444311 123457899999999988764 5
Q ss_pred CeEEEEeccCCceeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCeEEEEEeecCCceeEE-EEEeecCCcC-EEEEEE
Q 016982 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKE-NKFAVGSGAKTVCICYYEQENNWWVS-KLIRKRHDSS-VTSVAW 152 (379)
Q Consensus 76 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~~~~~-v~~~~~ 152 (379)
+.|.+.|+.+++.+..+... +. ....|++ ..+++.+.||.+.+.+...++..... ..+ .....+ ...+.+
T Consensus 200 ~~VsVID~~t~kvv~~I~v~---g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~-~v~~~p~~~~~~~ 272 (426)
T 3c75_H 200 PAVGVVDLEGKTFDRMLDVP---DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVF-HTEDELLINHPAF 272 (426)
T ss_dssp CEEEEEETTTTEEEEEEECC---SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCC-SCTTSCBCSCCEE
T ss_pred CeEEEEECCCCeEEEEEEcC---Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeee-ccCCCceeeEeee
Confidence 78999999999877766431 11 2233332 44555566777766666333311000 011 111111 123567
Q ss_pred cCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcC--------
Q 016982 153 HPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGH-------- 224 (379)
Q Consensus 153 ~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-------- 224 (379)
.+++..++..+..+.+.+.|............... ......... .......++++|+++++++...
T Consensus 273 ~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~---~~~~i~~g~---~p~g~~~va~s~dg~rlyVa~~~~~~gthk 346 (426)
T 3c75_H 273 SLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL---TEAERADDW---RPGGWQQTAYHRQSDRIYLLVDQRDEWKHK 346 (426)
T ss_dssp CTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS---CTTTGGGTE---EECSSSCEEEEGGGTEEEEEEEECCTTCTT
T ss_pred cCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec---ccccccccc---ccCCceeeEEcCCCCEEEEEeccccccccc
Confidence 88888777777889999998631111000000000 000000000 0111223689999887776532
Q ss_pred --CCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCc-EEEEEe--CCCeEEEEecCCC
Q 016982 225 --NSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKM-VIGVGF--DCNPMVFAADETG 279 (379)
Q Consensus 225 --d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~--d~~~~i~~~~~~~ 279 (379)
.+.|.++|..+.+. +..+.. .....++.|+|||+ ++++.. ++.+.+++.....
T Consensus 347 ~~s~~VsVID~~T~kv-v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 347 AASRFVVVLNAETGER-INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp SCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCeE-EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 35799999998774 466653 23578999999998 666443 7899999977654
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=1.1e-09 Score=92.15 Aligned_cols=188 Identities=6% Similarity=-0.020 Sum_probs=124.5
Q ss_pred cCcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEecc--CCCceEEEEEcCCCCEEEEEeC------CCeEEE
Q 016982 9 FAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK--HDQIVSGIDWSVRSNRIVTVSH------DRNSYV 80 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~------d~~i~v 80 (379)
+...+.+++|+|+|+++++. . ..|.+||..+++...+..... ....+..++++|+|+++++... .+.|..
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 45679999999999877754 4 459999988775444332221 1246889999999987665432 244555
Q ss_pred EeccCCceeeeEEeecCCCceeEEEECCCCCEEEEE-eCCCeEEEEEee--cC-CceeEEEEEe--ecCCcCEEEEEEcC
Q 016982 81 WNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVG-SGAKTVCICYYE--QE-NNWWVSKLIR--KRHDSSVTSVAWHP 154 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~~~~--~~-~~~~~~~~~~--~~~~~~v~~~~~~p 154 (379)
++ +++.... .........++|+|+++.++.+ +.++.|.+|+++ ++ ... ..+.+. .........+++++
T Consensus 166 ~~--~g~~~~~---~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~-~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 166 VA--KGKVTKL---FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG-KAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp EE--TTEEEEE---EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS-CCEEEEECTTSSSEEEEEEECT
T ss_pred Ee--CCcEEEe---eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc-CceEEEECCCCCCCCCeeEECC
Confidence 55 4543222 1223456789999999877655 446889999986 33 210 011121 22345567899999
Q ss_pred CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEEC-CCCCEEEEEc
Q 016982 155 NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWS-PSGNTLAYVG 223 (379)
Q Consensus 155 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~~~ 223 (379)
+|++.++...++.|.+||. .++.+..+..+...+.+++|+ |+++.|++++
T Consensus 240 ~G~lwva~~~~~~v~~~d~-------------------~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 240 EGHIWNARWGEGAVDRYDT-------------------DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TSCEEEEEETTTEEEEECT-------------------TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCEEEEEeCCCEEEEECC-------------------CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 9988777766788999984 355566666666679999998 8887765544
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.33 E-value=4.1e-10 Score=104.22 Aligned_cols=195 Identities=12% Similarity=0.097 Sum_probs=117.1
Q ss_pred CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCc----------e-EEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 22 HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQI----------V-SGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 22 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
+..+++++.++.|+-+|..++ +.+..+...... + ..+.+ .+..+++++.|+.|..+|..+++.+-
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDG--RLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTC--CEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCC--ceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEee
Confidence 456777778889999999988 455554432210 0 11222 35688888999999999999998665
Q ss_pred eEEeecCCCceeEEEECC---CCCEEEEEe------CCCeEEEEEeecCCceeEEEEEee--------------------
Q 016982 91 TLVILRLNRAALCVQWSP---KENKFAVGS------GAKTVCICYYEQENNWWVSKLIRK-------------------- 141 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~---~~~~l~~~~------~d~~v~i~~~~~~~~~~~~~~~~~-------------------- 141 (379)
......+......+..+| ++ .+++++ .++.|+.||..+++..+.......
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 554320111111222222 34 444443 268899999988874332221100
Q ss_pred -------cCCcCEEEEEEcCCCcEEEEeeCCCe-------------------EEEEeccccccccccccCCCccCCcccc
Q 016982 142 -------RHDSSVTSVAWHPNNVFLATTSTDGK-------------------CRVFSTFIKGVDIKEKKEGTSSDTKFGE 195 (379)
Q Consensus 142 -------~~~~~v~~~~~~p~~~~l~~~~~d~~-------------------i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (379)
........++++|+..+++.++.++. |..+|. .+++
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~------------------~TG~ 286 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNA------------------DTGE 286 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEET------------------TTCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEc------------------cCCc
Confidence 00011125788888888888887764 788886 5676
Q ss_pred eEEEeec--CC-------cceEEEEECCCCC---EEEEEcCCCeEEEEECCCCCce
Q 016982 196 QILQLDL--SF-------SWAFGVKWSPSGN---TLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 196 ~~~~~~~--~~-------~~v~~~~~sp~~~---~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
.+-.++. |. ..+.-.....+|+ .++.++.+|.++++|..+++.+
T Consensus 287 ~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 287 YVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 6655543 21 1111122222554 7888899999999999888743
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.27 E-value=2.7e-09 Score=98.60 Aligned_cols=194 Identities=8% Similarity=0.047 Sum_probs=116.6
Q ss_pred CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCc-----------eEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 22 HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQI-----------VSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 22 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
+..|++++.++.|+-+|..++ +.+..+...... ...+++ ++..|+.++.|+.|..+|..+++.+-
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTG--NRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTT--EEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCC--cEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEe
Confidence 345666777889999999988 555555432210 112333 35688888999999999999998665
Q ss_pred eEEee-cCC--CceeE-EEECCCCCEEEEEeC------CCeEEEEEeecCCceeEEEEEeec------------------
Q 016982 91 TLVIL-RLN--RAALC-VQWSPKENKFAVGSG------AKTVCICYYEQENNWWVSKLIRKR------------------ 142 (379)
Q Consensus 91 ~~~~~-~~~--~~v~~-~~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~~~------------------ 142 (379)
.+... ... ..+.. ... .+..+++++. ++.|+.+|..+++..+........
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 55432 100 11111 111 2345555553 689999999888743222211000
Q ss_pred ----------CCcCEEEEEEcCCCcEEEEeeCCC-------------------eEEEEeccccccccccccCCCccCCcc
Q 016982 143 ----------HDSSVTSVAWHPNNVFLATTSTDG-------------------KCRVFSTFIKGVDIKEKKEGTSSDTKF 193 (379)
Q Consensus 143 ----------~~~~v~~~~~~p~~~~l~~~~~d~-------------------~i~v~d~~~~~~~~~~~~~~~~~~~~~ 193 (379)
.......++++|++..++.++.++ .|..+|. .+
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~------------------~T 292 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDP------------------DT 292 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT------------------TT
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEEC------------------CC
Confidence 001113578888888888877664 3777775 56
Q ss_pred cceEEEeec--CC-------cceEEEEECCCC---CEEEEEcCCCeEEEEECCCCCce
Q 016982 194 GEQILQLDL--SF-------SWAFGVKWSPSG---NTLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 194 ~~~~~~~~~--~~-------~~v~~~~~sp~~---~~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
++.+-.++. |. ....-+....+| ..|+.++.+|.++++|..+++.+
T Consensus 293 G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 293 GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 666655443 21 112222333467 67888999999999999888753
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.26 E-value=5.9e-09 Score=88.90 Aligned_cols=193 Identities=15% Similarity=0.156 Sum_probs=128.6
Q ss_pred ceeEEEeCCCCcEEEEEecC------CeEEEEEecCCceEEEEEeccCCC---ceEEEEEcCCCCEEEEEe---------
Q 016982 12 CITCHAWSPDHAMVAFCPNN------NEVHIYKLIQEKWEKLHVLQKHDQ---IVSGIDWSVRSNRIVTVS--------- 73 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~--------- 73 (379)
....+..+|+| +++++..+ |.|.++|..+. +.+..+..... --..+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~--~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF--EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC--CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC--eEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 34556788999 66665444 78999999886 56666653222 234588899999888874
Q ss_pred ----------CCCeEEEEeccCCceeeeEEeecCCCceeEEEE--CCCCCEEEEEeC------CCeEEEEEeecCCceeE
Q 016982 74 ----------HDRNSYVWNQEGSEWVPTLVILRLNRAALCVQW--SPKENKFAVGSG------AKTVCICYYEQENNWWV 135 (379)
Q Consensus 74 ----------~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~ 135 (379)
.+.+|.+||+.+++....+...........+.| +|+++++++++. +++|.+|..+.+ .+..
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~ 294 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG-KWNA 294 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT-EEEE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC-ceeE
Confidence 367899999999877666654222234556656 999998888774 568888877653 2333
Q ss_pred EEEEeecC-----------------CcCEEEEEEcCCCcEEEEeeC-CCeEEEEeccccccccccccCCCccCCcccceE
Q 016982 136 SKLIRKRH-----------------DSSVTSVAWHPNNVFLATTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI 197 (379)
Q Consensus 136 ~~~~~~~~-----------------~~~v~~~~~~p~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
.+.+.... ......+.++||+++|.++.. .+.|.+||+.. ....+.+
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d---------------~~~~~lv 359 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN---------------PFKPVLT 359 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS---------------TTSCEEE
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC---------------CCCcEEE
Confidence 33221000 234678999999998887775 68999999720 0112333
Q ss_pred EEeecC--------------CcceEEEEECCCCCEEEEEc
Q 016982 198 LQLDLS--------------FSWAFGVKWSPSGNTLAYVG 223 (379)
Q Consensus 198 ~~~~~~--------------~~~v~~~~~sp~~~~l~~~~ 223 (379)
..+... .+....++++|||++|+++.
T Consensus 360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 333221 01357899999999999886
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.25 E-value=6.5e-08 Score=83.15 Aligned_cols=221 Identities=11% Similarity=0.046 Sum_probs=128.6
Q ss_pred CCcEEEEEecCCeEEEEEecCCceEEEEEeccC---------CCceE-EEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 21 DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKH---------DQIVS-GIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 21 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~---------~~~v~-~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
.+..+++++.++.|..+|..+++ .+...... ...+. .+.. ++..++.++.++.|..+|..+++..-
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGK--EIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAW 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCC--EEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCc--eeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEE
Confidence 35667778888999999998874 33333221 12222 2222 35678888889999999999998654
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCE------EEEEEcCCCcEEEEeeC
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSV------TSVAWHPNNVFLATTST 164 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v------~~~~~~p~~~~l~~~~~ 164 (379)
..... .......... +..+++++.++.+..+|..+++..+... . ...+ ...... +..++.++.
T Consensus 128 ~~~~~--~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~----~-~~~~~~~~~~~~~~~~--~~~v~~g~~ 196 (376)
T 3q7m_A 128 QTKVA--GEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVN----L-DMPSLSLRGESAPTTA--FGAAVVGGD 196 (376)
T ss_dssp EEECS--SCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEE----C-CC-----CCCCCCEEE--TTEEEECCT
T ss_pred EEeCC--CceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEe----C-CCCceeecCCCCcEEE--CCEEEEEcC
Confidence 44322 1111112222 4578888889999999988776322111 1 1111 111221 346777888
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCc-------ceEEEEECC--CCCEEEEEcCCCeEEEEECCC
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS-------WAFGVKWSP--SGNTLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~~~~sp--~~~~l~~~~~d~~i~v~d~~~ 235 (379)
++.+..+|. .+++.+-....... .+..+.-.| .+..++.++.++.+..+|..+
T Consensus 197 ~g~l~~~d~------------------~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t 258 (376)
T 3q7m_A 197 NGRVSAVLM------------------EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS 258 (376)
T ss_dssp TTEEEEEET------------------TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT
T ss_pred CCEEEEEEC------------------CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC
Confidence 999999996 44555444332110 000011122 256677788899999999988
Q ss_pred CCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCC
Q 016982 236 PSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET 278 (379)
Q Consensus 236 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~ 278 (379)
++.. .... ......+.. .++.+++++.++.+..++....
T Consensus 259 G~~~-w~~~--~~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 259 GQIM-WKRE--LGSVNDFIV-DGNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp CCEE-EEEC--CCCEEEEEE-ETTEEEEEETTCCEEEEETTTC
T ss_pred CcEE-eecc--CCCCCCceE-ECCEEEEEcCCCeEEEEECCCC
Confidence 7643 3222 122333333 2556666777888888886544
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.24 E-value=1.9e-10 Score=97.01 Aligned_cols=225 Identities=9% Similarity=0.019 Sum_probs=137.7
Q ss_pred EEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEee
Q 016982 16 HAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVIL 95 (379)
Q Consensus 16 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 95 (379)
+....++ .|.+++.++.|..|| .++ +...........+.++...+++. |..++.+ |..+|. +++.......
T Consensus 25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g--~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~- 95 (330)
T 3hxj_A 25 PILAKNG-TIYLGSSNKNLYAIN-TDG--SVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDT- 95 (330)
T ss_dssp CEECTTS-CEECSSTTTTTEEEC-TTS--CEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-
T ss_pred ceEccCC-eEEEEcCCCEEEEEC-CCC--cEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEEC-
Confidence 3444455 466677788899999 666 34444444444567777777774 4444444 888886 4442222211
Q ss_pred cCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccc
Q 016982 96 RLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFI 175 (379)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~ 175 (379)
.........+. +..+.+++.++.+..+|.. +.. .-.. ......+.++...+++. +..++.++.+..+|.
T Consensus 96 -~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~---~~~~-~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~-- 164 (330)
T 3hxj_A 96 -KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTE---KWRF-KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINP-- 164 (330)
T ss_dssp ------CCEEEE--TTEEEEECTTSEEEEECTT-SCE---EEEE-ECSSCCCSCCEECTTSC-EEEECTTSEEEEECT--
T ss_pred -CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCE---EEEE-cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECC--
Confidence 11112222333 5567788888989988876 442 2222 23334455666766776 555777889999985
Q ss_pred cccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEE
Q 016982 176 KGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLF 255 (379)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~ 255 (379)
. ++.+..+......+.++...+++.+++ ++ +.|..+| .++... .........+.++..
T Consensus 165 ----------------~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~-~~~~~~~~~~~~~~~ 222 (330)
T 3hxj_A 165 ----------------D-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEK-WNFYAGYWTVTRPAI 222 (330)
T ss_dssp ----------------T-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEE-EEECCSSCCCSCCEE
T ss_pred ----------------C-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEE-EEEccCCcceeceEE
Confidence 3 555555554455567778888887554 44 7899999 555433 344434466888999
Q ss_pred ecCCcEEEEEeCCCeEEEEecCCCcEE
Q 016982 256 VSEKMVIGVGFDCNPMVFAADETGIWT 282 (379)
Q Consensus 256 s~~~~~l~~~~d~~~~i~~~~~~~~~~ 282 (379)
.++|.+.+++.++.+..++.+....|.
T Consensus 223 ~~~g~l~v~t~~~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 223 SEDGTIYVTSLDGHLYAINPDGTEKWR 249 (330)
T ss_dssp CTTSCEEEEETTTEEEEECTTSCEEEE
T ss_pred CCCCeEEEEcCCCeEEEECCCCCEeEE
Confidence 999998888888888888543333444
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.24 E-value=5.6e-10 Score=94.53 Aligned_cols=215 Identities=7% Similarity=-0.061 Sum_probs=128.9
Q ss_pred EEEeCCCCcEEEEEe----------cCCeEEEEEecCCceEEEEEeccC-------CCceEEEEEcCCCCEEEEEeC--C
Q 016982 15 CHAWSPDHAMVAFCP----------NNNEVHIYKLIQEKWEKLHVLQKH-------DQIVSGIDWSVRSNRIVTVSH--D 75 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d 75 (379)
.+.++||+++++++. .++.|.+||+.+. +.+.++... ......++++|||++++++.. +
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 799999999988875 3678999999997 556665432 123468999999999988864 4
Q ss_pred CeEEE--EeccCCceeeeEEeecC-----CCceeEEEE-------------------------------------CCCCC
Q 016982 76 RNSYV--WNQEGSEWVPTLVILRL-----NRAALCVQW-------------------------------------SPKEN 111 (379)
Q Consensus 76 ~~i~v--w~~~~~~~~~~~~~~~~-----~~~v~~~~~-------------------------------------~~~~~ 111 (379)
..+.+ +|..+ ...+...+. .+.-.-+.+ .+++.
T Consensus 147 ~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~ 223 (368)
T 1mda_H 147 AAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPG 223 (368)
T ss_dssp CEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTT
T ss_pred CeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCC
Confidence 56888 88865 122211000 000000111 22233
Q ss_pred EEEEEeCCCeEEEEEeecCCceeEEEEEee------cC---CcCEEEEEEcCCCcEEEEeeC---------CCeEEEEec
Q 016982 112 KFAVGSGAKTVCICYYEQENNWWVSKLIRK------RH---DSSVTSVAWHPNNVFLATTST---------DGKCRVFST 173 (379)
Q Consensus 112 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~------~~---~~~v~~~~~~p~~~~l~~~~~---------d~~i~v~d~ 173 (379)
.++..+. +.+.+.|....... ....+.. .+ ......++++|+++++.++.. ++.+.++|+
T Consensus 224 ~~~~vs~-~~V~viD~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~ 301 (368)
T 1mda_H 224 MLVWAVA-SSILQGDIPAAGAT-MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301 (368)
T ss_dssp EEEECBS-SCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred EEEEEcC-CEEEEEECCCCcce-EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEEC
Confidence 3333333 55666565432210 1111100 00 011112679999987776533 235669997
Q ss_pred cccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCE-EEEEc-CCCeEEEEECCCCCceeeeeeeecCCee
Q 016982 174 FIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNT-LAYVG-HNSMIYFVDDVGPSPLAQNVAFRDLPLR 251 (379)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~i~ 251 (379)
.+.+.+..+.... ....++|+|||++ +++.. .++.|.++|+.+.+ .+..+... ....
T Consensus 302 ------------------~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k-vv~~I~vg-~~P~ 360 (368)
T 1mda_H 302 ------------------SVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ-DQSSVELD-KGPE 360 (368)
T ss_dssp ------------------SSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE-EEEECCCC-SCCC
T ss_pred ------------------CCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc-EEEEEECC-CCCC
Confidence 6677777776533 5789999999984 55555 58999999999876 44666543 3345
Q ss_pred eEEEec
Q 016982 252 DVLFVS 257 (379)
Q Consensus 252 ~~~~s~ 257 (379)
.+++.+
T Consensus 361 ~i~~~~ 366 (368)
T 1mda_H 361 SLSVQN 366 (368)
T ss_dssp EEECCC
T ss_pred EEEeec
Confidence 666544
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.24 E-value=4.6e-12 Score=108.55 Aligned_cols=204 Identities=10% Similarity=0.036 Sum_probs=107.6
Q ss_pred CCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCc
Q 016982 21 DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRA 100 (379)
Q Consensus 21 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~ 100 (379)
++..+++++.||.|+.||..++ +.+..+.. ..+.+..+..++..+++++.|+.|+.||..+++........ ....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG--~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~-~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG--SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT-IPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC--CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC-HHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCC--CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc-Cccc
Confidence 5778999999999999999988 45555554 44555555667777888789999999999888643332111 0111
Q ss_pred ee-EEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccc
Q 016982 101 AL-CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179 (379)
Q Consensus 101 v~-~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~ 179 (379)
+. ...+. .+..+++++.++.++.||..+++. .-.+ ..+. ...++|++..+++++.++.|+.||.
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~---~w~~-~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~------ 147 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEK---QQTL-SSAF----ADSLSPSTSLLYLGRTEYTITMYDT------ 147 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCS------
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcE---EEEe-cCCC----cccccccCCEEEEEecCCEEEEEEC------
Confidence 11 11111 345677888899999999988873 2222 1121 2345678888999999999999996
Q ss_pred cccccCCCccCCcccceEEEeecCCcceEEEEECCCC---CEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeee-EEE
Q 016982 180 IKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSG---NTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRD-VLF 255 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~-~~~ 255 (379)
.+++.+-.+.... ....+++++. ..+++++.+|.++.||..+++.+ .... ...++.. ..+
T Consensus 148 ------------~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~-W~~~-~~~pv~~~~~~ 211 (369)
T 2hz6_A 148 ------------KTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL-WIQN-YASPVVAFYVW 211 (369)
T ss_dssp ------------SSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE-EEEE-CSSCEEEEEEC
T ss_pred ------------CCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEE-EEec-CCCceEEEEEe
Confidence 4444433332111 1223344432 45677888999999999887643 4333 2344433 344
Q ss_pred ecCCc
Q 016982 256 VSEKM 260 (379)
Q Consensus 256 s~~~~ 260 (379)
+++|.
T Consensus 212 ~~dg~ 216 (369)
T 2hz6_A 212 QREGL 216 (369)
T ss_dssp TTSSC
T ss_pred cCCce
Confidence 45554
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3e-09 Score=90.21 Aligned_cols=198 Identities=6% Similarity=-0.009 Sum_probs=128.0
Q ss_pred cCcceeEEEeCCCCcEEEEEec-----CCeEEEEEecCCceEEEEEecc------CCCceEEEEEcCCCCEE-EEEe---
Q 016982 9 FAQCITCHAWSPDHAMVAFCPN-----NNEVHIYKLIQEKWEKLHVLQK------HDQIVSGIDWSVRSNRI-VTVS--- 73 (379)
Q Consensus 9 ~~~~i~~~~~s~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l-~~~~--- 73 (379)
+-..+.+++++++|+++++-.. ++.|.+||+.++ +.+..+.. +...+..++++|++..+ ++-.
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg--~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN--QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT--EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC--eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 4568999999999987776543 579999999887 33443332 22356889999875555 4444
Q ss_pred CCCeEEEEeccCCceeeeEEeecC-----------------------------CCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 74 HDRNSYVWNQEGSEWVPTLVILRL-----------------------------NRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 74 ~d~~i~vw~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
.++.|.+||+.+++....+ ..| ...+..++|+|+++.|+++..++. ++
T Consensus 143 ~~~~i~v~d~~~g~~~r~~--~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l 219 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVL--QGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SM 219 (343)
T ss_dssp GGCEEEEEETTTCCEEEEC--TTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EE
T ss_pred CCCeEEEEECCCCCEEEEe--cCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eE
Confidence 5788999999877643322 110 123578999999998888877653 44
Q ss_pred EEeecCC--c-----eeE---EEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCccc
Q 016982 125 CYYEQEN--N-----WWV---SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFG 194 (379)
Q Consensus 125 ~~~~~~~--~-----~~~---~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
|.+.... . ... ... .++......++++++|+++++...++.|.+||. ..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~--~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~------------------~~G 279 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIER--YSEKPICDGISIDKDHNIYVGDLAHSAIGVITS------------------ADR 279 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEE--EEECCSCSCEEECTTCCEEEEEGGGTEEEEEET------------------TTT
T ss_pred EEEEHHHhcCCCCChhhhhcceEe--cccCCCCceEEECCCCCEEEEccCCCeEEEEEC------------------CCC
Confidence 5444210 0 000 011 123335567899999999999888999999984 133
Q ss_pred ceEEEeec-CCcceEEEEECCCCCEEEEEcCCCeEEEE
Q 016982 195 EQILQLDL-SFSWAFGVKWSPSGNTLAYVGHNSMIYFV 231 (379)
Q Consensus 195 ~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~v~ 231 (379)
+....... ....+.+++|.+++.++++.+..+.+.+|
T Consensus 280 ~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 280 AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 32222221 23457899999999888887655544333
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.20 E-value=1.6e-09 Score=91.37 Aligned_cols=222 Identities=10% Similarity=0.022 Sum_probs=132.4
Q ss_pred ceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeee
Q 016982 12 CITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPT 91 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~ 91 (379)
.+.++...++|. |..++.+ |..+|.... ....+...........+. +..|..++.++.|..+|.. ++....
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~~g~---~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~ 131 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINPDGT---EKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWR 131 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECCCGG---GGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECCCCc---EEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEE
Confidence 345666666665 4444443 777775322 111111111122223333 4567778888999999988 654333
Q ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEE
Q 016982 92 LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVF 171 (379)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~ 171 (379)
. ......+.++...+++. +.+++.++.+..+|.. +. ..... ......+.++...+++.+++.. +.+..+
T Consensus 132 ~--~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~---~~~~~-~~~~~~~~~~~~d~~g~l~v~t---~~l~~~ 200 (330)
T 3hxj_A 132 F--KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT---EKWRF-KTNDAITSAASIGKDGTIYFGS---DKVYAI 200 (330)
T ss_dssp E--ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC---EEEEE-ECSSCCCSCCEECTTCCEEEES---SSEEEE
T ss_pred E--cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC---EeEEE-ecCCCceeeeEEcCCCEEEEEe---CEEEEE
Confidence 3 23344566777777776 6667778899998877 44 22222 2334456667777777755544 778888
Q ss_pred eccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCee
Q 016982 172 STFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLR 251 (379)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~ 251 (379)
| ..++.+..+......+.++...++|.+.+ ++.++.+..+|. ++.. ..........+.
T Consensus 201 d-------------------~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~-~~~~~~~~~~~~ 258 (330)
T 3hxj_A 201 N-------------------PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTE-KWRFKTGKRIES 258 (330)
T ss_dssp C-------------------TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCE-EEEEECSSCCCS
T ss_pred C-------------------CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCE-eEEeeCCCCccc
Confidence 7 23444444444445677888888886554 556788888874 3332 344443334455
Q ss_pred eEEEecCCcEEEEEeCCCeEEEEe
Q 016982 252 DVLFVSEKMVIGVGFDCNPMVFAA 275 (379)
Q Consensus 252 ~~~~s~~~~~l~~~~d~~~~i~~~ 275 (379)
.+...+++.+.+++.++.+..++.
T Consensus 259 ~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 259 SPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp CCEECTTSCEEEECTTCEEEEECT
T ss_pred cceEcCCCeEEEecCCCCEEEECC
Confidence 677777888888888878887764
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.20 E-value=3.2e-09 Score=93.70 Aligned_cols=250 Identities=8% Similarity=-0.033 Sum_probs=154.9
Q ss_pred CCCcEEEEEec-CCeEEEEEecCCceEEEE--EeccCCCceEEEEE-c-CCCCEEEEEe------------------CCC
Q 016982 20 PDHAMVAFCPN-NNEVHIYKLIQEKWEKLH--VLQKHDQIVSGIDW-S-VRSNRIVTVS------------------HDR 76 (379)
Q Consensus 20 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~--~~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d~ 76 (379)
+||+++.+... ++.|.+.|+.+. +... .+.. ......+++ + |+++++++++ .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~--~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVM--KCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT--EEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCc--eEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 37888776654 567999999987 4444 4432 235778887 5 9999998884 235
Q ss_pred eEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC------------------------------------
Q 016982 77 NSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK------------------------------------ 120 (379)
Q Consensus 77 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------------------ 120 (379)
.+.+.|..+.+....+... +....++++|+|+++++.+.+.
T Consensus 176 ~vtvID~~t~~v~~qI~Vg---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEETTTTEEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred eEEEEECCCCeEEEEEEeC---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 7999999998866666542 2457788999999999988543
Q ss_pred --eEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee-CCCeEEEEeccccccccccccCCCccCCcccceE
Q 016982 121 --TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQI 197 (379)
Q Consensus 121 --~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
.|.+.|..+.+.......+.. .....++.++|||+++++++ .+.+|.++|+.....-. .... ......+
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~-~~~l-----~~~~~v~ 324 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF-YENA-----DPRSAVV 324 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHH-HSCC-----CGGGGEE
T ss_pred ECcEEEEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccc-cccc-----CcccceE
Confidence 245555544110000122211 12446799999998777655 57899999984211000 0000 0112233
Q ss_pred EEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCC---------CceeeeeeeecCC-----eeeEEEecCCcEEE
Q 016982 198 LQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGP---------SPLAQNVAFRDLP-----LRDVLFVSEKMVIG 263 (379)
Q Consensus 198 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~---------~~~~~~~~~~~~~-----i~~~~~s~~~~~l~ 263 (379)
..... ......++|+|+|...++.-.|++|.+||+... .+.+..+..|-.+ -..+.++|||++|.
T Consensus 325 ~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 325 AEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp ECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred EEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 34433 345789999999944455668999999998661 2345555544322 23456789999998
Q ss_pred EEeCC---Ce-----------EEEEecCCCcEEEEE
Q 016982 264 VGFDC---NP-----------MVFAADETGIWTFIK 285 (379)
Q Consensus 264 ~~~d~---~~-----------~i~~~~~~~~~~~~~ 285 (379)
++... .+ .+++..+.. .+++.
T Consensus 404 ~~Nk~skdr~~~~gp~~~~~~ql~dis~~~-m~lv~ 438 (595)
T 1fwx_A 404 CLSKFSKDRFLNVGPLKPENDQLIDISGDK-MVLVH 438 (595)
T ss_dssp EEESCCTTSSCCCCSSCCEEEEEEECSSSS-CEEEE
T ss_pred EcCCCCccccccCCCCCCCcceEEEcCCCc-EEEEE
Confidence 65432 33 778885433 44443
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.16 E-value=1.8e-07 Score=76.25 Aligned_cols=221 Identities=9% Similarity=-0.003 Sum_probs=134.4
Q ss_pred cceeEEEeCCCCcEEEEE-ecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVAFC-PNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~ 88 (379)
..+.+++|+++++.|..+ ..++.|..++..+... ...+.........++++|++..|+.+. ..+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 356789999976555544 4578999999887532 222222224668999999766665554 567899999875432
Q ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeC---CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEE-EEeeC
Q 016982 89 VPTLVILRLNRAALCVQWSPKENKFAVGSG---AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFL-ATTST 164 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~~~ 164 (379)
..+. .........++++|++..|..+.. .+.|..++++... .+.+..........++++|++..| ++-..
T Consensus 114 -~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~----~~~~~~~~~~~P~gia~d~~~~~lyv~d~~ 187 (267)
T 1npe_A 114 -RVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN----RRILAQDNLGLPNGLTFDAFSSQLCWVDAG 187 (267)
T ss_dssp -EEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC----CEEEECTTCSCEEEEEEETTTTEEEEEETT
T ss_pred -EEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC----cEEEEECCCCCCcEEEEcCCCCEEEEEECC
Confidence 2221 122246789999997666655554 3678777765433 222212333467899999987555 44455
Q ss_pred CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee
Q 016982 165 DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA 244 (379)
Q Consensus 165 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 244 (379)
.+.|.++|+. .......+.. ......++.. ++.++++....+.|..+|..+++. +..+.
T Consensus 188 ~~~I~~~~~~------------------g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~-~~~i~ 246 (267)
T 1npe_A 188 THRAECLNPA------------------QPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKE-MDTFH 246 (267)
T ss_dssp TTEEEEEETT------------------EEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEE-EEEEC
T ss_pred CCEEEEEecC------------------CCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCc-eEEEc
Confidence 6889999862 1111111222 2234566654 344444444668999999887653 35554
Q ss_pred eec-CCeeeEEEecCCc
Q 016982 245 FRD-LPLRDVLFVSEKM 260 (379)
Q Consensus 245 ~~~-~~i~~~~~s~~~~ 260 (379)
... .....+++.|++.
T Consensus 247 ~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 247 PHKQTRLYGITIALSQC 263 (267)
T ss_dssp CSSCCCCCCEEEECSCC
T ss_pred cccccccceeeecCccC
Confidence 322 2467888888764
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.14 E-value=7.4e-08 Score=77.15 Aligned_cols=192 Identities=9% Similarity=-0.028 Sum_probs=122.9
Q ss_pred EEEEEeccCCC--ceEEEEEcCCCCEEEEEeC--CCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CC
Q 016982 45 EKLHVLQKHDQ--IVSGIDWSVRSNRIVTVSH--DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GA 119 (379)
Q Consensus 45 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d 119 (379)
+.+.++. |.. ....++|+|++.+.++.+. ++.|.+.|+.+++....+.+..+ .....+++. ++.|..+. .+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTC
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecC
Confidence 4555664 443 3579999998744444443 57899999999997776654222 222344554 55555554 47
Q ss_pred CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEE
Q 016982 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ 199 (379)
Q Consensus 120 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
+.+.++|..+.+ ....+..+ ... ...+++|++.++++..++.|.++|. .+.+.+..
T Consensus 86 ~~v~viD~~t~~---v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~------------------~t~~v~~~ 141 (266)
T 2iwa_A 86 NIGFIYDRRTLS---NIKNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDP------------------HTFKLIKK 141 (266)
T ss_dssp SEEEEEETTTTE---EEEEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECT------------------TTCCEEEE
T ss_pred CEEEEEECCCCc---EEEEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEEC------------------CCCcEEEE
Confidence 899999988776 44555233 111 2335567776666667889999996 55555655
Q ss_pred eecCC-----cceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeec-------------CCeeeEEEecCCcE
Q 016982 200 LDLSF-----SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD-------------LPLRDVLFVSEKMV 261 (379)
Q Consensus 200 ~~~~~-----~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-------------~~i~~~~~s~~~~~ 261 (379)
+.... ..++.+.|. +|...+....++.|.+.|..+++. +..+.... ...+.++|+|+++.
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V-~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL-LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE-EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE-EEEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 54221 136678888 776555555688999999998773 45554321 24589999999876
Q ss_pred EEEEe
Q 016982 262 IGVGF 266 (379)
Q Consensus 262 l~~~~ 266 (379)
+..+.
T Consensus 220 lfVTg 224 (266)
T 2iwa_A 220 IFVTG 224 (266)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 55433
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.13 E-value=7.6e-08 Score=77.06 Aligned_cols=194 Identities=8% Similarity=0.028 Sum_probs=130.0
Q ss_pred ceeEEEeCCCCcEEEEEec--CCeEEEEEecCCceEEEEEec--cCCCceEEEEEcCCCCEEEEE-eCCCeEEEEeccCC
Q 016982 12 CITCHAWSPDHAMVAFCPN--NNEVHIYKLIQEKWEKLHVLQ--KHDQIVSGIDWSVRSNRIVTV-SHDRNSYVWNQEGS 86 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~ 86 (379)
....++|+|++.++++.+. ++.|.++|+.+++ .+..+. .+. ....+++. ++.|..+ -.++.+.++|..+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 3679999998765555443 5799999999984 444433 322 22345554 5555444 46789999999999
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeec-CC---cCEEEEEEcCCCcEEEEe
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR-HD---SSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-~~---~~v~~~~~~p~~~~l~~~ 162 (379)
+.+..+... ... ...+++||+.++++..++.|.++|..+.+ ....+..+ .. ...+.+.|. ++..++..
T Consensus 97 ~v~~~i~~g--~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~---v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~ 168 (266)
T 2iwa_A 97 SNIKNFTHQ--MKD--GWGLATDGKILYGSDGTSILYEIDPHTFK---LIKKHNVKYNGHRVIRLNELEYI-NGEVWANI 168 (266)
T ss_dssp EEEEEEECC--SSS--CCEEEECSSSEEEECSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred cEEEEEECC--CCC--eEEEEECCCEEEEECCCCeEEEEECCCCc---EEEEEEECCCCcccccceeEEEE-CCEEEEec
Confidence 877776532 111 23455678878777778899998887766 34444222 11 236778888 77666666
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC-------------CcceEEEEECCCCCEEE-EEcCCCeE
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS-------------FSWAFGVKWSPSGNTLA-YVGHNSMI 228 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~l~-~~~~d~~i 228 (379)
..++.|.+.|. .+++.+..+... ......++|+|+++.|+ ++...+.+
T Consensus 169 ~~~~~V~vID~------------------~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 169 WQTDCIARISA------------------KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp TTSSEEEEEET------------------TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred CCCCeEEEEEC------------------CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeE
Confidence 66889999996 677777776532 12458999999987654 55577889
Q ss_pred EEEECCCC
Q 016982 229 YFVDDVGP 236 (379)
Q Consensus 229 ~v~d~~~~ 236 (379)
.+.++...
T Consensus 231 ~~i~l~~~ 238 (266)
T 2iwa_A 231 FEIKLHLV 238 (266)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecc
Confidence 88887553
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.10 E-value=2.1e-07 Score=78.14 Aligned_cols=240 Identities=7% Similarity=-0.000 Sum_probs=140.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEecc-----------------CCCceEEEEEcC-CCCEEEEE
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK-----------------HDQIVSGIDWSV-RSNRIVTV 72 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~-~~~~l~~~ 72 (379)
....+++|+++|+++.++..++.|..|+..++.......... ....+..+++.+ ++ .|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEE
Confidence 346788999999978888888999999987754333221110 012468899998 55 55555
Q ss_pred eCCCeEEEEeccCCceeeeEEeec--CCCceeEEEECC-CCCEEEEEeC-----------------CCeEEEEEeecCCc
Q 016982 73 SHDRNSYVWNQEGSEWVPTLVILR--LNRAALCVQWSP-KENKFAVGSG-----------------AKTVCICYYEQENN 132 (379)
Q Consensus 73 ~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~v~i~~~~~~~~ 132 (379)
...+.+..+|..++.......... .......+++.+ +|++.++-.. ++.|..+|..++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~- 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE- 176 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE-
Confidence 555668888877654221111000 113467899999 8986666432 2567776655443
Q ss_pred eeEEEEEeecCCcCEEEEEEcCCCcEEEEe-eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEE
Q 016982 133 WWVSKLIRKRHDSSVTSVAWHPNNVFLATT-STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVK 211 (379)
Q Consensus 133 ~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 211 (379)
..... . .......++++|+++.|..+ +..+.|.+|++.... ....+....+ .+ ...++
T Consensus 177 --~~~~~-~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~-------------~~~~~~~~~~---~g-P~gi~ 235 (322)
T 2fp8_A 177 --TTLLL-K-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK-------------KGTAEVLVKI---PN-PGNIK 235 (322)
T ss_dssp --EEEEE-E-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT-------------TTCEEEEEEC---SS-EEEEE
T ss_pred --EEEec-c-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc-------------CCccceEEeC---CC-CCCeE
Confidence 11111 1 11234579999999865554 556889999863100 0011111221 23 67899
Q ss_pred ECCCCCEEEEEcC----------CCeEEEEECCCCCceeeeeeeec----CCeeeEEEecCCcEEEEE-eCCCeEEEEec
Q 016982 212 WSPSGNTLAYVGH----------NSMIYFVDDVGPSPLAQNVAFRD----LPLRDVLFVSEKMVIGVG-FDCNPMVFAAD 276 (379)
Q Consensus 212 ~sp~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~-~d~~~~i~~~~ 276 (379)
++++|++.++... .+.|..+|.. ++ .+..+.... ..+..+++ .++++++++ ..+.+..+...
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~-~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GN-ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SC-EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCC-CC-EEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 9999987766544 4668888854 33 334444322 23566666 456666554 45566666543
No 238
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=99.08 E-value=1.3e-06 Score=73.28 Aligned_cols=243 Identities=11% Similarity=0.097 Sum_probs=135.2
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCC-ceEEEEEe-ccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCc
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVL-QKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSE 87 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~ 87 (379)
...+.+|.|.+++..+++| ..|.|.. ..+.+ .++.+..- ......+.++.|.+ +. ++.++.++.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 4578999998877777755 5676532 23322 34444321 12344788999986 43 444455665543 223332
Q ss_pred -eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCC
Q 016982 88 -WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG 166 (379)
Q Consensus 88 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 166 (379)
+............+..+.+.+++..++++ .++.|.. ..+.+..|... . ......+..+.+.|++.+++.+...+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~--~-~~~~~~~~~~~~~~~~~~~~~g~~G~ 184 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQAL--V-QEAIGVMRNLNRSPSGEYVAVSSRGS 184 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEE--E-CSCCCCEEEEEECTTSCEEEEETTSS
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEe--e-cCCCcceEEEEEcCCCcEEEEECCCc
Confidence 22221111123456778777777666655 4565422 22334444332 2 34556789999999988877665443
Q ss_pred eEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee--
Q 016982 167 KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA-- 244 (379)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-- 244 (379)
..+-.|-. ..+.+.+. ......+..+.+++++..++. +.+|.+++.+...+.. ...+.
T Consensus 185 ~~~S~d~g----------------G~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~t-W~~~~~~ 244 (327)
T 2xbg_A 185 FYSTWEPG----------------QTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSEN-WGELLSP 244 (327)
T ss_dssp EEEEECTT----------------CSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEE-ECCCBCT
T ss_pred EEEEeCCC----------------CCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCe-eEeccCC
Confidence 33333310 01222221 123456788999999886655 4578777764222221 11111
Q ss_pred --eecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCCcEEE
Q 016982 245 --FRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETGIWTF 283 (379)
Q Consensus 245 --~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~~~~~ 283 (379)
.....+.++.+.+++.+++++.++.+ ++..+....|..
