Query 016984
Match_columns 379
No_of_seqs 191 out of 1640
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 07:02:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016984.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016984hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 4.2E-85 1.4E-89 652.5 43.1 357 18-376 3-359 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 1.5E-81 5E-86 631.7 43.7 370 2-375 13-385 (520)
3 3ifg_A Succinate-semialdehyde 100.0 3.4E-81 1.2E-85 624.9 42.6 354 18-375 9-363 (484)
4 3rh9_A Succinate-semialdehyde 100.0 1.4E-80 4.7E-85 622.8 45.2 354 17-374 7-361 (506)
5 3ek1_A Aldehyde dehydrogenase; 100.0 1.6E-80 5.5E-85 622.0 41.8 354 17-374 28-382 (504)
6 2o2p_A Formyltetrahydrofolate 100.0 6.8E-80 2.3E-84 619.2 42.9 354 22-375 37-394 (517)
7 1bxs_A Aldehyde dehydrogenase; 100.0 1E-79 3.5E-84 616.3 44.0 373 1-374 1-374 (501)
8 3u4j_A NAD-dependent aldehyde 100.0 1.8E-79 6.2E-84 617.6 45.0 351 21-375 22-376 (528)
9 4f3x_A Putative aldehyde dehyd 100.0 1E-79 3.5E-84 615.8 42.5 356 14-375 18-376 (498)
10 1a4s_A ALDH, betaine aldehyde 100.0 2.3E-79 8E-84 614.4 44.2 350 21-375 19-369 (503)
11 1wnd_A Putative betaine aldehy 100.0 1.4E-79 4.8E-84 614.4 41.5 359 10-373 12-372 (495)
12 3k2w_A Betaine-aldehyde dehydr 100.0 1.9E-79 6.6E-84 614.6 41.9 350 20-373 11-361 (497)
13 3iwj_A Putative aminoaldehyde 100.0 3.7E-79 1.3E-83 613.4 44.0 355 19-375 5-366 (503)
14 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.6E-79 9E-84 615.6 41.8 350 22-375 27-377 (515)
15 3i44_A Aldehyde dehydrogenase; 100.0 4.9E-79 1.7E-83 610.7 43.2 348 21-373 25-373 (497)
16 3b4w_A Aldehyde dehydrogenase; 100.0 7.8E-79 2.7E-83 609.5 44.1 351 23-375 10-360 (495)
17 1o04_A Aldehyde dehydrogenase, 100.0 4.8E-79 1.7E-83 611.2 42.0 354 22-375 20-374 (500)
18 3jz4_A Succinate-semialdehyde 100.0 6.2E-79 2.1E-83 609.4 42.4 353 19-375 7-360 (481)
19 3r31_A BADH, betaine aldehyde 100.0 3.1E-79 1.1E-83 614.5 38.9 345 20-372 13-361 (517)
20 4e4g_A Methylmalonate-semialde 100.0 7.3E-79 2.5E-83 612.3 41.0 350 20-374 25-376 (521)
21 2imp_A Lactaldehyde dehydrogen 100.0 8.4E-79 2.9E-83 608.1 41.2 349 22-374 7-357 (479)
22 3prl_A NADP-dependent glyceral 100.0 9.3E-79 3.2E-83 609.9 41.1 346 22-374 12-363 (505)
23 2ve5_A BADH, betaine aldehyde 100.0 1.9E-78 6.5E-83 607.5 42.4 353 19-374 4-357 (490)
24 3qan_A 1-pyrroline-5-carboxyla 100.0 2E-78 7E-83 611.2 42.8 348 21-375 37-392 (538)
25 2w8n_A Succinate-semialdehyde 100.0 2.2E-78 7.6E-83 605.5 38.9 352 18-375 9-365 (487)
26 3r64_A NAD dependent benzaldeh 100.0 1E-77 3.5E-82 603.6 40.8 352 18-374 9-365 (508)
27 4dng_A Uncharacterized aldehyd 100.0 1.2E-77 4.2E-82 601.0 40.5 350 21-374 6-358 (485)
28 3pqa_A Lactaldehyde dehydrogen 100.0 1.2E-77 4E-82 599.3 39.0 341 24-374 2-346 (486)
29 1t90_A MMSDH, probable methylm 100.0 2.4E-77 8.2E-82 598.3 40.9 348 21-374 5-354 (486)
30 2j6l_A Aldehyde dehydrogenase 100.0 4.6E-77 1.6E-81 597.8 42.4 348 20-374 22-374 (500)
31 1euh_A NADP dependent non phos 100.0 4.2E-77 1.4E-81 595.3 39.3 344 22-374 5-354 (475)
32 1uxt_A Glyceraldehyde-3-phosph 100.0 4.9E-77 1.7E-81 597.3 38.9 345 22-374 19-368 (501)
33 3ty7_A Putative aldehyde dehyd 100.0 6E-77 2E-81 595.0 38.7 346 21-373 7-352 (478)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 8.9E-77 3E-81 597.8 39.0 347 21-374 37-391 (516)
35 3ju8_A Succinylglutamic semial 100.0 3.5E-76 1.2E-80 590.4 43.1 348 22-375 6-356 (490)
36 3ros_A NAD-dependent aldehyde 100.0 2.2E-76 7.5E-81 589.8 38.4 332 38-374 5-336 (484)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 9.1E-76 3.1E-80 593.3 36.9 349 21-375 63-422 (563)
38 3etf_A Putative succinate-semi 100.0 7.1E-74 2.4E-78 570.7 39.9 335 35-374 5-339 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 1.5E-73 5.2E-78 606.7 40.1 350 21-376 531-887 (1026)
40 2y53_A Aldehyde dehydrogenase 100.0 4.8E-73 1.6E-77 573.3 35.7 344 22-374 8-369 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 4.8E-72 1.6E-76 558.7 35.3 334 34-375 3-338 (474)
42 3v4c_A Aldehyde dehydrogenase 100.0 2.7E-69 9.3E-74 545.1 34.2 336 21-374 29-386 (528)
43 3lns_A Benzaldehyde dehydrogen 100.0 2.5E-68 8.4E-73 529.6 37.6 324 37-374 6-333 (457)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 4.1E-68 1.4E-72 534.4 34.3 327 33-373 3-351 (510)
45 3haz_A Proline dehydrogenase; 100.0 2.8E-66 9.6E-71 549.9 35.5 317 53-375 544-864 (1001)
46 3sza_A Aldehyde dehydrogenase, 100.0 6.6E-66 2.3E-70 512.7 36.0 307 56-374 15-325 (469)
47 3k9d_A LMO1179 protein, aldehy 100.0 6.7E-62 2.3E-66 484.2 20.7 313 52-374 5-330 (464)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 4.3E-60 1.5E-64 469.9 20.6 290 40-373 10-317 (463)
49 3my7_A Alcohol dehydrogenase/a 100.0 7.5E-59 2.6E-63 460.9 24.1 295 53-373 1-300 (452)
50 1vlu_A Gamma-glutamyl phosphat 100.0 1.3E-56 4.5E-61 445.4 17.5 268 59-337 14-306 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 6.9E-55 2.3E-59 431.3 24.7 269 58-336 25-315 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 3E-54 1E-58 424.7 23.8 265 58-332 13-296 (427)
53 4gic_A HDH, histidinol dehydro 86.7 22 0.00076 33.8 22.9 234 77-328 27-292 (423)
54 1b93_A Protein (methylglyoxal 74.7 5.4 0.00019 32.4 5.7 114 161-300 12-135 (152)
55 3v42_A Folliculin; tumor suppr 67.6 5.7 0.0002 34.5 4.5 69 177-253 21-89 (226)
56 1vmd_A MGS, methylglyoxal synt 66.0 6.1 0.00021 33.0 4.2 121 154-300 20-151 (178)
57 2xw6_A MGS, methylglyoxal synt 64.6 2.2 7.6E-05 34.0 1.2 87 173-270 17-112 (134)
58 2yvq_A Carbamoyl-phosphate syn 62.7 7.1 0.00024 31.3 4.0 63 206-270 60-132 (143)
59 3lap_A Arginine repressor; arg 47.3 1.2E+02 0.004 24.9 10.7 41 182-226 107-147 (170)
60 1b4b_A Arginine repressor; cor 46.5 40 0.0014 23.2 5.2 56 186-258 12-67 (71)
61 2zfz_A Arginine repressor; DNA 45.8 43 0.0015 23.6 5.4 37 186-226 20-56 (79)
62 1y5e_A Molybdenum cofactor bio 45.1 22 0.00076 29.1 4.4 55 197-251 28-85 (169)
63 3pzy_A MOG; ssgcid, seattle st 42.7 31 0.0011 28.1 4.8 53 199-252 26-80 (164)
64 1xxa_A ARGR, arginine represso 42.4 32 0.0011 24.3 4.2 38 186-226 14-51 (78)
65 2p5m_A Arginine repressor; alp 42.1 39 0.0013 24.1 4.7 56 186-258 24-79 (83)
66 3iwt_A 178AA long hypothetical 38.9 50 0.0017 27.0 5.6 56 196-251 36-94 (178)
67 2ioj_A Hypothetical protein AF 37.9 24 0.00081 27.7 3.3 50 217-267 53-102 (139)
68 3v4g_A Arginine repressor; vib 37.6 32 0.0011 28.7 4.0 40 184-226 114-153 (180)
69 3rfq_A Pterin-4-alpha-carbinol 35.8 35 0.0012 28.5 4.1 55 198-252 47-103 (185)
70 1g62_A Ribosome anti-associati 31.9 2.4E+02 0.0084 24.1 9.2 149 179-358 57-222 (224)
71 1b4a_A Arginine repressor; hel 30.0 80 0.0027 25.3 5.2 37 186-226 90-126 (149)
72 1wu2_A MOEA protein, molybdopt 29.0 17 0.00057 34.5 1.1 59 194-252 205-264 (396)
73 3mwd_B ATP-citrate synthase; A 27.6 3.5E+02 0.012 24.6 10.5 131 185-330 167-318 (334)