T Consensus 245 ~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~ 284 (327)
T 2xbg_A 245 LRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQ 284 (327)
T ss_dssp TSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEE
T ss_pred cccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEE
Confidence 12235788999998898888887766 455666667764
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=5.3e-08 Score=90.02 Aligned_cols=219 Identities=5% Similarity=0.015 Sum_probs=136.0
Q ss_pred cEEEEEec------CCeEEEEEecCCceEEEEEeccCCC--------------------------------ceEEEEEcC
Q 016982 23 AMVAFCPN------NNEVHIYKLIQEKWEKLHVLQKHDQ--------------------------------IVSGIDWSV 64 (379)
Q Consensus 23 ~~l~~~~~------dg~i~i~~~~~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~ 64 (379)
..+++++. ++.|+.||..++ +.+..+..... ....++++|
T Consensus 175 ~~v~v~~~~~~~~~~g~v~a~D~~tG--~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~ 252 (677)
T 1kb0_A 175 GKVIIGNGGAEYGVRGYITAYDAETG--ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA 252 (677)
T ss_dssp TEEEECCBCTTTCCBCEEEEEETTTC--CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET
T ss_pred CEEEEEecccccCCCCEEEEEECCCC--cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC
Confidence 44555543 689999999988 44444332111 113578889
Q ss_pred CCCEEEEEeCCC-------------------eEEEEeccCCceeeeEEeecCC-------CceeEEEECCCC---CEEEE
Q 016982 65 RSNRIVTVSHDR-------------------NSYVWNQEGSEWVPTLVILRLN-------RAALCVQWSPKE---NKFAV 115 (379)
Q Consensus 65 ~~~~l~~~~~d~-------------------~i~vw~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~---~~l~~ 115 (379)
++..++.+..++ .|..+|..+++.+-.+....|. ....-+....+| ..++.
T Consensus 253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 888888877654 5999999999876666543332 112222333367 67889
Q ss_pred EeCCCeEEEEEeecCCceeEEEEEe-------ecCCcCE------------------------EEEEEcCCCcEEEEeeC
Q 016982 116 GSGAKTVCICYYEQENNWWVSKLIR-------KRHDSSV------------------------TSVAWHPNNVFLATTST 164 (379)
Q Consensus 116 ~~~d~~v~i~~~~~~~~~~~~~~~~-------~~~~~~v------------------------~~~~~~p~~~~l~~~~~ 164 (379)
++.+|.++++|..+++.....+... .....++ ..++++|+..++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 9999999999998887422111000 0000001 14678888877776543
Q ss_pred C-------------------------------------------CeEEEEeccccccccccccCCCccCCcccceEEEee
Q 016982 165 D-------------------------------------------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD 201 (379)
Q Consensus 165 d-------------------------------------------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (379)
+ +.|..||+ .+++.+-++.
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~------------------~tG~~~W~~~ 474 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDP------------------VAQKAAWSVE 474 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEET------------------TTTEEEEEEE
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeC------------------CCCcEEeecC
Confidence 2 55666765 5566555554
Q ss_pred cCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee-eecCCeeeEEEecCCcEEE
Q 016982 202 LSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA-FRDLPLRDVLFVSEKMVIG 263 (379)
Q Consensus 202 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~ 263 (379)
. ..++....+...+.+++.++.||.+++||..+++.+ ..+. .+.....-+.|..+|+.++
T Consensus 475 ~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l-w~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 475 H-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL-WEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp E-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE-EEEECSSCCCSCCEEEEETTEEEE
T ss_pred C-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee-eeeeCCCCcccCCEEEEeCCEEEE
Confidence 3 223444456667888888999999999999998854 4444 3333334567778887444
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.05 E-value=1e-07 Score=88.30 Aligned_cols=185 Identities=7% Similarity=-0.008 Sum_probs=114.8
Q ss_pred EEEEcCCCCEEEEEeCCCe-------------------EEEEeccCCceeeeEEeecCC-------CceeEEEECCCCC-
Q 016982 59 GIDWSVRSNRIVTVSHDRN-------------------SYVWNQEGSEWVPTLVILRLN-------RAALCVQWSPKEN- 111 (379)
Q Consensus 59 ~~~~~~~~~~l~~~~~d~~-------------------i~vw~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~- 111 (379)
.++++|++..++.+..++. |..+|..+++.+-.+....|. .++.......+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788898889988887763 999999999866655433232 1111122222554
Q ss_pred --EEEEEeCCCeEEEEEeecCCceeEEEEEe-------e-----------------cCCc-----------CEEEEEEcC
Q 016982 112 --KFAVGSGAKTVCICYYEQENNWWVSKLIR-------K-----------------RHDS-----------SVTSVAWHP 154 (379)
Q Consensus 112 --~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-------~-----------------~~~~-----------~v~~~~~~p 154 (379)
.++.++.+|.++++|..+++.....+... . .... .-..++++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 78889999999999988887421110000 0 0000 011267888
Q ss_pred CCcEEEEeeCC---------------------------------------------CeEEEEeccccccccccccCCCcc
Q 016982 155 NNVFLATTSTD---------------------------------------------GKCRVFSTFIKGVDIKEKKEGTSS 189 (379)
Q Consensus 155 ~~~~l~~~~~d---------------------------------------------~~i~v~d~~~~~~~~~~~~~~~~~ 189 (379)
+..++++...+ |.|..||+
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~---------------- 462 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP---------------- 462 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET----------------
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC----------------
Confidence 87777765433 44555654
Q ss_pred CCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeee-ecCCeeeEEEecCCcEEE
Q 016982 190 DTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF-RDLPLRDVLFVSEKMVIG 263 (379)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~ 263 (379)
.+++.+-++..+. +.....+...+.+++.++.|+.++.||.++++.+ ..+.. +.....-+.|..+|+..+
T Consensus 463 --~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l-w~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 463 --VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL-WEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp --TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE-EEEECSSCCCSCCEEEEETTEEEE
T ss_pred --CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccc-eeeeCCCCcccCceEEEECCEEEE
Confidence 5666665554432 2233355567888999999999999999998855 44443 222234577888887443
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=7.1e-08 Score=85.30 Aligned_cols=211 Identities=11% Similarity=0.008 Sum_probs=133.4
Q ss_pred cceeEEEe-C-CCCcEEEEEe------------------cCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEE
Q 016982 11 QCITCHAW-S-PDHAMVAFCP------------------NNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIV 70 (379)
Q Consensus 11 ~~i~~~~~-s-~~~~~l~~~~------------------~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 70 (379)
..+..+++ + |+++++++++ .++.+.+.|.++. +...++.--. ....++++|+|++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~--~v~~qI~Vgg-~pd~~~~spdGk~~~ 210 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKW--EVAWQVLVSG-NLDNCDADYEGKWAF 210 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTT--EEEEEEEESS-CCCCEEECSSSSEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCC--eEEEEEEeCC-CccceEECCCCCEEE
Confidence 45778887 5 9999998884 2457899999886 5555554322 346788999999998
Q ss_pred EEeCCC--------------------------------------eEEEEeccC--Cce-eeeEEeecCCCceeEEEECCC
Q 016982 71 TVSHDR--------------------------------------NSYVWNQEG--SEW-VPTLVILRLNRAALCVQWSPK 109 (379)
Q Consensus 71 ~~~~d~--------------------------------------~i~vw~~~~--~~~-~~~~~~~~~~~~v~~~~~~~~ 109 (379)
+.+.+. .|.+.|..+ ++. ...+. -.....++.++||
T Consensus 211 vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip---vg~~PhGv~~sPD 287 (595)
T 1fwx_A 211 STSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP---IANNPHGCNMAPD 287 (595)
T ss_dssp EEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE---EESSCCCEEECTT
T ss_pred EEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe---cCCCceEEEEcCC
Confidence 887543 255555555 321 12221 2345678999999
Q ss_pred CCEEEEEeC-CCeEEEEEeecCCc---------eeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccc
Q 016982 110 ENKFAVGSG-AKTVCICYYEQENN---------WWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVD 179 (379)
Q Consensus 110 ~~~l~~~~~-d~~v~i~~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~ 179 (379)
|+++++++. +..|.++|+.+... ..+...+ .-......++|+|+|...++.-.++.|.+||+......
T Consensus 288 Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v--~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~ 365 (595)
T 1fwx_A 288 KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP--ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRA 365 (595)
T ss_dssp SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHH
T ss_pred CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhh
Confidence 998877764 78999999986420 0012222 23345788999999955556667999999997310000
Q ss_pred cccccCCCccCCcccceEEEeecCCcce-----EEEEECCCCCEEEEEcC---CCe----------EEEEECCCCC
Q 016982 180 IKEKKEGTSSDTKFGEQILQLDLSFSWA-----FGVKWSPSGNTLAYVGH---NSM----------IYFVDDVGPS 237 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~sp~~~~l~~~~~---d~~----------i~v~d~~~~~ 237 (379)
+. . ....+.+..+..|-.+- ..+.++|||++|+++.. |+. -.++|+.+.+
T Consensus 366 ~~-g-------~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 366 YA-G-------EKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp HH-T-------CSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred hc-c-------cccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 00 0 01134566666554321 22356899999998753 332 2789985543
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=2.5e-07 Score=73.17 Aligned_cols=198 Identities=11% Similarity=0.063 Sum_probs=124.3
Q ss_pred EEEEEeccCCCc--eEEEEEcCCCCEEEEEeCCC--eEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CC
Q 016982 45 EKLHVLQKHDQI--VSGIDWSVRSNRIVTVSHDR--NSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GA 119 (379)
Q Consensus 45 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d 119 (379)
+.+.+++ |... ...+.|+ ++.+..+.+.+| .|+++|+.+++......+ ..........++++.|.... .+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSS
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEeeC
Confidence 4555664 4433 4778898 666666666665 899999999997777654 23333322333455555554 48
Q ss_pred CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEE
Q 016982 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ 199 (379)
Q Consensus 120 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
+.+.+||..+.+ ....+.....+ ..+ .++++.|+....++.|.++|. .+.+.+.+
T Consensus 107 ~~v~v~D~~t~~---~~~ti~~~~eG--~gl--t~dg~~L~~SdGs~~i~~iDp------------------~T~~v~~~ 161 (262)
T 3nol_A 107 GLGFVWNIRNLR---QVRSFNYDGEG--WGL--THNDQYLIMSDGTPVLRFLDP------------------ESLTPVRT 161 (262)
T ss_dssp SEEEEEETTTCC---EEEEEECSSCC--CCE--EECSSCEEECCSSSEEEEECT------------------TTCSEEEE
T ss_pred CEEEEEECccCc---EEEEEECCCCc--eEE--ecCCCEEEEECCCCeEEEEcC------------------CCCeEEEE
Confidence 899999998877 45555222221 233 357777777666788999996 55666666
Q ss_pred eecC--C---cceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeee------------cCCeeeEEEecCCcEE
Q 016982 200 LDLS--F---SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR------------DLPLRDVLFVSEKMVI 262 (379)
Q Consensus 200 ~~~~--~---~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l 262 (379)
+... . ..++.+.|. +|+..+..-.++.|.+.|..+++. +..+... ..-.+.++|+|+++.|
T Consensus 162 I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V-~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 162 ITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV-TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE-EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred EEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE-EEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 5432 1 234567776 676665555788999999988763 3444321 1346889999987665
Q ss_pred EEEeCCCeEEEE
Q 016982 263 GVGFDCNPMVFA 274 (379)
Q Consensus 263 ~~~~d~~~~i~~ 274 (379)
......=-++|.
T Consensus 240 fVTGK~Wp~~~e 251 (262)
T 3nol_A 240 FVTGKLWPKVFE 251 (262)
T ss_dssp EEEETTCSEEEE
T ss_pred EEECCCCCceEE
Confidence 544343344443
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.03 E-value=7.6e-07 Score=74.65 Aligned_cols=189 Identities=9% Similarity=-0.011 Sum_probs=111.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeec------------------CCCceeEEEECC-CCCEEEEE
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILR------------------LNRAALCVQWSP-KENKFAVG 116 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------------------~~~~v~~~~~~~-~~~~l~~~ 116 (379)
...+++|.++++++.++..++.|..|+..+++... +.... ....+..+++.+ +++ |+++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 34678999999878888888999999987765322 21100 013478899998 555 5555
Q ss_pred eCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC-CCcEEEEeeC-----------------CCeEEEEecccccc
Q 016982 117 SGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP-NNVFLATTST-----------------DGKCRVFSTFIKGV 178 (379)
Q Consensus 117 ~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~-----------------d~~i~v~d~~~~~~ 178 (379)
...+.+..+|...+....+..............+++.| +|++.++-.. ++.|..+|.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~----- 172 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP----- 172 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET-----
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC-----
Confidence 44455777665433211111111001123468899999 8887766432 356777764
Q ss_pred ccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCc-eeeeeeeecCCeeeEEEe
Q 016982 179 DIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP-LAQNVAFRDLPLRDVLFV 256 (379)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~~-~~~~~~~~~~~i~~~~~s 256 (379)
..++. ..+.........++++|+|++|+.+ ...+.|.+|++..... ....+..... ...+++.
T Consensus 173 -------------~~~~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d 237 (322)
T 2fp8_A 173 -------------STKET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRN 237 (322)
T ss_dssp -------------TTTEE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEEC
T ss_pred -------------CCCEE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEEC
Confidence 22222 1111111235679999999866655 5568999999875321 1112211223 6789999
Q ss_pred cCCcEEEEEe
Q 016982 257 SEKMVIGVGF 266 (379)
Q Consensus 257 ~~~~~l~~~~ 266 (379)
++|+++++..
T Consensus 238 ~~G~l~va~~ 247 (322)
T 2fp8_A 238 ADGHFWVSSS 247 (322)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEec
Confidence 9998777554
No 244
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=7.5e-07 Score=76.48 Aligned_cols=227 Identities=11% Similarity=0.054 Sum_probs=130.3
Q ss_pred CCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCC-
Q 016982 21 DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNR- 99 (379)
Q Consensus 21 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~- 99 (379)
++..+++++.++.|..+|..+++ .+................ +..++.++.++.|..+|..+++..-.........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~--~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGT--VAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCC--EEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--EEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCcee
Confidence 34567778889999999999874 433333322211122222 4577888889999999999997555443211100
Q ss_pred --ceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCc-----CEEEEEEcC--CCcEEEEeeCCCeEEE
Q 016982 100 --AALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDS-----SVTSVAWHP--NNVFLATTSTDGKCRV 170 (379)
Q Consensus 100 --~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~p--~~~~l~~~~~d~~i~v 170 (379)
........ +..++++..++.+..+|..+++..+.... ..... .+..+.-.| .+..+..++.++.+..
T Consensus 178 ~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~ 253 (376)
T 3q7m_A 178 LRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRI--SQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA 253 (376)
T ss_dssp -CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEEC--CC-----------CCCCCCEEETTEEEEECTTSCEEE
T ss_pred ecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEec--ccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE
Confidence 00112222 45678888899999999887763221111 00000 000011111 2456777778899999
Q ss_pred EeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeee-eecCC
Q 016982 171 FSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVA-FRDLP 249 (379)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~ 249 (379)
+|. .+++.+-.... .....+.. ++..++.++.++.+..+|..+++.. .... .....
T Consensus 254 ~d~------------------~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~-w~~~~~~~~~ 310 (376)
T 3q7m_A 254 LDL------------------RSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTL-WTQSDLLHRL 310 (376)
T ss_dssp EET------------------TTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEE-EEECTTTTSC
T ss_pred EEC------------------CCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEE-EeecccCCCc
Confidence 996 55665544432 22334443 3567777888999999999888744 3322 11222
Q ss_pred eeeEEEecCCcEEEEEeCCCeEEEEecCCC
Q 016982 250 LRDVLFVSEKMVIGVGFDCNPMVFAADETG 279 (379)
Q Consensus 250 i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~ 279 (379)
+..... .++.+++++.++.+..++.....
T Consensus 311 ~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 311 LTSPVL-YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp CCCCEE-ETTEEEEECTTSEEEEEETTTCC
T ss_pred ccCCEE-ECCEEEEEeCCCeEEEEECCCCc
Confidence 333333 25666667778888888866543
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.02 E-value=1.3e-10 Score=99.43 Aligned_cols=185 Identities=14% Similarity=0.032 Sum_probs=99.6
Q ss_pred CCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCC
Q 016982 65 RSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHD 144 (379)
Q Consensus 65 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~ 144 (379)
++..+++++.|+.|..||..+++..-.+.. ..+.+..+..++..+++++.|+.|+.||..+++..+ .. ..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w---~~-~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT---KL-PFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTTCCEEEC-----CCSE---EC-SCCH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee---ee-eccC
Confidence 467899999999999999999986655532 445555556677788888899999999998776311 11 1110
Q ss_pred -cCEE-EEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEE
Q 016982 145 -SSVT-SVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYV 222 (379)
Q Consensus 145 -~~v~-~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 222 (379)
..+. ...+. .+..+++++.++.++.||. .+++.+..+..+. ...++|++..++++
T Consensus 80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~------------------~tG~~~w~~~~~~----~~~~~p~~~~v~~~ 136 (369)
T 2hz6_A 80 PELVQASPCRS-SDGILYMGKKQDIWYVIDL------------------LTGEKQQTLSSAF----ADSLSPSTSLLYLG 136 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECC------------------C--------------------------EEEE
T ss_pred ccccccCceEe-cCCEEEEEeCCCEEEEEEC------------------CCCcEEEEecCCC----cccccccCCEEEEE
Confidence 0010 00111 3456778888999999996 5666665554432 23456788889999
Q ss_pred cCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecC----CcEEEEEeCCCeEEEEecCCC-cEEE
Q 016982 223 GHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSE----KMVIGVGFDCNPMVFAADETG-IWTF 283 (379)
Q Consensus 223 ~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~d~~~~i~~~~~~~-~~~~ 283 (379)
+.++.|+.||..+++.+ ..+.... ....++.++ +.+++++.++.+..|+..... .|+.
T Consensus 137 ~~dg~v~a~d~~tG~~~-W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 137 RTEYTITMYDTKTRELR-WNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp EEEEEEECCCSSSSSCC-CEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred ecCCEEEEEECCCCCEE-EeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 99999999999887754 3332221 123334442 567778888889888876443 4654
No 246
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.02 E-value=2.1e-06 Score=68.36 Aligned_cols=207 Identities=9% Similarity=0.095 Sum_probs=133.0
Q ss_pred EEeccCCCceEEEEEcCCCCEEE-EEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEE
Q 016982 48 HVLQKHDQIVSGIDWSVRSNRIV-TVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICY 126 (379)
Q Consensus 48 ~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~ 126 (379)
+.+.+-...+..++|+|+++.|+ +...++.|...|.. ++....+.+. .......+++.+++.++++.-.++.+.+++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~-g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD-FVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS-SCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC-CCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 45666667899999999876655 46678889999988 7666665432 235778899998887666655678898988
Q ss_pred eecCCceeEEEEEe-----ecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-
Q 016982 127 YEQENNWWVSKLIR-----KRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL- 200 (379)
Q Consensus 127 ~~~~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 200 (379)
+............. .........++|+|.++.|.++.......+|.+.. . .....+..+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-----~----------~~~~~l~i~~ 162 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-----L----------LSSNELHISK 162 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-----T----------TCSSCCEEEE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-----c----------ccCCceeeec
Confidence 87655311122221 12345578999999987777777665666665520 0 000011111
Q ss_pred ------ecCCcceEEEEECCC-CCEEEEEcCCCeEEEEECCCCCceeeeeeeec---------CCeeeEEEecCCcEEEE
Q 016982 201 ------DLSFSWAFGVKWSPS-GNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD---------LPLRDVLFVSEKMVIGV 264 (379)
Q Consensus 201 ------~~~~~~v~~~~~sp~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---------~~i~~~~~s~~~~~l~~ 264 (379)
..+...+.+++++|. +++++.......+.++|.... .+..+.-.. ...-.|+|.++|++.++
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 012234688999994 566667778889999996654 223332211 14578999999997777
Q ss_pred EeCCCeEEE
Q 016982 265 GFDCNPMVF 273 (379)
Q Consensus 265 ~~d~~~~i~ 273 (379)
+..+.++.|
T Consensus 241 sE~n~~y~f 249 (255)
T 3qqz_A 241 SEPNRFYRF 249 (255)
T ss_dssp ETTTEEEEE
T ss_pred cCCceEEEE
Confidence 766544444
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.99 E-value=3.1e-06 Score=67.37 Aligned_cols=203 Identities=12% Similarity=0.118 Sum_probs=130.4
Q ss_pred eeccCcceeEEEeCCCCcEE-EEEecCCeEEEEEecCCceEEEEEe--ccCCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q 016982 6 VHQFAQCITCHAWSPDHAMV-AFCPNNNEVHIYKLIQEKWEKLHVL--QKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN 82 (379)
Q Consensus 6 ~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 82 (379)
+-+-...+..++|+|+++.| ++...++.|...|.. + +.++.+ .+. .....+++.+++.++++.-.++.+.+++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g--~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G--DLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C--CEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C--CEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 34455789999999976654 556677888888887 4 344443 332 4567899998887766665678899998
Q ss_pred ccCCce---eeeEEe----ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEe------ecCCcCEEE
Q 016982 83 QEGSEW---VPTLVI----LRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIR------KRHDSSVTS 149 (379)
Q Consensus 83 ~~~~~~---~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~------~~~~~~v~~ 149 (379)
+..... .....+ ...+.....++|+|.++.|.++.+.....+|.++..........+. ..+...+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 765542 122211 1234567899999999888888776666777776211000011110 112345789
Q ss_pred EEEcCCC-cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCC---------cceEEEEECCCCCEE
Q 016982 150 VAWHPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF---------SWAFGVKWSPSGNTL 219 (379)
Q Consensus 150 ~~~~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~sp~~~~l 219 (379)
++++|.. ++++.......+.++|. .++.+..+.... ...-.++|.|+|++.
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~-------------------~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly 238 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTL-------------------VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY 238 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECT-------------------TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcC-------------------CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE
Confidence 9999965 56666667788888885 344444433221 245789999999855
Q ss_pred EEEcCCCeEEEEE
Q 016982 220 AYVGHNSMIYFVD 232 (379)
Q Consensus 220 ~~~~~d~~i~v~d 232 (379)
++ ++.+.++.+.
T Consensus 239 Iv-sE~n~~y~f~ 250 (255)
T 3qqz_A 239 IV-SEPNRFYRFT 250 (255)
T ss_dssp EE-ETTTEEEEEE
T ss_pred EE-cCCceEEEEE
Confidence 55 6667777775
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.98 E-value=1.2e-06 Score=72.93 Aligned_cols=228 Identities=9% Similarity=-0.050 Sum_probs=131.7
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-C-eEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-R-NSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-~i~vw~~~~~~~ 88 (379)
.....++|+++|+++++-..++.|..||..+. ....+. .......+++.++|+++++.... + .|..++..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN---QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC---EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc---eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 56788999999997777667889999987764 222222 23468899999999866554332 2 466777777765
Q ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEE-------EeecCCcCEEEEEEcCCCcEEE-
Q 016982 89 VPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKL-------IRKRHDSSVTSVAWHPNNVFLA- 160 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~p~~~~l~- 160 (379)
...... ........++..+++..+++-..++.|+.+|...+... +... ...........+ +|+++.|.
T Consensus 108 ~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~-v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 108 ETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS-IWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE-EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe-EEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 433322 22223345555555544554445788877776543210 1100 000111234555 77876554
Q ss_pred EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCce-
Q 016982 161 TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL- 239 (379)
Q Consensus 161 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~- 239 (379)
+-...+.|..+++... .. ....+....+ .....++++++|+++++....+.|.++|.. ++..
T Consensus 184 ~d~~~~~I~~~~~~~~------g~------~~~~~~~~~~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDST------DK------PGEPEIFVEQ----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp EETTTTEEEEEEBCTT------SC------BCCCEEEEES----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEE
T ss_pred EeCCCCEEEEEEeCCC------CC------CCccEEEecc----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEE
Confidence 4455788999987310 00 0001111111 235678999999887776677899999965 3311
Q ss_pred eeeeeeecCCeeeEEEe---cCCcEEE
Q 016982 240 AQNVAFRDLPLRDVLFV---SEKMVIG 263 (379)
Q Consensus 240 ~~~~~~~~~~i~~~~~s---~~~~~l~ 263 (379)
+..+.......++++|. |++..|.
T Consensus 247 ~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 247 IAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred EeecccccCCceEEEEecccCCCCEEE
Confidence 12222222457899998 7866554
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.98 E-value=3.9e-07 Score=72.10 Aligned_cols=181 Identities=14% Similarity=0.186 Sum_probs=119.0
Q ss_pred eeEEEeCCCCcEEEEEecCC--eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCcee
Q 016982 13 ITCHAWSPDHAMVAFCPNNN--EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWV 89 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~ 89 (379)
...+.|+ ++.++.+.+.+| .|+.+|+++++ .+..+.-.. ........++++.|.... .++.+.++|..+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--v~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--TLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--EEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCc--EEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 4788888 676667776666 89999999984 444443322 333333333455655544 5789999999999987
Q ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee-cCC---cCEEEEEEcCCCcEEEEeeCC
Q 016982 90 PTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK-RHD---SSVTSVAWHPNNVFLATTSTD 165 (379)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~~~---~~v~~~~~~p~~~~l~~~~~d 165 (379)
..+.... .-..+ +++++.|+.+..++.|.++|..+.+ ....+.. ... ..++.+.|. +|+.++....+
T Consensus 121 ~ti~~~~---eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~---v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 121 RSFNYDG---EGWGL--THNDQYLIMSDGTPVLRFLDPESLT---PVRTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp EEEECSS---CCCCE--EECSSCEEECCSSSEEEEECTTTCS---EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EEEECCC---CceEE--ecCCCEEEEECCCCeEEEEcCCCCe---EEEEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 7775422 22333 3567777777767889998887766 3444322 111 334567776 77777666678
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEeecC------------CcceEEEEECCCCCEEEEEcC
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS------------FSWAFGVKWSPSGNTLAYVGH 224 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~sp~~~~l~~~~~ 224 (379)
+.|.+.|. .+++.+..+... ....+.++|+|+++.|+..+.
T Consensus 192 ~~I~vIDp------------------~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 192 NKIVRIDP------------------ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SEEEEECT------------------TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEEC------------------CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 89999996 566666655432 124689999998887777664
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=2.2e-06 Score=69.65 Aligned_cols=226 Identities=9% Similarity=0.017 Sum_probs=130.9
Q ss_pred CcEEEEEecCCeEEEEEecCCceEE---EEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCceeeeEEeecC
Q 016982 22 HAMVAFCPNNNEVHIYKLIQEKWEK---LHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWVPTLVILRL 97 (379)
Q Consensus 22 ~~~l~~~~~dg~i~i~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~ 97 (379)
|.+|..+.. +.|+.+++.+..... ...+......+..++|+++++.|+.+. .++.|..+++.+....... ...
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~--~~~ 77 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII--RQD 77 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE--CTT
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE--ECC
Confidence 345666654 588989987653210 111111223568999999776666554 5678999998776432211 222
Q ss_pred CCceeEEEECCCCCEEEEE-eCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC---CCeEEEEec
Q 016982 98 NRAALCVQWSPKENKFAVG-SGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST---DGKCRVFST 173 (379)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---d~~i~v~d~ 173 (379)
......++++|++..|+.+ ...+.|.+++++.... .... .........++++|++..|..+.. .+.|..+++
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~---~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR---RVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE---EEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 2567899999976555554 4467898888765431 1222 222245689999996555544443 367877775
Q ss_pred cccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCceeeeeeeecCCee
Q 016982 174 FIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSPLAQNVAFRDLPLR 251 (379)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~i~ 251 (379)
. +.....+ .........++++|++..|+.+ ...+.|.++|+.... ....+.. .....
T Consensus 154 d-------------------g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~-~~~P~ 212 (267)
T 1npe_A 154 D-------------------GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-RRKVLEG-LQYPF 212 (267)
T ss_dssp T-------------------SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-EEEEEEC-CCSEE
T ss_pred C-------------------CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-eEEEecC-CCCce
Confidence 2 1111111 1222457899999987766554 456899999987543 2122222 22345
Q ss_pred eEEEecCCcEEEEEe-CCCeEEEEec
Q 016982 252 DVLFVSEKMVIGVGF-DCNPMVFAAD 276 (379)
Q Consensus 252 ~~~~s~~~~~l~~~~-d~~~~i~~~~ 276 (379)
.++.. ++.++++.. .+.+..++..
T Consensus 213 gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 213 AVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 66654 344444443 3456555544
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=5.4e-07 Score=83.22 Aligned_cols=194 Identities=11% Similarity=0.116 Sum_probs=114.5
Q ss_pred CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCc----------e-EEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 22 HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQI----------V-SGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 22 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
+..+++++.++.|+-+|..++ +.+..+...... + ..+++ .+..++.++.|+.|..+|..+++.+-
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASG--KELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTC--CEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCC--hhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEee
Confidence 456667778899999999888 455444332110 0 11222 25678888899999999999998665
Q ss_pred eEEeecCCCceeEEEECC--CCCEEEEEeC------CCeEEEEEeecCCceeEEEEEeecC-------------------
Q 016982 91 TLVILRLNRAALCVQWSP--KENKFAVGSG------AKTVCICYYEQENNWWVSKLIRKRH------------------- 143 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~--~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~~~~------------------- 143 (379)
........ ....+.-+| .+..++++.. ++.|..+|..+++..+..... ...
T Consensus 142 ~~~~~~~~-~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 142 SQQTTDPA-KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV-PGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEECSCTT-SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS-CCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeccCCCC-CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc-CCCCCccccccccccccccCCc
Confidence 55432111 011111122 1345555543 588999999888743322211 000
Q ss_pred ---------CcCEEEEEEcCCCcEEEEeeCCCe-------------------EEEEeccccccccccccCCCccCCcccc
Q 016982 144 ---------DSSVTSVAWHPNNVFLATTSTDGK-------------------CRVFSTFIKGVDIKEKKEGTSSDTKFGE 195 (379)
Q Consensus 144 ---------~~~v~~~~~~p~~~~l~~~~~d~~-------------------i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (379)
......+++.|+...++.++.++. |..+|. .+++
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~------------------~tG~ 281 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRP------------------DTGK 281 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT------------------TTCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcC------------------CCCc
Confidence 011124678888888888776653 777775 5666
Q ss_pred eEEEeec--CC-------cceEEEEECCCCC---EEEEEcCCCeEEEEECCCCCce
Q 016982 196 QILQLDL--SF-------SWAFGVKWSPSGN---TLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 196 ~~~~~~~--~~-------~~v~~~~~sp~~~---~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
.+-.++. |. .+.....+..+|+ .++.++.+|.++++|..+++.+
T Consensus 282 ~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 282 LAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 6655543 21 1222222223565 6888899999999999888743
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.91 E-value=1.6e-05 Score=75.34 Aligned_cols=236 Identities=10% Similarity=0.044 Sum_probs=150.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEec-----cCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQ-----KHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG 85 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 85 (379)
..|.++...++|.+.+ |+.+ -|.+|+..++.+....... -....|.++...++|+.. .|+.++-|..++..+
T Consensus 263 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~ 339 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIR 339 (795)
T ss_dssp SBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGG
T ss_pred CeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCc
Confidence 5699999988887554 4454 5888998776333221111 123579999999888654 466666788998766
Q ss_pred CceeeeEEee----cCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeec--------CCcCEEEEEEc
Q 016982 86 SEWVPTLVIL----RLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR--------HDSSVTSVAWH 153 (379)
Q Consensus 86 ~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~ 153 (379)
.......... -....|.++...++|+ |.+|+.++-|..|+..++. ...+... ....|.++...
T Consensus 340 ~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d 414 (795)
T 4a2l_A 340 NRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQR----FTSYTLQEDESARGIGSNNIKAVYVD 414 (795)
T ss_dssp GSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCC----EEEECCC------CCSCSCEEEEEEE
T ss_pred ccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCc----EEEEecCCCCcccCCCCccEEEEEEc
Confidence 5422211000 0235688998888876 5557777678888766554 2222111 23578999988
Q ss_pred CCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-----cCCcceEEEEECCCCCEEEEEcCCCeE
Q 016982 154 PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-----LSFSWAFGVKWSPSGNTLAYVGHNSMI 228 (379)
Q Consensus 154 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~~~~d~~i 228 (379)
++++.|..|+.++-+..||.. +++ ...+. .....|.++...++|.+.+... +.+
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~------------------~~~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl 473 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRN------------------SGQ-VENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SAL 473 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETT------------------TCC-EEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCE
T ss_pred CCCCEEEEEeCcCceeEEeCC------------------CCc-EEEeecCCCCcCCCeeEEEEECCCCCEEEEec--Cce
Confidence 888856667777779999852 222 22221 1245689999999888666543 458
Q ss_pred EEEECCCCCceeeeeee-------ecCCeeeEEEecCCcEEEEEeCCCeEEEEecCC
Q 016982 229 YFVDDVGPSPLAQNVAF-------RDLPLRDVLFVSEKMVIGVGFDCNPMVFAADET 278 (379)
Q Consensus 229 ~v~d~~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~ 278 (379)
.+||..+.. . ..+.. ....|.++...++|++.+++. +.+..|+....
T Consensus 474 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~ 527 (795)
T 4a2l_A 474 VRFNPEQRS-F-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL 527 (795)
T ss_dssp EEEETTTTE-E-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT
T ss_pred eEEeCCCCe-E-EEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC
Confidence 889976643 2 22211 235688899999999888776 67777776543
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.90 E-value=1.3e-05 Score=76.00 Aligned_cols=234 Identities=10% Similarity=0.016 Sum_probs=150.7
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEecc----CCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK----HDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
..|.++...++|.+ -.|+.++-|..|+..++.+........ ....|.++...++|++. .|+.++-|..|+..++
T Consensus 310 ~~i~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 310 RSVRSIFMDSQGGM-WLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQ 387 (795)
T ss_dssp SCEEEEEECTTSCE-EEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTC
T ss_pred CcEEEEEEeCCcCE-EEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCC
Confidence 57999999988874 456677789999877654333322111 23468999998888654 4666767999998877
Q ss_pred ceeeeEEee------cCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee----cCCcCEEEEEEcCCC
Q 016982 87 EWVPTLVIL------RLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK----RHDSSVTSVAWHPNN 156 (379)
Q Consensus 87 ~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p~~ 156 (379)
+........ -....|.++...++++.|.+|+.++-|..+|..++. ...+.. .....|.++...+++
T Consensus 388 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~----~~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 388 RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ----VENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC----EEEECTTTSCCSCSCEEEEEECSSS
T ss_pred cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc----EEEeecCCCCcCCCeeEEEEECCCC
Confidence 543321100 023568899888888857777877778888877665 222211 134578999988888
Q ss_pred cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-------cCCcceEEEEECCCCCEEEEEcCCCeEE
Q 016982 157 VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-------LSFSWAFGVKWSPSGNTLAYVGHNSMIY 229 (379)
Q Consensus 157 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 229 (379)
++.+.. .+ .+.+||.. +++ ...+. .....|.++...++|.+.+... +.|.
T Consensus 464 ~lwigt-~~-Gl~~~~~~------------------~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~ 520 (795)
T 4a2l_A 464 NLWLGT-LS-ALVRFNPE------------------QRS-FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLS 520 (795)
T ss_dssp CEEEEE-SS-CEEEEETT------------------TTE-EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEE
T ss_pred CEEEEe-cC-ceeEEeCC------------------CCe-EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceE
Confidence 755544 44 58888852 211 11221 1235688999999998766554 5588
Q ss_pred EEECCCCCceeeeee-------eecCCeeeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 230 FVDDVGPSPLAQNVA-------FRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 230 v~d~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
.||..+... .+. .....|.++...++|.+.+++.. .+..|+...
T Consensus 521 ~~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~ 571 (795)
T 4a2l_A 521 VFKQEGLDI---QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKD 571 (795)
T ss_dssp EEEEETTEE---EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTT
T ss_pred EEeCCCCeE---EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCC
Confidence 888765431 111 12356888998899998876665 677776443
No 254
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.89 E-value=8.6e-08 Score=88.63 Aligned_cols=116 Identities=13% Similarity=0.194 Sum_probs=80.3
Q ss_pred EEEeCC-CCcEEEEEecCC-----------eEEEEEecCCceEEEEEeccC-CCceEEEEEcCCCCEEEEEeC-CCeEEE
Q 016982 15 CHAWSP-DHAMVAFCPNNN-----------EVHIYKLIQEKWEKLHVLQKH-DQIVSGIDWSVRSNRIVTVSH-DRNSYV 80 (379)
Q Consensus 15 ~~~~s~-~~~~l~~~~~dg-----------~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~v 80 (379)
.+++.| ++++++.|+.+. .+.+||..++++..+..+... .....++++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556667 888888887542 688999998877666555432 233445778889999999884 457999
Q ss_pred EeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CC-----CeEEEEEeecCC
Q 016982 81 WNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GA-----KTVCICYYEQEN 131 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~v~i~~~~~~~ 131 (379)
||..+.++...-.. .....-.+++..+++++++.|+ .+ ..+.+||..+..
T Consensus 270 yd~~t~~W~~~~~~-~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDM-QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCC-SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCC-CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99998876654321 2222234556667899999988 34 468888887654
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=4.3e-07 Score=71.84 Aligned_cols=179 Identities=9% Similarity=0.049 Sum_probs=117.1
Q ss_pred eeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEE-EEEeCCCeEEEEeccCCceeee
Q 016982 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRI-VTVSHDRNSYVWNQEGSEWVPT 91 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~ 91 (379)
...+.|+ ++.+..+.+.+|.|+.+|+++++..... +.... --..+++. ++.| +..-.++.+.+||..+.+.+..
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-FAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-CEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-ceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4688887 4566677778889999999998533322 33211 11234444 4444 4445688999999999998877
Q ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee-cCC---cCEEEEEEcCCCcEEEEeeCCCe
Q 016982 92 LVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK-RHD---SSVTSVAWHPNNVFLATTSTDGK 167 (379)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~~~---~~v~~~~~~p~~~~l~~~~~d~~ 167 (379)
+... ..-..++ ++++.|+.+..++.|.++|..+.+ ....+.. .+. ..++.+.|. +|+.++....+..
T Consensus 132 i~~~---~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~---v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 132 TRYS---GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA---LVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp EECS---SCCCCEE--EETTEEEEECSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred EeCC---CceeEEe--cCCCEEEEECCCCEEEEEcCCCCe---EEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 7642 2223444 567888887778899998887766 3444321 222 245677777 7776666667889
Q ss_pred EEEEeccccccccccccCCCccCCcccceEEEeecC-------------CcceEEEEECCCCCEEEEEc
Q 016982 168 CRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS-------------FSWAFGVKWSPSGNTLAYVG 223 (379)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~l~~~~ 223 (379)
|.+.|. .+++.+..+... ..-.+.++++|+++.|+..+
T Consensus 203 I~vIDp------------------~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 203 VLEIDP------------------ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEECT------------------TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEeC------------------CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999996 566666665432 13468999999766665554
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.83 E-value=4.4e-06 Score=66.11 Aligned_cols=189 Identities=10% Similarity=-0.032 Sum_probs=119.9
Q ss_pred EEEEEeccCCCc--eEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEE-EeCCCe
Q 016982 45 EKLHVLQKHDQI--VSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAV-GSGAKT 121 (379)
Q Consensus 45 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~ 121 (379)
+.+.++. |... ...+.|+ ++.+..+.+.+|.|+++|+++++....+ +.. ..-...+++. ++.|.. .-.++.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~--g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASD--GERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEEC--SSCEEEEESSSCE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEe--CCEEEEEEccCCE
Confidence 3455553 4432 3678887 3556677788889999999999877766 322 1111234443 444444 445889
Q ss_pred EEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee
Q 016982 122 VCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD 201 (379)
Q Consensus 122 v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (379)
+.+||..+.+ ....+... ..-..++ ++++.|+.+..++.|.++|. .+.+.+.++.
T Consensus 118 v~V~D~~Tl~---~~~ti~~~--~eGwGLt--~Dg~~L~vSdGs~~l~~iDp------------------~T~~v~~~I~ 172 (268)
T 3nok_A 118 LFTWSGMPPQ---RERTTRYS--GEGWGLC--YWNGKLVRSDGGTMLTFHEP------------------DGFALVGAVQ 172 (268)
T ss_dssp EEEEETTTTE---EEEEEECS--SCCCCEE--EETTEEEEECSSSEEEEECT------------------TTCCEEEEEE
T ss_pred EEEEECCcCc---EEEEEeCC--CceeEEe--cCCCEEEEECCCCEEEEEcC------------------CCCeEEEEEE
Confidence 9999998877 45555222 2223444 46777777777889999996 5566666554
Q ss_pred cC--C---cceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeee-------------cCCeeeEEEecCCc-EE
Q 016982 202 LS--F---SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR-------------DLPLRDVLFVSEKM-VI 262 (379)
Q Consensus 202 ~~--~---~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~-~l 262 (379)
.. . ..++.+.|. +|+..+..-.++.|.+.|..+++. +..+... ..-.+.|+|+|+++ ++
T Consensus 173 V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V-~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 173 VKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTV-VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE-EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred eCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE-EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 31 1 134667777 776555555688999999988763 3444321 13468899999755 55
Q ss_pred EEEe
Q 016982 263 GVGF 266 (379)
Q Consensus 263 ~~~~ 266 (379)
++|.
T Consensus 251 VTGK 254 (268)
T 3nok_A 251 MTGK 254 (268)
T ss_dssp EEET
T ss_pred EeCC
Confidence 5554
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.83 E-value=8.9e-06 Score=63.80 Aligned_cols=190 Identities=11% Similarity=0.059 Sum_probs=117.8
Q ss_pred EEEEEeccCCC--ceEEEEEcCCCCEEEEEeCC--CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEE-eCC
Q 016982 45 EKLHVLQKHDQ--IVSGIDWSVRSNRIVTVSHD--RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVG-SGA 119 (379)
Q Consensus 45 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 119 (379)
+.+.+++ |+. -...+.|++ +.+..+.+.+ ..|+.+|+.+++......+.. ........+.++.|... -.+
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---~~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP---PYFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT---TCCEEEEEEETTEEEEEESSS
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC---CcceeEEEEeCCEEEEEEeeC
Confidence 5556663 543 356899986 5555666654 489999999999777665422 22222222234444444 458
Q ss_pred CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEE
Q 016982 120 KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ 199 (379)
Q Consensus 120 ~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
+.+.+||.++.+ ....+.....+ ..++ ++++.|+.+..++.|.++|. .+.+.+.+
T Consensus 85 ~~v~v~D~~tl~---~~~ti~~~~~G--wglt--~dg~~L~vSdgs~~l~~iDp------------------~t~~~~~~ 139 (243)
T 3mbr_X 85 HEGFVYDLATLT---PRARFRYPGEG--WALT--SDDSHLYMSDGTAVIRKLDP------------------DTLQQVGS 139 (243)
T ss_dssp SEEEEEETTTTE---EEEEEECSSCC--CEEE--ECSSCEEEECSSSEEEEECT------------------TTCCEEEE
T ss_pred CEEEEEECCcCc---EEEEEeCCCCc--eEEe--eCCCEEEEECCCCeEEEEeC------------------CCCeEEEE
Confidence 899999988877 45555222222 3444 46766666666889999996 55566665
Q ss_pred eecCC-----cceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeee-------------cCCeeeEEEecCCcE
Q 016982 200 LDLSF-----SWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFR-------------DLPLRDVLFVSEKMV 261 (379)
Q Consensus 200 ~~~~~-----~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~ 261 (379)
+.... ..++.+.+. +|+..+..-.+..|.+.|..+++. +..+... ..-.+.++++|+++.