74 2v9v_A Selenocysteine-specific 26.7 59 0.002 25.0 3.9 82 288-372 34-124 (135)
75 2pjk_A 178AA long hypothetical 26.3 59 0.002 26.8 3.9 57 196-252 36-95 (178)
76 1use_A VAsp, vasodilator-stimu 26.2 68 0.0023 20.0 3.1 27 86-112 14-40 (45)
77 1mkz_A Molybdenum cofactor bio 25.4 49 0.0017 27.1 3.2 52 200-251 28-82 (172)
78 4g6u_B EC869 CDII; beta-augmen 25.3 1.3E+02 0.0046 24.7 5.8 83 23-113 12-97 (177)
79 2i2c_A Probable inorganic poly 24.1 87 0.003 27.6 4.9 87 190-295 5-94 (272)
80 3kbq_A Protein TA0487; structu 22.7 57 0.0019 26.9 3.1 55 196-250 19-74 (172)
81 2co9_A Thymus high mobility gr 22.1 2.3E+02 0.0079 20.6 6.9 39 76-114 55-93 (102)
82 3fgh_A Transcription factor A, 21.8 65 0.0022 21.5 2.8 36 68-105 30-65 (67)
83 2pbq_A Molybdenum cofactor bio 21.7 73 0.0025 26.2 3.6 53 198-251 23-81 (178)
84 1di6_A MOGA, molybdenum cofact 20.3 77 0.0026 26.6 3.5 51 200-250 23-78 (195)
85 2is8_A Molybdopterin biosynthe 20.1 57 0.0019 26.4 2.6 53 199-251 20-75 (164)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.2e-85 Score=652.51 Aligned_cols=357 Identities=41% Similarity=0.706 Sum_probs=341.1
Q ss_pred cccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 016984 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (379)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (379)
.++..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+
T Consensus 3 ~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~ 80 (490)
T 2wme_A 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILR 80 (490)
T ss_dssp CSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34456789999999988899999999999999999999999999999999999998 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhH
Q 016984 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (379)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 177 (379)
+|+++|++++++|+|||+.+++..|+..+++.++||+++.+++.+...+...+...+++++|+|||++|+|||||++..+
T Consensus 81 ~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~ 160 (490)
T 2wme_A 81 ERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhh
Confidence 99999999999999999999986469999999999999998888777776677788999999999999999999999999
Q ss_pred HHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHH
Q 016984 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (379)
Q Consensus 178 ~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (379)
++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 161 ~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (490)
T 2wme_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred hhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999875
Q ss_pred HhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCC
Q 016984 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (379)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~ 337 (379)
++..++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|||.|
T Consensus 241 ~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~ 320 (490)
T 2wme_A 241 ASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD 320 (490)
T ss_dssp HHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcc
Confidence 55377899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCCC
Q 016984 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHAD 376 (379)
Q Consensus 338 ~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~ 376 (379)
++++||||+++.+++++.++|++++++||++++||.+..
T Consensus 321 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~ 359 (490)
T 2wme_A 321 ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359 (490)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCC
T ss_pred ccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccC
Confidence 999999999999999999999999999999999998643
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.5e-81 Score=631.72 Aligned_cols=370 Identities=37% Similarity=0.641 Sum_probs=341.1
Q ss_pred CCCCCCCCCccccccCcccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhc--cCCCCCC
Q 016984 2 EGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPR 79 (379)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~ 79 (379)
+||+|+.........-....+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| + .|+.
T Consensus 13 ~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~ 90 (520)
T 3ed6_A 13 LGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQ 90 (520)
T ss_dssp ------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTT
T ss_pred cCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--cccc
Confidence 35555554433222112224578999999988788999999999999999999999999999999999999 7 8999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeee
Q 016984 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE 158 (379)
Q Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (379)
++..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++.++||+....++.+...+.. .+...+++++
T Consensus 91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (520)
T 3ed6_A 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE 169 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence 99999999999999999999999999999999999999996 999999999999999887766555433 4567889999
Q ss_pred cCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCC
Q 016984 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238 (379)
Q Consensus 159 P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~ 238 (379)
|+|||++|+|||||+.+.+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+
T Consensus 170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~ 249 (520)
T 3ed6_A 170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE 249 (520)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987789999999999
Q ss_pred cCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHH
Q 016984 239 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318 (379)
Q Consensus 239 v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~ 318 (379)
||.|+||||+.+|+.|++.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus 250 vd~V~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 328 (520)
T 3ed6_A 250 VDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328 (520)
T ss_dssp CSEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHH
Confidence 999999999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 319 f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
|+++|+++++++++|||.|+++++|||+++.+++++.++|++++++||++++||.+.
T Consensus 329 f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 385 (520)
T 3ed6_A 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRP 385 (520)
T ss_dssp HHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred HHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC
Confidence 999999999999999999999999999999999999999999999999999999864
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=3.4e-81 Score=624.94 Aligned_cols=354 Identities=36% Similarity=0.618 Sum_probs=337.8
Q ss_pred cccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 016984 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (379)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (379)
.+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (484)
T 3ifg_A 9 SLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVI 86 (484)
T ss_dssp GGSCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 33456789999999877788999999999999999999999999999999999998 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeeecCceEEEEcccchhHHhh
Q 016984 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (379)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 176 (379)
+++++|++++++|+|||+.+++. |+..+++.++||+....+..+...+.. .+...+++++|+|||++|+|||||+...
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (484)
T 3ifg_A 87 ANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMI 165 (484)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHH
Confidence 99999999999999999999986 999999999999998877666554432 4567889999999999999999999999
Q ss_pred HHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHH
Q 016984 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (379)
Q Consensus 177 ~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (379)
+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 166 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~ 245 (484)
T 3ifg_A 166 ARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMA 245 (484)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCC
Q 016984 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (379)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~ 336 (379)
.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.