T Consensus 140 I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V-~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 140 IKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKV-VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBE-EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred EEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCE-EEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 54321 235566665 666555555678999999988763 3444311 134688999997665
Q ss_pred EE-EEe
Q 016982 262 IG-VGF 266 (379)
Q Consensus 262 l~-~~~ 266 (379)
|. +|.
T Consensus 218 lfVTGK 223 (243)
T 3mbr_X 218 LFVTGK 223 (243)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 54 553
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.82 E-value=3.7e-06 Score=76.04 Aligned_cols=106 Identities=9% Similarity=0.072 Sum_probs=62.7
Q ss_pred CcEEEEEec-CCeEEEEEe-cCCceEEEEEeccCCC-c----------eEEEEEcCCCCEEEEEeCCCeEEEEeccCCce
Q 016982 22 HAMVAFCPN-NNEVHIYKL-IQEKWEKLHVLQKHDQ-I----------VSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW 88 (379)
Q Consensus 22 ~~~l~~~~~-dg~i~i~~~-~~~~~~~~~~~~~~~~-~----------v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~ 88 (379)
+..+++++. ++.|.-+|. .+++ .+..+..... . -..+++ .+..++.++.|+.|..+|..+++.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGK--IVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS--EEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCcc--EEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 345556666 789999999 7873 4444332111 0 011222 256788888899999999999986
Q ss_pred eeeEEeecCCCceeEEEECC--CCCEEEEEeC------CCeEEEEEeecCCc
Q 016982 89 VPTLVILRLNRAALCVQWSP--KENKFAVGSG------AKTVCICYYEQENN 132 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~------d~~v~i~~~~~~~~ 132 (379)
+-......+... ..+.-+| .+..+++++. ++.|..+|..+++.
T Consensus 138 ~W~~~~~~~~~~-~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 138 NWEVEVCDPKVG-STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp EEEEECCCGGGT-CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred EEEecCCCCCcc-ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 655543221110 0111122 1345555554 78999999988874
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.81 E-value=6.7e-06 Score=64.49 Aligned_cols=183 Identities=10% Similarity=0.098 Sum_probs=116.6
Q ss_pred cceeEEEeCCCCcEEEEEecC--CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEE-EeCCCeEEEEeccCCc
Q 016982 11 QCITCHAWSPDHAMVAFCPNN--NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVT-VSHDRNSYVWNQEGSE 87 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~ 87 (379)
.-...+.|++ +.++.+.+.+ ..|+.+|+.+++......+..+.- -..+++ .++.|.. .-.++.+.++|..+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~--~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF-GAGIVA--WRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC-EEEEEE--ETTEEEEEESSSSEEEEEETTTTE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc-eeEEEE--eCCEEEEEEeeCCEEEEEECCcCc
Confidence 4566899986 5555665554 489999999984333333332211 123333 3445544 4568899999999998
Q ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee-cCC---cCEEEEEEcCCCcEEEEee
Q 016982 88 WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK-RHD---SSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~~~---~~v~~~~~~p~~~~l~~~~ 163 (379)
.+..+... ..-..++ +++..|+++..++.|.++|..+.+ ..+.+.. .+. ..++.+.|. +|+.++...
T Consensus 97 ~~~ti~~~---~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~---~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw 167 (243)
T 3mbr_X 97 PRARFRYP---GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ---QVGSIKVTAGGRPLDNLNELEWV-NGELLANVW 167 (243)
T ss_dssp EEEEEECS---SCCCEEE--ECSSCEEEECSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EEEEEeCC---CCceEEe--eCCCEEEEECCCCeEEEEeCCCCe---EEEEEEEccCCcccccceeeEEe-CCEEEEEEC
Confidence 87777543 2224444 567777777778889998887766 3444421 121 345667766 677666666
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecC-------------CcceEEEEECCCCCEEEEEcC
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS-------------FSWAFGVKWSPSGNTLAYVGH 224 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~l~~~~~ 224 (379)
.+..|.+.|. .+++.+..+... ..-.+.++++|+++.|+..+.
T Consensus 168 ~s~~I~vIDp------------------~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 168 LTSRIARIDP------------------ASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTEEEEECT------------------TTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEEC------------------CCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6888999996 556665555321 134689999998777666653
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=1.3e-05 Score=69.75 Aligned_cols=154 Identities=10% Similarity=0.158 Sum_probs=96.0
Q ss_pred ceeEEEeCC-CCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-C----eEEEEeccC
Q 016982 12 CITCHAWSP-DHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-R----NSYVWNQEG 85 (379)
Q Consensus 12 ~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~vw~~~~ 85 (379)
....++++| ++..|.++...+.|+.+|+.++. +..+.........++|++++++|+.+... + .+...+. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~---v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY---VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE---EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE---EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 567889998 45556655555789999988763 22233344567899999999966666542 1 2333443 3
Q ss_pred CceeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcE-EEEee
Q 016982 86 SEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVF-LATTS 163 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~ 163 (379)
+.......+. .-.....++++| ++.++++-..++.|..++..... ...............++|+|++++ +++-.
T Consensus 214 g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 214 SGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 3322111111 234567889999 67666666667888888876554 112221222244678999999984 45555
Q ss_pred CCCeEEEEec
Q 016982 164 TDGKCRVFST 173 (379)
Q Consensus 164 ~d~~i~v~d~ 173 (379)
..+.|..++.
T Consensus 290 ~~~~I~~~~~ 299 (430)
T 3tc9_A 290 NQHYILRSDY 299 (430)
T ss_dssp TTTEEEEEEE
T ss_pred CCCEEEEEeC
Confidence 6788999876
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.78 E-value=8.4e-06 Score=73.81 Aligned_cols=195 Identities=13% Similarity=0.097 Sum_probs=110.3
Q ss_pred CcEEEEEec-CCeEEEEEe-cCCceEEEEEeccCCC-----------ceEEEEEcCCCCE----EEEEeCCCeEEEEecc
Q 016982 22 HAMVAFCPN-NNEVHIYKL-IQEKWEKLHVLQKHDQ-----------IVSGIDWSVRSNR----IVTVSHDRNSYVWNQE 84 (379)
Q Consensus 22 ~~~l~~~~~-dg~i~i~~~-~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----l~~~~~d~~i~vw~~~ 84 (379)
+..+++++. ++.|.-+|. .++ +.+-.+..... ....++++|.+.. |+.++.|+.|.-+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG--~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPG--TILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTT--SEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCC--cEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 345666666 789999999 787 34444332211 0123555444444 8888899999999999
Q ss_pred CCceeeeEEeecCCC--cee-EEEECCCCCEEEEEe------CCCeEEEEEeecCCceeEEEEEeecC------------
Q 016982 85 GSEWVPTLVILRLNR--AAL-CVQWSPKENKFAVGS------GAKTVCICYYEQENNWWVSKLIRKRH------------ 143 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~--~v~-~~~~~~~~~~l~~~~------~d~~v~i~~~~~~~~~~~~~~~~~~~------------ 143 (379)
+++.+-......+.. .+. ...+. ++ .+++++ .++.|+.+|.++++..+.........
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 998655543322110 111 11111 33 455554 37899999998887432222110000
Q ss_pred ---------------------CcCE-EEEEEcCCCcEEEEeeCCC----------------eEEEEeccccccccccccC
Q 016982 144 ---------------------DSSV-TSVAWHPNNVFLATTSTDG----------------KCRVFSTFIKGVDIKEKKE 185 (379)
Q Consensus 144 ---------------------~~~v-~~~~~~p~~~~l~~~~~d~----------------~i~v~d~~~~~~~~~~~~~ 185 (379)
...+ ..+++.+...+++.++.++ .|..+|.
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~------------ 285 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDA------------ 285 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEET------------
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeC------------
Confidence 0000 1345666666777666543 6667775
Q ss_pred CCccCCcccceEEEeecCC----------cceEEEEEC-CCC---CEEEEEcCCCeEEEEECCCCCce
Q 016982 186 GTSSDTKFGEQILQLDLSF----------SWAFGVKWS-PSG---NTLAYVGHNSMIYFVDDVGPSPL 239 (379)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~----------~~v~~~~~s-p~~---~~l~~~~~d~~i~v~d~~~~~~~ 239 (379)
.+++.+-.++... .++. +... .+| ..++.++.+|.++++|..+++.+
T Consensus 286 ------~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 286 ------DTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp ------TTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ------CCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 5666655544321 1111 2222 467 46777889999999999887644
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=3.3e-05 Score=73.08 Aligned_cols=236 Identities=9% Similarity=-0.019 Sum_probs=143.2
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEE-------e-----ccCCCceEEEEEcCCCCEEEEEeCCCeE
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHV-------L-----QKHDQIVSGIDWSVRSNRIVTVSHDRNS 78 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (379)
..|.++...++|.+. .|+..+-|.+++..+........ . .-....|.++...++|.+ -.|+.++-|
T Consensus 258 ~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNI-WIGTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCE-EEEEBSSCE
T ss_pred ceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCE-EEEecCCeE
Confidence 568899988887654 45564678888987763322221 0 012457899999888864 445656668
Q ss_pred EEEeccCCceeeeEEe-------ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEe---ecCCcCEE
Q 016982 79 YVWNQEGSEWVPTLVI-------LRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIR---KRHDSSVT 148 (379)
Q Consensus 79 ~vw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~---~~~~~~v~ 148 (379)
..++..+......... .-....|.++...++|+ |.+|+.++-|..++..+.. ...+. ......|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~----~~~~~~~~~~~~~~v~ 410 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRV----AIYNKENRELLSNSVL 410 (781)
T ss_dssp EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEE----EECC-----CCCSBEE
T ss_pred EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCe----EEEccCCCCCCCcceE
Confidence 8898876643221100 00235688998888776 4566655667777765432 11110 12345788
Q ss_pred EEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee---cCCcceEEEEECCCCCEEEEEcCC
Q 016982 149 SVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD---LSFSWAFGVKWSPSGNTLAYVGHN 225 (379)
Q Consensus 149 ~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d 225 (379)
++...+++++.+ |+.++.+..+|. .++ ....+. .....|.++...++|.+.+. ..
T Consensus 411 ~i~~d~~g~lWi-gt~~~Gl~~~~~------------------~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~- 468 (781)
T 3v9f_A 411 CSLKDSEGNLWF-GTYLGNISYYNT------------------RLK-KFQIIELEKNELLDVRVFYEDKNKKIWIG-TH- 468 (781)
T ss_dssp EEEECTTSCEEE-EETTEEEEEECS------------------SSC-EEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-
T ss_pred EEEECCCCCEEE-EeccCCEEEEcC------------------CCC-cEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-
Confidence 998887776554 666667888874 222 222222 12456889999988876554 44
Q ss_pred CeEEEEECCCCCceeeeeeee-----cCCeeeEEEecCCcEEEEEeCCCeEEEEec
Q 016982 226 SMIYFVDDVGPSPLAQNVAFR-----DLPLRDVLFVSEKMVIGVGFDCNPMVFAAD 276 (379)
Q Consensus 226 ~~i~v~d~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~ 276 (379)
+.|..||..+..-. ...... ...|.++...++|.+.+++.++.+..++..
T Consensus 469 ~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 469 AGVFVIDLASKKVI-HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp TEEEEEESSSSSCC-EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT
T ss_pred CceEEEeCCCCeEE-ecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC
Confidence 56889997765321 111111 356888999999998888776667666543
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.74 E-value=7e-05 Score=63.31 Aligned_cols=233 Identities=12% Similarity=0.078 Sum_probs=135.6
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCce
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEW 88 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~ 88 (379)
.+..+|.+..+++ +|+.+. ...|+..++.+... ...+.. ...+..++|++.++.|+.+. ..+.|..+++.+...
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~--~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEY--TLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 107 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCE--EEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCCCee--EEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCc
Confidence 3455676766644 444443 34688888776532 222333 34578999998777766554 567899999887653
Q ss_pred eeeEEeecCCCceeEEEECCCCC-EEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEE-EeeCC-
Q 016982 89 VPTLVILRLNRAALCVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLA-TTSTD- 165 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d- 165 (379)
.... .........+++.+.+. ++++-...+.|.+.+++... ...+..........++++|.+..|. +-...
T Consensus 108 ~~~~--~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~----~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 108 EEVV--STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp EEEE--CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECTTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred eEEE--eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc----eEEEEeCCCCCcceEEEecCcCeEEEeccCCC
Confidence 2222 22234567889987554 44555557788888876554 2222133445678999999665444 43344
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCceeeee
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLAQNV 243 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~ 243 (379)
+.|..+++. +.....+ ...-.....++++|++..|..+. ..+.|..+|+...... ..+
T Consensus 182 ~~I~r~~~d-------------------G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~-~~~ 241 (349)
T 3v64_C 182 PRIEASSMD-------------------GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK-AVI 241 (349)
T ss_dssp CEEEEEETT-------------------SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE
T ss_pred CEEEEEeCC-------------------CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE-EEE
Confidence 678777752 2222222 12234568999999777666554 5678999998764322 222
Q ss_pred eeecCCeeeEEEecCCcEEEEE-eCCCeEEEE
Q 016982 244 AFRDLPLRDVLFVSEKMVIGVG-FDCNPMVFA 274 (379)
Q Consensus 244 ~~~~~~i~~~~~s~~~~~l~~~-~d~~~~i~~ 274 (379)
.........+++. ++.++.+. ..+.|..++
T Consensus 242 ~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 242 SQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp CSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred eCCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 2223345677773 34444443 333444444
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.73 E-value=2.9e-06 Score=79.61 Aligned_cols=157 Identities=13% Similarity=0.127 Sum_probs=93.8
Q ss_pred ceeEEEeC-CCCcEEEEEec-C----CeEEEEEecCC-ceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-----CeEE
Q 016982 12 CITCHAWS-PDHAMVAFCPN-N----NEVHIYKLIQE-KWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-----RNSY 79 (379)
Q Consensus 12 ~i~~~~~s-~~~~~l~~~~~-d----g~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~ 79 (379)
.+...+|| |||++||.+.. + ..|+++|+.++ +. ....+. .....++|+|||+.|+....+ ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 57789999 99999987644 2 25999999886 41 111111 123468999999888777654 2588
Q ss_pred EEeccCCceeeeEEee-cCCCceeEEEECCCCCEEEEEeC---CCeEEEEEeecCCceeE-EEEEeecCCcCEEEEEEcC
Q 016982 80 VWNQEGSEWVPTLVIL-RLNRAALCVQWSPKENKFAVGSG---AKTVCICYYEQENNWWV-SKLIRKRHDSSVTSVAWHP 154 (379)
Q Consensus 80 vw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~v~i~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~p 154 (379)
++++.+++........ ........+.|+|||++|+..+. ...|.++|+..+... . .+.+..........+.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~-~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH-NTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC-CCEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC-ceeEEeecCCCCceEEEeeee
Confidence 8888776422222212 22334567899999998887663 345777777654211 1 0223133445556666654
Q ss_pred CCcEEEEeeCC--C--eEEEEec
Q 016982 155 NNVFLATTSTD--G--KCRVFST 173 (379)
Q Consensus 155 ~~~~l~~~~~d--~--~i~v~d~ 173 (379)
.+.+++....+ + .|..+++
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEET
T ss_pred CCEEEEEeCCCCCCCcEEEEEcC
Confidence 44444444443 3 4555553
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.72 E-value=6.2e-06 Score=77.41 Aligned_cols=197 Identities=5% Similarity=-0.046 Sum_probs=108.0
Q ss_pred ceEEEEEc-CCCCEEEEEeC-CC----eEEEEeccCC-ceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-----eEE
Q 016982 56 IVSGIDWS-VRSNRIVTVSH-DR----NSYVWNQEGS-EWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK-----TVC 123 (379)
Q Consensus 56 ~v~~~~~~-~~~~~l~~~~~-d~----~i~vw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~ 123 (379)
.+...+|| |||++|+.+.. +| .|+++|+.++ +..... + ......+.|+|||+.|+....+. .|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-V---SGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-E---EEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-c---cCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 67889999 99998876543 22 4999999988 632211 1 12245789999999888877652 466
Q ss_pred EEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC---CCeEEEEeccccccccccccCCCccCCcccce-EEE
Q 016982 124 ICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST---DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ-ILQ 199 (379)
Q Consensus 124 i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 199 (379)
++++.++.... ...+..........+.|+|||++|+..+. ...|.++|+.. ...+. +..
T Consensus 251 ~~~lgt~~~~~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~----------------~~~~~~~~~ 313 (751)
T 2xe4_A 251 RHVMGKLQSED-VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK----------------GNAHNTLEI 313 (751)
T ss_dssp EEETTSCGGGC-EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS----------------CTTCCCEEE
T ss_pred EEECCCCchhc-EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC----------------CCCCceeEE
Confidence 66665543111 11221123345678899999998886553 34577777521 00111 122
Q ss_pred e-ecCCcceEEEEECCCCCEEEEEcCC----CeEEEEECCCCCceeee-eeeecC--CeeeEEEecCCcEEE--EEeCCC
Q 016982 200 L-DLSFSWAFGVKWSPSGNTLAYVGHN----SMIYFVDDVGPSPLAQN-VAFRDL--PLRDVLFVSEKMVIG--VGFDCN 269 (379)
Q Consensus 200 ~-~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~v~d~~~~~~~~~~-~~~~~~--~i~~~~~s~~~~~l~--~~~d~~ 269 (379)
+ ........++.|+.++.+++....+ ..|..+|+.++... +. +..+.. .+..+.+. +..|+ ...++.
T Consensus 314 l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~-~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 314 VRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDW-SHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGL 390 (751)
T ss_dssp SSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCC-CCEEECCCSSEEEEEEEEC--SSEEEEEEEETTE
T ss_pred eecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccc-eeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCE
Confidence 2 2223444556655444444444443 36777787643211 22 222333 34444443 44443 445665
Q ss_pred eEEEEec
Q 016982 270 PMVFAAD 276 (379)
Q Consensus 270 ~~i~~~~ 276 (379)
..++..+
T Consensus 391 ~~l~~~d 397 (751)
T 2xe4_A 391 TRIWTMM 397 (751)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555543
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.71 E-value=2.8e-05 Score=67.76 Aligned_cols=214 Identities=7% Similarity=0.018 Sum_probs=114.6
Q ss_pred ceeEEEeCCC--CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEecc
Q 016982 12 CITCHAWSPD--HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR-----NSYVWNQE 84 (379)
Q Consensus 12 ~i~~~~~s~~--~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~~ 84 (379)
....++|+|+ ...|..+...+.|+.++..++ . +..+.........++++++|+ |+.+...+ .+...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--~-v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--Y-VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT--E-EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC--E-EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 4678999984 344544444488999998776 2 233333445678999999999 54444321 23333433
Q ss_pred CCceeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEE-EEe
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFL-ATT 162 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~~~ 162 (379)
.+. ..... ...-.....++++| ++.++++-..++.|+.++..++.. ....+.......-..++|+|++++| ++-
T Consensus 216 ~~~-~~~~~-~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~--~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 216 SGF-TERLS-LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL--TEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GTT-CCEEE-EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE--EEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCe-ecccc-ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE--EEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 221 11111 11234567789999 666555555677888877765541 0122212222233579999999854 444
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEE-eecCCcceEEEEE---------CCCCCEEEEEcCCCeEEEEE
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ-LDLSFSWAFGVKW---------SPSGNTLAYVGHNSMIYFVD 232 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~---------sp~~~~l~~~~~d~~i~v~d 232 (379)
...+.|+.++.......+.............+..-.. ....-.....+++ .++|.++++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 5577888887521100000000000000000000000 0001123577899 77787777767778899998
Q ss_pred C
Q 016982 233 D 233 (379)
Q Consensus 233 ~ 233 (379)
.
T Consensus 372 ~ 372 (433)
T 4hw6_A 372 P 372 (433)
T ss_dssp T
T ss_pred C
Confidence 4
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=9.3e-05 Score=61.35 Aligned_cols=212 Identities=11% Similarity=0.081 Sum_probs=116.8
Q ss_pred EEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--eE
Q 016982 45 EKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK--TV 122 (379)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v 122 (379)
+.+..+... .....++|+++++++++-..++.|..||..+.. .... .....+..+++.++|+++++..... .|
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHA---TVEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEE---ECSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEE---eCCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 455555433 456789999999866666678899999987642 2222 2345788999999999666554332 35
Q ss_pred EEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec
Q 016982 123 CICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL 202 (379)
Q Consensus 123 ~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (379)
..++..++. +..............++..+++..+++-..++.|.++|............. .... .....
T Consensus 98 ~~~d~~~g~---~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~-------~~~~-~~~~~ 166 (306)
T 2p4o_A 98 VSLVKSDGT---VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHP-------MLAR-SNSES 166 (306)
T ss_dssp EEEECTTSC---EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECG-------GGSC-SSTTC
T ss_pred EEEcCCCCe---EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECC-------cccc-ccccC
Confidence 555555554 222221122223355555555555555556888888885210000000000 0000 00000
Q ss_pred CCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCce--eeeeeeecCCeeeEEEecCCcEEEEEe-CCCeEEEEe
Q 016982 203 SFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSPL--AQNVAFRDLPLRDVLFVSEKMVIGVGF-DCNPMVFAA 275 (379)
Q Consensus 203 ~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~~~i~~~ 275 (379)
.-.....+ +|++++|+.+ ...+.|..||+...... ...+. .......++++++|+++++.. .+.|.+++.
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 11124455 7888766554 56789999998752111 11111 123467899999998777654 456666553
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=0.00021 Score=67.64 Aligned_cols=235 Identities=10% Similarity=-0.001 Sum_probs=142.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEec-----cCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQ-----KHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG 85 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 85 (379)
..|.++...++|.+.+ |+.+ -+.+||..++++....... .....|.++...++|.+ ..|+..+-|.+++..+
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKL-WIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEE-EEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCE-EEEeCCCCeEEECCCC
Confidence 4688998888887655 4444 6889998776333221111 12356899998888754 4455545588899877
Q ss_pred CceeeeEE-------e-----ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEe---------ecCC
Q 016982 86 SEWVPTLV-------I-----LRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIR---------KRHD 144 (379)
Q Consensus 86 ~~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~---------~~~~ 144 (379)
+....... . .-....|.++...++|. |.+|+.++-|..++..... ...+. .-..
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~----~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPT----FHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCS----CEEEC----CCCSSCCSS
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCc----ceeeccCccccccCCCCC
Confidence 65322211 0 01235688998888876 5566666678777765543 11110 1123
Q ss_pred cCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe----ecCCcceEEEEECCCCCEEE
Q 016982 145 SSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL----DLSFSWAFGVKWSPSGNTLA 220 (379)
Q Consensus 145 ~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~ 220 (379)
..|.++...+++++. .|+.++-+..||.. +. ....+ ......|.++...++|.+.+
T Consensus 363 ~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~------------------~~-~~~~~~~~~~~~~~~v~~i~~d~~g~lWi 422 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLW-IGTDGGGINVFENG------------------KR-VAIYNKENRELLSNSVLCSLKDSEGNLWF 422 (781)
T ss_dssp SCEEEEEECTTSCEE-EEEBSSCEEEEETT------------------EE-EEECC-----CCCSBEEEEEECTTSCEEE
T ss_pred cceEEEEEcCCCCEE-EEeCCCcEEEEECC------------------CC-eEEEccCCCCCCCcceEEEEECCCCCEEE
Confidence 568999888777644 55656668888852 11 11111 12245689999888887655
Q ss_pred EEcCCCeEEEEECCCCCceeeeee---eecCCeeeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 221 YVGHNSMIYFVDDVGPSPLAQNVA---FRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 221 ~~~~d~~i~v~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
|..++.+..+|..+++ . ..+. .....|.++...++|.+.++.. +.+..++...
T Consensus 423 -gt~~~Gl~~~~~~~~~-~-~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~ 478 (781)
T 3v9f_A 423 -GTYLGNISYYNTRLKK-F-QIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLAS 478 (781)
T ss_dssp -EETTEEEEEECSSSCE-E-EECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSS
T ss_pred -EeccCCEEEEcCCCCc-E-EEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCC
Confidence 5666778899876543 1 2222 1245688888888888877665 6677776543
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.65 E-value=0.0001 Score=63.25 Aligned_cols=231 Identities=12% Similarity=0.085 Sum_probs=132.4
Q ss_pred ceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCceee
Q 016982 12 CITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~ 90 (379)
.-+|.+..+. .+|+.+. ...|+.+++.+..... .+. ....+..++|++.+..|+.+. ..+.|..+++.+.....
T Consensus 78 ~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~--~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 78 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTL--LLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp SSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEE--EEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE
T ss_pred CCeECCcccc-ceeEeec-CccceeeccCCCcEEE--Eec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE
Confidence 3445555553 3444443 3578888887653322 223 234578999998776666554 56789999988765322
Q ss_pred eEEeecCCCceeEEEECCCCCEE-EEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee-CC-Ce
Q 016982 91 TLVILRLNRAALCVQWSPKENKF-AVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS-TD-GK 167 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d-~~ 167 (379)
.. .........+++.+.+..| ++-...+.|.+.+++.... ...+ .........++++|.+..|.... .. +.
T Consensus 153 ~~--~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~-~~~l~~P~giavdp~~g~ly~td~~~~~~ 226 (386)
T 3v65_B 153 VV--STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPR 226 (386)
T ss_dssp EE--CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEE-CSSCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred EE--eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEee-cCCCCCCcEEEEEcCCCeEEEeccCCCCE
Confidence 22 2223455778888755544 4445567788777654431 2222 33345678999998765555443 33 67
Q ss_pred EEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCceeeeeee
Q 016982 168 CRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSPLAQNVAF 245 (379)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~ 245 (379)
|..+++. +.....+ ...-.....|+++|++..|+.+ ...+.|..+|+...... ..+..
T Consensus 227 I~r~~~d-------------------G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~~ 286 (386)
T 3v65_B 227 IEASSMD-------------------GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK-AVISQ 286 (386)
T ss_dssp EEEEETT-------------------SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE-EEECS
T ss_pred EEEEeCC-------------------CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE-EEEEC
Confidence 7777752 2222222 2223457899999877666655 45678999998754322 22222
Q ss_pred ecCCeeeEEEecCCcEEEEE-eCCCeEEEE
Q 016982 246 RDLPLRDVLFVSEKMVIGVG-FDCNPMVFA 274 (379)
Q Consensus 246 ~~~~i~~~~~s~~~~~l~~~-~d~~~~i~~ 274 (379)
.......+++. .+.++.+. ..+.|..++
T Consensus 287 ~~~~P~giav~-~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 287 GLPHPFAITVF-EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEEE-CCEEEEeeCCCCeEEEEE
Confidence 23345677773 34444443 334454444
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.64 E-value=5e-05 Score=63.64 Aligned_cols=230 Identities=10% Similarity=0.073 Sum_probs=129.6
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEec-CCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC-c
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLI-QEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS-E 87 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-~ 87 (379)
...+.++.|++ +..+++ +..+.|+. ..+ ...++.+.....+...+..+.+.+++..++.+ .++.|..- .+.+ .
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSS
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCC
Confidence 34688999986 454554 45665443 222 22355543332334557788887777655554 45644321 2223 3
Q ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeec-CCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCC
Q 016982 88 WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQ-ENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG 166 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 166 (379)
+.... ......+..+.+.+++.+++++. ++.+..-+ +. +..|.... ......+..+.+.++++.++ .+.+|
T Consensus 154 W~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~-d~gG~tW~~~~---~~~~~~~~~~~~~~~g~~~~-~~~~G 225 (327)
T 2xbg_A 154 WQALV--QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTW-EPGQTAWEPHN---RTTSRRLHNMGFTPDGRLWM-IVNGG 225 (327)
T ss_dssp EEEEE--CSCCCCEEEEEECTTSCEEEEET-TSSEEEEE-CTTCSSCEEEE---CCSSSCEEEEEECTTSCEEE-EETTT
T ss_pred CEEee--cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEe-CCCCCceeECC---CCCCCccceeEECCCCCEEE-EeCCc
Confidence 33322 34456788999999888776664 45543321 22 34333221 34556788999999887665 45577
Q ss_pred eEEEEeccccccccccccCCCccCCcccceEEEee----cCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeee
Q 016982 167 KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD----LSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242 (379)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 242 (379)
.+++.+. ..++....+. .....+..+++.|++..++++. ++.+ ++....+.. -..
T Consensus 226 ~~~~s~~------------------D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~t-W~~ 284 (327)
T 2xbg_A 226 KIAFSDP------------------DNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQT-WQQ 284 (327)
T ss_dssp EEEEEET------------------TEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSS-CEE
T ss_pred eEEEecC------------------CCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcc-cEE
Confidence 7776631 0011111111 1123478899998888777654 6666 344344432 232
Q ss_pred eee---ecCCeeeEEEecCCcEEEEEeCCCeEEE
Q 016982 243 VAF---RDLPLRDVLFVSEKMVIGVGFDCNPMVF 273 (379)
Q Consensus 243 ~~~---~~~~i~~~~~s~~~~~l~~~~d~~~~i~ 273 (379)
+.. ....+.++.|.+++.+++++.++.+.-+
T Consensus 285 ~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 285 DVDVKKVPSNFYKILFFSPDQGFILGQKGILLRY 318 (327)
T ss_dssp CGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEE
T ss_pred cCccCCCCCCeEEEEEECCCceEEEcCCceEEEE
Confidence 321 2346788999888888888888865433
No 271
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.63 E-value=5.6e-05 Score=63.96 Aligned_cols=249 Identities=11% Similarity=0.039 Sum_probs=128.0
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEec---cCCCceEEEEEcCC---CCEEEEEeC----C----C
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQ---KHDQIVSGIDWSVR---SNRIVTVSH----D----R 76 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~ 76 (379)
.....++|.|+|+++++ ..+|.|++++ .+++ +.+..+. ........|+++|+ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45788999999985555 5669999997 3442 3333322 12345789999997 445544432 2 5
Q ss_pred eEEEEeccCC--ce---eeeEE-ee-cCCCceeEEEECCCCCEEEEEeCC-------------CeEEEEEeecCC----c
Q 016982 77 NSYVWNQEGS--EW---VPTLV-IL-RLNRAALCVQWSPKENKFAVGSGA-------------KTVCICYYEQEN----N 132 (379)
Q Consensus 77 ~i~vw~~~~~--~~---~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~d-------------~~v~i~~~~~~~----~ 132 (379)
.|..|+.... .. ...+. .. ........+.|.|||.++++.+.. |.|.-++.+..- .
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777777654 11 11111 11 111234679999999876664421 334333322110 0
Q ss_pred eeEEEEEeecCCcCEEEEEEcC-CCcEEEEeeCCC---eEEEEeccccccccccccCCC-ccCCcccceEEEeecCCcce
Q 016982 133 WWVSKLIRKRHDSSVTSVAWHP-NNVFLATTSTDG---KCRVFSTFIKGVDIKEKKEGT-SSDTKFGEQILQLDLSFSWA 207 (379)
Q Consensus 133 ~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v 207 (379)
....+.+..++.. ...++|+| +++++++-.... .|.+... ....-.+.... ........++..+.......
T Consensus 186 f~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~---G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 186 FPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILK---GGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp STTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECT---TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecC---CCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 0001222234443 35799999 566555433222 2333211 00000000000 00000112233331123456
Q ss_pred EEEEEC-------CCCCEEEEEcCCCeEEEEECCCCCcee--eee-eeecCCeeeEEEecCCcEEEEEe
Q 016982 208 FGVKWS-------PSGNTLAYVGHNSMIYFVDDVGPSPLA--QNV-AFRDLPLRDVLFVSEKMVIGVGF 266 (379)
Q Consensus 208 ~~~~~s-------p~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~-~~~~~~i~~~~~s~~~~~l~~~~ 266 (379)
..++|. .+|.++++.-..+.|...++....... ..+ ......+..+++.|||.++++..
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 788884 467777766677889888877542221 122 12235688999999998777654
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.62 E-value=3.1e-06 Score=78.23 Aligned_cols=230 Identities=10% Similarity=0.009 Sum_probs=127.4
Q ss_pred EEEeCCCCcEEEEEec-CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CC-----CeEEEEeccCCc
Q 016982 15 CHAWSPDHAMVAFCPN-NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HD-----RNSYVWNQEGSE 87 (379)
Q Consensus 15 ~~~~s~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~vw~~~~~~ 87 (379)
++++.++++++++|+. +..+.+||..+++|..+..+..... -.+++..++++.++.|+ .+ ..+.+||..+++
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 4677789999999984 4589999999987776655443222 23556667899888888 34 469999999887
Q ss_pred eeeeEEe--ecCCCceeEEEECCCCCEEEEEeCCC---------eEEEEEeecCCceeEEEEEeec------CCcCEEEE
Q 016982 88 WVPTLVI--LRLNRAALCVQWSPKENKFAVGSGAK---------TVCICYYEQENNWWVSKLIRKR------HDSSVTSV 150 (379)
Q Consensus 88 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~---------~v~i~~~~~~~~~~~~~~~~~~------~~~~v~~~ 150 (379)
+...-.. ......-....+..++..++.++.++ .+..||..+..-+...... .. ....-.++
T Consensus 326 W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~-~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR-QSNRGVAPDAMCGNAV 404 (656)
T ss_dssp EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEEC-EETTEECCCCBTCEEE
T ss_pred ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcc-ccccccCCCCCCCceE
Confidence 5442000 00000000112334556666665443 4567777665422111111 11 01122444
Q ss_pred EEcC-CCcEEEEeeCCC-----------eEEEEeccccccccccccCCCccCCcccceEEEe--ecCCc-ceEEEEECCC
Q 016982 151 AWHP-NNVFLATTSTDG-----------KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL--DLSFS-WAFGVKWSPS 215 (379)
Q Consensus 151 ~~~p-~~~~l~~~~~d~-----------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~v~~~~~sp~ 215 (379)
.|.. ++++++.|+.++ .+.+||.. +....... ..... .-.+++..|+
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~------------------~~~W~~~~~~~mp~~R~~~~~~~l~~ 466 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG------------------TSPNTVFASNGLYFARTFHTSVVLPD 466 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT------------------SCCEEEECTTCCSSCCBSCEEEECTT
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC------------------CCCeeEEccCCCCCCcccCCeEECCC
Confidence 4443 678888887532 56666642 11211111 11111 1234566789
Q ss_pred CCEEEEEcCC-----------CeEEEEECCCCCceeeeeee---ecCCeeeEEEecCCcEEEEEe
Q 016982 216 GNTLAYVGHN-----------SMIYFVDDVGPSPLAQNVAF---RDLPLRDVLFVSEKMVIGVGF 266 (379)
Q Consensus 216 ~~~l~~~~~d-----------~~i~v~d~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~ 266 (379)
+++++.|+.+ ..+.+||..+.+ ...+.. .........+.++|++++.|.
T Consensus 467 g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 467 GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCEEEECCcccCcCcCCCCcccceEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 9999998754 468899986643 122211 111122345668999888655
No 273
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.60 E-value=0.00013 Score=61.67 Aligned_cols=247 Identities=10% Similarity=0.066 Sum_probs=125.8
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEec---cCCCceEEEEEcCC---CCEEEEEeC-C-----CeE
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQ---KHDQIVSGIDWSVR---SNRIVTVSH-D-----RNS 78 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i 78 (379)
.....++|.|+|+++++ ..+|.|++++ +++...+..+. ........|+|+|+ +..|+.+.. . ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45679999999986655 4669999998 44333333332 12346789999998 555544433 2 568
Q ss_pred EEEeccCCce---eeeEEeec----CCCceeEEEECCCCCEEEEEeCC-------------CeEEEEEeecCC----ce-
Q 016982 79 YVWNQEGSEW---VPTLVILR----LNRAALCVQWSPKENKFAVGSGA-------------KTVCICYYEQEN----NW- 133 (379)
Q Consensus 79 ~vw~~~~~~~---~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-------------~~v~i~~~~~~~----~~- 133 (379)
..++...+.. ...+.... .......++|.|+|.++++.+.. +.|.-++.+..- ..
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 8888765421 11121111 11234689999999766664321 344333332200 00
Q ss_pred ----eEEEEEeecCCcCEEEEEEcC-CCcEEEEeeCCCe--------EEEEeccccccccccccCCC-ccCCcccceEEE
Q 016982 134 ----WVSKLIRKRHDSSVTSVAWHP-NNVFLATTSTDGK--------CRVFSTFIKGVDIKEKKEGT-SSDTKFGEQILQ 199 (379)
Q Consensus 134 ----~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~--------i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 199 (379)
...+.+..++.. ...++|+| +++++++-..... |.+... ....-.+.... ........++..
T Consensus 188 ~~~~~~~~i~a~G~rn-p~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~---G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 188 GRRGARPEVYSLGHRN-PQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP---GGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TCTTSCTTEEEECCSE-ECCCEECTTTCCEEEEEECC------CCCEEEEECT---TCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred CCCCCCccEEEEcCCC-cccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc---CCcCCCCcccCCCCCCCCcCCeEe
Confidence 001122133332 46789999 5665555333222 222211 00000000000 000001123333
Q ss_pred eecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCce-----eeeeeeecCCeeeEEEecCCcEEEEEe
Q 016982 200 LDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPL-----AQNVAFRDLPLRDVLFVSEKMVIGVGF 266 (379)
Q Consensus 200 ~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~~ 266 (379)
+.. ......++| .+|.++++.-..+.|...++...... ...+......+..+++.|||.++++..
T Consensus 264 ~~~-~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 264 WPQ-GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CTT-CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred cCC-CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 322 234567777 46776666666778888876644321 111212235688999999998777553
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.57 E-value=1.4e-05 Score=73.88 Aligned_cols=184 Identities=6% Similarity=-0.021 Sum_probs=106.8
Q ss_pred EEEEcCCCCEEEEEeCCC-------------------eEEEEeccCCceeeeEEeecCC-------CceeEEEECCCCC-
Q 016982 59 GIDWSVRSNRIVTVSHDR-------------------NSYVWNQEGSEWVPTLVILRLN-------RAALCVQWSPKEN- 111 (379)
Q Consensus 59 ~~~~~~~~~~l~~~~~d~-------------------~i~vw~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~- 111 (379)
.+++.|+...++.++.++ .|..+|..+++.+-.+....|. .+.....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 468888888888887665 3999999999866666543232 2222222333565
Q ss_pred --EEEEEeCCCeEEEEEeecCCceeEEE--------EEee-cCCcCE------------------------EEEEEcCCC
Q 016982 112 --KFAVGSGAKTVCICYYEQENNWWVSK--------LIRK-RHDSSV------------------------TSVAWHPNN 156 (379)
Q Consensus 112 --~l~~~~~d~~v~i~~~~~~~~~~~~~--------~~~~-~~~~~v------------------------~~~~~~p~~ 156 (379)
.++.++.+|.++++|..+++.....+ .+ . ....++ ..++++|+.
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~-d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKV-DLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEE-CTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEecccccccccccccc-ccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 68888999999999988877321100 00 0 000000 125677766
Q ss_pred cEEEEee------------------------------------CCCeEEEEeccccccccccccCCCccCCcccceEEEe
Q 016982 157 VFLATTS------------------------------------TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL 200 (379)
Q Consensus 157 ~~l~~~~------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (379)
.++.... .+|.|..||+ .+++.+-+.
T Consensus 393 g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~------------------~tG~~~W~~ 454 (668)
T 1kv9_A 393 GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDP------------------VKQKAAWKV 454 (668)
T ss_dssp TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEET------------------TTTEEEEEE
T ss_pred CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeC------------------CCCcEEEEc
Confidence 5554422 1245666664 455555444
Q ss_pred ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecC-CeeeEEEecCCc-EEE
Q 016982 201 DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDL-PLRDVLFVSEKM-VIG 263 (379)
Q Consensus 201 ~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-~i~~~~~s~~~~-~l~ 263 (379)
.... ......+...+.++++++.|+.+++||..+++.+ ..+..... .-.-+.+..+|+ +++
T Consensus 455 ~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l-~~~~~~~~~~~~p~~~~~~G~~yva 517 (668)
T 1kv9_A 455 PYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL-WQFEAQSGIVAAPMTFELAGRQYVA 517 (668)
T ss_dssp EESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE-EEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhh-eEecCCCCcccCceEEEECCEEEEE
Confidence 3321 2222334446788889999999999999988754 44443221 112345566777 444
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.57 E-value=0.00031 Score=63.68 Aligned_cols=106 Identities=7% Similarity=-0.005 Sum_probs=59.6
Q ss_pred cEEEEEecCCeEEEEEecCCceEEEEEeccCCCc---------eEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEE
Q 016982 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQI---------VSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLV 93 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 93 (379)
..+++++.++.|.-+|..++ +.+..+...... -..+++ .+..++.++.|+.|.-+|..+++.+-...
T Consensus 69 g~vyv~~~~~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTG--KRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEETTTEEEEEESSSC--CEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CEEEEEcCCCCEEEEECCCC--cEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 34555555455999999887 344444322111 012222 25578888899999999999998655544
Q ss_pred eecCCC--cee-EEEECC---CCC-EEEEEeC------CCeEEEEEeecCCc
Q 016982 94 ILRLNR--AAL-CVQWSP---KEN-KFAVGSG------AKTVCICYYEQENN 132 (379)
Q Consensus 94 ~~~~~~--~v~-~~~~~~---~~~-~l~~~~~------d~~v~i~~~~~~~~ 132 (379)
...+.. .+. ...... +++ .+++++. ++.|.-+|..+++.
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 322110 111 111111 233 5556542 68888888887764
No 276
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.56 E-value=2.5e-05 Score=70.66 Aligned_cols=184 Identities=10% Similarity=-0.028 Sum_probs=102.2
Q ss_pred EEEcCCCCEEEEEeCC----------------CeEEEEeccCCceeeeEEeecCCC----ceeE---EEECCCCC---EE
Q 016982 60 IDWSVRSNRIVTVSHD----------------RNSYVWNQEGSEWVPTLVILRLNR----AALC---VQWSPKEN---KF 113 (379)
Q Consensus 60 ~~~~~~~~~l~~~~~d----------------~~i~vw~~~~~~~~~~~~~~~~~~----~v~~---~~~~~~~~---~l 113 (379)
+++.++...++.+..+ +.|..+|..+++.+-.+....|.. .+.. +...++|+ .+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 5566666677666532 359999999998666554332211 1111 22223664 56
Q ss_pred EEEeCCCeEEEEEeecCCceeEEEEEeecC------------CcCE--------------------------EEEEEcCC
Q 016982 114 AVGSGAKTVCICYYEQENNWWVSKLIRKRH------------DSSV--------------------------TSVAWHPN 155 (379)
Q Consensus 114 ~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~------------~~~v--------------------------~~~~~~p~ 155 (379)
+.++.+|.++++|..+++.....+ ... ..++ ..++++|+
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~---~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEK---VDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE---SSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEeCCCcEEEEEECCCCCEEeeec---ccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 778889999999888776322111 111 0111 23577887
Q ss_pred CcEEEEeeC-------------------------------------CCeEEEEeccccccccccccCCCccCCcccceEE
Q 016982 156 NVFLATTST-------------------------------------DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL 198 (379)
Q Consensus 156 ~~~l~~~~~-------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
..++++... ++.+..||+ .+++.+-
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~------------------~tG~~~W 458 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDL------------------TTGKAKW 458 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECT------------------TTCCEEE
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEEC------------------CCCCEEE
Confidence 777766543 245555554 4555544
Q ss_pred EeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeec-CCeeeEEEecCCcEEEEEe
Q 016982 199 QLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRD-LPLRDVLFVSEKMVIGVGF 266 (379)
Q Consensus 199 ~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~ 266 (379)
++... ..+....+...+..++.++.|+.|+.+|..+++.+ ..+.... ..-.-+.+..+|+.+++..