T Consensus 246 ~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 324 (484)
T 3ifg_A 246 QSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGT 324 (484)
T ss_dssp HTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
|+++++|||+++.+++++.++|++++++||++++||.+.
T Consensus 325 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 363 (484)
T 3ifg_A 325 ESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH 363 (484)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc
Confidence 999999999999999999999999999999999999764
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.4e-80 Score=622.78 Aligned_cols=354 Identities=32% Similarity=0.576 Sum_probs=339.0
Q ss_pred CcccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 016984 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (379)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (379)
|-++..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|
T Consensus 7 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 84 (506)
T 3rh9_A 7 PLLENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGL 84 (506)
T ss_dssp GGGSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHH
T ss_pred CcccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 334567899999999887889999999999999999999999999999999999997 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeee-ecCceEEEEcccchhHHh
Q 016984 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTM 175 (379)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~N~P~~~ 175 (379)
++++++|++++++|+|||+.+++. |+..+++.++|+++...+..+...+...+...++++ +|+|||++|+|||||+..
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 163 (506)
T 3rh9_A 85 KENREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGM 163 (506)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHH
Confidence 999999999999999999999996 999999999999999988876655443556778889 999999999999999999
Q ss_pred hHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHH
Q 016984 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (379)
Q Consensus 176 ~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (379)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||++|.|+||||+.+|+.|+
T Consensus 164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~ 243 (506)
T 3rh9_A 164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI 243 (506)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCC
Q 016984 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (379)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p 335 (379)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 244 ~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 322 (506)
T 3rh9_A 244 VDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDG 322 (506)
T ss_dssp HHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCT
T ss_pred HHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
.|+++++|||+++.+++++.++|++++++||++++||.+
T Consensus 323 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 361 (506)
T 3rh9_A 323 MNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQP 361 (506)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCG
T ss_pred cccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCc
Confidence 999999999999999999999999999999999999975
No 5
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.6e-80 Score=621.98 Aligned_cols=354 Identities=37% Similarity=0.675 Sum_probs=337.1
Q ss_pred CcccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 016984 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (379)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (379)
+.+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|
T Consensus 28 ~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 105 (504)
T 3ek1_A 28 PSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLI 105 (504)
T ss_dssp GGGCCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred ccccccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHH
Confidence 334445789999999877788999999999999999999999999999999999998 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeeecCceEEEEcccchhHHh
Q 016984 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTM 175 (379)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 175 (379)
++++++|++++++|+|||+.+++. |+..+++.++||+.+..+..+...+.. ++...++.++|+|||++|+|||||+..
T Consensus 106 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 184 (504)
T 3ek1_A 106 IANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAM 184 (504)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHH
Confidence 999999999999999999999987 999999999999999877665554432 456788999999999999999999999
Q ss_pred hHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHH
Q 016984 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (379)
Q Consensus 176 ~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (379)
.+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 185 ~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 264 (504)
T 3ek1_A 185 ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM 264 (504)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCC
Q 016984 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (379)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p 335 (379)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 265 ~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 265 AQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred Hhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
.|+++++|||+++.+++++.++|++++++||++++||.+
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~ 382 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE 382 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 999999999999999999999999999999999999964
No 6
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=6.8e-80 Score=619.22 Aligned_cols=354 Identities=43% Similarity=0.782 Sum_probs=332.6
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.+.|+.+|..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46799999998666789999999999999999999999999999999999952259999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc----CCccceeeeecCceEEEEcccchhHHhhH
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 177 (379)
+|++++++|+|||+.++...|+..+++.++||++...++.+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999999723999999999999999887766554431 22356899999999999999999999999
Q ss_pred HHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHH
Q 016984 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (379)
Q Consensus 178 ~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (379)
++++|||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999998
Q ss_pred HhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCC
Q 016984 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (379)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~ 337 (379)
++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 87457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 338 ~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
++++||||+++.+++++.++|++++++||++++||...