T Consensus 459 ~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l-w~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 459 TKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL-WNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE-EEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE-EEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 44321 11222222234667778899999999999998754 4444222 1112244556777655433
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.56 E-value=0.00018 Score=60.73 Aligned_cols=200 Identities=9% Similarity=-0.009 Sum_probs=117.8
Q ss_pred cceeEEEeCCCCcEEE-EEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEE-EeCCCeEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVT-VSHDRNSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~ 88 (379)
..+.+++|++....|. +-...+.|+.+++.+...+. .+.........+++.+.+..|+. -...+.|.+.+++....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceE--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 3467889987655554 44456889889887753222 22222234568899876655544 44567899999876542
Q ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeC-C-CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-eCC
Q 016982 89 VPTLVILRLNRAALCVQWSPKENKFAVGSG-A-KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT-STD 165 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d 165 (379)
. .+ ....-.....+++.|.+..|+.... . +.|..++++... ...+..........++++|++..|..+ ...
T Consensus 151 ~-~l-~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 151 K-VL-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp E-EE-ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEESCCSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred E-EE-EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC----cEEEEECCCCCcceEEEeCCCCEEEEEECCC
Confidence 2 22 1223356789999996665555543 4 677777665543 222212233456899999866555544 456
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEE-eecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ-LDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
+.|..+|+. +..... +.........+++ ..+.++++-...+.|..++..+++.
T Consensus 225 ~~I~~~~~d-------------------G~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 225 HVIERANLD-------------------GSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp TEEEEEETT-------------------SCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CEEEEEeCC-------------------CCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCc
Confidence 788888862 111111 1222334567777 3444455555677888888555543
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=0.00019 Score=61.54 Aligned_cols=201 Identities=8% Similarity=-0.026 Sum_probs=119.0
Q ss_pred cceeEEEeCCCCcEEE-EEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEE-eCCCeEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV-SHDRNSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~~ 88 (379)
..+..++|++.+..|. +-...+.|+.+++.+.. ....+.........+++.+.+..|+.+ ...+.|.+.++.....
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 4577899997555444 44457889999988763 222222222345678888766555444 4567888888876542
Q ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeC-C-CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEE-EeeCC
Q 016982 89 VPTLVILRLNRAALCVQWSPKENKFAVGSG-A-KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLA-TTSTD 165 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~d 165 (379)
. .+ ....-.....+++.|.+..|+.... . +.|..++++... ...+..........++++|++..|. +-+..
T Consensus 194 ~-~l-~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 194 K-VL-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp E-EE-ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEEEECSSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred E-Ee-ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC----cEEEEECCCCCeeeEEEeCCCCEEEEEECCC
Confidence 2 22 1223356789999997666665544 3 567776665543 2222123344578999998665554 44456
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
+.|..+|+.. ......+.........+++ ..+.++++-...+.|..+|..+++.
T Consensus 268 ~~I~~~d~dG------------------~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 268 HVIERANLDG------------------SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp TEEEEECTTS------------------CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CEEEEEeCCC------------------CeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 7888888621 1111112222334567777 3445555556678888888655543
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.0004 Score=60.80 Aligned_cols=159 Identities=8% Similarity=0.101 Sum_probs=94.9
Q ss_pred ceeEEEeCC-CCcEEEEE-ecCCeEEEEEecCCceEEEEEecc-CCCceEEEEE-------cCCCCEEEEEeCCC-----
Q 016982 12 CITCHAWSP-DHAMVAFC-PNNNEVHIYKLIQEKWEKLHVLQK-HDQIVSGIDW-------SVRSNRIVTVSHDR----- 76 (379)
Q Consensus 12 ~i~~~~~s~-~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~~l~~~~~d~----- 76 (379)
....|+|+| +...|.++ ...+.|++.|++++....+..... .......++| +++++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 34444444 444678889988863333222111 1235789999 99999776666543
Q ss_pred --eEEEEeccC-Ccee-----eeEEeecCCCceeEEEECCC-CCEEEEEeCCCeEEEEEee-------cCCce-----e-
Q 016982 77 --NSYVWNQEG-SEWV-----PTLVILRLNRAALCVQWSPK-ENKFAVGSGAKTVCICYYE-------QENNW-----W- 134 (379)
Q Consensus 77 --~i~vw~~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~-------~~~~~-----~- 134 (379)
.|.+.+... +.+. ..+. . -.....++++|+ +.++++-..++.|..+|+. ++..+ .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~--~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA--A-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE--E-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeec--c-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 255665333 2332 1221 1 234567889995 5555556668889999987 44321 0
Q ss_pred ---EEEEEeecCCcCEEEEEEcCCCcE-EEEeeCCCeEEEEec
Q 016982 135 ---VSKLIRKRHDSSVTSVAWHPNNVF-LATTSTDGKCRVFST 173 (379)
Q Consensus 135 ---~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~d~~i~v~d~ 173 (379)
....+..........++|+|+++. +++-+....|+.++.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 112221223344679999999985 444456778888765
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.48 E-value=0.00011 Score=60.29 Aligned_cols=163 Identities=13% Similarity=0.086 Sum_probs=106.4
Q ss_pred CCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCceeeeEEeec----C--CCceeEEEE---CCCCCEEEEEe------
Q 016982 54 DQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWVPTLVILR----L--NRAALCVQW---SPKENKFAVGS------ 117 (379)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~l~~~~------ 117 (379)
...-.+++|.+....|..++ ..++|..|+...+..... .+.. . ...+..+.| .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 33445789988666666665 789999999986643332 2211 0 124689999 68877777543
Q ss_pred -------CCCeEEEEEee---cCCceeEEEEEe--ec-------CCcCEEEEEEcCCCcEEEEeeCC-CeEEEEeccccc
Q 016982 118 -------GAKTVCICYYE---QENNWWVSKLIR--KR-------HDSSVTSVAWHPNNVFLATTSTD-GKCRVFSTFIKG 177 (379)
Q Consensus 118 -------~d~~v~i~~~~---~~~~~~~~~~~~--~~-------~~~~v~~~~~~p~~~~l~~~~~d-~~i~v~d~~~~~ 177 (379)
.+..|..||+. +++.......-. .+ -......++..++|+..++++.. +.|...+.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p---- 166 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA---- 166 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT----
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC----
Confidence 25778889988 555322111100 01 12358899999999999998888 88777764
Q ss_pred cccccccCCCccCCcccceEEEee------cCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Q 016982 178 VDIKEKKEGTSSDTKFGEQILQLD------LSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGP 236 (379)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~ 236 (379)
.++.+..+. ......+.++++|+|+.|++....+.|..+|+...
T Consensus 167 ---------------dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 167 ---------------DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp ---------------TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred ---------------CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 232222221 11223678999999999988877999999998854
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.47 E-value=0.00038 Score=57.93 Aligned_cols=205 Identities=9% Similarity=-0.081 Sum_probs=119.0
Q ss_pred cceeEEEeCCCCcEEE-EEecCCeEEEEEecCCc--eEEEEEeccCCCceEEEEEcCCCCEEE-EEeCCCeEEEEeccCC
Q 016982 11 QCITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEK--WEKLHVLQKHDQIVSGIDWSVRSNRIV-TVSHDRNSYVWNQEGS 86 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~ 86 (379)
..+.+++|+++++.|. +-..++.|+.+++.+.. ......+...-.....+++.+.+..|+ +-...+.|.+.++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 4567899998665554 44456899999987610 011222322223457889987665554 4456788999998765
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCC--CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-e
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA--KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT-S 163 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~ 163 (379)
...... ...-.....+++.|.+..|+.+... +.|..++++... .+.+....-.....++++|++..|..+ .
T Consensus 110 ~~~~~~--~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~----~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 110 KRKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----IYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp SEEEEE--ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----EEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred ceEEEE--ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----eEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 432222 2233567899999976666555543 577776665433 222212334567899999876655544 4
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
..+.|..+|+.. ...+.+............+++. .+.++++-...+.|..++..+++.
T Consensus 184 ~~~~I~~~d~dg----------------~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 184 KLHSISSIDVNG----------------GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp TTTEEEEEETTS----------------CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred CCCeEEEEecCC----------------CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 567899998621 0111111111112335677775 355555555678899998766553
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.45 E-value=0.00044 Score=57.50 Aligned_cols=222 Identities=17% Similarity=0.100 Sum_probs=127.3
Q ss_pred EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCC---ceeeeEEeecCCC
Q 016982 24 MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGS---EWVPTLVILRLNR 99 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~---~~~~~~~~~~~~~ 99 (379)
+|+.+.. ..|+..++.+.+.. ..+. .......++|++.++.|+.+. .++.|..+++.+. .....+ ....-.
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~--~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYT--SLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQ 77 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCE--EEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCS
T ss_pred EEEEECC-CeEEEEECCCcceE--ehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE-EeCCCC
Confidence 4555544 57899998876332 2333 234578999998776666555 4588999998761 211122 112224
Q ss_pred ceeEEEECCCCCEE-EEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC-C-CeEEEEecccc
Q 016982 100 AALCVQWSPKENKF-AVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST-D-GKCRVFSTFIK 176 (379)
Q Consensus 100 ~v~~~~~~~~~~~l-~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d-~~i~v~d~~~~ 176 (379)
....+++.+.+..| ++-...+.|.+++++... ....+ .........++++|.+..|..... . +.|..+++.
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-- 151 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-- 151 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc---eEEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC--
Confidence 56788998755444 444567889998876544 22222 333456789999996655544443 2 677777752
Q ss_pred ccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCceeeeeee--ecCCeee
Q 016982 177 GVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLAQNVAF--RDLPLRD 252 (379)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~--~~~~i~~ 252 (379)
+.....+ ...-.....++++|++..|+.+. ..+.|..+|+...... ..... .......
T Consensus 152 -----------------G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~-~~~~~~~~~~~P~g 213 (316)
T 1ijq_A 152 -----------------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFS 213 (316)
T ss_dssp -----------------SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECTTTTSSEEE
T ss_pred -----------------CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE-EEeecCCccCCcEE
Confidence 2222222 12234578999999877766654 5679999998754321 12221 1233567
Q ss_pred EEEecCCcEEEEE-eCCCeEEEEe
Q 016982 253 VLFVSEKMVIGVG-FDCNPMVFAA 275 (379)
Q Consensus 253 ~~~s~~~~~l~~~-~d~~~~i~~~ 275 (379)
+++. .+.++.+. ..+.|..++.
T Consensus 214 iav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 214 LAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEET
T ss_pred EEEE-CCEEEEEECCCCeEEEEeC
Confidence 7774 34444443 3344555543
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.42 E-value=0.00051 Score=57.11 Aligned_cols=225 Identities=9% Similarity=0.016 Sum_probs=128.3
Q ss_pred EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCceeeeEEeecCCCcee
Q 016982 24 MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWVPTLVILRLNRAAL 102 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~v~ 102 (379)
+|+.+. ...|+..++.+........+.+ .....+++|.+.++.|+.+. ..+.|..+++.+........ ...-....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~-~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-EECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-cCCCCCcc
Confidence 444443 3578999988652111111221 23567899998766665554 56789999987763212221 22224567
Q ss_pred EEEECCCC-CEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee--CCCeEEEEeccccccc
Q 016982 103 CVQWSPKE-NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS--TDGKCRVFSTFIKGVD 179 (379)
Q Consensus 103 ~~~~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~i~v~d~~~~~~~ 179 (379)
.+++.+.+ +++++-...+.|.+++++... .+.+..........+++.|.+..|.... ..+.|...++.
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~----~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d----- 153 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSL----RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD----- 153 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-----
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCc----EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-----
Confidence 88888744 444554557789888876544 2222134445678999998765555544 35677777752
Q ss_pred cccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCceeeeeeeecCCeeeEEEec
Q 016982 180 IKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVS 257 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~ 257 (379)
+.....+ ...-...+.++++|++..|+.+. ..+.|..+|+...... ............+++..
T Consensus 154 --------------G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 154 --------------GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-AVVKGSLPHPFALTLFE 218 (318)
T ss_dssp --------------SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSCCSCEEEEEEET
T ss_pred --------------CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE-EEecCCCCCceEEEEeC
Confidence 2222222 12234568999999777666654 5678999998754322 22222234456777754
Q ss_pred CCcEEEEEeCCCeEEEEe
Q 016982 258 EKMVIGVGFDCNPMVFAA 275 (379)
Q Consensus 258 ~~~~l~~~~d~~~~i~~~ 275 (379)
++-+++-...+.|..++.
T Consensus 219 ~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 219 DILYWTDWSTHSILACNK 236 (318)
T ss_dssp TEEEEEETTTTEEEEEET
T ss_pred CEEEEEecCCCeEEEEEC
Confidence 322333333445555554
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.42 E-value=8.1e-05 Score=67.45 Aligned_cols=72 Identities=7% Similarity=-0.085 Sum_probs=48.3
Q ss_pred EEEcCCCCEEEEEeCC----------------CeEEEEeccCCceeeeEEeecCCC--------ceeEEEEC-CCC---C
Q 016982 60 IDWSVRSNRIVTVSHD----------------RNSYVWNQEGSEWVPTLVILRLNR--------AALCVQWS-PKE---N 111 (379)
Q Consensus 60 ~~~~~~~~~l~~~~~d----------------~~i~vw~~~~~~~~~~~~~~~~~~--------~v~~~~~~-~~~---~ 111 (379)
+++.++...++.+..+ +.|..+|.++++.+-.+....|.. ++. +... .+| .
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 4566677777777655 379999999998766665443321 111 2222 467 4
Q ss_pred EEEEEeCCCeEEEEEeecCCc
Q 016982 112 KFAVGSGAKTVCICYYEQENN 132 (379)
Q Consensus 112 ~l~~~~~d~~v~i~~~~~~~~ 132 (379)
.++.++.+|.++++|.++++.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCE
T ss_pred EEEEECCCcEEEEEECCCCCE
Confidence 677788999999999888774
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.40 E-value=0.00017 Score=65.31 Aligned_cols=72 Identities=8% Similarity=-0.007 Sum_probs=47.5
Q ss_pred EEEcCCCCEEEEEeC--------------------C----CeEEEEeccCCceeeeEEeecCC--------CceeEEEEC
Q 016982 60 IDWSVRSNRIVTVSH--------------------D----RNSYVWNQEGSEWVPTLVILRLN--------RAALCVQWS 107 (379)
Q Consensus 60 ~~~~~~~~~l~~~~~--------------------d----~~i~vw~~~~~~~~~~~~~~~~~--------~~v~~~~~~ 107 (379)
+++.|+...++.+.. | +.|..+|..+++.+-.+....|. .++. +...
T Consensus 251 ~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~ 329 (582)
T 1flg_A 251 ASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYK 329 (582)
T ss_dssp CEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEE
T ss_pred ceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eeee
Confidence 456677777776653 2 57999999999876665543332 1111 1221
Q ss_pred -CCCC---EEEEEeCCCeEEEEEeecCCc
Q 016982 108 -PKEN---KFAVGSGAKTVCICYYEQENN 132 (379)
Q Consensus 108 -~~~~---~l~~~~~d~~v~i~~~~~~~~ 132 (379)
.+|+ .++.++.+|.++++|..+++.
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCE
Confidence 4664 678889999999999887763
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.38 E-value=0.00084 Score=57.83 Aligned_cols=222 Identities=18% Similarity=0.087 Sum_probs=128.2
Q ss_pred EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCc--eeeeEEeecCCCc
Q 016982 24 MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSE--WVPTLVILRLNRA 100 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~--~~~~~~~~~~~~~ 100 (379)
+|+.+. ...|+..++.......+ +. ....+..++|++.+..|+.+. ..+.|+.+++.... .............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~--~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSL--IP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEE--EC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred eeEEec-cceeEEEccCCcceeEe--cc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 454443 46888888887633332 22 345678999999777776665 56788888887521 0011111223456
Q ss_pred eeEEEECCC-CCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC--CCeEEEEeccccc
Q 016982 101 ALCVQWSPK-ENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST--DGKCRVFSTFIKG 177 (379)
Q Consensus 101 v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d~~i~v~d~~~~~ 177 (379)
...+++.+. ++++++-...+.|.+.+++... ....+ .........++++|.+..|..... .+.|...++.
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~---~~~l~-~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--- 233 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--- 233 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCS---EEEEE-ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT---
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCc---eEEEE-eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC---
Confidence 788999884 4445555557888887776554 22233 334456789999996655554442 3677777752
Q ss_pred cccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCceeeeeee--ecCCeeeE
Q 016982 178 VDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLAQNVAF--RDLPLRDV 253 (379)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~--~~~~i~~~ 253 (379)
+.....+ ...-.....|+++|++..|+.+. ..+.|..+|+...... ..... ......++
T Consensus 234 ----------------G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~l~~P~gl 296 (400)
T 3p5b_L 234 ----------------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSL 296 (400)
T ss_dssp ----------------SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCE-EEEECSSTTSSEEEE
T ss_pred ----------------CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccE-EEEeCCCCCCCCEEE
Confidence 2222222 22234578999999877777664 5678999998764422 22221 12234566
Q ss_pred EEecCCcEEE-EEeCCCeEEEE
Q 016982 254 LFVSEKMVIG-VGFDCNPMVFA 274 (379)
Q Consensus 254 ~~s~~~~~l~-~~~d~~~~i~~ 274 (379)
++.. +.++. -...+.|..++
T Consensus 297 ~v~~-~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 297 AVFE-DKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEET-TEEEEEESSSCSEEEEE
T ss_pred EEeC-CEEEEecCCCCeEEEEE
Confidence 6633 33333 33344555555
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00093 Score=58.16 Aligned_cols=153 Identities=13% Similarity=0.167 Sum_probs=94.6
Q ss_pred eEEEEEcC-CCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeC-CC----eEEEEEeecC
Q 016982 57 VSGIDWSV-RSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG-AK----TVCICYYEQE 130 (379)
Q Consensus 57 v~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~v~i~~~~~~ 130 (379)
...|+++| ++..|+.+...+.|+.+|+.++..... .........++|+++++.|+++.. ++ .+..++ ..+
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV---YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RES 214 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE---ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE---ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCC
Confidence 46889998 455666666557899999987763332 224456889999999996666654 22 233333 222
Q ss_pred CceeEEEEEeecCCcCEEEEEEcC-CCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccce--EEEeecCCcce
Q 016982 131 NNWWVSKLIRKRHDSSVTSVAWHP-NNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQ--ILQLDLSFSWA 207 (379)
Q Consensus 131 ~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v 207 (379)
... ....+ . .......++++| ++.++++-..++.|..++. ..... +..... ....
T Consensus 215 ~~~-~~~~l-~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~------------------~~~~~~~~~~~~~-~~~P 272 (430)
T 3tc9_A 215 GFK-VITEL-T-KGQNCNGAETHPINGELYFNSWNAGQVFRYDF------------------TTQETTPLFTIQD-SGWE 272 (430)
T ss_dssp TSC-SEEEE-E-ECSSCCCEEECTTTCCEEEEETTTTEEEEEET------------------TTTEEEEEEECSS-SSCC
T ss_pred cee-eeeee-c-cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC------------------CCCcEEEEEEcCC-CCcc
Confidence 211 01222 1 123456788999 6777777667888999986 22221 111111 2346
Q ss_pred EEEEECCCCCEEEE-EcCCCeEEEEECCC
Q 016982 208 FGVKWSPSGNTLAY-VGHNSMIYFVDDVG 235 (379)
Q Consensus 208 ~~~~~sp~~~~l~~-~~~d~~i~v~d~~~ 235 (379)
..++|+|+|++|+. -...+.|..++...
T Consensus 273 ~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 273 FHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred eeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 78999999995544 45678899987653
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.36 E-value=0.00072 Score=56.19 Aligned_cols=200 Identities=9% Similarity=-0.064 Sum_probs=116.6
Q ss_pred ceeEEEeCCCCc-EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEE-EEeCCCeEEEEeccCCcee
Q 016982 12 CITCHAWSPDHA-MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIV-TVSHDRNSYVWNQEGSEWV 89 (379)
Q Consensus 12 ~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~ 89 (379)
.+.+++|++.+. ++.+-...+.|+.+++.+..... ..+...-.....+++.+.+..|+ +-...+.|.+++++.....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 456788887544 44444456788888877652111 11111223456788887555554 4445678999998765422
Q ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-eCCC
Q 016982 90 PTLVILRLNRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT-STDG 166 (379)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d~ 166 (379)
.+ ....-.....+++.|.+..|+.+.. .+.|...+++... ...+....-.....++++|++..|..+ +..+
T Consensus 115 -~l-~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~ 188 (318)
T 3sov_A 115 -VL-FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----RFIIINSEIYWPNGLTLDYEEQKLYWADAKLN 188 (318)
T ss_dssp -EE-ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS----CEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred -EE-EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC----eEEEEECCCCCccEEEEeccCCEEEEEECCCC
Confidence 22 1233456789999987666666553 4677776665433 222212333456899999976555544 4567
Q ss_pred eEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 167 KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
.|..+|+. +.....+ .........+++.. +.++.+-...+.|..++..+++.
T Consensus 189 ~I~~~d~d-------------------G~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 189 FIHKSNLD-------------------GTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEEETT-------------------SCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEEEcCC-------------------CCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 88888862 1111111 22233456777753 34444555678899999866654
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.36 E-value=0.00098 Score=57.41 Aligned_cols=206 Identities=9% Similarity=-0.060 Sum_probs=119.2
Q ss_pred CcceeEEEeCCCCcEEEEE-ecCCeEEEEEecCCc--eEEEEEeccCCCceEEEEEcCCCCEEEEE-eCCCeEEEEeccC
Q 016982 10 AQCITCHAWSPDHAMVAFC-PNNNEVHIYKLIQEK--WEKLHVLQKHDQIVSGIDWSVRSNRIVTV-SHDRNSYVWNQEG 85 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~-~~dg~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~~ 85 (379)
...+.+++|++.+..|... ...+.|+.+++.... ......+.........+++.+.+..|+.+ ...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4567889999865555444 456788888886521 01222233234456789998855555444 4567899999887
Q ss_pred CceeeeEEeecCCCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT- 162 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~- 162 (379)
......+ ...-.....+++.|.+..|+.... .+.|...+++.... ...+ ...-.....++++|++..|..+
T Consensus 191 ~~~~~l~--~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~---~~~~-~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 191 VKRKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLV-TENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp CSEEEEE--ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---EEEE-CSSCSCEEEEEEETTTTEEEEEE
T ss_pred CceEEEE--eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---EEEE-ECCCCceEEEEEEeCCCEEEEEE
Confidence 6533322 223345789999997666666543 36777777665441 2222 3333567899999877666555
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCc
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSP 238 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~ 238 (379)
...+.|..+|+.. .....+............+++. .+.++.+-...+.|..+|..+++.
T Consensus 265 ~~~~~I~~~d~dG----------------~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 265 SKLHSISSIDVNG----------------GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp TTTTEEEEEETTS----------------CCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCC
T ss_pred CCCCEEEEEeCCC----------------CccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCc
Confidence 4567888888621 1111111111112334566663 333444555667788888666553
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.36 E-value=0.00017 Score=59.20 Aligned_cols=163 Identities=9% Similarity=0.078 Sum_probs=107.4
Q ss_pred eccCcceeEEEeCCCCcEEEEEe-cCCeEEEEEecCCceEEEEEeccC----C--CceEEEEE---cCCCCEEEEEe---
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCP-NNNEVHIYKLIQEKWEKLHVLQKH----D--QIVSGIDW---SVRSNRIVTVS--- 73 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~----~--~~v~~~~~---~~~~~~l~~~~--- 73 (379)
....--..+++|.+....|..++ ..+.|..|+...+....+ .+.+- . ..+..|.| .|+++++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 33444566889988666665555 689999999986543444 44431 1 14579999 68877776543
Q ss_pred ----------CCCeEEEEecc---CCceeeeEEeecC-----------CCceeEEEECCCCCEEEEEeCC-CeEEEEEee
Q 016982 74 ----------HDRNSYVWNQE---GSEWVPTLVILRL-----------NRAALCVQWSPKENKFAVGSGA-KTVCICYYE 128 (379)
Q Consensus 74 ----------~d~~i~vw~~~---~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~d-~~v~i~~~~ 128 (379)
.+..|..+|+. +++......+... ...+..++..++|+..++++.. +.|..++.+
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 25779999999 6765444433221 1357899999999999988877 776554443
Q ss_pred cCCceeEEEEEee----cCCcCEEEEEEcCCCcEEEEeeCCCeEEEEec
Q 016982 129 QENNWWVSKLIRK----RHDSSVTSVAWHPNNVFLATTSTDGKCRVFST 173 (379)
Q Consensus 129 ~~~~~~~~~~~~~----~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~ 173 (379)
... ....... ......+.|+++|+++.|++....+.+..+|+
T Consensus 168 G~~---~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 168 GKT---VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp SCC---EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred CCE---EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 332 1111101 11223668999999988888777999999987
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.32 E-value=0.0002 Score=62.34 Aligned_cols=202 Identities=9% Similarity=0.060 Sum_probs=113.2
Q ss_pred CcceeEEEeCCCCcEEEEEecC---C-eEEEEEecCCceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEecc
Q 016982 10 AQCITCHAWSPDHAMVAFCPNN---N-EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQE 84 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~d---g-~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 84 (379)
.....+++++++|+++++.... . .+..++...+ +.....+. .......++++| ++.+.++-..++.|+.++..
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~-~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG-FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT-TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC-eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 3457899999999954443311 1 2333333322 11111121 123346788999 66655555567889999988
Q ss_pred CCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCeEEEEEeecCCc-eeEEEEEeec---------------CCcCE
Q 016982 85 GSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GAKTVCICYYEQENN-WWVSKLIRKR---------------HDSSV 147 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~-~~~~~~~~~~---------------~~~~v 147 (379)
++.....+...........++|+|+++.|.++. ..+.|..++++.... ......+ .+ .-...
T Consensus 259 ~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~-ag~~g~~g~~dg~~~~a~~~~P 337 (433)
T 4hw6_A 259 TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIV-CGQHSSPGWVDGMGTGARLWGP 337 (433)
T ss_dssp TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEE-EECTTCCCCBCEEGGGSBCSSE
T ss_pred CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEE-EecCCCCccCCCcccceEEcCC
Confidence 776422222122223335799999999555554 467888887763211 0000111 11 11235
Q ss_pred EEEEE---------cCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec----------------
Q 016982 148 TSVAW---------HPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL---------------- 202 (379)
Q Consensus 148 ~~~~~---------~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 202 (379)
..+++ .++++++++-...+.|+.++.. + .+.++.+
T Consensus 338 ~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-------------------G-~v~t~~G~g~~~~~G~~dG~~~~ 397 (433)
T 4hw6_A 338 NQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-------------------G-RVTTYAGRGNSREWGYVDGELRS 397 (433)
T ss_dssp EEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-------------------S-EEEEEECCCTTCSSCCBCEETTT
T ss_pred ccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-------------------C-CEEEEEeCCCCCccccCCCcccc
Confidence 67888 6777777777777889888742 2 1111111
Q ss_pred --CCcceEEEEEC-CCCCEEEEEcCCCeEEEEECC
Q 016982 203 --SFSWAFGVKWS-PSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 203 --~~~~v~~~~~s-p~~~~l~~~~~d~~i~v~d~~ 234 (379)
.-.....++++ ++|.++++=.....|+.++++
T Consensus 398 ~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 398 QALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 01236788888 566655555566778877653
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.23 E-value=0.0015 Score=54.19 Aligned_cols=203 Identities=12% Similarity=0.066 Sum_probs=119.4
Q ss_pred CcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC----CCE--E-EEEe-C--CCeEEEEecc--CCcee
Q 016982 22 HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR----SNR--I-VTVS-H--DRNSYVWNQE--GSEWV 89 (379)
Q Consensus 22 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l-~~~~-~--d~~i~vw~~~--~~~~~ 89 (379)
..+++.....+-+.+||+.. +.+..+.. +.++.+..-|+ |+. | ++.. . +++|.+|++. ++.+.
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G---~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDG---KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEETTS---CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred ccEEEEEcCCCCEEEEcCCC---cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 34555555678999999954 46666653 45666666552 322 3 3333 3 5789999774 44321
Q ss_pred eeEEe---ecCC-CceeEEEE--CCC-CC-EEEEEeCCCeEEEEEeecCC----ceeEEEEEeecCCcCEEEEEEcCCCc
Q 016982 90 PTLVI---LRLN-RAALCVQW--SPK-EN-KFAVGSGAKTVCICYYEQEN----NWWVSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 90 ~~~~~---~~~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~i~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
..-.. .... ..+..+++ +|. +. ++++...+|.+..|++.... ...+.+.+ ...+.+..+...+...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f--~lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF--KMNSQTEGMAADDEYG 192 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE--ECSSCEEEEEEETTTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe--cCCCCcceEEEcCCCC
Confidence 11000 0012 56677787 774 44 67778889999999885421 11234444 3456788999998888
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEee-cC-CcceEEEEE--CCCCC-EEEEEc-CCCeEEEE
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD-LS-FSWAFGVKW--SPSGN-TLAYVG-HNSMIYFV 231 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~--sp~~~-~l~~~~-~d~~i~v~ 231 (379)
.|..+-++..|..++.. ... ..+.+.+..+. .+ ...+..|++ .++++ +|++++ .+.+..+|
T Consensus 193 ~Lyv~eEd~GIw~~da~-------p~~------~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAE-------PDG------GSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp EEEEEETTTEEEEEECS-------TTS------CSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred eEEEecccceEEEEeCC-------cCC------CCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 89999888665555431 000 01234444442 11 235778887 45655 666555 67799999
Q ss_pred ECCCCCceeeeee
Q 016982 232 DDVGPSPLAQNVA 244 (379)
Q Consensus 232 d~~~~~~~~~~~~ 244 (379)
|.....+.+..+.
T Consensus 260 dr~~~~~~vg~f~ 272 (355)
T 3amr_A 260 DRQGKNKYVADFR 272 (355)
T ss_dssp ESSTTCCEEEEEE
T ss_pred ECCCCCcEEEEEE
Confidence 9874444445543
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.21 E-value=0.0039 Score=58.44 Aligned_cols=187 Identities=19% Similarity=0.133 Sum_probs=112.2
Q ss_pred EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCce--eeeEEeecCCCc
Q 016982 24 MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEW--VPTLVILRLNRA 100 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~--~~~~~~~~~~~~ 100 (379)
+|+.+. ...|+..++....... .+. ....+..|+|.+....|+.+. ..+.|+.+++..... .....+...-..
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~--l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTS--LIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEE--EEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred cccccc-ccceeEeeccCCccee--eec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 444443 3567887877653322 222 345678999998666665554 557788888875321 111122223456
Q ss_pred eeEEEECCCCCEEEE-EeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC--CCeEEEEeccccc
Q 016982 101 ALCVQWSPKENKFAV-GSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST--DGKCRVFSTFIKG 177 (379)
Q Consensus 101 v~~~~~~~~~~~l~~-~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d~~i~v~d~~~~~ 177 (379)
...|++.+.+..|+. -...+.|.+.+++... .+.+..........|++.|.+.+|+.... .+.|...++.
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~----~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--- 545 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--- 545 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSS----EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT---
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCe----EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC---
Confidence 678999887755554 4557889888877654 22331344456789999997655555442 3677777752
Q ss_pred cccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCC
Q 016982 178 VDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPS 237 (379)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~ 237 (379)
+.....+ ...-.....|++++.+..|+.+. ....|..+++....
T Consensus 546 ----------------G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 546 ----------------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp ----------------SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ----------------CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 2222222 22235678999998777776664 55789999987654
No 294
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.19 E-value=0.0019 Score=53.91 Aligned_cols=252 Identities=10% Similarity=0.036 Sum_probs=129.8
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEec----cCCCceEEEEEcCC---CCEEEEE---eCCCeEE
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQ----KHDQIVSGIDWSVR---SNRIVTV---SHDRNSY 79 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~ 79 (379)
-...+.++|.|+|+++++-...|.|++++..++....+..+. ........|+++|+ +..|... ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 456789999999998777654899999986655434444332 22456789999996 3444432 2345566
Q ss_pred EEeccCC-----c---eeeeEEeec--CCCceeEEEECCCCCEEEEEeC-------------CCeEEEEEeecCCc----
Q 016982 80 VWNQEGS-----E---WVPTLVILR--LNRAALCVQWSPKENKFAVGSG-------------AKTVCICYYEQENN---- 132 (379)
Q Consensus 80 vw~~~~~-----~---~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-------------d~~v~i~~~~~~~~---- 132 (379)
-|.+..+ . ....+.... .......+.|.|||.++++.+. .|.| +.++....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I--lRi~~dG~ip~~ 188 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKI--LRMTPDGEPAPG 188 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCE--EEECTTSSBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEE--EEEeCCCCccCC
Confidence 6666542 1 111121111 1123467999999987777542 2333 33332211
Q ss_pred --eeEEEEEeecCCcCEEEEEEcCCCcEEEEee-CCCeEEEEeccccccccccccCCC-ccCCcccceEEEeecCCcceE
Q 016982 133 --WWVSKLIRKRHDSSVTSVAWHPNNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGT-SSDTKFGEQILQLDLSFSWAF 208 (379)
Q Consensus 133 --~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~ 208 (379)
..-.+.+..+|.. ...++|+|++.++++-. .++.-.|--+. .....-.+.... ........++..+..+.....
T Consensus 189 nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 189 NPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp CSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 0001223245554 45789999887665532 23322222211 000100000000 000011223444433333566
Q ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCc---eeeeeeeecCCeeeEEEecCCcEEEEEe
Q 016982 209 GVKWSPSGNTLAYVGHNSMIYFVDDVGPSP---LAQNVAFRDLPLRDVLFVSEKMVIGVGF 266 (379)
Q Consensus 209 ~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 266 (379)
.++|. +|..++..-..+.|....+..... ....+......+..++..|||.++++..
T Consensus 267 G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 77776 355555554556666666654321 1122333345788999999998777543
No 295
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.09 E-value=0.0035 Score=52.96 Aligned_cols=259 Identities=10% Similarity=-0.003 Sum_probs=127.1
Q ss_pred cceeEEEeCCCCc-EEEEEecCCeEEEEEecCCceEEEEEe----ccCCCceEEEEEcCC---CCEEEEEe-C-------
Q 016982 11 QCITCHAWSPDHA-MVAFCPNNNEVHIYKLIQEKWEKLHVL----QKHDQIVSGIDWSVR---SNRIVTVS-H------- 74 (379)
Q Consensus 11 ~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~------- 74 (379)
.....++|.|+|+ +++ +...|.|++++......+.+..+ .........++++|+ +..|..+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 4568999999999 555 45679999998533100011111 112345689999996 44554432 2
Q ss_pred CCeEEEEeccCC--cee--e-eEEeec----CCCceeEEEECCCCCEEEEEeCC-------------CeEEEEEeecCCc
Q 016982 75 DRNSYVWNQEGS--EWV--P-TLVILR----LNRAALCVQWSPKENKFAVGSGA-------------KTVCICYYEQENN 132 (379)
Q Consensus 75 d~~i~vw~~~~~--~~~--~-~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-------------~~v~i~~~~~~~~ 132 (379)
...|..+++... ... . .+.... .......+.|.|||.++++.+.. |.|.-++.+..-.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666666533 111 1 111111 11124679999999665554332 3444444332100
Q ss_pred ----e-----eEEEEEeecCCcCEEEEEEcC-CCcEEEEeeC-CCeEEEEeccccccccc----cc-----cCCCc----
Q 016982 133 ----W-----WVSKLIRKRHDSSVTSVAWHP-NNVFLATTST-DGKCRVFSTFIKGVDIK----EK-----KEGTS---- 188 (379)
Q Consensus 133 ----~-----~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~-d~~i~v~d~~~~~~~~~----~~-----~~~~~---- 188 (379)
. ...+.+..++. ....++|+| +++++++-.. ++.=.|.-+.. ....- .. .....
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCCCCCccCcccC
Confidence 0 00122213443 357899999 5655554221 21112221110 00000 00 00000
Q ss_pred -cCCcccceEEEeecCCcceEEEEECC-------CCCEEEEEcCCCeEEEEECCCCCceeee---eeeecCCeeeEEEec
Q 016982 189 -SDTKFGEQILQLDLSFSWAFGVKWSP-------SGNTLAYVGHNSMIYFVDDVGPSPLAQN---VAFRDLPLRDVLFVS 257 (379)
Q Consensus 189 -~~~~~~~~~~~~~~~~~~v~~~~~sp-------~~~~l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~~i~~~~~s~ 257 (379)
.......++..+..| ..+..++|.+ +|.++++.-..+.|...++..+. .... +......+..+++.|
T Consensus 255 ~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDK-VTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp SSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTE-EEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCe-EeeeEEcccCCCCceeEEEECC
Confidence 000111223333333 3567788864 46777766677888888876542 2111 112234688999999
Q ss_pred CCcEEEEEeCCCeEEEE
Q 016982 258 EKMVIGVGFDCNPMVFA 274 (379)
Q Consensus 258 ~~~~l~~~~d~~~~i~~ 274 (379)
||.++++..+..=+||.
T Consensus 333 dG~lyv~td~~~g~I~r 349 (353)
T 2g8s_A 333 DGYLYVLTDESSGELLK 349 (353)
T ss_dssp TSCEEEEECSTTEEEEE
T ss_pred CCcEEEEEeCCCCEEEE
Confidence 99977765433334443
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.08 E-value=0.0075 Score=56.57 Aligned_cols=202 Identities=8% Similarity=-0.066 Sum_probs=117.0
Q ss_pred CcceeEEEeCCCCcEE-EEEecCCeEEEEEecCCce--EEEEEeccCCCceEEEEEcCCCCEEEEE-eCCCeEEEEeccC
Q 016982 10 AQCITCHAWSPDHAMV-AFCPNNNEVHIYKLIQEKW--EKLHVLQKHDQIVSGIDWSVRSNRIVTV-SHDRNSYVWNQEG 85 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~~ 85 (379)
...+.+++|++....| ++-...+.|+.+++..... .....+.........|++.+.++.|+.+ ...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3456788888854444 4444567888888875311 1222333233456789998877666554 4567899999886
Q ss_pred CceeeeEEeecCCCceeEEEECCCCCEEEEEeC-C-CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-
Q 016982 86 SEWVPTLVILRLNRAALCVQWSPKENKFAVGSG-A-KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT- 162 (379)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~- 162 (379)
......+ ...-.....|++.|.+..|+.... . +.|...+++... ...+..........|++++.+..|+.+
T Consensus 503 ~~~~~l~--~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~----~~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 503 VKRKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----IYSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSEEEEE--ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----EEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEE--eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc----eEEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 6532222 233356789999997666666553 2 667777766544 223313334567899999776655555
Q ss_pred eCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ec--CCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCc
Q 016982 163 STDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DL--SFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSP 238 (379)
Q Consensus 163 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~~ 238 (379)
...+.|..+++. +.....+ .. .-.....|++. +.+|+.+ ...+.|...|..++..
T Consensus 577 ~~~~~I~~~d~d-------------------G~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 577 SKLHSISSIDVN-------------------GGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp TTTTEEEEEETT-------------------SCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred CCCCcEEEEecC-------------------CCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcc
Confidence 445678888762 1111111 11 11234566664 3344444 4567888888666543
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.06 E-value=0.0017 Score=53.55 Aligned_cols=238 Identities=11% Similarity=0.076 Sum_probs=118.2
Q ss_pred CCcEEEEEe-cC-----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeccCCc--
Q 016982 21 DHAMVAFCP-NN-----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-----RNSYVWNQEGSE-- 87 (379)
Q Consensus 21 ~~~~l~~~~-~d-----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~-- 87 (379)
++.+++.|+ .+ ..+.+||..++++..+..+.........+. .++..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 556777777 33 478999999887766654443222222222 246666777654 358999998877
Q ss_pred -eeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 88 -WVPTLVILRLNRAALCVQWSPKENKFAVGSGA-----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 88 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
+...-...........+.+ +++.++.|+.+ ..+.+||..+.. |.....+ .........+.+ +++.++.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~iyv~ 165 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ-WSMLGDM-QTAREGAGLVVA--SGVIYCL 165 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE-EEEEEEC-SSCCBSCEEEEE--TTEEEEE
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe-EEECCCC-CCCcccceEEEE--CCEEEEE
Confidence 5544221111111222222 56777777653 356777766554 3332222 111122222222 6778888
Q ss_pred eeCC-----CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC-----CeEEEE
Q 016982 162 TSTD-----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN-----SMIYFV 231 (379)
Q Consensus 162 ~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~v~ 231 (379)
|+.+ ..+.+||+... ....+..+.........+.+ ++++++.|+.+ ..+.+|
T Consensus 166 GG~~~~~~~~~~~~~d~~~~----------------~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTG----------------HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTT----------------EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEE
T ss_pred CCCCCCcccceEEEEeCCCC----------------cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEE
Confidence 7754 35778886311 11111111111111122222 56667777653 468999
Q ss_pred ECCCCCceeeeeeeec-CCeeeEEEecCCcEEE-EEeCC-----CeEEEEecCCCcEEEEEEe
Q 016982 232 DDVGPSPLAQNVAFRD-LPLRDVLFVSEKMVIG-VGFDC-----NPMVFAADETGIWTFIKFL 287 (379)
Q Consensus 232 d~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~-~~~d~-----~~~i~~~~~~~~~~~~~~~ 287 (379)
|+.+..- ..+.... ......+..-++++++ +|.++ .+.+|+.. ...|.....+
T Consensus 228 d~~~~~W--~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~ 287 (301)
T 2vpj_A 228 NIRTDSW--TTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI-IDSWEVVTSM 287 (301)
T ss_dssp ETTTTEE--EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETT-TTEEEEEEEE
T ss_pred eCCCCcE--EECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCC-CCeEEEcCCC
Confidence 9876531 2222111 1111122223666665 44443 23444433 3568776543
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0073 Score=55.23 Aligned_cols=222 Identities=12% Similarity=0.032 Sum_probs=132.4
Q ss_pred cEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCceeeeEEeecCCCce
Q 016982 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWVPTLVILRLNRAA 101 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~v 101 (379)
.+|+.+ ....|+..++.+........+.+ -..+..++|++.+..|+.+. .++.|..+++........+ .......
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~--~~g~~~P 82 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV--EFGLDYP 82 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSSCSCC
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE--eCCCCCc
Confidence 355554 45789999998764332222222 34578999999877776554 5688999988765432222 2222456
Q ss_pred eEEEECCCCCEEE-EEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee--CCCeEEEEecccccc
Q 016982 102 LCVQWSPKENKFA-VGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS--TDGKCRVFSTFIKGV 178 (379)
Q Consensus 102 ~~~~~~~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~i~v~d~~~~~~ 178 (379)
..+++.+.+..|+ +-...+.|.+.+++... .+.+....-.....+++.|....|.... ..+.|...++.
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~----~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d---- 154 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQH----RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD---- 154 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTT----CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT----
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCc----EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC----
Confidence 7888887655454 44456788888876554 2222123445678999998654555444 24567666652
Q ss_pred ccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCceeeeeeeecCCeeeEEEec
Q 016982 179 DIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVS 257 (379)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~ 257 (379)
+.....+-..-.....++++++++.|+.+. ..+.|..+|+..... +.+........++++..
T Consensus 155 ---------------G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 155 ---------------GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp ---------------SCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET
T ss_pred ---------------CCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC
Confidence 222222222345678999999877776664 567899999876543 23333333456777765
Q ss_pred CCcEEEEEe-CCCeEEEE
Q 016982 258 EKMVIGVGF-DCNPMVFA 274 (379)
Q Consensus 258 ~~~~l~~~~-d~~~~i~~ 274 (379)
+.++.+.. .+.|..++
T Consensus 218 -~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 218 -DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp -TEEEEEETTTTEEEEEE
T ss_pred -CEEEEecCCCCEEEEEE
Confidence 34444433 44555554
No 299
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.01 E-value=0.0023 Score=52.93 Aligned_cols=191 Identities=14% Similarity=0.058 Sum_probs=98.9
Q ss_pred CCCcEEEEEec----CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeC----C-----CeEEEEeccCC
Q 016982 20 PDHAMVAFCPN----NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH----D-----RNSYVWNQEGS 86 (379)
Q Consensus 20 ~~~~~l~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~i~vw~~~~~ 86 (379)
-++.+++.|+. -..+.+||..+.++..+..+.........+.+ ++..++.|+. + ..+.+||..+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 35677888874 24789999998877766544432222222222 4556666654 2 35889999888
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA-----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
++...-...........+.+ ++++++.|+.+ ..+.+||..+.. |.....+ .........+.+ ++++++.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDE-WHLVAPM-LTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTE-EEECCCC-SSCCBSCEEEEE--TTEEEEE
T ss_pred eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCe-EeECCCC-CccccceEEEEE--CCEEEEE
Confidence 76544321111112222222 56777776643 346677766543 2222222 111122222333 6778888
Q ss_pred eeCC-----CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC-----CeEEEE
Q 016982 162 TSTD-----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN-----SMIYFV 231 (379)
Q Consensus 162 ~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~v~ 231 (379)
|+.+ ..+.+||+.... ...+..+.........+.+ ++++++.|+.+ ..+.+|
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNE----------------WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTE----------------EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEE
T ss_pred eCCCCCCcCceEEEEeCCCCe----------------EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEE
Confidence 7764 357788863211 1111111111111222333 56677777654 568999
Q ss_pred ECCCC
Q 016982 232 DDVGP 236 (379)
Q Consensus 232 d~~~~ 236 (379)
|+.+.
T Consensus 237 d~~~~ 241 (308)
T 1zgk_A 237 DVETE 241 (308)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 98775
No 300
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.99 E-value=0.0042 Score=50.66 Aligned_cols=241 Identities=13% Similarity=0.168 Sum_probs=146.4
Q ss_pred EEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC-ceeeeEEe
Q 016982 16 HAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS-EWVPTLVI 94 (379)
Q Consensus 16 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-~~~~~~~~ 94 (379)
.-.+|..+.+|.-. ...++|||+++. ..+....- ..+|.-=.|-.+. .|+..+ +..|+-|+++.. .+...+
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK--~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvF-- 143 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMK--SKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMF-- 143 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTT--EEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEE--
T ss_pred eeeCCCccEEEEec-CCeEEEechHHh--hhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceee--
Confidence 34578888777765 579999999998 45555443 3467777786544 454444 357999999764 222333
Q ss_pred ecC----CCceeEEEECCCCCEEEEEeC-------CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC---CcEEE
Q 016982 95 LRL----NRAALCVQWSPKENKFAVGSG-------AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN---NVFLA 160 (379)
Q Consensus 95 ~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~ 160 (379)
..| ...|.....+++.++++..+- .|.+.+|..+.+. .+.+ .+|......+...-+ .++++
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~i-eGhaa~F~~~~~~g~~~~~~lf~ 218 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPI-EGHAASFAQFKMEGNAEESTLFC 218 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEE-CCSEEEEEEECCTTCSSCEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----ccee-eeeeeeeEEEecCCCCCCceEEE
Confidence 333 356777778888888776542 4678888776663 5666 777665544433211 13444
Q ss_pred EeeC---CCeEEEEeccccccccccccCCCccCCcccceEEE-e---ecCCcceEEEEECCCCCEEEEEcCCCeEEEEEC
Q 016982 161 TTST---DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ-L---DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDD 233 (379)
Q Consensus 161 ~~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~ 233 (379)
.+.. .+.++|.++. ...... ....+.... + +...+-.-++..|+.-..+..-..-|.+++||+
T Consensus 219 fa~r~~~g~kLhIiEi~-----~~~~~~-----~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDl 288 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVG-----TPPTGN-----QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDL 288 (365)
T ss_dssp EEEEETTEEEEEEEECS-----SCCTTC-----CCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred EEEecCCCcEEEEEEcC-----CCCCCC-----CCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEc
Confidence 4433 2578888762 110000 011111222 1 112344567888887777888889999999999
Q ss_pred CCCCceeeeeeeecCCeeeEEEec-CCcEEEEEeCCCeEEEEecCCCc
Q 016982 234 VGPSPLAQNVAFRDLPLRDVLFVS-EKMVIGVGFDCNPMVFAADETGI 280 (379)
Q Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d~~~~i~~~~~~~~ 280 (379)
.++..+ ..-.-...+|..-+-.. .+-+++....|.+.....++...
T Consensus 289 eTgt~i-~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 289 ETGTCI-YMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp TTCCEE-EEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred ccCcEE-EEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 998743 44444455665544443 45667777777777666666543
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.99 E-value=0.0034 Score=51.80 Aligned_cols=144 Identities=10% Similarity=0.151 Sum_probs=79.4
Q ss_pred CcEEEEEec--CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC----CeEEEEeccCCceeeeEEee
Q 016982 22 HAMVAFCPN--NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD----RNSYVWNQEGSEWVPTLVIL 95 (379)
Q Consensus 22 ~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vw~~~~~~~~~~~~~~ 95 (379)
+.+++.|+. ...+.+||..+++|..+..+.........+.+ ++..++.|+.+ ..+.+||..+.++...-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345666664 35799999999877766555433222223332 45666777654 56889999998765543221
Q ss_pred cCCCceeEEEECCCCCEEEEEeCC------CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC-----
Q 016982 96 RLNRAALCVQWSPKENKFAVGSGA------KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST----- 164 (379)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~----- 164 (379)
........+.+ ++++++.|+.+ ..+.+||..+.. |.....+ .........+.+ ++++++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES-WHTKPSM-LTQRCSHGMVEA--NGLIYVCGGSLGNNV 163 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE--TTEEEEECCEESCTT
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc-eEeCCCC-cCCcceeEEEEE--CCEEEEECCCCCCCC
Confidence 11111222222 56777777754 457777776654 3222222 111112222222 6677777764
Q ss_pred ----CCeEEEEec
Q 016982 165 ----DGKCRVFST 173 (379)
Q Consensus 165 ----d~~i~v~d~ 173 (379)
-..+.+||+
T Consensus 164 ~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 164 SGRVLNSCEVYDP 176 (306)
T ss_dssp TCEECCCEEEEET
T ss_pred cccccceEEEeCC
Confidence 344778886
No 302
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.99 E-value=0.0022 Score=52.88 Aligned_cols=190 Identities=14% Similarity=0.116 Sum_probs=96.9
Q ss_pred CCcEEEEEecC----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeccCCceeee
Q 016982 21 DHAMVAFCPNN----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-----RNSYVWNQEGSEWVPT 91 (379)
Q Consensus 21 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~ 91 (379)
++.+++.|+.+ ..+..||..+.++..+..+......-..+.+ ++..++.|+.+ ..+.+||..+.++...
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 34567777653 4688999998877766544432222222222 55666676644 3588999988876554
Q ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCC-----eEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCC-
Q 016982 92 LVILRLNRAALCVQWSPKENKFAVGSGAK-----TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTD- 165 (379)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d- 165 (379)
-...........+.+ ++..++.|+.++ .+.+||..+.. |.....+ .........+.+ +++.++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~ 166 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE-WFHVAPM-NTRRSSVGVGVV--GGLLYAVGGYDV 166 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE-EEEECCC-SSCCBSCEEEEE--TTEEEEECCEET
T ss_pred CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe-EeecCCC-CCcccCceEEEE--CCEEEEEeCCCC
Confidence 321111111222222 567777777543 35566655443 2222222 111122222222 67777777643
Q ss_pred ------CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC-----CeEEEEECC
Q 016982 166 ------GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN-----SMIYFVDDV 234 (379)
Q Consensus 166 ------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~v~d~~ 234 (379)
..+.+||+... ....+..+.........+.+ ++++++.|+.+ ..+.+||+.
T Consensus 167 ~~~~~~~~~~~yd~~~~----------------~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTN----------------EWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp TTTEECCCEEEEETTTT----------------EEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETT
T ss_pred CCCccccEEEEEeCCCC----------------cEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCC
Confidence 34778876311 11111111111111222222 56677777654 468899987
Q ss_pred CC
Q 016982 235 GP 236 (379)
Q Consensus 235 ~~ 236 (379)
+.
T Consensus 229 ~~ 230 (302)
T 2xn4_A 229 TN 230 (302)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.0098 Score=52.18 Aligned_cols=199 Identities=9% Similarity=-0.016 Sum_probs=114.7
Q ss_pred ceeEEEe-------CCCCcEEEEEecCC-------eEEEEEecC-Cce------EEEEEeccCCCceEEEEEcCCCCE-E
Q 016982 12 CITCHAW-------SPDHAMVAFCPNNN-------EVHIYKLIQ-EKW------EKLHVLQKHDQIVSGIDWSVRSNR-I 69 (379)
Q Consensus 12 ~i~~~~~-------s~~~~~l~~~~~dg-------~i~i~~~~~-~~~------~~~~~~~~~~~~v~~~~~~~~~~~-l 69 (379)
....++| +++|+.|+++...+ .|.+++... +.+ ..+..+. ....++++|++.. +
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~----~p~giavdp~~g~LY 262 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK----QCNGATIHPINGELY 262 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES----CCCCEEECTTTCCEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC----CceEEEEcCCCCeEE
Confidence 5889999 99998666665543 266665443 222 2222222 3357889995544 5
Q ss_pred EEEeCCCeEEEEecc-------CCce-----------eeeEEeecCCCceeEEEECCCCCEEEEE-eCCCeEEEEEeecC
Q 016982 70 VTVSHDRNSYVWNQE-------GSEW-----------VPTLVILRLNRAALCVQWSPKENKFAVG-SGAKTVCICYYEQE 130 (379)
Q Consensus 70 ~~~~~d~~i~vw~~~-------~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~~~~~~ 130 (379)
++-..++.|..+|+. ++.. ...+...+.......++|+|+|+.|.++ .....|+.++++..
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 555577889999997 5543 1122112233456899999999965555 45678888777653
Q ss_pred CceeE--EEEEeecC---------------CcCEE-EEEEc-------CCCcEEEEeeCCCeEEEEeccccccccccccC
Q 016982 131 NNWWV--SKLIRKRH---------------DSSVT-SVAWH-------PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKE 185 (379)
Q Consensus 131 ~~~~~--~~~~~~~~---------------~~~v~-~~~~~-------p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 185 (379)
... + ...+ .+. -.... .+... +++.++++-..+..|+.++..
T Consensus 343 ~~~-~~~~~~~-aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~----------- 409 (496)
T 3kya_A 343 KKE-FITPYNF-VGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE----------- 409 (496)
T ss_dssp TTE-ECCCEEE-EEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTT-----------
T ss_pred cce-ecccEEe-cCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCC-----------
Confidence 311 1 0111 111 01233 44444 456666666677888888742
Q ss_pred CCccCCcccceEEEeec------------------------CCcceEEEEECCC-CCEEEEEcCCCeEEEEECCCC
Q 016982 186 GTSSDTKFGEQILQLDL------------------------SFSWAFGVKWSPS-GNTLAYVGHNSMIYFVDDVGP 236 (379)
Q Consensus 186 ~~~~~~~~~~~~~~~~~------------------------~~~~v~~~~~sp~-~~~l~~~~~d~~i~v~d~~~~ 236 (379)
+ .+.++-+ .-.....|+++++ |.++++=.....|+.+++...
T Consensus 410 --------G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 410 --------G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp --------C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred --------C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 1 1111111 1123578888886 665555556778888887654
No 304
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.90 E-value=0.0016 Score=53.85 Aligned_cols=190 Identities=6% Similarity=0.039 Sum_probs=101.2
Q ss_pred CCcEEEEEecC----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC------CeEEEEeccCCceee
Q 016982 21 DHAMVAFCPNN----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD------RNSYVWNQEGSEWVP 90 (379)
Q Consensus 21 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~vw~~~~~~~~~ 90 (379)
++.+++.|+.+ ..+.+||..++++..+..+.........+.+ +++.++.|+.+ ..+.+||..+.++..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56777888754 6789999999888777665533322223333 56666777654 458899999887655
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeC---------CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSG---------AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
.-.. .....-.++.. -++++++.|+. -..+.+||..+.. |.....+ .........+.+ ++++++.
T Consensus 133 ~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~i~v~ 206 (306)
T 3ii7_A 133 KPSM-LTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-WTELCPM-IEARKNHGLVFV--KDKIFAV 206 (306)
T ss_dssp ECCC-SSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE--TTEEEEE
T ss_pred CCCC-cCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCe-EEECCCc-cchhhcceEEEE--CCEEEEE
Confidence 4221 11111112222 25666777653 2447777776653 3222222 111112222223 6778888
Q ss_pred eeCC-----CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC-----CeEEEE
Q 016982 162 TSTD-----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN-----SMIYFV 231 (379)
Q Consensus 162 ~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~v~ 231 (379)
|+.+ ..+.+||+... ....+..+.........+.+ ++++++.|+.+ ..+.+|
T Consensus 207 GG~~~~~~~~~~~~yd~~~~----------------~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y 268 (306)
T 3ii7_A 207 GGQNGLGGLDNVEYYDIKLN----------------EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEY 268 (306)
T ss_dssp CCEETTEEBCCEEEEETTTT----------------EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEE
T ss_pred eCCCCCCCCceEEEeeCCCC----------------cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEE
Confidence 7754 35778886311 11111111111112223333 56777777743 467788
Q ss_pred ECCCC
Q 016982 232 DDVGP 236 (379)
Q Consensus 232 d~~~~ 236 (379)
|+.+.
T Consensus 269 d~~~~ 273 (306)
T 3ii7_A 269 NTETD 273 (306)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 87664
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.90 E-value=0.002 Score=53.01 Aligned_cols=145 Identities=9% Similarity=0.092 Sum_probs=82.5
Q ss_pred CCcEEEEEecC-----CeEEEEEecCCc---eEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeccCCc
Q 016982 21 DHAMVAFCPNN-----NEVHIYKLIQEK---WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-----RNSYVWNQEGSE 87 (379)
Q Consensus 21 ~~~~l~~~~~d-----g~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~ 87 (379)
++.+++.|+.+ ..+.+||..+++ ++.+..+.........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56777777754 468999999887 7777655443322223333 46666666543 358899999887
Q ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe
Q 016982 88 WVPTLVILRLNRAALCVQWSPKENKFAVGSGA-----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT 162 (379)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 162 (379)
+...-...........+.+ ++++++.|+.+ ..+.+||..+.. |.....+ .........+.+ ++++++.|
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~i~v~G 213 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPM-ATKRSGAGVALL--NDHIYVVG 213 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE--TTEEEEEC
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCC-CcccccceEEEE--CCEEEEEe
Confidence 7654332211111222222 57777777654 347777776653 3222222 111112222333 67788888
Q ss_pred eCC-----CeEEEEec
Q 016982 163 STD-----GKCRVFST 173 (379)
Q Consensus 163 ~~d-----~~i~v~d~ 173 (379)
+.+ ..+.+||+
T Consensus 214 G~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNI 229 (301)
T ss_dssp CBCSSSBCCCEEEEET
T ss_pred CCCCCcccceEEEEeC
Confidence 764 45888886
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.88 E-value=0.024 Score=55.67 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=48.7
Q ss_pred cCcceeEEEeCCC------CcEEEEEec-CCeEEEEEecCCceEEEEEeccCCCceEEEEEc--CCCCEEEEEeCCCeEE
Q 016982 9 FAQCITCHAWSPD------HAMVAFCPN-NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSHDRNSY 79 (379)
Q Consensus 9 ~~~~i~~~~~s~~------~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~ 79 (379)
....|.|+++.|. ++++|+|.. |++|+|+++.+-+......+.. .....++.+. ....+|..|-.||.+.
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 3578999999863 368999996 9999999998643222233432 1223333332 2335788888999876
Q ss_pred EEecc
Q 016982 80 VWNQE 84 (379)
Q Consensus 80 vw~~~ 84 (379)
-+.+.
T Consensus 631 ~~~~d 635 (1158)
T 3ei3_A 631 YFGLN 635 (1158)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 66553
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.88 E-value=0.00036 Score=64.77 Aligned_cols=178 Identities=11% Similarity=-0.041 Sum_probs=96.5
Q ss_pred CCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCeEEEEEeecCCc-eeEEEEEeecCCcCEEEEEE
Q 016982 75 DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS-GAKTVCICYYEQENN-WWVSKLIRKRHDSSVTSVAW 152 (379)
Q Consensus 75 d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~~~~~~~~-~~~~~~~~~~~~~~v~~~~~ 152 (379)
.+.|+..++.+.+....+ .....+..++|++.+..|+.+. ..+.|+.+++..... ......+ .........+++
T Consensus 385 ~~~I~~id~~~~~~~~~~---~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSCCEECCS---CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC--CCCEEC
T ss_pred ccceEEEeCCCCcceeee---ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCCcceEEE
Confidence 456888888776543332 2234567899998776666654 457888888765110 0011111 111223456788
Q ss_pred cCCC-cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEcC--CCeE
Q 016982 153 HPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVGH--NSMI 228 (379)
Q Consensus 153 ~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~--d~~i 228 (379)
.+.+ +++++-...+.|.++++. +.....+ .........++++|.+.+|+.+.. .+.|
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~d-------------------g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I 521 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTK-------------------GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKI 521 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSS-------------------SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCE
T ss_pred EeeCCcEEEEeccCCeEEEEecC-------------------CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeE
Confidence 7544 555554567789888752 2222222 222234578899997666655443 2678
Q ss_pred EEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEE--eCCCeEEEEec
Q 016982 229 YFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVG--FDCNPMVFAAD 276 (379)
Q Consensus 229 ~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~d~~~~i~~~~ 276 (379)
..+++...... ..+...-.....|+|+|++..|..+ ..+.|..++++
T Consensus 522 ~~~~~dG~~~~-~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 522 KKGGLNGVDIY-SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp EBCCSSSCCCC-EESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EEEeCCCCCee-EEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 88877654321 1122223346789999876544433 33345555444
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.87 E-value=0.011 Score=53.99 Aligned_cols=199 Identities=8% Similarity=-0.023 Sum_probs=112.4
Q ss_pred cceeEEEeCCCCcEEEEEe-cCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEE-eCCCeEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVAFCP-NNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTV-SHDRNSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~~ 88 (379)
..+.+++|++.++.|..+. ..+.|..+++.+.. .....+...-.....+++.+.++.|+.+ ...+.|.+.++.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~-~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE-SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC-ceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 4567888988666555443 46788888877541 1122333333467899999876666555 4568899999876542
Q ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-eCC
Q 016982 89 VPTLVILRLNRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT-STD 165 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d 165 (379)
..+. ...-.....+++.|.+..|+.... .+.|...+++... ...+..........+++++++..|..+ ...
T Consensus 119 -~~l~-~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~----~~~l~~~~~~~P~Glald~~~~~LY~aD~~~ 192 (619)
T 3s94_A 119 -KVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----RFIIINSEIYWPNGLTLDYEEQKLYWADAKL 192 (619)
T ss_dssp -EEEE-CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEEEECSSCSSEEEEEEETTTTEEEEEETTT
T ss_pred -EEEE-eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc----eEEEEeCCCCCCcEEEEEccCCEEEEEeCCC
Confidence 2221 233456789999997666665553 3456555555433 222213344567899999876555544 456
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCC
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPS 237 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~ 237 (379)
+.|..+|+.. .....+ .........+++..+ .|+.+ ...+.|...|..+++
T Consensus 193 ~~I~~~~~dG-------------------~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 193 NFIHKSNLDG-------------------TNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp CCEEEESSSC-------------------CEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCC
T ss_pred CeEEEecCCC-------------------CccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCc
Confidence 7788887631 111111 111112345666655 44444 356778888876554
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.86 E-value=0.0061 Score=50.54 Aligned_cols=186 Identities=10% Similarity=0.015 Sum_probs=94.6
Q ss_pred EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeC-----C------CeEEEEeccCCceeeeE
Q 016982 24 MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH-----D------RNSYVWNQEGSEWVPTL 92 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~i~vw~~~~~~~~~~~ 92 (379)
+++.|+ ..+.+||..+++|.. ..+..............++..++.|+. . ..+.+||..+.++...-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 445565 579999999987765 444332222233333456777777773 1 12778899888764432
Q ss_pred EeecCCCceeEEEECCCCCEEEEEeCC--------CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 93 VILRLNRAALCVQWSPKENKFAVGSGA--------KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
.. .....-.+++.. ++..++.|+.+ ..+.+||..+.. |.....+ .........+. -+++.++.|+.
T Consensus 84 ~~-p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~-p~~r~~~~~~~--~~~~iyv~GG~ 157 (315)
T 4asc_A 84 PL-PSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPL-PYVVYGHTVLS--HMDLVYVIGGK 157 (315)
T ss_dssp CB-SSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCC-SSCCBSCEEEE--ETTEEEEECCB
T ss_pred CC-CcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCC-CCcccceeEEE--ECCEEEEEeCC
Confidence 11 111111122222 56677777632 347777776553 3222222 11112222222 36778888876
Q ss_pred -C-----CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCC-----eEEEEEC
Q 016982 165 -D-----GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNS-----MIYFVDD 233 (379)
Q Consensus 165 -d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~v~d~ 233 (379)
+ ..+.+||+.... ...+..+.........+.+ ++++++.|+.++ .+.+||+
T Consensus 158 ~~~~~~~~~~~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFE----------------WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp CTTSCBCCCEEEEETTTTE----------------EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEET
T ss_pred CCCCcccceEEEEeCCCCe----------------EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEEC
Confidence 2 357888863211 1111111111111122222 567777776543 5888998
Q ss_pred CCC
Q 016982 234 VGP 236 (379)
Q Consensus 234 ~~~ 236 (379)
.+.
T Consensus 220 ~~~ 222 (315)
T 4asc_A 220 TDN 222 (315)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.84 E-value=0.00022 Score=66.13 Aligned_cols=216 Identities=17% Similarity=0.084 Sum_probs=115.6
Q ss_pred CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccC----CceeeeEEeecCCCceeEEE
Q 016982 31 NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEG----SEWVPTLVILRLNRAALCVQ 105 (379)
Q Consensus 31 dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~----~~~~~~~~~~~~~~~v~~~~ 105 (379)
.+.|+..++.+.+ ....+. ....+..++|++.+..|+.+. ..+.|+.+++.+ ......+ ...-.....++
T Consensus 385 ~~~I~~id~~~~~--~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i--~~~~~~P~gla 459 (699)
T 1n7d_A 385 RHEVRKMTLDRSE--YTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--SRDIQAPDGLA 459 (699)
T ss_dssp TTC-CEECTTSCC--EECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC--CSCC--CCCEE
T ss_pred ccceEEEeCCCCc--ceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE--eCCCCCcceEE
Confidence 3578888877652 222222 234567899998777776654 457899998875 2211111 11123456788
Q ss_pred ECCCC-CEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC--CCeEEEEecccccccccc
Q 016982 106 WSPKE-NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST--DGKCRVFSTFIKGVDIKE 182 (379)
Q Consensus 106 ~~~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--d~~i~v~d~~~~~~~~~~ 182 (379)
+.+.+ +++++-...+.|.+++++... ....+ .........++++|.+.+|+.... .+.|.++++.
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg~~---~~~l~-~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d-------- 527 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLF-REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-------- 527 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSSCC---EEEEC-CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS--------
T ss_pred EEeeCCcEEEEeccCCeEEEEecCCCc---eEEEE-eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC--------
Confidence 88644 444444556788888776554 22222 222344578899987655544432 2667776642
Q ss_pred ccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEE-cCCCeEEEEECCCCCceeeeeee--ecCCeeeEEEecC
Q 016982 183 KKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYV-GHNSMIYFVDDVGPSPLAQNVAF--RDLPLRDVLFVSE 258 (379)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~--~~~~i~~~~~s~~ 258 (379)
+.....+ ...-.....|+|+|++..|+.+ ...+.|..+++...... ..+.. .......+++..+
T Consensus 528 -----------G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 528 -----------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLAVFED 595 (699)
T ss_dssp -----------SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE-EECCCSSSCSSCCCCEEETT
T ss_pred -----------CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE-EEEecCCcCCCceEeEEECC
Confidence 1111111 1112345789999976555544 46678999998654321 22211 1123456666554
Q ss_pred CcEEEEEeCCCeEEEEe
Q 016982 259 KMVIGVGFDCNPMVFAA 275 (379)
Q Consensus 259 ~~~l~~~~d~~~~i~~~ 275 (379)
.-|++....+.|..++.
T Consensus 596 ~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 596 KVFWTDIINEAIFSANR 612 (699)
T ss_dssp EEEEECSTTTCEEEEET
T ss_pred EEEEEeCCCCeEEEEEc
Confidence 22223333445555543
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.81 E-value=0.011 Score=49.55 Aligned_cols=188 Identities=13% Similarity=0.075 Sum_probs=108.6
Q ss_pred ceEEEEEcCCCCEEEEE------------eCCCeEEEEeccCC--ceeeeEEeec-----CCCceeEEEECC--CCC-EE
Q 016982 56 IVSGIDWSVRSNRIVTV------------SHDRNSYVWNQEGS--EWVPTLVILR-----LNRAALCVQWSP--KEN-KF 113 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~------------~~d~~i~vw~~~~~--~~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l 113 (379)
....+...|+|..++++ ..+|.|.++|..+. +. ..+...+ .......+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 34567778877554444 16899999998743 32 2233332 123566777755 353 34
Q ss_pred EEEe-C--CCeEEEEEeecCCc-eeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC-----------------CCeEEEEe
Q 016982 114 AVGS-G--AKTVCICYYEQENN-WWVSKLIRKRHDSSVTSVAWHPNNVFLATTST-----------------DGKCRVFS 172 (379)
Q Consensus 114 ~~~~-~--d~~v~i~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-----------------d~~i~v~d 172 (379)
+++. . +..+.+|+++.... ......+........+++.+.++|.++++... .|.+.-+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 4443 2 56788998887543 12222331222356789999999987776541 13333333
Q ss_pred ccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCCcee--eeeeeecCC
Q 016982 173 TFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPSPLA--QNVAFRDLP 249 (379)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~~~~--~~~~~~~~~ 249 (379)
. ++ +..+...-...+.++|+||++.|+.+. ..+.|..|++.....+. +.+ .....
T Consensus 210 ~--------------------~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~ 267 (355)
T 3sre_A 210 P--------------------ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTL 267 (355)
T ss_dssp T--------------------TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSE
T ss_pred C--------------------Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCC
Confidence 1 11 111211123468999999998877664 56899999986433221 222 22345
Q ss_pred eeeEEEec-CCcEEEEEe
Q 016982 250 LRDVLFVS-EKMVIGVGF 266 (379)
Q Consensus 250 i~~~~~s~-~~~~l~~~~ 266 (379)
.-.+++.+ +|.+.+++.
T Consensus 268 PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEECTTTCCEEEEEE
T ss_pred CceEEEeCCCCcEEEEec
Confidence 67788888 588877554
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.81 E-value=0.0017 Score=53.47 Aligned_cols=145 Identities=16% Similarity=0.207 Sum_probs=80.5
Q ss_pred CCcEEEEEecC-----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeccCCceee
Q 016982 21 DHAMVAFCPNN-----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR-----NSYVWNQEGSEWVP 90 (379)
Q Consensus 21 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~~~~~~~~ 90 (379)
++.+++.|+.+ ..+.+||..+.++..+..+.........+.+ ++..++.|+.++ .+.+||+.+.++..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56777777754 3688999998877777655443322223333 466667776543 47889998887655
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-------CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGA-------KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.-.. .....-.+++. -+++.++.|+.+ ..+.+||..+.. |.....+ .........+.+ ++++++.|+
T Consensus 139 ~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG 212 (302)
T 2xn4_A 139 VAPM-NTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNE-WTYIAEM-STRRSGAGVGVL--NNLLYAVGG 212 (302)
T ss_dssp ECCC-SSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE--TTEEEEECC
T ss_pred cCCC-CCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCc-EEECCCC-ccccccccEEEE--CCEEEEECC
Confidence 4221 11111122222 256677776542 346777776553 3222222 111122222333 678888887
Q ss_pred CC-----CeEEEEec
Q 016982 164 TD-----GKCRVFST 173 (379)
Q Consensus 164 ~d-----~~i~v~d~ 173 (379)
.+ ..+.+||+
T Consensus 213 ~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 213 HDGPLVRKSVEVYDP 227 (302)
T ss_dssp BSSSSBCCCEEEEET
T ss_pred CCCCcccceEEEEeC
Confidence 64 35788886
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.78 E-value=0.022 Score=52.08 Aligned_cols=198 Identities=7% Similarity=-0.057 Sum_probs=118.6
Q ss_pred cceeEEEeCCCCcEEE-EEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCce
Q 016982 11 QCITCHAWSPDHAMVA-FCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEW 88 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~ 88 (379)
..+.+++|++.+..|. +-..++.|+.+++.....+. .+.........+++.+.+..|+.+. ..+.|.+.++.....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~--v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH--VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEE--EEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 3567899998665554 44457889988887653222 2222223457888887766665544 567899999876542
Q ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeC--CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEe-eCC
Q 016982 89 VPTLVILRLNRAALCVQWSPKENKFAVGSG--AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATT-STD 165 (379)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~d 165 (379)
..+. ...-.....+++.|....|+.... .+.|...+++... ...+ .........++++++++.|..+ ...
T Consensus 115 -~~l~-~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~----~~~l-~~~~~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 115 -QVLV-WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE----RTTL-VPNVGRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp -EEEE-CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEEE-ECSCSSEEEEEEETTTTEEEEEETTT
T ss_pred -EEEE-eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc----eEEE-ECCCCCcceEEEccccCEEEEEECCC
Confidence 2221 233356789999996555665543 4566666665544 2222 2344567899999976655554 456
Q ss_pred CeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC
Q 016982 166 GKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS 237 (379)
Q Consensus 166 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~ 237 (379)
+.|..+|+.. ... ..+.........+++.. +.++++-...+.|...|..+++
T Consensus 188 ~~I~~~d~dG-----------------~~~--~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 188 NLIESSNMLG-----------------LNR--EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp TEEEEEETTS-----------------CSC--EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEcCCC-----------------Cce--EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 7888888631 011 11222223355777764 3444444457888888865553
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.75 E-value=0.011 Score=50.22 Aligned_cols=158 Identities=15% Similarity=0.125 Sum_probs=95.4
Q ss_pred CCCCEEEEEeCCCeEEEEeccCCceeeeEEeec--CCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCce--------
Q 016982 64 VRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILR--LNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNW-------- 133 (379)
Q Consensus 64 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~-------- 133 (379)
.+|..|+.+- ++.||.-++.....-+.+.... .-..+..+..+|+|++||..+. ..|.|..+..+...
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 3455555543 3667777776443223333221 1236788999999999999874 67888777632200
Q ss_pred -eEEEEEeec-----CCcCEEEEEEcCCC---cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCC
Q 016982 134 -WVSKLIRKR-----HDSSVTSVAWHPNN---VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF 204 (379)
Q Consensus 134 -~~~~~~~~~-----~~~~v~~~~~~p~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (379)
...+.+..+ ...+|..+.|+|-+ ..|++-..|+.|++||+.. ... .|. +.+.......+....
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~-----s~~-~P~--~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN-----SQE-KPI--VLNKPNNSFGLDARV 179 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC-----TTS-CCE--EESCCCSEEESCSSC
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc-----CCC-CCc--chhccccccCCCccc
Confidence 011222111 35679999999964 6899999999999999842 000 000 011111112223334
Q ss_pred cceEEEEECCCCCEEEEEc--CCCeEEEE
Q 016982 205 SWAFGVKWSPSGNTLAYVG--HNSMIYFV 231 (379)
Q Consensus 205 ~~v~~~~~sp~~~~l~~~~--~d~~i~v~ 231 (379)
..|.+++|.+++-.|...+ ..|.|+-.
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 6789999999887777644 77888765
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.69 E-value=0.0022 Score=53.10 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=80.2
Q ss_pred CCcEEEEEec----C-----CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeccCC
Q 016982 21 DHAMVAFCPN----N-----NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-----RNSYVWNQEGS 86 (379)
Q Consensus 21 ~~~~l~~~~~----d-----g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~ 86 (379)
++.+++.|+. + ..+.+||..+.++..+..+.........+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5677777765 2 4688999988877766554433222223333 46666666533 35889999888
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA-----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
++...-...........+.+ ++++++.|+.+ ..+.+||+.+.. |.....+ .........+.+ ++++++.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~--~~~iyv~ 221 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE-WRMITAM-NTIRSGAGVCVL--HNCIYAA 221 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EEECCCC-SSCCBSCEEEEE--TTEEEEE
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe-EeeCCCC-CCccccceEEEE--CCEEEEE
Confidence 76544321111112222222 56777777654 357777776543 3222222 111122223333 6778888
Q ss_pred eeCC-----CeEEEEec
Q 016982 162 TSTD-----GKCRVFST 173 (379)
Q Consensus 162 ~~~d-----~~i~v~d~ 173 (379)
|+.+ ..+.+||+
T Consensus 222 GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 222 GGYDGQDQLNSVERYDV 238 (308)
T ss_dssp CCBCSSSBCCCEEEEET
T ss_pred eCCCCCCccceEEEEeC
Confidence 8764 45888886
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.68 E-value=0.019 Score=48.44 Aligned_cols=105 Identities=13% Similarity=0.072 Sum_probs=60.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEe---ecCCCceeEEEECCC---CCEEEEEeC-C-----CeEE
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVI---LRLNRAALCVQWSPK---ENKFAVGSG-A-----KTVC 123 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~v~ 123 (379)
....++|.|+|+++++ ..++.|.+++ +++....... .........++++|+ +..|.++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4579999999985554 6679999988 4442222111 112356789999998 555554443 2 5677
Q ss_pred EEEeecCCce---eEEEEEee--cCCcCEEEEEEcCCCcEEEEee
Q 016982 124 ICYYEQENNW---WVSKLIRK--RHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 124 i~~~~~~~~~---~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.++....... .+...+.. ........++|.|+|.++++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7776643210 11111210 1112336899999998777654
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.65 E-value=0.021 Score=48.19 Aligned_cols=106 Identities=8% Similarity=-0.022 Sum_probs=60.4
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEe---ecCCCceeEEEECCC---CCEEEEEeC----C----C
Q 016982 55 QIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVI---LRLNRAALCVQWSPK---ENKFAVGSG----A----K 120 (379)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d----~ 120 (379)
.....++|.|+|+++ .+..++.|++++. +++ .....+ .........++++|+ +..|.++.. + .
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345799999999744 4566799999873 443 221111 112356889999997 444544432 2 4
Q ss_pred eEEEEEeecCC-ce----eEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 121 TVCICYYEQEN-NW----WVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 121 ~v~i~~~~~~~-~~----~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.|..++..... .. .+...+..........++|.|||.++++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56666665431 00 011112111112346799999998777654
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.56 E-value=0.016 Score=49.27 Aligned_cols=148 Identities=11% Similarity=0.145 Sum_probs=94.2
Q ss_pred CCCcEEEEEecCCeEEEEEecCC-ceEEEEEecc--CCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCce--------
Q 016982 20 PDHAMVAFCPNNNEVHIYKLIQE-KWEKLHVLQK--HDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEW-------- 88 (379)
Q Consensus 20 ~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~-------- 88 (379)
.+|..++++ .++.||.-++..+ .++.+. ++. .-..|..+..+|+|++||..+. ..|.|-.+..+..
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~-~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLN-FSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEE-CTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEe-cCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 455555555 3467888787743 233322 221 1225788999999999998764 5788888773310
Q ss_pred ----eeeEEeec----CCCceeEEEECCC---CCEEEEEeCCCeEEEEEeecCCceeEEEEEe--------ecCCcCEEE
Q 016982 89 ----VPTLVILR----LNRAALCVQWSPK---ENKFAVGSGAKTVCICYYEQENNWWVSKLIR--------KRHDSSVTS 149 (379)
Q Consensus 89 ----~~~~~~~~----~~~~v~~~~~~~~---~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~--------~~~~~~v~~ 149 (379)
...+.+.. ...+|..+.|||- +..|++-..|+.|++||+......+. .+. ......|.+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~--~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI--VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE--EESCCCSEEESCSSCCCEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc--chhccccccCCCcccceEEE
Confidence 11222211 2467999999994 56899999999999999986332111 120 122367889
Q ss_pred EEEcCCCcEEEE--eeCCCeEEEEe
Q 016982 150 VAWHPNNVFLAT--TSTDGKCRVFS 172 (379)
Q Consensus 150 ~~~~p~~~~l~~--~~~d~~i~v~d 172 (379)
++|.+++-.|.. .+++|.|+-..
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEcCCCcEEEEEecCCCCCEEEEC
Confidence 999998754544 44778876544
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.53 E-value=0.027 Score=49.28 Aligned_cols=109 Identities=9% Similarity=0.074 Sum_probs=62.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeec------CCCceeEEEECCC---CCEEEEEeC--------
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILR------LNRAALCVQWSPK---ENKFAVGSG-------- 118 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~-------- 118 (379)
....|+|.|+|+++++-...+.|++++..++.......+.. .......|+|+|+ +..|.+...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45799999999877765444578888766554332222111 2356679999995 444444432
Q ss_pred -----CCeEEEEEeecCCc-----eeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 119 -----AKTVCICYYEQENN-----WWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 119 -----d~~v~i~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
...|.-+++..... ..+...+..........++|.|||+++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 12455555543211 01111121122234689999999987777553
No 320
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.53 E-value=0.027 Score=46.25 Aligned_cols=197 Identities=12% Similarity=0.025 Sum_probs=106.5
Q ss_pred EEeCCCCcEEEEEecC--------------CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe--C--CCe
Q 016982 16 HAWSPDHAMVAFCPNN--------------NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS--H--DRN 77 (379)
Q Consensus 16 ~~~s~~~~~l~~~~~d--------------g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--d~~ 77 (379)
--++++|++|+..... ..|+..++.+.+.+.+.. . . +..|++++++|+... . +..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~--~--~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---D--P--CIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---S--C--EEEEEEETTEEEEEEESSSSCEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---C--C--ccEEEEeCCEEEEEeecCCCCce
Confidence 4467888888877553 356666666653233221 1 1 236788899988776 2 344
Q ss_pred EEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeC-CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC
Q 016982 78 SYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG-AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN 156 (379)
Q Consensus 78 i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 156 (379)
|..-++..... ..+ ..+.. ..++|+++.|+..+. ...|...+++... .+.+ .. +... ..+.|++
T Consensus 131 Iy~~~~dGs~~-~~l--t~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~----~~~l-~~--~~~~-~~~~P~g 195 (302)
T 3s25_A 131 LYRIRIDGEEK-KKI--KNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS----EALF-YD--CNCY-KPVVLDD 195 (302)
T ss_dssp EEEEETTSCCC-EEE--ESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE----EEEE-EC--SCEE-EEEEEET
T ss_pred EEEEECCCCCe-EEE--eCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC----EEEE-eC--CCcc-ceeeecC
Confidence 55556654442 222 22222 456778888887765 4566665555443 2333 22 2222 3456888
Q ss_pred cEEEEeeCCC--eEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEc--CCCeEEEEE
Q 016982 157 VFLATTSTDG--KCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVG--HNSMIYFVD 232 (379)
Q Consensus 157 ~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~i~v~d 232 (379)
.+|+.....+ .|..-++ .+.....+.. ..+ ..|+|++.+|..++ ..+.|...+
T Consensus 196 ~~iy~t~~~~~~~I~~~~l-------------------dG~~~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~ 252 (302)
T 3s25_A 196 TNVYYMDVNRDNAIVHVNI-------------------NNPNPVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVK 252 (302)
T ss_dssp TEEEEEEGGGTTEEEEECS-------------------SSCCCEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEE
T ss_pred CEEEEEEcCCCcEEEEEEC-------------------CCCCeEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEE
Confidence 8887765433 4444443 1222233322 223 34788899888763 346777777
Q ss_pred CCCCCceeeeeeeecCCeeeEEEecCCcEEE
Q 016982 233 DVGPSPLAQNVAFRDLPLRDVLFVSEKMVIG 263 (379)
Q Consensus 233 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 263 (379)
+....+ +.+... .+. .+++.+.+|.
T Consensus 253 ~DG~~r--~~l~~~--~~~--~i~i~~d~Iy 277 (302)
T 3s25_A 253 NDGTGF--KELAKG--EFC--NINVTSQYVY 277 (302)
T ss_dssp TTSCCC--EEEEES--CEE--EEEECSSEEE
T ss_pred CCCCcc--EEeeCC--ccc--eEEEeCCEEE
Confidence 766542 233211 232 3455566665
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.52 E-value=0.027 Score=46.23 Aligned_cols=198 Identities=12% Similarity=0.086 Sum_probs=107.3
Q ss_pred CCCCcEEEEEe--cCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC--------------CeEEEEe
Q 016982 19 SPDHAMVAFCP--NNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD--------------RNSYVWN 82 (379)
Q Consensus 19 s~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~vw~ 82 (379)
+.++..|.... .++.|+..+.+....+.+..- . +--+++++++|+.+... ..|+..+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~-----~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND-----T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE-----E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC-----c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 34666666653 245666666555432333221 1 33457889888777543 3577777
Q ss_pred ccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEE
Q 016982 83 QEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS--GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLA 160 (379)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 160 (379)
+.+.+.... . ... ...|+++++.|+... .++.-.||-++.... ..+.+ ..+.. .+++|+++.|.