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~ 394 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccC
Confidence 99999999999999999999999999999999999764
No 7
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1e-79 Score=616.26 Aligned_cols=373 Identities=53% Similarity=0.882 Sum_probs=338.6
Q ss_pred CCCCCCCCCCccccccCcccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCC-CCCC
Q 016984 1 MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPR 79 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~ 79 (379)
|..|..|....+..+.+. ...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.+ .|+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~ 79 (501)
T 1bxs_A 1 MSSSAMPDVPAPLTNLQF-KYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRT 79 (501)
T ss_dssp -------CCCCCCSSCCC-CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHH
T ss_pred CCcccCCcccCccccccc-cccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhh
Confidence 445555555544444332 23468999999987667899999999999999999999999999999999999511 5999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeec
Q 016984 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREP 159 (379)
Q Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 159 (379)
+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++||++.+.++.+...+...+...+++++|
T Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 159 (501)
T 1bxs_A 80 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEP 159 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecC
Confidence 99999999999999999999999999999999999998754599999999999999988876665444445567899999
Q ss_pred CceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCc
Q 016984 160 IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239 (379)
Q Consensus 160 ~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v 239 (379)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||++
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v 239 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999777899999999999
Q ss_pred CEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHH
Q 016984 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319 (379)
Q Consensus 240 ~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f 319 (379)
|.|+||||+.+|+.|++.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus 240 ~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 319 (501)
T 1bxs_A 240 DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 319 (501)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHH
Confidence 99999999999999999887567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 320 ~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++|+++++++++|||.|+++++|||+++.+++++.++|++++++|+++++||..
T Consensus 320 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 374 (501)
T 1bxs_A 320 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP 374 (501)
T ss_dssp HHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSE
T ss_pred HHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Confidence 9999999999999999999999999999999999999999999999999999975
No 8
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-79 Score=617.57 Aligned_cols=351 Identities=40% Similarity=0.693 Sum_probs=336.7
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHHHHHH
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADLIE 97 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (379)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|++++++|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 46799999999887788999999999 99999999999999999999999999 6 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeeecCceEEEEcccchhHHhh
Q 016984 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (379)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 176 (379)
+++++|++++++|+|||+.++.. |+..+++.++|+++.+.++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 99999999999999999999975 999999999999999887766555543 4567899999999999999999999999
Q ss_pred HHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHH
Q 016984 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (379)
Q Consensus 177 ~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (379)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred HHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCC
Q 016984 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (379)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~ 336 (379)
.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.
T Consensus 259 ~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 999 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
|+++++||++++.+++++.++|++++++||++++||.+.
T Consensus 338 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~ 376 (528)
T 3u4j_A 338 NERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERI 376 (528)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEE
T ss_pred CcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 999999999999999999999999999999999999753
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1e-79 Score=615.82 Aligned_cols=356 Identities=34% Similarity=0.589 Sum_probs=335.2
Q ss_pred cccCcccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 016984 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (379)
Q Consensus 14 ~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (379)
+.+..++..++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++
T Consensus 18 ~~~~~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a 94 (498)
T 4f3x_A 18 LYFQSMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIA 94 (498)
T ss_dssp -----CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHH
T ss_pred hhhhhccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHH
Confidence 34444556789999999987666 999999999999999999999999999999999998 899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCchhhh-hcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccch
Q 016984 94 DLIEEHAEVLAVLEALDAGKLHSWA-KMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNF 171 (379)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~a-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~ 171 (379)
++|++++++|++++++|+|||+.++ +. |+..+++.++||++.+.++.+...+. ..+...+++++|+|||++|+||||
T Consensus 95 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 173 (498)
T 4f3x_A 95 DAIEKEADEFAALEALNCGKPINAVKND-ELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNY 173 (498)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHT-HHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCch
Confidence 9999999999999999999999999 65 99999999999999988766554432 246678999999999999999999
Q ss_pred hHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHH
Q 016984 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (379)
Q Consensus 172 P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (379)
|+...+++++|||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|++.++++.|+.||+++.|+||||+.+|
T Consensus 174 P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G 252 (498)
T 4f3x_A 174 PLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATG 252 (498)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 99999999999888899999999999999999999999
Q ss_pred HHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccc
Q 016984 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (379)
Q Consensus 252 ~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 331 (379)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 253 ~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (498)
T 4f3x_A 253 KKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIR 331 (498)
T ss_dssp HHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcc
Confidence 99999999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCCCC
Q 016984 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGRHA 375 (379)
Q Consensus 332 vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga-~~~~GG~~~ 375 (379)
+|||.|+++++|||+++.+++++.++|++++++|| ++++||.+.