T Consensus 95 ~dg~~~~~l---~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs--~~~~l-t~~~~----~~~~~~g~~iy 160 (302)
T 3s25_A 95 RNGHGSTVL---D--PDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE--EKKKI-KNHYL----FTCNTSDRYFY 160 (302)
T ss_dssp TTSCCCEEE---E--CSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC--CCEEE-ESSCC----CCSEEETTEEE
T ss_pred CCCCcceEe---e--cCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC--CeEEE-eCCCc----eEeeEECCEEE
Confidence 776652221 1 111 236777888888876 344455555544321 12333 23322 45677888887
Q ss_pred EeeC-CCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCC--CeEEEEECCCCC
Q 016982 161 TTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHN--SMIYFVDDVGPS 237 (379)
Q Consensus 161 ~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--~~i~v~d~~~~~ 237 (379)
..+. ...|.+.++. +.....+.. +... ..++|++.+|+..... ..|...++....
T Consensus 161 ~t~~g~~~Iy~~~l~-------------------g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 161 YNNPKNGQLYRYDTA-------------------SQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp EECTTTCCEEEEETT-------------------TTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred EEeCCCceEEEEECC-------------------CCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 6655 5667766651 222222211 1222 2356999998876543 367777776654
Q ss_pred ceeeeeeeecCCeeeEEEecCCcEEEEE
Q 016982 238 PLAQNVAFRDLPLRDVLFVSEKMVIGVG 265 (379)
Q Consensus 238 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 265 (379)
. +.+. ...+ ..|+|++..|.-+
T Consensus 219 ~--~~Lt--~~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 219 P--VVLT--EANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp C--EECS--CSCE--EEEEEETTEEEEE
T ss_pred e--EEEe--CCCc--ceEEECCCEEEEE
Confidence 3 3332 2223 3488888887743
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.50 E-value=0.02 Score=50.09 Aligned_cols=108 Identities=9% Similarity=0.048 Sum_probs=64.5
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEecc------CCCceEEEEEcCC---CCEEEEEeC-------
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK------HDQIVSGIDWSVR---SNRIVTVSH------- 74 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~------- 74 (379)
.....++|.|+|+++++-...+.|++++..++....+..+.. .......|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999977765444578888765554444444432 2356779999996 555544432
Q ss_pred ------CCeEEEEeccCC--ce---eeeEEeec--CCCceeEEEECCCCCEEEEEeC
Q 016982 75 ------DRNSYVWNQEGS--EW---VPTLVILR--LNRAALCVQWSPKENKFAVGSG 118 (379)
Q Consensus 75 ------d~~i~vw~~~~~--~~---~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~ 118 (379)
...|.-++...+ .. ...+.... .......|.|.|||.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 134666665432 11 11121111 1234688999999987776543
No 323
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.49 E-value=0.032 Score=46.28 Aligned_cols=192 Identities=8% Similarity=0.089 Sum_probs=112.5
Q ss_pred CCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCC----CC---EEEEEe-C--CCeEEEEEeecCCceeE
Q 016982 66 SNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPK----EN---KFAVGS-G--AKTVCICYYEQENNWWV 135 (379)
Q Consensus 66 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~-~--d~~v~i~~~~~~~~~~~ 135 (379)
..+++.....+-+.+||+ +++.+..+. .+.+..+..-|+ |+ ++++.. . +++|.+|+++.....
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~----~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-- 112 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYN----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-- 112 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEEC----CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC--
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEcc----CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc--
Confidence 356666677788999999 565444431 255666666552 22 223333 3 578999988533210
Q ss_pred EEEEee-----cCC-cCEEEEEE--cCC-Cc-EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCc
Q 016982 136 SKLIRK-----RHD-SSVTSVAW--HPN-NV-FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFS 205 (379)
Q Consensus 136 ~~~~~~-----~~~-~~v~~~~~--~p~-~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (379)
...+.. ... ..+..+++ +|. ++ ++++...+|.+..|++... ... ..+.+.+++|... +
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~----~~g-------~~~~~lVR~f~lg-s 180 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKAD----KNG-------YISGKKVRAFKMN-S 180 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEEC----TTS-------CEEEEEEEEEECS-S
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeC----CCC-------cccceEEEEecCC-C
Confidence 122200 011 45666777 664 43 6777788899999987210 000 0245667777653 4
Q ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCC----Cceeeeee-ee-cCCeeeEEEe--cCCc-EEE-EE-eCCCeEEEE
Q 016982 206 WAFGVKWSPSGNTLAYVGHNSMIYFVDDVGP----SPLAQNVA-FR-DLPLRDVLFV--SEKM-VIG-VG-FDCNPMVFA 274 (379)
Q Consensus 206 ~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~~-~~-~~~i~~~~~s--~~~~-~l~-~~-~d~~~~i~~ 274 (379)
.+-.+...+....|+.+-++..|..|+.... ..++..+. ++ ...+..|+.- ++++ +|+ ++ .++...+|+
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 6788889998888999988877777774421 12333322 11 2357778774 4555 555 44 355677777
Q ss_pred ec
Q 016982 275 AD 276 (379)
Q Consensus 275 ~~ 276 (379)
..
T Consensus 261 r~ 262 (355)
T 3amr_A 261 RQ 262 (355)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.45 E-value=0.036 Score=45.93 Aligned_cols=142 Identities=8% Similarity=0.046 Sum_probs=71.5
Q ss_pred cEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeC----CC-------eEEEEeccCCceeee
Q 016982 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSH----DR-------NSYVWNQEGSEWVPT 91 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~i~vw~~~~~~~~~~ 91 (379)
.+++.|+. .+..||..++++... .+..............++..++.|+. ++ .+.+||..+.++...
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhhcccc--ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 44555553 589999999877663 33321112222233456777777773 11 277889888876543
Q ss_pred EEeecCCCceeEEEECCCCCEEEEEeCC-------CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC
Q 016982 92 LVILRLNRAALCVQWSPKENKFAVGSGA-------KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
-...........+.+ ++..++.|+.+ ..+.+||..+.. |.....+ .........+. .++++++.|+.
T Consensus 94 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~--~~~~iyv~GG~ 167 (318)
T 2woz_A 94 PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK-WSEVKNL-PIKVYGHNVIS--HNGMIYCLGGK 167 (318)
T ss_dssp SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE-EEEECCC-SSCEESCEEEE--ETTEEEEECCE
T ss_pred CCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC-EeECCCC-CCcccccEEEE--ECCEEEEEcCC
Confidence 221111111122222 56777777753 235566655443 2222111 11111111222 36777777764
Q ss_pred ------CCeEEEEec
Q 016982 165 ------DGKCRVFST 173 (379)
Q Consensus 165 ------d~~i~v~d~ 173 (379)
-..+.+||+
T Consensus 168 ~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 168 TDDKKCTNRVFIYNP 182 (318)
T ss_dssp ESSSCBCCCEEEEET
T ss_pred CCCCCccceEEEEcC
Confidence 235888886
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.44 E-value=0.044 Score=46.69 Aligned_cols=243 Identities=13% Similarity=0.161 Sum_probs=148.2
Q ss_pred EEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEee
Q 016982 16 HAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVIL 95 (379)
Q Consensus 16 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 95 (379)
.-.+|..+.+|.=. ...+.|||+++. ..+....- ..+|.-=.|-.+. .|+..+ +..|+-|++.+.. .+...+.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K--~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s-~P~kvFd 143 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMK--SKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMFD 143 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTT--EEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSC-CCEEEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHh--hhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCC-Cchhhee
Confidence 44577777777664 579999999987 45554443 3356666775443 454444 4679999997632 2222223
Q ss_pred cC----CCceeEEEECCCCCEEEEEeC-------CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCC---cEEEE
Q 016982 96 RL----NRAALCVQWSPKENKFAVGSG-------AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNN---VFLAT 161 (379)
Q Consensus 96 ~~----~~~v~~~~~~~~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l~~ 161 (379)
.| ...|.....+++.++++..+- .|.+.+|..+.+. .+.+ .+|......+...-+. +.+..
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~i-eGhaa~F~~~~~~g~~~~~~lf~f 218 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPI-EGHAASFAQFKMEGNAEESTLFCF 218 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----EEEE-CCSEEEEEEEECTTCSSEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----cchh-eeeeeeeEEEecCCCCCCceEEEE
Confidence 33 356777778899998776542 4678888877765 5666 7887666555443221 34554
Q ss_pred eeC---CCeEEEEeccccccccccccCCCccCCcccceEEEee----cCCcceEEEEECCCCCEEEEEcCCCeEEEEECC
Q 016982 162 TST---DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLD----LSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 162 ~~~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~ 234 (379)
+.. .+.++|.++.... ...+ ...+....+. ...+-..++..++.-..+..-..-|.+++||+.
T Consensus 219 a~r~~~g~kLhi~Ei~~~~----~~~~------~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle 288 (494)
T 1bpo_A 219 AVRGQAGGKLHIIEVGTPP----TGNQ------PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (494)
T ss_dssp EECSTTCCEEEEEECSCCC----TTCC------CCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred EEecCCCcEEEEEEcCCCc----cCCC------CccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc
Confidence 444 3788888762110 0111 1112122221 123445678888887788888899999999999
Q ss_pred CCCceeeeeeeecCCeeeEEEec-CCcEEEEEeCCCeEEEEecCCCcE
Q 016982 235 GPSPLAQNVAFRDLPLRDVLFVS-EKMVIGVGFDCNPMVFAADETGIW 281 (379)
Q Consensus 235 ~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d~~~~i~~~~~~~~~ 281 (379)
++..+ ..-.-...+|..-+-.. .+-+++....|.+.-...++....
T Consensus 289 Tgt~i-~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 289 TGTCI-YMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp TCCEE-EEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred cceee-eeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 98743 44444455555444443 355666777777777776666543
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.41 E-value=0.017 Score=48.84 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=60.4
Q ss_pred CCcEEEEEec-C---------CeEEEEEecCCceEEEEEec-cCCCceEEEEEcCCCCEEEEEeCC--------------
Q 016982 21 DHAMVAFCPN-N---------NEVHIYKLIQEKWEKLHVLQ-KHDQIVSGIDWSVRSNRIVTVSHD-------------- 75 (379)
Q Consensus 21 ~~~~l~~~~~-d---------g~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-------------- 75 (379)
++++++.|+. + ..+.+||..+.+|..+..+. .......++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 5677777765 2 46899999998777765544 2111222222 456677777754
Q ss_pred -------------------------CeEEEEeccCCceeeeEEeecCCCce-eEEEECCCCCEEEEEeC------CCeEE
Q 016982 76 -------------------------RNSYVWNQEGSEWVPTLVILRLNRAA-LCVQWSPKENKFAVGSG------AKTVC 123 (379)
Q Consensus 76 -------------------------~~i~vw~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~------d~~v~ 123 (379)
..+.+||..+.++...-.. ...... .+++.. ++++++.|+. ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES-PWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC-SSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCC-CCCCcccccEEEE-CCEEEEEeeecCCCcccCceE
Confidence 5789999999887665332 211111 222222 5666677653 23466
Q ss_pred EEEe
Q 016982 124 ICYY 127 (379)
Q Consensus 124 i~~~ 127 (379)
.||+
T Consensus 221 ~~d~ 224 (357)
T 2uvk_A 221 ELDF 224 (357)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6766
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.40 E-value=0.011 Score=48.88 Aligned_cols=146 Identities=8% Similarity=0.117 Sum_probs=77.6
Q ss_pred CCCcEEEEEec----C-------CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC--------CeEEE
Q 016982 20 PDHAMVAFCPN----N-------NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD--------RNSYV 80 (379)
Q Consensus 20 ~~~~~l~~~~~----d-------g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~v 80 (379)
.++.+++.|+. + ..+.+||..++++..+..+.........+.+ ++..++.|+.+ ..+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEE
Confidence 46778888873 1 1378889988877665444322211122222 45566666632 35889
Q ss_pred EeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeC-C-----CeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC
Q 016982 81 WNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG-A-----KTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP 154 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 154 (379)
||..+.++...-.. .....-.+++. -+++.++.|+. + ..+.+||..+.. |.....+ ........++.+
T Consensus 122 ~d~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~-- 195 (315)
T 4asc_A 122 YDRLSFKWGESDPL-PYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE-WKELAPM-QTARSLFGATVH-- 195 (315)
T ss_dssp EETTTTEEEECCCC-SSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE-EEECCCC-SSCCBSCEEEEE--
T ss_pred ECCCCCcEeECCCC-CCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe-EEECCCC-CCchhceEEEEE--
Confidence 99998876544321 11111122222 35667777765 2 357777776553 3222222 111112222333
Q ss_pred CCcEEEEeeCCC-----eEEEEec
Q 016982 155 NNVFLATTSTDG-----KCRVFST 173 (379)
Q Consensus 155 ~~~~l~~~~~d~-----~i~v~d~ 173 (379)
++++++.|+.++ .+.+||+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEET
T ss_pred CCEEEEEeccCCCCccceEEEEEC
Confidence 678888887654 4777776
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.39 E-value=0.0054 Score=46.99 Aligned_cols=184 Identities=14% Similarity=0.082 Sum_probs=91.0
Q ss_pred CCEEEEEeCCCeEEEEeccCCc---eeeeEEeecC--CCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCc--e-eEEE
Q 016982 66 SNRIVTVSHDRNSYVWNQEGSE---WVPTLVILRL--NRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN--W-WVSK 137 (379)
Q Consensus 66 ~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~--~-~~~~ 137 (379)
...|+....| +++.=...++. +.......+. =..+..++|+|+|.+.++ .+|.++-.+..+... | ....
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55544443332 1111111222 246789999999997777 567655444322110 0 0012
Q ss_pred EEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCC
Q 016982 138 LIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGN 217 (379)
Q Consensus 138 ~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 217 (379)
.+-..--....++.|.|+|.+.++ .||.|.-++.-.... ..+ ......+. ...=..+..|.|.|+|.
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~------~~W---l~~a~~vg--~~gw~~~~~lff~p~G~ 147 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDT------DNW---IARATEVG--SGGWSGFKFLFFHPNGY 147 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTT------CCH---HHHSEEEE--CSSGGGEEEEEECTTSC
T ss_pred EecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCC------Cce---eccccEec--cCCCCceEEEEECCCce
Confidence 220111122578999999988877 568887665300000 000 00011111 11124578999999999
Q ss_pred EEEEEcCCCeEEEEECCCCCc-----eeeeee-eecCCeeeEEEecCCcEEEEEeCC
Q 016982 218 TLAYVGHNSMIYFVDDVGPSP-----LAQNVA-FRDLPLRDVLFVSEKMVIGVGFDC 268 (379)
Q Consensus 218 ~l~~~~~d~~i~v~d~~~~~~-----~~~~~~-~~~~~i~~~~~s~~~~~l~~~~d~ 268 (379)
+.+.. |+.++-........ ....+- ..-..-..+.|.++|.+.++. ++
T Consensus 148 Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~-~g 201 (236)
T 1tl2_A 148 LYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ-GG 201 (236)
T ss_dssp EEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE-TT
T ss_pred EEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe-CC
Confidence 88776 77754332221110 001111 111123446688888888766 54
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.38 E-value=0.034 Score=46.88 Aligned_cols=96 Identities=10% Similarity=0.085 Sum_probs=54.0
Q ss_pred CCcEEEEEec-CCeEEEEEecC--CceEEEEEec-cCCCceEEEEEcCCCCEEEEEeC-C---------CeEEEEeccCC
Q 016982 21 DHAMVAFCPN-NNEVHIYKLIQ--EKWEKLHVLQ-KHDQIVSGIDWSVRSNRIVTVSH-D---------RNSYVWNQEGS 86 (379)
Q Consensus 21 ~~~~l~~~~~-dg~i~i~~~~~--~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~vw~~~~~ 86 (379)
++++++.|+. ...+.+||..+ .+|..+..+. .......++.+ +++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 6677777764 35789999874 6677665554 22222222222 4556666665 2 35889999988
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCC
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 119 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (379)
++.......+....-.++.. .++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 76554322211111112222 467777888754
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.21 E-value=0.019 Score=47.62 Aligned_cols=147 Identities=10% Similarity=0.120 Sum_probs=76.7
Q ss_pred CCCCcEEEEEec----CC-------eEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCC-------CeEEE
Q 016982 19 SPDHAMVAFCPN----NN-------EVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHD-------RNSYV 80 (379)
Q Consensus 19 s~~~~~l~~~~~----dg-------~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~v 80 (379)
..++.+++.|+. ++ .+.+||..+.++..+..+.........+.+ +++.++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 346777888873 11 277889888877665444432222222222 46666777653 24888
Q ss_pred EeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeC------CCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC
Q 016982 81 WNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSG------AKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP 154 (379)
Q Consensus 81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 154 (379)
||..+.++...-.. .....-.++.. .++++++.|+. -..+.+||..+.. |.....+ .........+.+
T Consensus 132 yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~-- 205 (318)
T 2woz_A 132 YDPVAAKWSEVKNL-PIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD-WKDLAPM-KTPRSMFGVAIH-- 205 (318)
T ss_dssp EETTTTEEEEECCC-SSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE--
T ss_pred EeCCCCCEeECCCC-CCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE-EEECCCC-CCCcccceEEEE--
Confidence 99988876543211 11111112222 35667777764 2347777776653 3222222 111122222333
Q ss_pred CCcEEEEeeCCC-----eEEEEec
Q 016982 155 NNVFLATTSTDG-----KCRVFST 173 (379)
Q Consensus 155 ~~~~l~~~~~d~-----~i~v~d~ 173 (379)
+++.++.|+.++ .+.+||+
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEET
T ss_pred CCEEEEEcCcCCCCccceEEEEEC
Confidence 677788876532 4667775
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.19 E-value=0.03 Score=51.97 Aligned_cols=151 Identities=11% Similarity=0.118 Sum_probs=85.7
Q ss_pred CCCcEEEEEecC----CeEEEEEecCCceEEEE-Ee-----ccCCCceEEEEEcCCCCEEEEEeCC------CeEEEEec
Q 016982 20 PDHAMVAFCPNN----NEVHIYKLIQEKWEKLH-VL-----QKHDQIVSGIDWSVRSNRIVTVSHD------RNSYVWNQ 83 (379)
Q Consensus 20 ~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~-~~-----~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~vw~~ 83 (379)
.++.+++.|+.+ ..+.+||..+++|..+. .+ ......-..+.+..+++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777788753 46899999998888776 32 2111122233332267677777643 34889999
Q ss_pred cCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--eEEEEEeecCCceeEEEE---EeecCCcCEEEEEEcCC-Cc
Q 016982 84 EGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK--TVCICYYEQENNWWVSKL---IRKRHDSSVTSVAWHPN-NV 157 (379)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~p~-~~ 157 (379)
.+.++...-.. .....-.+++.-.++++++.|+.++ .+.+||..+.. |..... . ........++.+..+ ++
T Consensus 476 ~t~~W~~~~~~-p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~-p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWSMIKSL-SHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEF-FQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEEECCCC-SBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGG-GGSCCBSCEEEEETTTTE
T ss_pred CCCcEEECCCC-CCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCC-CCcccceeEEEEeCCCCE
Confidence 98876554321 1122222333324788888887654 57777776653 322221 1 111122233555554 67
Q ss_pred EEEEeeC--C-----CeEEEEec
Q 016982 158 FLATTST--D-----GKCRVFST 173 (379)
Q Consensus 158 ~l~~~~~--d-----~~i~v~d~ 173 (379)
.++.|+. + ..+.+||+
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEc
Confidence 7888876 2 35788886
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.13 E-value=0.15 Score=46.57 Aligned_cols=188 Identities=10% Similarity=0.067 Sum_probs=110.4
Q ss_pred EEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeccCCceeeeEEeecCCCcee
Q 016982 24 MVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVS-HDRNSYVWNQEGSEWVPTLVILRLNRAAL 102 (379)
Q Consensus 24 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~v~ 102 (379)
+|+.+. .+.|+..++.......+......-..+.+++|.+.+..|+.+. ..+.|+.+++.+....... ...-..+.
T Consensus 319 ~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~--~~~~~~p~ 395 (619)
T 3s94_A 319 LLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV--TAQIAHPD 395 (619)
T ss_dssp EEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CSSCSCCC
T ss_pred EEEEEc-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE--ECCCCCcC
Confidence 444443 3567777776543222211111123567899998766666555 5678999988765422222 22235677
Q ss_pred EEEECCCCC-EEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee--CCCeEEEEeccccccc
Q 016982 103 CVQWSPKEN-KFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS--TDGKCRVFSTFIKGVD 179 (379)
Q Consensus 103 ~~~~~~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~--~d~~i~v~d~~~~~~~ 179 (379)
.+++.+.+. ++++-+..+.|.+.+++... .+.+....-....++++.|....|.... ..+.|...++.
T Consensus 396 GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~----~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d----- 466 (619)
T 3s94_A 396 GIAVDWVARNLYWTDTGTDRIEVTRLNGTM----RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD----- 466 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-----
T ss_pred ceEEecccCcEEEEeCCCCcEEEEeCCCCe----EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-----
Confidence 889987444 44554557889888776554 2333233445678999999744444333 23556655541
Q ss_pred cccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCC
Q 016982 180 IKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPS 237 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~ 237 (379)
+.....+ ...-...+.|++++++..|..+. ..+.|..+++....
T Consensus 467 --------------G~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 467 --------------GSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG 512 (619)
T ss_dssp --------------SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred --------------CCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc
Confidence 2222222 22234678999999777777664 45789999986654
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.89 E-value=0.063 Score=52.95 Aligned_cols=244 Identities=12% Similarity=0.153 Sum_probs=137.8
Q ss_pred eCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecC
Q 016982 18 WSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRL 97 (379)
Q Consensus 18 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~ 97 (379)
.+|..+.+|.=. ..++.|||+++. ..+....- ..+|.-=.|-.+. .|+..+ +..|.-|++.+.. .+...+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k--~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s-~P~k~fdR~ 145 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMK--SKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGES-QPVKMFDRH 145 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHh--hhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCC-ccHHHHhcc
Confidence 467777776654 579999999886 33333332 3456667775443 343333 3579999997532 122111222
Q ss_pred ----CCceeEEEECCCCCEEEEEe-------CCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcC--C-CcEEEEee
Q 016982 98 ----NRAALCVQWSPKENKFAVGS-------GAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHP--N-NVFLATTS 163 (379)
Q Consensus 98 ----~~~v~~~~~~~~~~~l~~~~-------~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~-~~~l~~~~ 163 (379)
...|..-..+++.++++..+ -.|.+.+|..+.+. .+.+ .+|.+....+...- . .+.+..+.
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----sQ~i-egha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPI-EGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----chhh-hHhHhhhheeccCCCCCCceEEEEEE
Confidence 35677777788888877544 35788898887764 4555 66765554444321 1 23333332
Q ss_pred C---CCeEEEEeccccccccccccCCCccCCcccceEEEe---ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCC
Q 016982 164 T---DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL---DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPS 237 (379)
Q Consensus 164 ~---d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~ 237 (379)
. .+.++|.++.... .+.+++ ..+.+..+ .....-..++..++.-..+..-..-|.+++||+.++.
T Consensus 221 ~~~~g~kLhi~Ei~~~~----~~~~~f-----~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPP----TGNQPF-----PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred ecCCCceEEEEecCCCc----cCCCCC-----ccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence 2 3688888762110 011110 01111111 1113334577888877777777889999999999986
Q ss_pred ceeeeeeeecCCeeeEEEe-cCCcEEEEEeCCCeEEEEecCCCcEEE
Q 016982 238 PLAQNVAFRDLPLRDVLFV-SEKMVIGVGFDCNPMVFAADETGIWTF 283 (379)
Q Consensus 238 ~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~d~~~~i~~~~~~~~~~~ 283 (379)
.+ ..-.....+|.-.+-. +.+-+++....|.+.-...++.....+
T Consensus 292 ~i-~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~y 337 (1630)
T 1xi4_A 292 CI-YMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (1630)
T ss_pred hh-hhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhhh
Confidence 43 2222334444433333 345566677777777666666554443
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.78 E-value=0.19 Score=41.98 Aligned_cols=115 Identities=11% Similarity=0.048 Sum_probs=65.2
Q ss_pred EeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEe----ecCCCceeEEEECCC---CCEEEEE-e--C
Q 016982 49 VLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVI----LRLNRAALCVQWSPK---ENKFAVG-S--G 118 (379)
Q Consensus 49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~-~--~ 118 (379)
.+...-.....|+|.|+|+++++--..|.|++++..+++......+ .........|+++|+ +..|.+. + .
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3333344568999999998777655489999998766553222111 123456789999995 3344332 2 3
Q ss_pred CCeEEEEEeecCC--------ceeEEEEEeecCCcCEEEEEEcCCCcEEEEee
Q 016982 119 AKTVCICYYEQEN--------NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 119 d~~v~i~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~ 163 (379)
++.|.-|.+.... ...+...+.......-..+.|.|||.++++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 3445445544311 11111222111122346799999998877755
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.73 E-value=0.071 Score=49.50 Aligned_cols=152 Identities=9% Similarity=0.123 Sum_probs=87.4
Q ss_pred CCcEEEEEecC------CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCC--eEEEEeccCCceeeeE
Q 016982 21 DHAMVAFCPNN------NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDR--NSYVWNQEGSEWVPTL 92 (379)
Q Consensus 21 ~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~ 92 (379)
++++++.|+.+ ..+.+||..+++|..+..+...... .+++...+++.++.|+.++ .+.+||..+.++...-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 67788888753 3588999999877776555432222 2333324677888887554 6999999998765543
Q ss_pred E---eecCCCceeEEEECCC-CCEEEEEeC--C-----CeEEEEEeecCCc-----eeEEEEEeecCCcCEEEEEEcCCC
Q 016982 93 V---ILRLNRAALCVQWSPK-ENKFAVGSG--A-----KTVCICYYEQENN-----WWVSKLIRKRHDSSVTSVAWHPNN 156 (379)
Q Consensus 93 ~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~v~i~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~p~~ 156 (379)
. ..........+.+..+ ++.++.|+. + ..+..||+.+..- |................+ ...++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~ 608 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPR 608 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETT
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCC
Confidence 2 1111122233555554 667777765 2 4578888877761 322222100111222223 33337
Q ss_pred cEEEEeeCC--------CeEEEEecc
Q 016982 157 VFLATTSTD--------GKCRVFSTF 174 (379)
Q Consensus 157 ~~l~~~~~d--------~~i~v~d~~ 174 (379)
++++.|+.+ ..+.+||+.
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EEEEECCccCCCCCCCCCeEEEEECC
Confidence 888888743 458888863
No 336
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.71 E-value=0.21 Score=41.80 Aligned_cols=198 Identities=12% Similarity=0.118 Sum_probs=112.0
Q ss_pred ceeEEEeCCCCcEEEEEe------------cCCeEEEEEecCC--ceEEEEEecc-----CCCceEEEEEcC--CCC-EE
Q 016982 12 CITCHAWSPDHAMVAFCP------------NNNEVHIYKLIQE--KWEKLHVLQK-----HDQIVSGIDWSV--RSN-RI 69 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~------------~dg~i~i~~~~~~--~~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l 69 (379)
....+...|+|..+++++ .+|.|.++|.++. +.+.+. +.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345677788876555542 6899999998743 223332 222 223566777765 353 45
Q ss_pred EEEe-C--CCeEEEEeccCCc-eeeeEEeecC--CCceeEEEECCCCCEEEEEeC---C------------CeEEEEEee
Q 016982 70 VTVS-H--DRNSYVWNQEGSE-WVPTLVILRL--NRAALCVQWSPKENKFAVGSG---A------------KTVCICYYE 128 (379)
Q Consensus 70 ~~~~-~--d~~i~vw~~~~~~-~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~---d------------~~v~i~~~~ 128 (379)
+.+. . +.++.+|+++.+. ....+....+ -....++.+.++|.+.++... | ..=.+|.++
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 4443 2 4678888776542 1111211111 245788999999987776541 1 223444454
Q ss_pred cCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEee-CCCeEEEEeccccccccccccCCCccCCcccc--eEEEeecCCc
Q 016982 129 QENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTS-TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE--QILQLDLSFS 205 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 205 (379)
.++ .+.+ ...-..-+.++|+||++.|..+. ..+.|..|++. ..+. ....+. ..+
T Consensus 210 ~~~----~~~~-~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~-----------------~~g~l~~~~~~~-~~g 266 (355)
T 3sre_A 210 PND----VRVV-AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH-----------------ANWTLTPLRVLS-FDT 266 (355)
T ss_dssp TTC----CEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC-----------------TTSCEEEEEEEE-CSS
T ss_pred CCe----EEEe-ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC-----------------CCCcEecCEEEe-CCC
Confidence 443 2222 22234568999999997766654 57889999872 1111 112232 245
Q ss_pred ceEEEEECC-CCCEEEEEcCC-CeEEEEEC
Q 016982 206 WAFGVKWSP-SGNTLAYVGHN-SMIYFVDD 233 (379)
Q Consensus 206 ~v~~~~~sp-~~~~l~~~~~d-~~i~v~d~ 233 (379)
..-.+++++ +|++.+++..+ +.|..|+.
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 678899999 59987766533 34444443
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.71 E-value=0.014 Score=44.74 Aligned_cols=109 Identities=11% Similarity=0.044 Sum_probs=62.5
Q ss_pred cCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeec-CCcceEEEEECCCCCEEEEEc
Q 016982 145 SSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDL-SFSWAFGVKWSPSGNTLAYVG 223 (379)
Q Consensus 145 ~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~ 223 (379)
..+.+++|+|++.+.++ .+|.+.-.+...... +.-.+. -..+-. --.....+.|.|+|.+.++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~-----------~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav-- 104 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN-----------DNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV-- 104 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTT-----------CCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCc-----------cccccc-ccEecccccccceEEEECCCCCEEEe--
Confidence 46789999999987776 677655443200000 000011 111100 0111478999999998877
Q ss_pred CCCeEEEEECCCCCcee-----eee-eeecCCeeeEEEecCCcEEEEEeCCCe
Q 016982 224 HNSMIYFVDDVGPSPLA-----QNV-AFRDLPLRDVLFVSEKMVIGVGFDCNP 270 (379)
Q Consensus 224 ~d~~i~v~d~~~~~~~~-----~~~-~~~~~~i~~~~~s~~~~~l~~~~d~~~ 270 (379)
.||.|+-++-.+...-. ..+ ..--..+..+.|.|+|.+.++. |+.+
T Consensus 105 ~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 105 SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 56988877753322110 011 0011457889999999999988 7763
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.48 E-value=0.32 Score=40.92 Aligned_cols=108 Identities=6% Similarity=0.017 Sum_probs=58.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEE-----eecCCCceeEEEECCC---CCEEEEEe-C-------C
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLV-----ILRLNRAALCVQWSPK---ENKFAVGS-G-------A 119 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~---~~~l~~~~-~-------d 119 (379)
....|+|.|+|+.|+.+...+.|++++.. +.....+. ..........++++|+ +..|.+.. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45799999999834455677999998853 32111110 0112345689999996 44444442 2 1
Q ss_pred CeEEEEEeecCC-ceeEEEEEeec------CCcCEEEEEEcCCCcEEEEeeC
Q 016982 120 KTVCICYYEQEN-NWWVSKLIRKR------HDSSVTSVAWHPNNVFLATTST 164 (379)
Q Consensus 120 ~~v~i~~~~~~~-~~~~~~~~~~~------~~~~v~~~~~~p~~~~l~~~~~ 164 (379)
..|..+++.... .....+.+... ....-..+.|.|||.++++.+.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 245555554331 11111211111 1112357999999976666543
No 339
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.34 E-value=0.92 Score=44.76 Aligned_cols=222 Identities=9% Similarity=0.038 Sum_probs=118.0
Q ss_pred ceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCC------CCEEEEEeC-CCeEEEEecc
Q 016982 12 CITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVR------SNRIVTVSH-DRNSYVWNQE 84 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~-d~~i~vw~~~ 84 (379)
.|...+.+. .+++.+. ++.+.++++..++........ -...|.|+++.|. +++++.|.. |++++++++.
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 455555442 4566654 578888888866444443333 3568999999863 368899886 9999999998
Q ss_pred CCceeeeEEeecCCCceeEEEEC--CCCCEEEEEeCCCeEEEEEeecC--CceeEEEEEeecCCcCEEEEEEcCCCcEEE
Q 016982 85 GSEWVPTLVILRLNRAALCVQWS--PKENKFAVGSGAKTVCICYYEQE--NNWWVSKLIRKRHDSSVTSVAWHPNNVFLA 160 (379)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 160 (379)
+.+......+. ....+.++.+. ....+|.+|-.||.+.-+.++.. ......... .+ ..++.-..+...+..-+
T Consensus 591 ~l~~~~~~~L~-~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~-LG-~~pv~L~~~~~~~~~~V 667 (1158)
T 3ei3_A 591 SFELLHKEMLG-GEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT-LG-TQPTVLRTFRSLSTTNV 667 (1158)
T ss_dssp TCCEEEEEECC-SSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE-CC-SSCCEEEEEESSSCEEE
T ss_pred CCCeEEEEECC-CCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE-cC-CCceEEEEEeeCCceeE
Confidence 76644433321 12233444433 23457889999999877766542 211111112 23 23444444443443222
Q ss_pred EeeCCCeEEEEeccccccccccccCCCccCCcccceEE-EeecCCcce-EEEEECCC--CCEEEEEcCCCeEEEEECCCC
Q 016982 161 TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQIL-QLDLSFSWA-FGVKWSPS--GNTLAYVGHNSMIYFVDDVGP 236 (379)
Q Consensus 161 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v-~~~~~sp~--~~~l~~~~~d~~i~v~d~~~~ 236 (379)
.+..+....+|.- .+.... .+.. ..+ ....|+.. ..-++..+ ++.++|..+...
T Consensus 668 ~a~s~rp~liy~~-------------------~~~l~~s~l~~--~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~ 725 (1158)
T 3ei3_A 668 FACSDRPTVIYSS-------------------NHKLVFSNVNL--KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEI 725 (1158)
T ss_dssp EEESSSCEEEEES-------------------SSSEEEEEBSS--SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCS
T ss_pred EEECCCCEEEEEc-------------------CCceEEeccCh--HHhceEeccCcccCCCcEEEEc-CCceEEEEeccc
Confidence 2233444444431 111111 1111 112 22334331 22344443 456888877543
Q ss_pred Cce-eeeeeeecCCeeeEEEecCCcEEE
Q 016982 237 SPL-AQNVAFRDLPLRDVLFVSEKMVIG 263 (379)
Q Consensus 237 ~~~-~~~~~~~~~~i~~~~~s~~~~~l~ 263 (379)
... ++.+. -+..+..++++|+.+.++
T Consensus 726 ~~~~~~~ip-L~~Tprri~y~~~~~~~~ 752 (1158)
T 3ei3_A 726 QKLHIRTVP-LYESPRKICYQEVSQCFG 752 (1158)
T ss_dssp SSEEEEEEE-CSSEEEEEEEEGGGTEEE
T ss_pred CCeeEEEEe-CCCCceEEEEcCCCCEEE
Confidence 322 22232 356788999999777554
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.37 E-value=1.3 Score=38.76 Aligned_cols=108 Identities=8% Similarity=-0.005 Sum_probs=59.8
Q ss_pred cceeEEEeCCCCc-EEEEEecCCeEEEEEecCCc-eEEEEEec---------cCCCceEEEEEcCC----CCEEEEEeC-
Q 016982 11 QCITCHAWSPDHA-MVAFCPNNNEVHIYKLIQEK-WEKLHVLQ---------KHDQIVSGIDWSVR----SNRIVTVSH- 74 (379)
Q Consensus 11 ~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~-~~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~- 74 (379)
...+.|+|.|+|. +|+++...|.|++++..... ...+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567899999996 45555678999999754321 01112221 11346788999996 333333221
Q ss_pred -C----------CeEEEEeccCC--------ceeeeEEee--cCCCceeEEEECCCCCEEEEEeC
Q 016982 75 -D----------RNSYVWNQEGS--------EWVPTLVIL--RLNRAALCVQWSPKENKFAVGSG 118 (379)
Q Consensus 75 -d----------~~i~vw~~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 118 (379)
+ ..|.-|.+..+ .....+... ........|.|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444655421 111122211 11234578999999987776654
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.27 E-value=0.54 Score=39.06 Aligned_cols=108 Identities=11% Similarity=0.042 Sum_probs=63.7
Q ss_pred cEEEEEecCCeEEEEEecCCceEEEEEeccC-CCceEEEEE--cCCCCEEEEE--eCCCeEEEEeccCCceeeeEEeec-
Q 016982 23 AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKH-DQIVSGIDW--SVRSNRIVTV--SHDRNSYVWNQEGSEWVPTLVILR- 96 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~~~--~~d~~i~vw~~~~~~~~~~~~~~~- 96 (379)
.++++++.||.|+-+|..++ +....+... ..++....- .+.+..++.+ +.||.|..++..++.....+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG--~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG--HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT--EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCC--cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 47888899999999999888 566666543 122222110 0112234433 579999999988875443332211
Q ss_pred -CCCceeE---EEE-C----CCCCEEEEEeCCCeEEEEEeecCCc
Q 016982 97 -LNRAALC---VQW-S----PKENKFAVGSGAKTVCICYYEQENN 132 (379)
Q Consensus 97 -~~~~v~~---~~~-~----~~~~~l~~~~~d~~v~i~~~~~~~~ 132 (379)
...++.. ... . ..+..+++|+.++.+...|..+++.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 1111111 000 0 0356788999999999989888873
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.19 Score=41.72 Aligned_cols=187 Identities=11% Similarity=-0.022 Sum_probs=91.9
Q ss_pred CEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEEC--C-CCCEEEEE-eCCCeEEEEEeecCCceeEEEEEe-e
Q 016982 67 NRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWS--P-KENKFAVG-SGAKTVCICYYEQENNWWVSKLIR-K 141 (379)
Q Consensus 67 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~-~ 141 (379)
..++.++.||.|.-+|..+|+..-.+... ...++....-. + ++..++.. +.||.|..++..++.... ...+. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~-~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL-PLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE-EEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe-eeccccc
Confidence 46788899999999999999755544321 11222221100 1 22333343 578999888876553110 00000 0
Q ss_pred cCCcCEEE---EEE-c----CCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCC--cc-----
Q 016982 142 RHDSSVTS---VAW-H----PNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSF--SW----- 206 (379)
Q Consensus 142 ~~~~~v~~---~~~-~----p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----- 206 (379)
....++.. ... . -.+..+++|+.+|.+...|+ .+++.+.++.... +.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~------------------~tG~~~W~~~~~~~~~~~~~~~ 150 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINM------------------LNGEIISAFGPGSKNGYFGSQS 150 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEET------------------TTCCEEEEESTTCBCC------
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEEC------------------CCCcEEEEEecCCCcccccccc
Confidence 11122221 000 0 03567888999999999986 6777776664321 10
Q ss_pred eEEEEEC-----CCCCEEEEEcCCCeEEEEECCCCCceeeeeee--e-cCCee-----eEEEecCCcEEEEEeCCCeEEE
Q 016982 207 AFGVKWS-----PSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF--R-DLPLR-----DVLFVSEKMVIGVGFDCNPMVF 273 (379)
Q Consensus 207 v~~~~~s-----p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~-~~~i~-----~~~~s~~~~~l~~~~d~~~~i~ 273 (379)
..+.... ..+..|+.+..+..+.+.+ +++. . ..... . ...+. +-..+.|+.++++..|+.+..+
T Consensus 151 e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~-W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~ 227 (339)
T 2be1_A 151 VDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-S-YNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLAS 227 (339)
T ss_dssp --------------CCEEEEEEEEEECEECC-TTSC-C-CCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEE
T ss_pred cccccccccccccCCCeEEEecceEEEEEEC-CCCC-e-EEEecccccccccccccccccccccCCcEEEECCCCEEEEE
Confidence 0011110 1245677777777777766 3332 1 11110 0 00000 0111234666667777777666
Q ss_pred Eec
Q 016982 274 AAD 276 (379)
Q Consensus 274 ~~~ 276 (379)
+..
T Consensus 228 d~~ 230 (339)
T 2be1_A 228 DLD 230 (339)
T ss_dssp CST
T ss_pred ECC
Confidence 654
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.22 E-value=2.1 Score=40.27 Aligned_cols=224 Identities=11% Similarity=0.068 Sum_probs=124.4
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..|.++....+|. |-.|+.+ -+..||..+..+.. ........|.++.. .++ .|..++.+ -+..++..+++...
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~-Gl~~yd~~~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDN-GILVYNYRADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETT-EEEEEETTTTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEE
T ss_pred ceEEEEEEcCCCc-EEEEeCC-CeEEEeCCCCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEE
Confidence 4688887777664 5556555 47899988763322 11112235776654 345 45556655 58888987765322
Q ss_pred eEEe--ecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeec-----CCcCEEEEEEcCCCcEEEEee
Q 016982 91 TLVI--LRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKR-----HDSSVTSVAWHPNNVFLATTS 163 (379)
Q Consensus 91 ~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~l~~~~ 163 (379)
.... ......|.++....++.+.+ ++.+ -+..++..... ...+... ....|.++...+++..|-.|+
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGK----FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTE----EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCc----eEEecCCCccccccceeEEEEEECCCCEEEEEE
Confidence 1000 01234678888877777554 4544 46666654443 1222111 123488888877666544455
Q ss_pred CCCeEEEEeccccccccccccCCCccCCcccceEEEe-ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeee
Q 016982 164 TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQN 242 (379)
Q Consensus 164 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 242 (379)
. +-+..+|. .+.+ +..+ ......|.++...++|.+.+.. . +-+.+++..+.. . ..
T Consensus 210 ~-~Gl~~~~~------------------~~~~-~~~~~~l~~~~i~~i~~d~~g~lWigT-~-~Gl~~~~~~~~~-~-~~ 265 (758)
T 3ott_A 210 E-GYLFQYFP------------------STGQ-IKQTEAFHNNSIKSLALDGNGDLLAGT-D-NGLYVYHNDTTP-L-QH 265 (758)
T ss_dssp E-EEEEEEET------------------TTTE-EEEEEEEEEEEEEEEEECTTCCEEEEE-T-TEEEEECCTTSC-C-EE
T ss_pred C-CCCeEEcC------------------CCCe-EEeccCCCCCeEEEEEEcCCCCEEEEe-C-CceeEEecCCCc-E-EE
Confidence 4 45777875 1221 1111 1113458888888888866543 3 457888866543 1 22
Q ss_pred ee--------eecCCeeeEEEecCCcEEEEEeCCCeEE
Q 016982 243 VA--------FRDLPLRDVLFVSEKMVIGVGFDCNPMV 272 (379)
Q Consensus 243 ~~--------~~~~~i~~~~~s~~~~~l~~~~d~~~~i 272 (379)
+. .....|.++....+|.+.++...| +.+
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~ 302 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISL 302 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEE
T ss_pred EEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccc
Confidence 21 112347888888888877766544 543
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.19 E-value=1.2 Score=44.48 Aligned_cols=143 Identities=13% Similarity=0.018 Sum_probs=86.1
Q ss_pred CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCC
Q 016982 76 RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPN 155 (379)
Q Consensus 76 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 155 (379)
.+|.|-|+..+..+.+ .+-..-+...+|..+.+|.-. ..++.|+|+++... .+.. ....+|.-=.|-.+
T Consensus 48 ~~vvIidl~~~~~~~r-----rpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~k---lks~--~~~e~VvfWkWis~ 116 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIR-----RPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSK---MKAH--TMTDDVTFWKWISL 116 (1630)
T ss_pred ceEEEEECCCCCCccc-----ccccchhhccCCCcceEEEec-CCeEEEeehHHhhh---hccc--ccCCCceEEEecCC
Confidence 4688888887652211 122233455788888777765 68899999988763 2222 23456666677644
Q ss_pred CcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecC----CcceEEEEECCCCCEEEEEc-------C
Q 016982 156 NVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLS----FSWAFGVKWSPSGNTLAYVG-------H 224 (379)
Q Consensus 156 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~-------~ 224 (379)
+.|+..+ +..|..|++.. ...+++.|..| ...|..-..+++.++++..+ -
T Consensus 117 -~~l~lVT-~~aVyHW~~~~-----------------~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v 177 (1630)
T 1xi4_A 117 -NTVALVT-DNAVYHWSMEG-----------------ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (1630)
T ss_pred -CeeEEEc-CCeEEEeccCC-----------------CCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcc
Confidence 3444443 45799999731 12222223222 34577777788888877543 3
Q ss_pred CCeEEEEECCCCCceeeeeeeecCCe
Q 016982 225 NSMIYFVDDVGPSPLAQNVAFRDLPL 250 (379)
Q Consensus 225 d~~i~v~d~~~~~~~~~~~~~~~~~i 250 (379)
.|.+.+|...... .+.+.+|-...
T Consensus 178 ~G~mQLyS~er~~--sQ~iegha~~F 201 (1630)
T 1xi4_A 178 VGAMQLYSVDRKV--SQPIEGHAASF 201 (1630)
T ss_pred cceeeeeeccccc--chhhhHhHhhh
Confidence 4789999876643 35666665443
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.96 E-value=1.5 Score=37.33 Aligned_cols=155 Identities=12% Similarity=0.124 Sum_probs=75.0
Q ss_pred CcceeEEEeCC--CCcEEEEEecCC----eEEEEEecCCceEEEEE---ecc--------CCCceEEEEEcCC--CCEEE
Q 016982 10 AQCITCHAWSP--DHAMVAFCPNNN----EVHIYKLIQEKWEKLHV---LQK--------HDQIVSGIDWSVR--SNRIV 70 (379)
Q Consensus 10 ~~~i~~~~~s~--~~~~l~~~~~dg----~i~i~~~~~~~~~~~~~---~~~--------~~~~v~~~~~~~~--~~~l~ 70 (379)
...|.+|++.| .+.+.+ ++..| .|...+-....++.+.. +.. ....|.++++.|. ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEE-EecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35799999998 444444 44444 34433222233444321 111 1125778999872 45566
Q ss_pred EEeCCCeEEEEeccCCceeeeEEee----------------cCCCceeEEEECCC-CCEEEEEeCCCeEEEEEeecCCce
Q 016982 71 TVSHDRNSYVWNQEGSEWVPTLVIL----------------RLNRAALCVQWSPK-ENKFAVGSGAKTVCICYYEQENNW 133 (379)
Q Consensus 71 ~~~~d~~i~vw~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~ 133 (379)
.+...+.|...+-....+....... .....+.+|.+.|. ...+.++..++.|... .+.+..|
T Consensus 133 ~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s-~DgG~tW 211 (394)
T 3b7f_A 133 AGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES-TDAGTDW 211 (394)
T ss_dssp EEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE-SSTTSSC
T ss_pred EEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE-CCCCCCc
Confidence 6555565555432223332221000 11235788999883 4455555544544332 2233333
Q ss_pred eEEEE-EeecC--------CcCEEEEEEcCC-CcEEEEeeCCC
Q 016982 134 WVSKL-IRKRH--------DSSVTSVAWHPN-NVFLATTSTDG 166 (379)
Q Consensus 134 ~~~~~-~~~~~--------~~~v~~~~~~p~-~~~l~~~~~d~ 166 (379)
..... ....+ ...+.++.++|. ...|..+...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 22110 00000 134889999986 35566665444
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.90 E-value=1.9 Score=38.26 Aligned_cols=245 Identities=11% Similarity=0.042 Sum_probs=134.5
Q ss_pred EEEEecCCeEEEEEecCCceEEEEEeccCC-------------------------CceE--EEEEc---CCCCEEEEEe-
Q 016982 25 VAFCPNNNEVHIYKLIQEKWEKLHVLQKHD-------------------------QIVS--GIDWS---VRSNRIVTVS- 73 (379)
Q Consensus 25 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-------------------------~~v~--~~~~~---~~~~~l~~~~- 73 (379)
|.+|+..|.|+|+-+.+. +.+..+.-.. +... .+++. -||++|+.-.
T Consensus 73 f~SgG~sG~v~v~G~PSm--R~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdk 150 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSM--RELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDK 150 (638)
T ss_dssp EEECGGGCCEEEEEETTT--EEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEET
T ss_pred EeecCcCceEEEEecCCc--ceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecC
Confidence 678889999999999886 4544432110 1111 22332 2467777766
Q ss_pred CCCeEEEEeccCCceeeeEEeecCCCceeEEEEC--CCCCEEEEEeC-------CCeEEEEEeecCCceeEEEEEeecC-
Q 016982 74 HDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWS--PKENKFAVGSG-------AKTVCICYYEQENNWWVSKLIRKRH- 143 (379)
Q Consensus 74 ~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~~~~- 143 (379)
.+..|..-+++..++...+. .+....+..++|- |+..+++.+++ ||.. ..++..+...+...+ ...
T Consensus 151 an~RvAri~l~~~~~d~Ii~-iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~~f~~i-D~~t 226 (638)
T 3sbq_A 151 ANSRVARIRLDIMKCDKMIT-VPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYTMYNAI-DAET 226 (638)
T ss_dssp TTTEEEEEETTTTEEEEEEE-CTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEEEEEEE-ETTT
T ss_pred CCcceEEEECCcEeeceeEe-CCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhceEEEEE-cCCc
Confidence 45678888888888766665 4566788888886 67778888765 2221 000111111011111 111
Q ss_pred ---------CcCEEEEEEcCCCcEEEEeeCCC---------------eEEEEeccccccccccc-----c--CCCccCCc
Q 016982 144 ---------DSSVTSVAWHPNNVFLATTSTDG---------------KCRVFSTFIKGVDIKEK-----K--EGTSSDTK 192 (379)
Q Consensus 144 ---------~~~v~~~~~~p~~~~l~~~~~d~---------------~i~v~d~~~~~~~~~~~-----~--~~~~~~~~ 192 (379)
.+....+...+++++.++.+.+. .+.++|...-+.-.+.. . .....+.+
T Consensus 227 m~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~ 306 (638)
T 3sbq_A 227 MEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGR 306 (638)
T ss_dssp CSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECS
T ss_pred cEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccc
Confidence 12223345567777877765432 36677754211001110 0 01111111
Q ss_pred c----c-ceEEEeecCCcceEEEEECCCCCEEEEEc-CCCeEEEEECCCCC-----------c-eeeeeeeecCCeeeEE
Q 016982 193 F----G-EQILQLDLSFSWAFGVKWSPSGNTLAYVG-HNSMIYFVDDVGPS-----------P-LAQNVAFRDLPLRDVL 254 (379)
Q Consensus 193 ~----~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~v~d~~~~~-----------~-~~~~~~~~~~~i~~~~ 254 (379)
. + ....-+.. ......+..+|||++++.++ .+.++.++|+.+-. . +..... -+......+
T Consensus 307 ~~~~~~~~~~~~iP~-pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~ 384 (638)
T 3sbq_A 307 KKDGKDSKFTRYVPV-PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTT 384 (638)
T ss_dssp CBTTBCCSSEEEEEE-SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEE
T ss_pred cccccCCceEEEEeC-CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEE
Confidence 1 1 11222222 23356789999999988776 57899999987421 1 112222 244567899
Q ss_pred EecCCcEEEEE-eCCCeEEEEecC
Q 016982 255 FVSEKMVIGVG-FDCNPMVFAADE 277 (379)
Q Consensus 255 ~s~~~~~l~~~-~d~~~~i~~~~~ 277 (379)
|.++|....+- -|..+.-|+.+.
T Consensus 385 Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 385 FDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp ECSSSEEEEEETTTTEEEEEEHHH
T ss_pred ECCCCceEeeeeecceEEEEeccH
Confidence 99999544433 577888888653
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.20 E-value=2.9 Score=37.21 Aligned_cols=203 Identities=9% Similarity=0.035 Sum_probs=107.1
Q ss_pred CCcEEEEEe-cCCeEEEEEecCCceEEEEEeccCCCceEEEEEc--CCCCEEEEEeC-------CCeE---------EEE
Q 016982 21 DHAMVAFCP-NNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWS--VRSNRIVTVSH-------DRNS---------YVW 81 (379)
Q Consensus 21 ~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------d~~i---------~vw 81 (379)
||++|+.-. .+..|-..+++.-+...+..++ ....+..++|- |+..+++.++. ||.. .+|
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iP-n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f 219 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVP-NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMY 219 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECT-TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCC-CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEE
Confidence 667777765 3667878888775434444444 34578888886 67788887764 2221 111
Q ss_pred ---eccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCC---------------CeEEEEEe----------------
Q 016982 82 ---NQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA---------------KTVCICYY---------------- 127 (379)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------~~v~i~~~---------------- 127 (379)
|.++.+....+.. .+....+...+++.+.++.+.+ ..+.++|+
T Consensus 220 ~~iD~~tm~v~~Qv~v---~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 220 NAIDAETMEMAFQVIV---DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp EEEETTTCSEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred EEEcCCccEEEEEEEc---CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 1122221111111 2233344556677777766521 11333333
Q ss_pred ---------ecCC--ceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeC-CCeEEEEeccccccccccccCCCccCCcccc
Q 016982 128 ---------EQEN--NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTST-DGKCRVFSTFIKGVDIKEKKEGTSSDTKFGE 195 (379)
Q Consensus 128 ---------~~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (379)
+... .......+ .-......+..+|||++++.++. +.++.++|+.-...-+.. . .......
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~i--P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~-k----~~~~~~~ 369 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYV--PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAG-K----LADPRDV 369 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEE--EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTT-C----CSCGGGG
T ss_pred CCCeeEEccccccccCCceEEEE--eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhc-c----ccCcccc
Confidence 2200 00011111 12223457889999998887664 789999997311000000 0 0001112
Q ss_pred eEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCC
Q 016982 196 QILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 196 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~ 235 (379)
.+...+. .-.....+|.++|....+---|..|.-|++..
T Consensus 370 ~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 370 IVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred eEeeccC-CCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 2233332 33467889999996555666899999999754
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.94 E-value=5.2 Score=33.94 Aligned_cols=144 Identities=9% Similarity=0.127 Sum_probs=69.5
Q ss_pred cEEEEEecCCeEEEEEecC--CceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCC----eEEEEeccCCceeeeEEe-
Q 016982 23 AMVAFCPNNNEVHIYKLIQ--EKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDR----NSYVWNQEGSEWVPTLVI- 94 (379)
Q Consensus 23 ~~l~~~~~dg~i~i~~~~~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~----~i~vw~~~~~~~~~~~~~- 94 (379)
..|.+|+..| +.+++... ..+...... .....|.+|++.| +...|..+...+ .|...+-....+......
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccc
Confidence 4566777766 66666543 346554322 2245799999998 233444444444 344332222222221100
Q ss_pred --ec--------CCCceeEEEECC-C-CCEEEEEeCCCeEEEEEeecCCceeEEEEEee----------------cCCcC
Q 016982 95 --LR--------LNRAALCVQWSP-K-ENKFAVGSGAKTVCICYYEQENNWWVSKLIRK----------------RHDSS 146 (379)
Q Consensus 95 --~~--------~~~~v~~~~~~~-~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~----------------~~~~~ 146 (379)
.. ....|.++++.| + ...+.++...+.|... -+.+..|...... . .....
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S-~DgG~tW~~~~~~-~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS-TDHGASWEPVAGF-NDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE-SSTTSBCEECHHH-HTCTTHHHHHCCC----CCCCE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE-cCCCCCeEECcCc-cCCccccccccccccCCCCCCc
Confidence 00 112577888987 2 4556666555555332 1233333322111 0 01235
Q ss_pred EEEEEEcCC-CcEEEEeeCCCeEEE
Q 016982 147 VTSVAWHPN-NVFLATTSTDGKCRV 170 (379)
Q Consensus 147 v~~~~~~p~-~~~l~~~~~d~~i~v 170 (379)
+.++.++|. ...+..+..++.|..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEE
Confidence 788999884 344444544444443
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.06 E-value=6.4 Score=31.65 Aligned_cols=223 Identities=9% Similarity=-0.049 Sum_probs=110.9
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceee
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVP 90 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 90 (379)
..|..++.... ..++. . ||.|+.|-..... +. -........|..++..... .++. . ||.|..|-........
T Consensus 24 ~~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~G-ql-g~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGYF-HGLAL-K-GGKVLGWGANLNG-QL-TMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECSS-EEEEE-E-TTEEEEEECCSSS-TT-SCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCC-CC-CCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC
Confidence 35777776543 23333 4 8999999765421 00 0001112356667665433 2333 4 8999999765432111
Q ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEE
Q 016982 91 TLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRV 170 (379)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v 170 (379)
. ...-...|..++...+ ..+.-. +|.|+.|-.+...... .. ......|..++.-.. +.+.-. ||.+..
T Consensus 96 ~--P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg--~~--~~~~~~i~~i~~G~~--~~~~l~-~G~v~~ 163 (282)
T 3qhy_B 96 V--PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT--VP--AEAQSGVTALDGGVY--TALAVK-NGGVIA 163 (282)
T ss_dssp C--CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS--CC--GGGGSSEEEEEECSS--EEEEEE-TTEEEE
T ss_pred C--CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC--CC--ccCCCCeEEEEcccC--EEEEEE-CCEEEE
Confidence 0 0112346777776544 333334 8999998765533211 01 223345666665433 222233 799999
Q ss_pred EeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCe
Q 016982 171 FSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPL 250 (379)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i 250 (379)
|-... .++.-... .....|..++...+.. ++. .+|.|+.|-.....++-.... ....|
T Consensus 164 wG~n~-----------------~gqlg~p~-~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~-~~~~v 221 (282)
T 3qhy_B 164 WGDNY-----------------FGQTTVPA-EAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTE-ALSGV 221 (282)
T ss_dssp EECCT-----------------TSTTSCCG-GGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGG-GGSSC
T ss_pred ecCCC-----------------CCCCCCce-ecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcc-cCCCc
Confidence 86421 01100000 0023466666554333 333 489999997555433311111 12346
Q ss_pred eeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 251 RDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 251 ~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
..++-... ..++.. ++.++.|-.+.
T Consensus 222 ~~i~~G~~-h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 222 SAIASGEW-YSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp CEEEECSS-CEEEEE-TTEEEEESTTC
T ss_pred eEEEcCCC-EEEEEE-CCEEEEecCCC
Confidence 66664433 344444 88888876554
No 350
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.89 E-value=8.9 Score=33.06 Aligned_cols=216 Identities=11% Similarity=0.060 Sum_probs=128.0
Q ss_pred CCeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCC
Q 016982 31 NNEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKE 110 (379)
Q Consensus 31 dg~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (379)
+..|.|.|+.++.....+.+.+ .+.-.+|..+.|+.-. ..++.++|+++.+....+.. ..+|.-=.|-.+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~---~e~VvfWkWis~- 116 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISL- 116 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC---SSCCCEEEEEET-
T ss_pred CCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec---CCCceEEEecCC-
Confidence 3478888888753222222222 2345688887776655 67899999999986665543 456666666533
Q ss_pred CEEEEEeCCCeEEEEEeecCCceeEEEEEeecC----CcCEEEEEEcCCCcEEEEeeC-------CCeEEEEeccccccc
Q 016982 111 NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH----DSSVTSVAWHPNNVFLATTST-------DGKCRVFSTFIKGVD 179 (379)
Q Consensus 111 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~l~~~~~-------d~~i~v~d~~~~~~~ 179 (379)
+.|+..+ +..|+.|++..... ..+.+ ..| ...|..-..+++.++++..+- .|.+.+|..
T Consensus 117 ~~l~lVT-~taVyHWsi~~~s~--P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~------ 186 (494)
T 1bpo_A 117 NTVALVT-DNAVYHWSMEGESQ--PVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV------ 186 (494)
T ss_dssp TEEEEEC-SSEEEEEESSSSCC--CEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEES------
T ss_pred CeEEEEc-CCeeEEecccCCCC--chhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeec------
Confidence 4555555 46899999875332 24444 333 356777778888888875442 467888875
Q ss_pred cccccCCCccCCcccceEEEeecCCcceEEEEECCC---CCEEEEEcC---CCeEEEEECCCCC---cee--eee--e--
Q 016982 180 IKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS---GNTLAYVGH---NSMIYFVDDVGPS---PLA--QNV--A-- 244 (379)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~---d~~i~v~d~~~~~---~~~--~~~--~-- 244 (379)
..+..+.+++|......+.+.-+ ..+++.+.. .+.++|.++.... +.. +.. .
T Consensus 187 -------------er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp 253 (494)
T 1bpo_A 187 -------------DRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (494)
T ss_dssp -------------TTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC
T ss_pred -------------cccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC
Confidence 34455667788666555544322 124444443 3789999985431 100 011 0
Q ss_pred --eecCCeeeEEEecCCcEE-EEEeCCCeEEEEecCCC
Q 016982 245 --FRDLPLRDVLFVSEKMVI-GVGFDCNPMVFAADETG 279 (379)
Q Consensus 245 --~~~~~i~~~~~s~~~~~l-~~~~d~~~~i~~~~~~~ 279 (379)
....-..++..++.-.++ +...-|.+++|+.....
T Consensus 254 pe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 254 PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp TTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred cccccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 012224466777654444 46777788888876654
No 351
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.33 E-value=8.2 Score=31.84 Aligned_cols=215 Identities=11% Similarity=0.065 Sum_probs=125.9
Q ss_pred CeEEEEEecCCceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCC
Q 016982 32 NEVHIYKLIQEKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKEN 111 (379)
Q Consensus 32 g~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (379)
..|.|.|+.++.....+.+.+ + +.-.+|..+.||.-. ..++.++|+++.+....+.+ ..+|.-=.|-.+ +
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~A-d----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~---~e~VvfWkWis~-~ 118 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISA-D----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISL-N 118 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCC-S----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC---SSCEEEEEECSS-S
T ss_pred CEEEEEECCCCCCcccccccc-c----eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec---CCccEEEEecCC-C
Confidence 368888887753222222222 2 334588888777665 67899999999986665543 567777777644 4
Q ss_pred EEEEEeCCCeEEEEEeecCCceeEEEEEeecC----CcCEEEEEEcCCCcEEEEeeC-------CCeEEEEecccccccc
Q 016982 112 KFAVGSGAKTVCICYYEQENNWWVSKLIRKRH----DSSVTSVAWHPNNVFLATTST-------DGKCRVFSTFIKGVDI 180 (379)
Q Consensus 112 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~l~~~~~-------d~~i~v~d~~~~~~~~ 180 (379)
.|+..+ +..|+.|++..... ..+.+ ..| ...|..-..+++.++++..+- .|.+.+|..
T Consensus 119 ~L~lVT-~taVyHWs~~~~s~--P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~------- 187 (365)
T 2xzh_A 119 TVALVT-DNAVYHWSMEGESQ--PVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV------- 187 (365)
T ss_dssp EEEEEE-SSEEEEEESSTTCC--CEEEE-ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET-------
T ss_pred eEEEEc-CCcEEEEcccCCCC--Cceee-ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEee-------
Confidence 555555 46899999876332 23444 333 346777777888888776542 467888875
Q ss_pred ccccCCCccCCcccceEEEeecCCcceEEEEECCC---CCEEEEEcC---CCeEEEEECCCC---Ccee--eee--e-e-
Q 016982 181 KEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS---GNTLAYVGH---NSMIYFVDDVGP---SPLA--QNV--A-F- 245 (379)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~---d~~i~v~d~~~~---~~~~--~~~--~-~- 245 (379)
..+..+.+++|......+.+.-+ ..+++.+.. .+.+++.++... .+.. +.. . .
T Consensus 188 ------------er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp 255 (365)
T 2xzh_A 188 ------------DRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 255 (365)
T ss_dssp ------------TTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT
T ss_pred ------------cccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc
Confidence 34555667787665544433221 123444332 368999998543 1110 000 0 0
Q ss_pred --ecCCeeeEEEecCCcEE-EEEeCCCeEEEEecCCC
Q 016982 246 --RDLPLRDVLFVSEKMVI-GVGFDCNPMVFAADETG 279 (379)
Q Consensus 246 --~~~~i~~~~~s~~~~~l-~~~~d~~~~i~~~~~~~ 279 (379)
...-.-++..|+.-.++ +...-|.+++|+.....
T Consensus 256 ea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 256 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp TCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred cccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 12223456666644433 46777788888876554
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.20 E-value=11 Score=31.84 Aligned_cols=215 Identities=10% Similarity=0.005 Sum_probs=118.9
Q ss_pred CcceeEEEe-CCCCcEEEEEec--C---CeEEEEEecCCc-----eEEE-EEecc-----CCCceEEEEEcCCCCEEEE-
Q 016982 10 AQCITCHAW-SPDHAMVAFCPN--N---NEVHIYKLIQEK-----WEKL-HVLQK-----HDQIVSGIDWSVRSNRIVT- 71 (379)
Q Consensus 10 ~~~i~~~~~-s~~~~~l~~~~~--d---g~i~i~~~~~~~-----~~~~-~~~~~-----~~~~v~~~~~~~~~~~l~~- 71 (379)
..-.+.++. +.+++.+++--+ + -++-..+..... ...+ ..++. +-..|..+...+.+++-+.
T Consensus 25 n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLD 104 (381)
T 3q6k_A 25 NMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVD 104 (381)
T ss_dssp GCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEE
T ss_pred ccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEe
Confidence 345567888 688888887643 2 244444443110 0122 44433 1235778888877654332
Q ss_pred -Ee-------------CCCeEEEEeccCC--ceeeeEEeecC----CCceeEEEEC---CC----CCEEEEEe-CCCeEE
Q 016982 72 -VS-------------HDRNSYVWNQEGS--EWVPTLVILRL----NRAALCVQWS---PK----ENKFAVGS-GAKTVC 123 (379)
Q Consensus 72 -~~-------------~d~~i~vw~~~~~--~~~~~~~~~~~----~~~v~~~~~~---~~----~~~l~~~~-~d~~v~ 123 (379)
|- .--+|.+||+.++ +.+..+.+... ......+.+. |. +.++..+. ....|.
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLI 184 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALF 184 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEE
T ss_pred CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEE
Confidence 10 0125889999999 88887765322 3456777776 22 23333333 367899
Q ss_pred EEEeecCCceeEEEEEe----------ec----CCcCEEEEEEcCC----CcEEEEeeCCCeEEEEeccccccccccccC
Q 016982 124 ICYYEQENNWWVSKLIR----------KR----HDSSVTSVAWHPN----NVFLATTSTDGKCRVFSTFIKGVDIKEKKE 185 (379)
Q Consensus 124 i~~~~~~~~~~~~~~~~----------~~----~~~~v~~~~~~p~----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 185 (379)
++|+.+++.|.+..... .+ ....+..++.+|+ ++.|......+. ++|.+.+. .++...
T Consensus 185 Vydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~--~L~~~~- 260 (381)
T 3q6k_A 185 IYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTK--ELKQKG- 260 (381)
T ss_dssp EEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHH--HHSSTT-
T ss_pred EEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHH--HhhCcc-
Confidence 99998887543321100 00 1246788899987 667766655442 34443211 111111
Q ss_pred CCccCCcccceEEEee--cCCcceEEEEEC-CCCCEEEEEcCCCeEEEEECCC
Q 016982 186 GTSSDTKFGEQILQLD--LSFSWAFGVKWS-PSGNTLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 186 ~~~~~~~~~~~~~~~~--~~~~~v~~~~~s-p~~~~l~~~~~d~~i~v~d~~~ 235 (379)
....++.+- +....-..++++ .+|.++++--....|..|+..+
T Consensus 261 -------~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 261 -------GKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -------CCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred -------hhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 112222221 111234456776 5787777777889999999775
No 353
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.95 E-value=18 Score=33.94 Aligned_cols=232 Identities=10% Similarity=0.019 Sum_probs=128.0
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecCCceEEEEEeccC----CCceEEEEEcCCCCEEEEEeCCCeEEEEeccCC
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKH----DQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEGS 86 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~ 86 (379)
..|.++...++|.+.+ |+. +-+..|+..+++..... +... ...|.++...+++..|-.++. +-+..++..++
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIP-LPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEEC-CCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEec-CCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 4578888887777655 444 45778887765332211 1111 224788888777765555554 45888898777
Q ss_pred ceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeEEEEEee-------cCCcCEEEEEEcCCCcEE
Q 016982 87 EWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRK-------RHDSSVTSVAWHPNNVFL 159 (379)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~l 159 (379)
+....... ....|.++....+|.+.+ |+. +-+.+++..+.. ...+.. -....|.++....+|.+-
T Consensus 222 ~~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW 293 (758)
T 3ott_A 222 QIKQTEAF--HNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTP----LQHIIHDSRNIQSLTNNIIWNIFADQEHNIW 293 (758)
T ss_dssp EEEEEEEE--EEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSC----CEEECCCTTCTTSCSCSCEEEEEECTTCCEE
T ss_pred eEEeccCC--CCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCc----EEEEEcCCCCcCcCCcCeEEEEEEcCCCCEE
Confidence 54332211 234688888887776544 454 457777665543 122211 122458888887777644
Q ss_pred EEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEe-----ecCCcceEEEEECCCCCEEEEEcCCCeEEEEECC
Q 016982 160 ATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQL-----DLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 160 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~ 234 (379)
+ |+..| +.++... ...+. ... ......|.++.-..+|.+.+. ..+| +..++..
T Consensus 294 i-GT~~G-l~~~~~~-----------------~~~~~-~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~ 351 (758)
T 3ott_A 294 L-GTDYG-ISLSRYN-----------------SALQF-IPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDP 351 (758)
T ss_dssp E-EESSS-EEEECCC-----------------C-CEE-EEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCT
T ss_pred E-EeCCc-ccccccC-----------------CceeE-EecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceeeccc
Confidence 4 44556 5444310 00000 000 011245888888888886654 4444 6666654
Q ss_pred CCCc-eeeeee-------eecCCeeeEEEecCCcEEEEEeCCCeEEEEecC
Q 016982 235 GPSP-LAQNVA-------FRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADE 277 (379)
Q Consensus 235 ~~~~-~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~ 277 (379)
++.. ....+. .....|.++.-.++|++.++. ++.+..++...
T Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~ 401 (758)
T 3ott_A 352 AGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYAT 401 (758)
T ss_dssp TSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTT
T ss_pred ccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCC
Confidence 4211 111111 012347788877888887766 56777776544
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.23 E-value=14 Score=32.16 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=60.1
Q ss_pred ceEEEEEcCCCC-EEEEEeCCCeEEEEeccCCce-eeeEEee---------cCCCceeEEEECCC----CCEEEEEeC--
Q 016982 56 IVSGIDWSVRSN-RIVTVSHDRNSYVWNQEGSEW-VPTLVIL---------RLNRAALCVQWSPK----ENKFAVGSG-- 118 (379)
Q Consensus 56 ~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~-~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~-- 118 (379)
.-..|+|.|+|. .|+++...|.|++++...... .....+. ........|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 347899999995 455567889999997543211 1111111 11356788999996 444333322
Q ss_pred C----------CeEEEEEeecC--------CceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCC
Q 016982 119 A----------KTVCICYYEQE--------NNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDG 166 (379)
Q Consensus 119 d----------~~v~i~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~ 166 (379)
+ ..|.-|.+... ....+...........-..|.|.|||+++++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 12333444321 111122211112223457899999998877766543
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.91 E-value=26 Score=33.89 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=32.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEe
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVI 94 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 94 (379)
.+.+++..++..++++-+.|+++++|++.+++++....+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 466777778888999999999999999999987776644
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=85.48 E-value=25 Score=33.21 Aligned_cols=155 Identities=12% Similarity=0.104 Sum_probs=77.0
Q ss_pred CcceeEEEeCCC-CcEEEEEecCCeEEEEEecCCceEEEEEecc----CCCceEEEEEcCCC-CEEEEEeCCCe----EE
Q 016982 10 AQCITCHAWSPD-HAMVAFCPNNNEVHIYKLIQEKWEKLHVLQK----HDQIVSGIDWSVRS-NRIVTVSHDRN----SY 79 (379)
Q Consensus 10 ~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~-~~l~~~~~d~~----i~ 79 (379)
...|.+|+++|. ...+.+++..+.|...+-....|+.+..... ....|.++++.|.. +.++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 468999999995 3556666666766655544444555322111 12369999999853 44444432211 23
Q ss_pred EEec-cCCc-eeeeEEeec------CCCceeEEEECCC-CCEEEEEeCCCeEEEEEeecCCceeEEEEEee--cCCcCEE
Q 016982 80 VWNQ-EGSE-WVPTLVILR------LNRAALCVQWSPK-ENKFAVGSGAKTVCICYYEQENNWWVSKLIRK--RHDSSVT 148 (379)
Q Consensus 80 vw~~-~~~~-~~~~~~~~~------~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~--~~~~~v~ 148 (379)
||.- +.++ +........ ....+..++++|. .+.+..+...+.|. ...+.++.|........ .....+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCeE
Confidence 3433 3332 222211000 0113567888874 45566665444432 22333454543221100 1124578
Q ss_pred EEEEcCCC-cEEEEeeCC
Q 016982 149 SVAWHPNN-VFLATTSTD 165 (379)
Q Consensus 149 ~~~~~p~~-~~l~~~~~d 165 (379)
.+.++|.. ..+..+..+
T Consensus 173 ~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEECTTSTTCEEEEESS
T ss_pred EEEECCCCCCEEEEEEcC
Confidence 89998853 455555543
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.39 E-value=26 Score=28.05 Aligned_cols=185 Identities=11% Similarity=-0.044 Sum_probs=92.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCceeE
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWV 135 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~~~~ 135 (379)
.|..++.... ..+... ||.|..|-......... .......|..++...... ++. . ||.|+.|-.+.......
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~--p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTM--PAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSC--CGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCC--CccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCC
Confidence 5666666533 323335 89999997654321111 011234677777664433 333 4 89998887654432111
Q ss_pred EEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCC
Q 016982 136 SKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPS 215 (379)
Q Consensus 136 ~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 215 (379)
+ ..-...|..++.... +.+.-. +|.|..|-... .++.-.. ......|..++...+
T Consensus 97 --P--~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~-----------------~gqlg~~-~~~~~~i~~i~~G~~ 151 (282)
T 3qhy_B 97 --P--AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDS-----------------DGQTTVP-AEAQSGVTALDGGVY 151 (282)
T ss_dssp --C--GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCT-----------------TSTTSCC-GGGGSSEEEEEECSS
T ss_pred --C--cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCC-----------------CCcCCCC-ccCCCCeEEEEcccC
Confidence 1 122346777776533 333345 89999996421 0110000 001233556655433
Q ss_pred CCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEecCCC
Q 016982 216 GNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAADETG 279 (379)
Q Consensus 216 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~~~~ 279 (379)
.. ++. . ||.|+.|-.....++-... .....|..++...+ ..++. .++.++.|-.+..+
T Consensus 152 ~~-~~l-~-~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G~~-hs~al-~~G~v~~wG~n~~g 209 (282)
T 3qhy_B 152 TA-LAV-K-NGGVIAWGDNYFGQTTVPA-EAQSGVDDVAGGIF-HSLAL-KDGKVIAWGDNRYK 209 (282)
T ss_dssp EE-EEE-E-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSS-EEEEE-ETTEEEEEECCTTS
T ss_pred EE-EEE-E-CCEEEEecCCCCCCCCCce-ecCCCeEEEEecCC-EEEEE-ECCeEEEEECCCCC
Confidence 32 222 3 6889998755443321111 11345666665443 33344 68888888766543
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.02 E-value=16 Score=36.18 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=31.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeccCCceeeeEEe
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVI 94 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 94 (379)
.+.+++..++..++++-+.|+++++|++.+++++....+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 344556667778999999999999999999988777654
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.90 E-value=15 Score=33.16 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=41.1
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEE
Q 016982 57 VSGIDWSVRSNRIVTVSHD------------RNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVG 116 (379)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d------------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 116 (379)
.-.|.|+|.|++++.-..+ ..+.+.+..+++..+.+. ......++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 3568999999876654432 235566667777555443 3456889999999999877664
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.70 E-value=7.4 Score=38.56 Aligned_cols=26 Identities=19% Similarity=0.193 Sum_probs=23.4
Q ss_pred ceEEEeecCceEEEEeCCCccccccC
Q 016982 352 TRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 352 ~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
.+++|-+.|+++|+|++.+++++...
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEeCCCEEEEEECCCCCeEEee
Confidence 79999999999999999999887653
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=73.58 E-value=8 Score=35.63 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=23.2
Q ss_pred ceEEEeecCceEEEEeCCCccccccC
Q 016982 352 TRFTTSGLDGKIVTWDLESQEDLLNY 377 (379)
Q Consensus 352 ~~l~t~~~Dg~v~iW~~~~~~~~~~~ 377 (379)
.+++|-+.|+++|+|+++++++++..
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEee
Confidence 69999999999999999999877643
No 362
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=71.96 E-value=40 Score=27.67 Aligned_cols=204 Identities=7% Similarity=-0.005 Sum_probs=106.0
Q ss_pred CCCcEEEEEecCCeEEEEEecCCc--eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc---C------Cce
Q 016982 20 PDHAMVAFCPNNNEVHIYKLIQEK--WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE---G------SEW 88 (379)
Q Consensus 20 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~---~------~~~ 88 (379)
|+..++++.+.+|.|+--.+..-+ ......+... +.+..+........|+..+..|.+.-.... . |..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 566788889999999987654200 0011123333 334444444445567777778876655442 1 111
Q ss_pred eee-EEeecCCCceeEE-EECC--CCCEEEEEeCCCeEEEEEeecCCce---eEEEEEeecCCcCEEEEEEcCCCcEEEE
Q 016982 89 VPT-LVILRLNRAALCV-QWSP--KENKFAVGSGAKTVCICYYEQENNW---WVSKLIRKRHDSSVTSVAWHPNNVFLAT 161 (379)
Q Consensus 89 ~~~-~~~~~~~~~v~~~-~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 161 (379)
+.. +. ......|..+ ...+ ++.+++..+.+|.++-..+..-... .-...+.....+.+..+........++.
T Consensus 82 i~~~i~-L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIP-IDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSC-CCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred hhhccC-CCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence 111 11 1123345544 3432 2567889999999998766422110 0011111122355655555555567888
Q ss_pred eeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCC-EEEEEcCCCeEEEEECCC
Q 016982 162 TSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGN-TLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 162 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~v~d~~~ 235 (379)
.+.+|.+..+... +.+.... ...+.....+.. ...|.++..-+++. .|++.+..|..+..++..
T Consensus 161 ~T~~G~~irf~~~----ev~~~gR-----~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 161 VTHNGYALWFDES----EVSIVGV-----RAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EETTSEEEEEEGG----GSCBCCS-----SCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EeCCCcEEEEEHH----HCcccCC-----CCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 8889998888763 2222110 011222222222 23455554434444 677778888888777543
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=71.01 E-value=38 Score=27.02 Aligned_cols=161 Identities=11% Similarity=0.036 Sum_probs=90.1
Q ss_pred CcceeEEEeCCCCcEEEEEecCCeEEEEE---ecCCceEEEEEeccCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeccC
Q 016982 10 AQCITCHAWSPDHAMVAFCPNNNEVHIYK---LIQEKWEKLHVLQKHDQIVSGIDWSV-RSNRIVTVSHDRNSYVWNQEG 85 (379)
Q Consensus 10 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~---~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~~ 85 (379)
.+.+..+.-......|+.-+.+|.++--. +.......+ +. ....|..+.... +..+++..+.+|.++...+..
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHH
Confidence 34555555544455566666778776543 333211212 33 244566654321 467899999999999988754
Q ss_pred Cc----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCc----eeEEEEEeecCCcCEEEEEEcCCCc
Q 016982 86 SE----WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN----WWVSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 86 ~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
-. -...+.+. ....+..+........++..+..|.+..+....-.. ..-.+.+.......|..+...+++.
T Consensus 100 ~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 100 FEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS
T ss_pred hhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC
Confidence 31 01111111 234555555555566788888889887766533210 0001111112335566665555667
Q ss_pred EEEEeeCCCeEEEEecc
Q 016982 158 FLATTSTDGKCRVFSTF 174 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~ 174 (379)
.++..+..|.++...+.
T Consensus 179 ~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 179 YLLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEEEETTSCEEEEEGG
T ss_pred EEEEEeCCCcEEEeEHH
Confidence 88888999999888763
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=69.95 E-value=19 Score=32.53 Aligned_cols=58 Identities=10% Similarity=0.173 Sum_probs=37.9
Q ss_pred eEEEEECCCCCEEEEEcCC------------CeEEEEECCCCCceeeeeeee-cCCeeeEEEecCCcEEEEE
Q 016982 207 AFGVKWSPSGNTLAYVGHN------------SMIYFVDDVGPSPLAQNVAFR-DLPLRDVLFVSEKMVIGVG 265 (379)
Q Consensus 207 v~~~~~sp~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~ 265 (379)
.-.|+|+|.|++++.-..+ ..+.+.+..+++ +.+.+..+ ...++.++|+||++.|..+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4679999999977654322 245555655544 33444433 5679999999998876643
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.69 E-value=75 Score=29.48 Aligned_cols=84 Identities=10% Similarity=0.154 Sum_probs=50.3
Q ss_pred eccCcceeEEEeCCCCcEEEEEecCCeEEEEEecCC-ceEEEE------------Eecc-----CCCceEEEEEcCCCCE
Q 016982 7 HQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQE-KWEKLH------------VLQK-----HDQIVSGIDWSVRSNR 68 (379)
Q Consensus 7 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~------------~~~~-----~~~~v~~~~~~~~~~~ 68 (379)
+....|-..++.+++. ++++-.||.+.-.+.... .+++.. -+.+ ....|.++.+ +..+
T Consensus 158 F~~R~Ph~L~avs~~~--liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~--~~~f 233 (729)
T 3f7f_A 158 FTVRVPHFLFYVSPQF--SVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLF--HERY 233 (729)
T ss_dssp TTTSCEEEEEECSSSB--EEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEE--TTTE
T ss_pred ccccCCcEEEEECCCe--EEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEecc--CCcE
Confidence 3445666777777644 555556665554444322 111100 0111 1123555544 3679
Q ss_pred EEEEeCCCeEEEEeccCCceeeeEEe
Q 016982 69 IVTVSHDRNSYVWNQEGSEWVPTLVI 94 (379)
Q Consensus 69 l~~~~~d~~i~vw~~~~~~~~~~~~~ 94 (379)
+++-+.|+++|+|++.+++++.....
T Consensus 234 LftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 234 LIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEEEcCCeEEEEEcCCCceEEeecc
Confidence 99999999999999999987777665
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.09 E-value=45 Score=29.92 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=41.0
Q ss_pred ceEEEEEcCCCCEEEEEeC------------CCeEEEEeccCCceeeeEEeecCCCceeEEEECCCCCEEEEEe
Q 016982 56 IVSGIDWSVRSNRIVTVSH------------DRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGS 117 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~------------d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (379)
....|.|.++|.+.+.... ...+..++..+++....+. ......++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEEE
Confidence 3567999999987764332 1256666776777544432 22346789999999998887764
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=64.76 E-value=36 Score=30.52 Aligned_cols=59 Identities=12% Similarity=0.161 Sum_probs=38.8
Q ss_pred ceEEEEECCCCCEEEEEcC------------CCeEEEEECCCCCceeeeeeee-cCCeeeEEEecCCcEEEEE
Q 016982 206 WAFGVKWSPSGNTLAYVGH------------NSMIYFVDDVGPSPLAQNVAFR-DLPLRDVLFVSEKMVIGVG 265 (379)
Q Consensus 206 ~v~~~~~sp~~~~l~~~~~------------d~~i~v~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~ 265 (379)
....|.|+++|.+.+.... ...+..++..+++ +...+... ...++.++|+||++.|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-l~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe-EEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4678999999987774332 1256666665554 33333322 3568999999999877643
No 368
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=64.59 E-value=96 Score=29.26 Aligned_cols=114 Identities=11% Similarity=0.173 Sum_probs=57.7
Q ss_pred CCceEEEEEcCCC-CEEEEEeCCCeEEEEeccCCceeeeEEeec----CCCceeEEEECCC-CCEEEEEeCCCe----EE
Q 016982 54 DQIVSGIDWSVRS-NRIVTVSHDRNSYVWNQEGSEWVPTLVILR----LNRAALCVQWSPK-ENKFAVGSGAKT----VC 123 (379)
Q Consensus 54 ~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~~d~~----v~ 123 (379)
...|.+|+++|.. ..++.+...+.|...+=....+.+...... ....+.++++.|. .+.++++..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 4589999999964 556666666766555533334443221000 1246899999984 344444432211 22
Q ss_pred EE-EeecCCceeEEEEEee--c---CCcCEEEEEEcCCC-cEEEEeeCCCe
Q 016982 124 IC-YYEQENNWWVSKLIRK--R---HDSSVTSVAWHPNN-VFLATTSTDGK 167 (379)
Q Consensus 124 i~-~~~~~~~~~~~~~~~~--~---~~~~v~~~~~~p~~-~~l~~~~~d~~ 167 (379)
|| ..+.++.|.....-.. . ....+..++++|.. +.+..+...+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g 144 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG 144 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC
Confidence 33 2334444433321000 0 01135567888753 45555553433
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=63.75 E-value=59 Score=26.49 Aligned_cols=204 Identities=11% Similarity=0.002 Sum_probs=109.2
Q ss_pred CCCcEEEEEecCCeEEEEEecCCc-------eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEeccC---C---
Q 016982 20 PDHAMVAFCPNNNEVHIYKLIQEK-------WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQEG---S--- 86 (379)
Q Consensus 20 ~~~~~l~~~~~dg~i~i~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~---~--- 86 (379)
++..++++.+.+|.|+-..+..=+ ......+... +.+..+........++..+..|.++-..... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466788889999999988765310 0111122332 3344444444556777778888877665432 1
Q ss_pred ---cee-eeEEeecCCCceeEEEECC---CCCEEEEEeCCCeEEEEEeecCCcee--EEEEEeecCCcCEEEEEEcCCCc
Q 016982 87 ---EWV-PTLVILRLNRAALCVQWSP---KENKFAVGSGAKTVCICYYEQENNWW--VSKLIRKRHDSSVTSVAWHPNNV 157 (379)
Q Consensus 87 ---~~~-~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~ 157 (379)
..+ ..+.+. ....|..+...+ +...++..+..|.++-..+..-.... -...+.....+.+..+.....+.