T Consensus 332 vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~ 376 (498)
T 4f3x_A 332 YNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG 376 (498)
T ss_dssp CSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC
T ss_pred cCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC
Confidence 99999999999999999999999999999999999 999999753
No 10
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.3e-79 Score=614.39 Aligned_cols=350 Identities=37% Similarity=0.647 Sum_probs=333.7
Q ss_pred ccceeEcCeEeeCCCCCe-EeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 21 FTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
..++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 356899999998766778 99999999999999999999999999999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 179 (379)
+++|++++++|+|||+.++.. |+..+++.++||++...++.++..+...+...++.++|+|||++|+|||||+...+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 999999999999999999986 9999999999999998877665444333446789999999999999999999999999
Q ss_pred HHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHh
Q 016984 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (379)
Q Consensus 180 ~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (379)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+ ++++.|+.||++|+|+||||+.+|+.|++.++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 254 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977 89999999999999999999999999999999
Q ss_pred hCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCC
Q 016984 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (379)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~ 339 (379)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|++
T Consensus 255 -~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 333 (503)
T 1a4s_A 255 -KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE 333 (503)
T ss_dssp -TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 340 ~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
+++|||+++.+++++.++|++++++||++++||...
T Consensus 334 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 369 (503)
T 1a4s_A 334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPL 369 (503)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 999999999999999999999999999999999764
No 11
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.4e-79 Score=614.43 Aligned_cols=359 Identities=37% Similarity=0.600 Sum_probs=332.7
Q ss_pred CccccccCcccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 016984 10 CKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89 (379)
Q Consensus 10 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L 89 (379)
.+|.+|...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|
T Consensus 12 ~~~~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L 88 (495)
T 1wnd_A 12 STSLYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECL 88 (495)
T ss_dssp ----------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHH
T ss_pred cccccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHH
Confidence 57789999998888999999997655 7899999999999999999999999999999999997 89999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeeecCceEEEEcc
Q 016984 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIP 168 (379)
Q Consensus 90 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p 168 (379)
++++++|++++++|++++++|+|||+.++...|+..+++.++|+++.+.++.++..+.. ++...++.++|+|||++|+|
T Consensus 89 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~P 168 (495)
T 1wnd_A 89 LKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAP 168 (495)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECC
Confidence 99999999999999999999999999999744899999999999998877665544432 34467899999999999999
Q ss_pred cchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCCh
Q 016984 169 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248 (379)
Q Consensus 169 ~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~ 248 (379)
||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|.+.++++.|+.||++|.|+||||+
T Consensus 169 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~ 247 (495)
T 1wnd_A 169 WNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSI 247 (495)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999 99999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHh
Q 016984 249 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328 (379)
Q Consensus 249 ~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~ 328 (379)
.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 248 ~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 326 (495)
T 1wnd_A 248 ATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVA 326 (495)
T ss_dssp HHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHH
Confidence 99999999999 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCC
Q 016984 329 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGR 373 (379)
Q Consensus 329 ~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~G-a~~~~GG~ 373 (379)
++++|||.|++++||||+++.+++++.++|++++++| |++++||.