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 000 011111 223344443322 45678888999999887664322100 01111112245666666655556
Q ss_pred EEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECCC
Q 016982 158 FLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVG 235 (379)
Q Consensus 158 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~~ 235 (379)
.++..+.+|.+..+... +++.... ...+.....+.. ...|..+..-+++..+++.+..|..+..++..
T Consensus 164 ~i~l~T~~G~~~r~~~~----ev~~~gR-----~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSR----DVRLTNR-----GTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGG----GSCBCCT-----TBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHH----HccccCC-----CCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 78888999999988863 2221110 112333333332 34455665555566677888899988887643
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=58.01 E-value=70 Score=25.48 Aligned_cols=165 Identities=13% Similarity=0.038 Sum_probs=90.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEE---EeccCCceeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCeEEEEEeecCC
Q 016982 56 IVSGIDWSVRSNRIVTVSHDRNSYV---WNQEGSEWVPTLVILRLNRAALCVQWSP-KENKFAVGSGAKTVCICYYEQEN 131 (379)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~v---w~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~~~~~~~ 131 (379)
.+..+.-.....+|+.-+..|.++- |++....... + ......|..+.... +...++..+.+|.++-..+..-.
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l--l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L--KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C--SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c--CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 4444444444455666677777654 3333332211 2 23345566654421 46789999999999887664421
Q ss_pred --ceeEEEEEeecCCcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEE
Q 016982 132 --NWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFG 209 (379)
Q Consensus 132 --~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 209 (379)
... ...+.....+.+..+........++..+..|.+..+... +++.... ...+.....+.. ...|..
T Consensus 102 ~~~~G-~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~----eip~~gR-----~a~Gv~~i~L~~-~d~vv~ 170 (276)
T 3no0_A 102 YKAQG-MPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVR----EVPPSTP-----GARGVQGIKLEK-NDETSG 170 (276)
T ss_dssp TCSTT-EECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGG----GSCBCCT-----TCCCEECCCCCT-TCCEEE
T ss_pred hhcCC-eEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh----hCCCcCC-----CCCCEEEEccCC-CCEEEE
Confidence 000 111101223456666555556678888899998888763 2222110 012222222332 244555
Q ss_pred EEECCCCCEEEEEcCCCeEEEEECC
Q 016982 210 VKWSPSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 210 ~~~sp~~~~l~~~~~d~~i~v~d~~ 234 (379)
+...+++..++..+..|.++...+.
T Consensus 171 ~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 171 LRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 5544556678888889998888754
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=57.83 E-value=85 Score=26.46 Aligned_cols=161 Identities=6% Similarity=0.057 Sum_probs=91.2
Q ss_pred ceeEEEeCCCCcEEEE--Eec-------------CCeEEEEEecCC--ceEEEEEeccC----CCceEEEEEc---CC--
Q 016982 12 CITCHAWSPDHAMVAF--CPN-------------NNEVHIYKLIQE--KWEKLHVLQKH----DQIVSGIDWS---VR-- 65 (379)
Q Consensus 12 ~i~~~~~s~~~~~l~~--~~~-------------dg~i~i~~~~~~--~~~~~~~~~~~----~~~v~~~~~~---~~-- 65 (379)
.|..+...+.+++-+. |.- --+|.+||+.++ +......+... ...+..+++. |+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 5777777777665432 210 126889999998 54444444321 3457788887 32
Q ss_pred --CCEEEEEe-CCCeEEEEeccCCceeeeEE------------eec----CCCceeEEEECCC----CCEEEEEeCCCeE
Q 016982 66 --SNRIVTVS-HDRNSYVWNQEGSEWVPTLV------------ILR----LNRAALCVQWSPK----ENKFAVGSGAKTV 122 (379)
Q Consensus 66 --~~~l~~~~-~d~~i~vw~~~~~~~~~~~~------------~~~----~~~~v~~~~~~~~----~~~l~~~~~d~~v 122 (379)
+.++..+. ....|.++|+.+++.-+... ..+ ....+..++++|+ ++.|....-.+ -
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~ 246 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-I 246 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-S
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-C
Confidence 23444443 45679999999886433221 000 0246788999997 67776665443 2
Q ss_pred EEEEeecC-----CceeEEEEEe-ecCCcCEEEEEEc-CCCcEEEEeeCCCeEEEEec
Q 016982 123 CICYYEQE-----NNWWVSKLIR-KRHDSSVTSVAWH-PNNVFLATTSTDGKCRVFST 173 (379)
Q Consensus 123 ~i~~~~~~-----~~~~~~~~~~-~~~~~~v~~~~~~-p~~~~l~~~~~d~~i~v~d~ 173 (379)
++|.+.+. ......+.+- .+....-..++.. .+|.++++--....|..|+.
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEET
T ss_pred cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeC
Confidence 33444321 1000122221 1112334456675 57777777778889999986
No 372
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=57.43 E-value=1.2e+02 Score=28.20 Aligned_cols=105 Identities=13% Similarity=0.138 Sum_probs=56.1
Q ss_pred ceeEEEeCCCC-cEEEEEecCCeEEEEEecCCceEEEEEeccC----CCceEEEEEcCCC-CEEEEEeCC-------CeE
Q 016982 12 CITCHAWSPDH-AMVAFCPNNNEVHIYKLIQEKWEKLHVLQKH----DQIVSGIDWSVRS-NRIVTVSHD-------RNS 78 (379)
Q Consensus 12 ~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~-~~l~~~~~d-------~~i 78 (379)
.|.+|+++|.. ..+.++...+.|+..+-....++.+...... ...|.+|+++|.. +.++.+... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 79999999964 4555566566666665444555553221111 2358999999843 444444321 123
Q ss_pred EEEeccC-Cc-eeeeEEeecCC--------CceeEEEECCC-CCEEEEEeC
Q 016982 79 YVWNQEG-SE-WVPTLVILRLN--------RAALCVQWSPK-ENKFAVGSG 118 (379)
Q Consensus 79 ~vw~~~~-~~-~~~~~~~~~~~--------~~v~~~~~~~~-~~~l~~~~~ 118 (379)
.||.-.. ++ +.... .... ..+..++++|. .+.++.+..
T Consensus 104 ~l~~S~DgG~TW~~~~--~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 104 AILRSTDRGETWEKTI--LPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp EEEEESSSSSSCEEEE--CSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cEEEeCCCCCCcccCC--CCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 4554433 32 22221 1111 12467899984 456666653
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=55.68 E-value=85 Score=25.77 Aligned_cols=162 Identities=8% Similarity=0.023 Sum_probs=88.0
Q ss_pred cceeEEEeCCCCcEEEEEecCCeEEEEEecC---C----ceEEEEE---eccCCCceEEE-EEcC--CCCEEEEEeCCCe
Q 016982 11 QCITCHAWSPDHAMVAFCPNNNEVHIYKLIQ---E----KWEKLHV---LQKHDQIVSGI-DWSV--RSNRIVTVSHDRN 77 (379)
Q Consensus 11 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~---~----~~~~~~~---~~~~~~~v~~~-~~~~--~~~~l~~~~~d~~ 77 (379)
+.+..+........|+.-+..|.++...... . ...++.. +.. ...|.++ ...+ +..++++++.+|.
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 3444444444445555555677766655421 1 1122211 222 2345444 3432 4678999999999
Q ss_pred EEEEeccCCce-----eeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEee--cCCc----eeEEEEEeecCCcC
Q 016982 78 SYVWNQEGSEW-----VPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYE--QENN----WWVSKLIRKRHDSS 146 (379)
Q Consensus 78 i~vw~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~--~~~~----~~~~~~~~~~~~~~ 146 (379)
++.-.+..-.. ...+.+.. ...+..+........++..+..|.+..+... .-.. ..-.+.+.......
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~ 199 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDR 199 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCC
T ss_pred EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCE
Confidence 99887654211 11122222 3344444444455677778888888777665 2110 00011111223456
Q ss_pred EEEEEEcCCCcEEEEeeCCCeEEEEecc
Q 016982 147 VTSVAWHPNNVFLATTSTDGKCRVFSTF 174 (379)
Q Consensus 147 v~~~~~~p~~~~l~~~~~d~~i~v~d~~ 174 (379)
|.++...+.+..++..+..|.++.-.+.
T Consensus 200 Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 200 LLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 7777666666788899999999888763
No 374
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.10 E-value=1.6e+02 Score=28.63 Aligned_cols=29 Identities=21% Similarity=0.187 Sum_probs=25.2
Q ss_pred CEEEEEEcCCCcEEEEeeCCCeEEEEecc
Q 016982 146 SVTSVAWHPNNVFLATTSTDGKCRVFSTF 174 (379)
Q Consensus 146 ~v~~~~~~p~~~~l~~~~~d~~i~v~d~~ 174 (379)
.+.+++..++..++++-+.|+++|+|++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~ 265 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLS 265 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECC
Confidence 56777888888899999999999999973
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=54.31 E-value=86 Score=25.42 Aligned_cols=201 Identities=10% Similarity=0.026 Sum_probs=103.0
Q ss_pred CCCcEEEEEecCCeEEEEEecCCc-------eEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEec---cCC---
Q 016982 20 PDHAMVAFCPNNNEVHIYKLIQEK-------WEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQ---EGS--- 86 (379)
Q Consensus 20 ~~~~~l~~~~~dg~i~i~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~---~~~--- 86 (379)
|+..++++.+.+|.|+--.+..=+ ......+... +.+..+........|+..+..|.+.-+.. ...
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 456678888999999877664310 0111122333 33434444444556666777887655543 221
Q ss_pred ---ceee-eEEeecCCCceeEEEE-C--CCCCEEEEEeCCCeEEEEEeecCCcee--EEEEEe-ecCCcCEEEEEEcCCC
Q 016982 87 ---EWVP-TLVILRLNRAALCVQW-S--PKENKFAVGSGAKTVCICYYEQENNWW--VSKLIR-KRHDSSVTSVAWHPNN 156 (379)
Q Consensus 87 ---~~~~-~~~~~~~~~~v~~~~~-~--~~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~~-~~~~~~v~~~~~~p~~ 156 (379)
.... .+. ......|..+.. . .++.+++..+.+|.++-..+..-.... -...+. ... +.+..+......
T Consensus 80 a~G~~i~~~l~-l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLP-LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSC-CCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccC-CCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 1111 111 122344555533 2 345678889999999887664221100 011110 222 556555555455
Q ss_pred cEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEEC
Q 016982 157 VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDD 233 (379)
Q Consensus 157 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~ 233 (379)
..++..+.+|.+..+... +.+.... ...+.....+.. ...|.++...+++..+++.+..|.++-.++
T Consensus 158 ~~i~l~T~~G~~irf~~~----~v~~~gr-----~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKES----SVRAMGC-----NTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp CEEEEEETTSEEEEEEGG----GSCBCCT-----TCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred CEEEEECCCCcEEEEEHH----HcCccCC-----CCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 667778889988888763 2222211 011222222222 344666655555667788888898888765
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=43.81 E-value=1.3e+02 Score=26.92 Aligned_cols=69 Identities=9% Similarity=0.047 Sum_probs=43.2
Q ss_pred ceEEEEEcCCC--CEEEEEeCCCeEEEEeccCCc----eeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCeEEE
Q 016982 56 IVSGIDWSVRS--NRIVTVSHDRNSYVWNQEGSE----WVPTLVILRLNRAAL-CVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 56 ~v~~~~~~~~~--~~l~~~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i 124 (379)
.+++++....+ ..++.|+.+|.|.-..+.... ....+.+.....+|. .+.++++...|.+++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35566655433 346778888887655554321 222333333356785 8999999999999887765554
No 377
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.35 E-value=1.5e+02 Score=24.81 Aligned_cols=155 Identities=7% Similarity=-0.015 Sum_probs=86.6
Q ss_pred eCCCCcEEEEEecCCeEEEEEecC-------CceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEecc---C--
Q 016982 18 WSPDHAMVAFCPNNNEVHIYKLIQ-------EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWNQE---G-- 85 (379)
Q Consensus 18 ~s~~~~~l~~~~~dg~i~i~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~---~-- 85 (379)
+-|+..++++.+.+|.|+--.+.. +.......+.. .+.+..+........|+..+..|.+.-+... .
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 346778999999999999876532 11123334443 3455555555555667777778876655432 1
Q ss_pred ----Cceee-eEEeecCCCceeEEE-ECC--CCCEEEEEeCCCeEEEEEeecCCcee--EEEEEeecCCcCEEEEEEcCC
Q 016982 86 ----SEWVP-TLVILRLNRAALCVQ-WSP--KENKFAVGSGAKTVCICYYEQENNWW--VSKLIRKRHDSSVTSVAWHPN 155 (379)
Q Consensus 86 ----~~~~~-~~~~~~~~~~v~~~~-~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~p~ 155 (379)
|.... .+.+ .....|.++. ... ++.+|+.++..|.++-..+..-.... -...+...-.+.+..+.....
T Consensus 82 r~a~G~~i~~ll~L-~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPL-ESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECS
T ss_pred cccCCcCHhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCC
Confidence 11111 1111 2234455443 322 45689999999999887654322100 011111112445555555555
Q ss_pred CcEEEEeeCCCeEEEEecc
Q 016982 156 NVFLATTSTDGKCRVFSTF 174 (379)
Q Consensus 156 ~~~l~~~~~d~~i~v~d~~ 174 (379)
...++..+.+|.+..+...
T Consensus 161 ~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CCEEEEEETTSEEEEEEGG
T ss_pred CceEEEEeCCCeEEEEEcc
Confidence 5677888889988888763
No 378
>1s28_A ORF1; type III chaperone; 3.00A {Pseudomonas syringae PV} SCOP: d.198.1.1
Probab=41.12 E-value=41 Score=22.83 Aligned_cols=37 Identities=8% Similarity=0.191 Sum_probs=29.2
Q ss_pred CcccceeccCcceeEEEeCCCCcEEEEEecCCeEEEEE
Q 016982 1 MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYK 38 (379)
Q Consensus 1 m~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~ 38 (379)
|....-++|.+.|+|..|. +=..=+.+...+.|++--
T Consensus 20 mP~~P~kkhe~eVYcf~F~-~i~i~iy~d~~rwvyf~A 56 (132)
T 1s28_A 20 MPGFPEKKHEHEVYCFEFK-EVSIRIYQDKFKWVYFLS 56 (132)
T ss_dssp CCBCCCCCSTTCCEEEEEG-GGTEEEEECTTSEEEEEE
T ss_pred CCCCCcccccCceEEEEEC-CEEEEEeecCCcEEEEEe
Confidence 4455567799999999999 777778888888887753
No 379
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=40.81 E-value=1.1e+02 Score=27.33 Aligned_cols=70 Identities=10% Similarity=0.052 Sum_probs=43.3
Q ss_pred cceeEEEeCCCC--cEEEEEecCCeEEEEEecCCc-e-EEEEEe--ccCCCceE-EEEEcCCCCEEEEEeCCCeEEE
Q 016982 11 QCITCHAWSPDH--AMVAFCPNNNEVHIYKLIQEK-W-EKLHVL--QKHDQIVS-GIDWSVRSNRIVTVSHDRNSYV 80 (379)
Q Consensus 11 ~~i~~~~~s~~~--~~l~~~~~dg~i~i~~~~~~~-~-~~~~~~--~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~v 80 (379)
..+++|+....+ ..+..|+.+|.|.=..+.... . .....+ .....+|. .|.+++++.+|+.++.++.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 356666665433 467788899987655554321 1 122222 22345785 8999999999998887654443
No 380
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=40.05 E-value=80 Score=20.91 Aligned_cols=58 Identities=9% Similarity=-0.056 Sum_probs=29.2
Q ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEEec
Q 016982 208 FGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFAAD 276 (379)
Q Consensus 208 ~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~~~ 276 (379)
..+.+..||++++.....+ -.+|...+.. ...-..+.+..+|.++....++. .+|..+
T Consensus 26 ~~L~~q~dGNLvL~~~~~~-~~vWssnt~~---------~~~~~~l~l~~dGNLVl~d~~~~-~iW~S~ 83 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKT-NIVWESGTSG---------RGQHCFMRLGHSGELDITDDRLN-TVFVSN 83 (113)
T ss_dssp EEEEECTTSCEEEEETTTT-EEEEECCCTT---------SCSSCEEEECTTSCEEEECTTSC-EEEECS
T ss_pred EEEEEcCCCEEEEEECCCC-EEEEECCccc---------CCcCEEEEEeCCCcEEEECCCCC-EEEECC
Confidence 3455556666555432112 2355533221 11123567778888887654444 366644
No 381
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=34.70 E-value=2.8e+02 Score=25.74 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=23.6
Q ss_pred eEEEE-EcCCCCEEEEE-eCCC----eEEEEeccCCceee
Q 016982 57 VSGID-WSVRSNRIVTV-SHDR----NSYVWNQEGSEWVP 90 (379)
Q Consensus 57 v~~~~-~~~~~~~l~~~-~~d~----~i~vw~~~~~~~~~ 90 (379)
...+. ++|++++++.+ |..| .++++|+.+++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 44555 89999876543 3333 59999999997553
No 382
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=33.51 E-value=1.9e+02 Score=23.36 Aligned_cols=151 Identities=11% Similarity=0.030 Sum_probs=80.2
Q ss_pred CCcEEEEEecCCeEEEEEecC---C----ceEEEE---EeccCCCceEEEEE-c--CCCCEEEEEeCCCeEEEEeccCCc
Q 016982 21 DHAMVAFCPNNNEVHIYKLIQ---E----KWEKLH---VLQKHDQIVSGIDW-S--VRSNRIVTVSHDRNSYVWNQEGSE 87 (379)
Q Consensus 21 ~~~~l~~~~~dg~i~i~~~~~---~----~~~~~~---~~~~~~~~v~~~~~-~--~~~~~l~~~~~d~~i~vw~~~~~~ 87 (379)
....|+..+..|.++-+.... . ...++. .+. ....|.++.. . .++.+++..+.+|.++.-.+..-.
T Consensus 52 ~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~ 130 (307)
T 1zi0_A 52 THDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFN 130 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGT
T ss_pred CCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhh
Confidence 344455556677766665532 1 112211 122 2234555433 2 345678889999999988764211
Q ss_pred -----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCc----eeEEEEEeecCCcCEEEEEEcCCCcE
Q 016982 88 -----WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN----WWVSKLIRKRHDSSVTSVAWHPNNVF 158 (379)
Q Consensus 88 -----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~p~~~~ 158 (379)
-...+.+... ..+..+....+...++..+.+|.+..+....-.. ..-.+.+.......|.++...+++..
T Consensus 131 ~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ 209 (307)
T 1zi0_A 131 RLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGA 209 (307)
T ss_dssp TCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCE
T ss_pred ccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCE
Confidence 1111222222 4444444444455677777888877766543211 00011111223456666665555567
Q ss_pred EEEeeCCCeEEEEec
Q 016982 159 LATTSTDGKCRVFST 173 (379)
Q Consensus 159 l~~~~~d~~i~v~d~ 173 (379)
+++.+..|..+-.++
T Consensus 210 ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 210 ILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEETTSEEEEECG
T ss_pred EEEEEcCCceEEEEH
Confidence 888899999888876
No 383
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=32.22 E-value=2e+02 Score=23.27 Aligned_cols=160 Identities=11% Similarity=0.023 Sum_probs=85.3
Q ss_pred eeEEEeCCCCcEEEEEecCCeEEEEEecCCc---e----EE---EEEeccCCCceEEEEEcC---CCCEEEEEeCCCeEE
Q 016982 13 ITCHAWSPDHAMVAFCPNNNEVHIYKLIQEK---W----EK---LHVLQKHDQIVSGIDWSV---RSNRIVTVSHDRNSY 79 (379)
Q Consensus 13 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~---~----~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~ 79 (379)
+..+........++..+..|.++-+....-. . .+ .-.+.. ...|.++...+ +..+|+..+.+|.++
T Consensus 49 l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 49 IVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp EEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 3333333334455556677877776654210 0 00 001221 22344443322 456788889999998
Q ss_pred EEeccCCc-----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEEEEeecCCc----eeEEEEEeecCCcCEEEE
Q 016982 80 VWNQEGSE-----WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENN----WWVSKLIRKRHDSSVTSV 150 (379)
Q Consensus 80 vw~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~~~~~~~~~~v~~~ 150 (379)
...+..-. -...+.+.. ...+..+....+...++..+.+|....+....-.. ..-.+.+.......|..+
T Consensus 128 r~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~ 206 (312)
T 1suu_A 128 RFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKV 206 (312)
T ss_dssp EEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEE
T ss_pred EEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEE
Confidence 88764321 112222222 34555555544456788888889888877654110 000112211234556666
Q ss_pred EEcCCCcEEEEeeCCCeEEEEecc
Q 016982 151 AWHPNNVFLATTSTDGKCRVFSTF 174 (379)
Q Consensus 151 ~~~p~~~~l~~~~~d~~i~v~d~~ 174 (379)
..-+++..+++.+..|..+...+.
T Consensus 207 ~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 207 LSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEECCCCeEEEEECCCceEEEEHH
Confidence 655556678888999999988874
No 384
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.66 E-value=1.4e+02 Score=26.23 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=36.1
Q ss_pred EEEEEeCCCeEEEEecc-CCc-------eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 68 RIVTVSHDRNSYVWNQE-GSE-------WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 68 ~l~~~~~d~~i~vw~~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
.+..|+.+|.|.-.-+. .+. .+..+.+.....+|..|.++++...|.+++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46677888876543332 211 1112222234578999999999999999998876665
No 385
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=30.88 E-value=1.2e+02 Score=20.04 Aligned_cols=54 Identities=7% Similarity=-0.121 Sum_probs=28.0
Q ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCceeeeeeeecCCeeeEEEecCCcEEEEEeCCCeEEEE
Q 016982 208 FGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLAQNVAFRDLPLRDVLFVSEKMVIGVGFDCNPMVFA 274 (379)
Q Consensus 208 ~~~~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~~~i~~ 274 (379)
..+.+..||++++... ++ +|...+... ..-..+.+..+|.++....++...+|.
T Consensus 22 ~~L~~q~dGnLvl~~~-~~---vW~snt~~~---------~~~~~l~l~~dGNLVl~~~~~~~~vW~ 75 (111)
T 3mez_A 22 AAFVMQGDCNLVLYNE-AG---GFQSNTHGR---------GVDCTLRLNNRGQLEIHSANSNTPVWV 75 (111)
T ss_dssp EEEEECTTSCEEEECS-SC---CEECCCTTS---------CSSCEEEECTTSCEEEECSSCSSCSEE
T ss_pred EEEEEccCCeEEEECC-CC---EEECCcccC---------CcCEEEEEcCCCcEEEEeCCCCEEEEE
Confidence 4566667777666432 22 676433211 111345667778777755444433453
No 386
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=30.57 E-value=17 Score=30.68 Aligned_cols=21 Identities=33% Similarity=0.632 Sum_probs=13.8
Q ss_pred EEeecCceEEEEeCCCccccc
Q 016982 355 TTSGLDGKIVTWDLESQEDLL 375 (379)
Q Consensus 355 ~t~~~Dg~v~iW~~~~~~~~~ 375 (379)
..++.+|.||+||+++.+.+-
T Consensus 161 ~~~~~~GVVrvWDVkd~slLn 181 (577)
T 3mwp_A 161 ARAGRDGVVRVWDVKNAELLN 181 (577)
T ss_dssp -----CCEECSEECSCGGGGT
T ss_pred CCCCCCCeEEEEecCCHHHHh
Confidence 377889999999999877654
No 387
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=30.31 E-value=2.3e+02 Score=23.23 Aligned_cols=204 Identities=12% Similarity=0.027 Sum_probs=105.2
Q ss_pred CcEEEEEecCCeEEEEEecC-------CceEEEEEeccCCCceEEEEEcCCCCEEEEEeCCCeEEEEe---ccCC-----
Q 016982 22 HAMVAFCPNNNEVHIYKLIQ-------EKWEKLHVLQKHDQIVSGIDWSVRSNRIVTVSHDRNSYVWN---QEGS----- 86 (379)
Q Consensus 22 ~~~l~~~~~dg~i~i~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~---~~~~----- 86 (379)
...+++.+.+|.|+--.+.+ +....-..+. ..+.+..+........|+.-+..|.++-.. +...
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 35677788889888766432 0001111222 223444444444555666666777765443 3322
Q ss_pred -ceeeeEEeecCCCceeEE-EECC--CCCEEEEEeCCCeEEEEEeecCCcee--EEEEEeecCCcCEEEEEEcCCCcEEE
Q 016982 87 -EWVPTLVILRLNRAALCV-QWSP--KENKFAVGSGAKTVCICYYEQENNWW--VSKLIRKRHDSSVTSVAWHPNNVFLA 160 (379)
Q Consensus 87 -~~~~~~~~~~~~~~v~~~-~~~~--~~~~l~~~~~d~~v~i~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~ 160 (379)
..+..+........|..+ ...+ +..+++..+.+|.++-..+..-.... -...+.....+.+..+........++
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 111111001123445544 3332 57789999999999987654422100 01111112244555555555556788
Q ss_pred EeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEECCCCCEEEEEcCCCeEEEEECC
Q 016982 161 TTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDV 234 (379)
Q Consensus 161 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~v~d~~ 234 (379)
..+..|.+..+..... +++.... ...+.....+.. ...|.++...+++.+|+..+..|.++.-.+.
T Consensus 162 l~T~~G~~~rf~~~~~--eip~~gr-----~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 162 LVSANGQSIRFSATDE--ALRPMGR-----ATSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEETTSEEEEEECCTT--TSCCCCT-----TSBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEECCCeEEEEECccc--ccCcCCc-----CCCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 8888999888876210 1111100 112222222322 3456666666666788888899999888754
No 388
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=29.96 E-value=2.1e+02 Score=26.31 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=36.7
Q ss_pred EEEEEeCCCeEE-EEeccCCc-------eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 68 RIVTVSHDRNSY-VWNQEGSE-------WVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 68 ~l~~~~~d~~i~-vw~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
.++.|+.+|.|. +....... .+..+.......+|..|.++++...|.+++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466778888764 33222211 1222233345678999999999999999998876665
No 389
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.71 E-value=3.5e+02 Score=25.18 Aligned_cols=229 Identities=6% Similarity=-0.069 Sum_probs=105.6
Q ss_pred eeEEE-eCCCCcEEEEEec-----CCeEEEEEecCCceEEEE-Eec-cCCC------ceEEEEEcCCCCEEEEEe-----
Q 016982 13 ITCHA-WSPDHAMVAFCPN-----NNEVHIYKLIQEKWEKLH-VLQ-KHDQ------IVSGIDWSVRSNRIVTVS----- 73 (379)
Q Consensus 13 i~~~~-~s~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~l~~~~----- 73 (379)
...+. ++|++++++.+-. -..++++|+.+++ .+. .+. .-.. ....++|..+...+++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~--~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKD--FVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTE--ECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCC--cCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCC
Confidence 34455 8999998877522 2379999999872 321 111 0000 113447764333333311
Q ss_pred -----CCCeEEEEeccCCceeeeEEeecCCCce-eEEEECCCCCE-----EEEEeC---CCeEEEEEeecCCceeEEEEE
Q 016982 74 -----HDRNSYVWNQEGSEWVPTLVILRLNRAA-LCVQWSPKENK-----FAVGSG---AKTVCICYYEQENNWWVSKLI 139 (379)
Q Consensus 74 -----~d~~i~vw~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~---d~~v~i~~~~~~~~~~~~~~~ 139 (379)
...+|+.|.+.+........+......+ .....++++++ +++.+. ...+.+.+...... ...+..
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL-KLQKIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC-EEEECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC-cceEee
Confidence 1246888888766322222223322232 33445666652 333332 23445544432221 112221
Q ss_pred eecCCcCEEEEEEcCCCcEEEEee----------CCCeEEEEeccccccccccccCCCccCCcccceEEE-e-ecCCcce
Q 016982 140 RKRHDSSVTSVAWHPNNVFLATTS----------TDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQ-L-DLSFSWA 207 (379)
Q Consensus 140 ~~~~~~~v~~~~~~p~~~~l~~~~----------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~v 207 (379)
..... .+..++++.+++... ..+.|.+.++.... ... ........ + ......+
T Consensus 288 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~l 352 (711)
T 4hvt_A 288 -MPSDA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLL----KTE-------SDKTSLKILFTPTANEVF 352 (711)
T ss_dssp -SCTTC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGG----SCG-------GGCTTCEEEECCCTTEEE
T ss_pred -cCCcc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCccc----ccc-------cccccceEEECCCCCCeE
Confidence 12211 123444666555331 35667788762100 000 00011111 2 2224467
Q ss_pred EEEEECCCCCEEEEEcCCC--eEEEEECCCCCceeee-eeee-cCCeeeEEEecCCc
Q 016982 208 FGVKWSPSGNTLAYVGHNS--MIYFVDDVGPSPLAQN-VAFR-DLPLRDVLFVSEKM 260 (379)
Q Consensus 208 ~~~~~sp~~~~l~~~~~d~--~i~v~d~~~~~~~~~~-~~~~-~~~i~~~~~s~~~~ 260 (379)
..+.+..+ .++++...++ .+.++|+.++.-.... +... ...+.....++++.
T Consensus 353 ~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~ 408 (711)
T 4hvt_A 353 NFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEE 408 (711)
T ss_dssp EEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCS
T ss_pred EEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCC
Confidence 78888876 4566666665 4677776554201122 2221 23455566666654
No 390
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=29.21 E-value=2.7e+02 Score=25.68 Aligned_cols=58 Identities=9% Similarity=0.038 Sum_probs=35.8
Q ss_pred EEEEEeCCCeEEEEEeecCCceeEEEEE-eecCCcCEEEEEEcCCC--cEEEEeeCCCeEEE
Q 016982 112 KFAVGSGAKTVCICYYEQENNWWVSKLI-RKRHDSSVTSVAWHPNN--VFLATTSTDGKCRV 170 (379)
Q Consensus 112 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~--~~l~~~~~d~~i~v 170 (379)
.++.|+.+|.|.-.-....... ....+ ......+|..+.++++. .+|.+++..+.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~-~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVH-IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEE-EEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCce-EEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 6778888988753322222211 22222 12345688899999887 88888887775554
No 391
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=26.32 E-value=2.4e+02 Score=25.43 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=41.9
Q ss_pred cceeEEEeC----CCC---cEEEEEecCCeEEEEEecCCc----eEEEEEec--cCCCceEEEEEcCCCCEEEEEeCCCe
Q 016982 11 QCITCHAWS----PDH---AMVAFCPNNNEVHIYKLIQEK----WEKLHVLQ--KHDQIVSGIDWSVRSNRIVTVSHDRN 77 (379)
Q Consensus 11 ~~i~~~~~s----~~~---~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (379)
...+.++.. .++ ..+..|+.+|.|.-.-..... ...+..+. ....+|..|.++++...|+.++.++.
T Consensus 362 ~~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V 441 (590)
T 3nvq_A 362 YHYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEV 441 (590)
T ss_dssp SCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEE
T ss_pred CcEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceE
Confidence 345555543 344 466778888887643332211 11222222 24568899999999889988887765
Q ss_pred EEE
Q 016982 78 SYV 80 (379)
Q Consensus 78 i~v 80 (379)
+++
T Consensus 442 ~qV 444 (590)
T 3nvq_A 442 SQV 444 (590)
T ss_dssp EEE
T ss_pred EEc
Confidence 554
No 392
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.50 E-value=4e+02 Score=24.53 Aligned_cols=69 Identities=12% Similarity=-0.013 Sum_probs=42.8
Q ss_pred cceeEEEeC----CCC---cEEEEEecCCeEEEE-EecCCceEEEEEec--cCCCceEEEEEcCCC--CEEEEEeCCCeE
Q 016982 11 QCITCHAWS----PDH---AMVAFCPNNNEVHIY-KLIQEKWEKLHVLQ--KHDQIVSGIDWSVRS--NRIVTVSHDRNS 78 (379)
Q Consensus 11 ~~i~~~~~s----~~~---~~l~~~~~dg~i~i~-~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~--~~l~~~~~d~~i 78 (379)
...+.|+.. .++ ..+..|+.+|.|.=. ....+ ...+..+. ....+|..|.++++. .+|+.++.++.+
T Consensus 397 ~~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~-~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~ 475 (663)
T 1olz_A 397 VNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHA-VHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVV 475 (663)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSS-EEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEE
T ss_pred CceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCC-ceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEE
Confidence 346777753 344 367788899987543 33332 12222222 235688999999987 888888877655
Q ss_pred EE
Q 016982 79 YV 80 (379)
Q Consensus 79 ~v 80 (379)
++
T Consensus 476 ~v 477 (663)
T 1olz_A 476 QA 477 (663)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 393
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=25.02 E-value=2.5e+02 Score=21.96 Aligned_cols=80 Identities=11% Similarity=0.108 Sum_probs=46.8
Q ss_pred CcCEEEEEEcCCCcEEEEeeCCCeEEEEeccccccccccccCCCccCCcccceEEEeecCCcceEEEEEC-CCCCEEEEE
Q 016982 144 DSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWS-PSGNTLAYV 222 (379)
Q Consensus 144 ~~~v~~~~~~p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~~~ 222 (379)
...|.++....++.+|+..+..|.++...+. +++.. .+.+.....+.. ...+..+... .++..++..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~----e~~~~-------~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~ 150 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFN----DLVAR-------NRAGKALITLPE-NAHVMPPVVIEDASDMLLAI 150 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGG----GGCCC-------STTCEECBCCCT-TCCBCCCEECCCTTCEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHH----Hhccc-------CcCceEEEEECC-CCEEEEEEEecCCCCEEEEE
Confidence 4456666443456678888999999998763 22111 122333333332 2344444444 345567778
Q ss_pred cCCCeEEEEECCC
Q 016982 223 GHNSMIYFVDDVG 235 (379)
Q Consensus 223 ~~d~~i~v~d~~~ 235 (379)
+.+|.+..++...
T Consensus 151 T~~G~~lrf~~~e 163 (256)
T 1zvt_A 151 TQAGRMLMFPVSD 163 (256)
T ss_dssp ETTSEEEEEEGGG
T ss_pred cCCCeEEEEEHHH
Confidence 8899988887654
No 394
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=23.54 E-value=4.6e+02 Score=24.54 Aligned_cols=209 Identities=11% Similarity=0.030 Sum_probs=0.0
Q ss_pred CCceEEEEEcCCC-CEEEEEeCCCeEEEEeccCCceeeeEEee-----c----CCCceeEEEECC-CCCEEEEEeCC---
Q 016982 54 DQIVSGIDWSVRS-NRIVTVSHDRNSYVWNQEGSEWVPTLVIL-----R----LNRAALCVQWSP-KENKFAVGSGA--- 119 (379)
Q Consensus 54 ~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-----~----~~~~v~~~~~~~-~~~~l~~~~~d--- 119 (379)
.+.|.+|+++|.+ +.++.+...+.|...+=....+.+..... + ....+.+++++| +.+.+.++...
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Q ss_pred ---CeEEEEEeecCCceeEEEEEee-----cCCcCEEEEEEcCCC-cEEEEeeCCCeEEEEeccccccccccccCCCccC
Q 016982 120 ---KTVCICYYEQENNWWVSKLIRK-----RHDSSVTSVAWHPNN-VFLATTSTDGKCRVFSTFIKGVDIKEKKEGTSSD 190 (379)
Q Consensus 120 ---~~v~i~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 190 (379)
+...+...+.++.|.....-.. ........++++|.. ..+..+...+.|..=+
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~S~------------------ 161 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWRST------------------ 161 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEEES------------------
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEEEC------------------
Q ss_pred CcccceEEEeecCC------cceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCceeeeeee------------------
Q 016982 191 TKFGEQILQLDLSF------SWAFGVKWSP-SGNTLAYVGHNSMIYFVDDVGPSPLAQNVAF------------------ 245 (379)
Q Consensus 191 ~~~~~~~~~~~~~~------~~v~~~~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------------------ 245 (379)
..++.-..+..-. ..+..++++| +...++.+..++. .+|-...+.+.-+.+..
T Consensus 162 -DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g-~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~ 239 (763)
T 3a0f_A 162 -DRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG-GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGT 239 (763)
T ss_dssp -STTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT-CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCC
T ss_pred -CCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC-eEEEECCCCCCccccCCCccccccccccccccccc
Q ss_pred ----ecCCeeeEEEecCCcEEEEEeC--------CCeEEEEecCCCcEE
Q 016982 246 ----RDLPLRDVLFVSEKMVIGVGFD--------CNPMVFAADETGIWT 282 (379)
Q Consensus 246 ----~~~~i~~~~~s~~~~~l~~~~d--------~~~~i~~~~~~~~~~ 282 (379)
.......+.+.+++.++++..+ ........+....|+
T Consensus 240 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~ 288 (763)
T 3a0f_A 240 AIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWK 288 (763)
T ss_dssp CCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEE
T ss_pred cccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceE
No 395
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.50 E-value=3.8e+02 Score=24.71 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=35.9
Q ss_pred EEEEEeCCCeEE-EEEeecCCc----eeEEEEEe-ecCCcCEEEEEEcCCCcEEEEeeCCCeEEE
Q 016982 112 KFAVGSGAKTVC-ICYYEQENN----WWVSKLIR-KRHDSSVTSVAWHPNNVFLATTSTDGKCRV 170 (379)
Q Consensus 112 ~l~~~~~d~~v~-i~~~~~~~~----~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~~~d~~i~v 170 (379)
.++.|+.+|.|. +........ ..+...+. .....+|..+.++++..+|.+++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 577788888875 322221110 00111111 245678899999999999999988876654
No 396
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=23.42 E-value=1.7e+02 Score=21.12 Aligned_cols=17 Identities=6% Similarity=0.141 Sum_probs=9.0
Q ss_pred EEeCCCCcEEEEEecCC
Q 016982 16 HAWSPDHAMVAFCPNNN 32 (379)
Q Consensus 16 ~~~s~~~~~l~~~~~dg 32 (379)
+.|.|++.+.|.+...|
T Consensus 115 ~eF~p~~~w~a~~~esG 131 (164)
T 1zso_A 115 IDFFPSNNFIVEDTKGK 131 (164)
T ss_dssp EEECCCSCEEEEETTSC
T ss_pred EEEecCCcEEEEECCCC
Confidence 44555555555554444
No 397
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=23.28 E-value=1.7e+02 Score=19.50 Aligned_cols=22 Identities=5% Similarity=0.170 Sum_probs=13.2
Q ss_pred eEEEecCCcEEEEEeCCCeEEEE
Q 016982 252 DVLFVSEKMVIGVGFDCNPMVFA 274 (379)
Q Consensus 252 ~~~~s~~~~~l~~~~d~~~~i~~ 274 (379)
.+.+..+|.++....++. .+|.
T Consensus 64 ~l~l~~dGNLVl~d~~~~-~lW~ 85 (119)
T 1b2p_A 64 RAVLQPDGVLVVITNENV-TVWQ 85 (119)
T ss_dssp EEEECTTSCEEEECTTCC-EEEE
T ss_pred EEEEccCCEEEEEeCCCc-EEEc
Confidence 466677788777544333 4555
No 398
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=22.38 E-value=2.5e+02 Score=24.67 Aligned_cols=69 Identities=10% Similarity=0.048 Sum_probs=41.7
Q ss_pred ceeEEEeCC----CC--cEEEEEecCCeEEEEEecCC-c-----eEEEEEec--cCCCceEEEEEcCCCCEEEEEeCCCe
Q 016982 12 CITCHAWSP----DH--AMVAFCPNNNEVHIYKLIQE-K-----WEKLHVLQ--KHDQIVSGIDWSVRSNRIVTVSHDRN 77 (379)
Q Consensus 12 ~i~~~~~s~----~~--~~l~~~~~dg~i~i~~~~~~-~-----~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (379)
..++|+... ++ ..+..|+.+|.|.=.-+... . ...+..+. ....+|..|.++++..+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 467766643 24 35677888887754433221 0 01112222 23568999999999999999988775
Q ss_pred EEE
Q 016982 78 SYV 80 (379)
Q Consensus 78 i~v 80 (379)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 399
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=21.72 E-value=3e+02 Score=24.86 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=35.1
Q ss_pred EEEEEeCCCeEEEEeccC-Cc---ee--eeEEeecCCCceeEEEECCCCCEEEEEeCCCeEEE
Q 016982 68 RIVTVSHDRNSYVWNQEG-SE---WV--PTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCI 124 (379)
Q Consensus 68 ~l~~~~~d~~i~vw~~~~-~~---~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 124 (379)
.+..|+.+|.|.-.-+.. +. .. ..+.......+|..+.++++...|.+++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 456677888765433322 21 11 11211234578899999998889999887766655
No 400
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=21.13 E-value=5e+02 Score=24.11 Aligned_cols=109 Identities=18% Similarity=0.280 Sum_probs=56.6
Q ss_pred ceEEEEEcCCC-CEEEEEeCCCeEEEEeccCCceeeeEEeec----CCCceeEEEECC-CCCEEEEEeCC-------CeE
Q 016982 56 IVSGIDWSVRS-NRIVTVSHDRNSYVWNQEGSEWVPTLVILR----LNRAALCVQWSP-KENKFAVGSGA-------KTV 122 (379)
Q Consensus 56 ~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~d-------~~v 122 (379)
.|..|+++|.. ..++.+...+.|...+-....+.+...... ....+.+++++| +.+.++++... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 78999999974 456666656666666544444444221001 124588999998 43444444321 123
Q ss_pred EEEEe-ecCCceeEEEEEee--c-C--CcCEEEEEEcCCC-cEEEEeeC
Q 016982 123 CICYY-EQENNWWVSKLIRK--R-H--DSSVTSVAWHPNN-VFLATTST 164 (379)
Q Consensus 123 ~i~~~-~~~~~~~~~~~~~~--~-~--~~~v~~~~~~p~~-~~l~~~~~ 164 (379)
.||.- +.++.|.....-.. . . ...+..++++|.. +.+..+..
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 44433 34444443321100 0 0 1124678898854 55555553
No 401
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=20.96 E-value=2e+02 Score=25.55 Aligned_cols=61 Identities=10% Similarity=0.035 Sum_probs=36.0
Q ss_pred CEEEEEeCCCeEEEEEeecCCceeEEEEEeecCCcCE-EEEEEcCCCcEEEEeeCCCeEEEE
Q 016982 111 NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSV-TSVAWHPNNVFLATTSTDGKCRVF 171 (379)
Q Consensus 111 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~p~~~~l~~~~~d~~i~v~ 171 (379)
..++.|+.+|.|.-.-+.......+...+......+| ..+.++++...|..++..+.++|-
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 3566788888876433322211112222212344567 488898888888888887766653
Done!