T Consensus 327 ~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~ 372 (495)
T 1wnd_A 327 TLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 372 (495)
T ss_dssp TCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCS
T ss_pred hccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCc
Confidence 9999999999999999999999999999999999999 99999997
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.9e-79 Score=614.58 Aligned_cols=350 Identities=36% Similarity=0.625 Sum_probs=336.4
Q ss_pred cccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 11 KNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 456789999999887788999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
+++|++++++|+|||+.+++. |+..+++.++|++....++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 167 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGR 167 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHH
Confidence 999999999999999999986 99999999999999988876665443 2456788999999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 168 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~a 247 (497)
T 3k2w_A 168 KIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTS 247 (497)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred hhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCC
Q 016984 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (379)
Q Consensus 259 ~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~ 338 (379)
+ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|+
T Consensus 248 a-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~ 326 (497)
T 3k2w_A 248 A-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326 (497)
T ss_dssp T-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred h-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCC
Q 016984 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGR 373 (379)
Q Consensus 339 ~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 373 (379)
++++|||+++.+++++.++|++++++||++++||.
T Consensus 327 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~ 361 (497)
T 3k2w_A 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGK 361 (497)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC
T ss_pred CCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCc
Confidence 99999999999999999999999999999999997
No 13
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.7e-79 Score=613.35 Aligned_cols=355 Identities=44% Similarity=0.734 Sum_probs=335.2
Q ss_pred ccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHHHHH
Q 016984 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADL 95 (379)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~ 95 (379)
....++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.+ .|+.+|..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344678999999988778899999999999999999999999999999999999521 79999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCcee-ec---cCCccceeeeecCceEEEEcccch
Q 016984 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM---SRALQGYTLREPIGVVGHIIPWNF 171 (379)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~N~ 171 (379)
|++++++|++++++|+|||+.+++. |+..+++.++|++.+..++.+... +. ..+...+++++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999986 999999999999999876654321 11 135578899999999999999999
Q ss_pred hHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHH
Q 016984 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (379)
Q Consensus 172 P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (379)
|+...+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred HHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccc
Q 016984 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (379)
Q Consensus 252 ~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 331 (379)
+.|++.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 244 ~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999999 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 332 vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
+|||+++++++|||+++.+++++.++|++++++||++++||.+.
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 366 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRP 366 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCC
Confidence 99999999999999999999999999999999999999999764
No 14
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-79 Score=615.64 Aligned_cols=350 Identities=44% Similarity=0.717 Sum_probs=334.5
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999876778999999999999999999999999999999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccchhHHhhHHHH
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 180 (379)
+|++++++|+|||+.+++. |+..+++.++||++...+..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 9999999999999999985 99999999999999888776665443 345567899999999999999999999999999
Q ss_pred HhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhh
Q 016984 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (379)
Q Consensus 181 ~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (379)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||++|+|+||||+.+|+.|++.++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa- 262 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA- 262 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977788999999999999999999999999999999
Q ss_pred CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCC
Q 016984 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (379)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~ 340 (379)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 263 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 341 ~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
++|||+++.+++++.++|++++++||++++||...
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 377 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERA 377 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999753
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=4.9e-79 Score=610.74 Aligned_cols=348 Identities=36% Similarity=0.569 Sum_probs=329.5
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (379)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRS 102 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHH
Confidence 36789999999887788999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceee-eecCceEEEEcccchhHHhhHHH
Q 016984 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMK 179 (379)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~N~P~~~~~~~ 179 (379)
++|+++++.|+|||+.+++..|+..+++.++++++........... ..+...+++ ++|+|||++|+|||||+...+++
T Consensus 103 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 103 SDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998339999999999999877654322211 124557788 99999999999999999999999
Q ss_pred HHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHh
Q 016984 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (379)
Q Consensus 180 ~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (379)
++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred hCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCC
Q 016984 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (379)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~ 339 (379)
+++||+++|||||||+||++||| +.|++.++.++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|++
T Consensus 262 -~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 262 -NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp -TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred -hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 89999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCC
Q 016984 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGR 373 (379)
Q Consensus 340 ~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 373 (379)
+++|||+++.+++++.++|++++++||++++||.
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~ 373 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT 373 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 9999999999999999999999999999999994
No 16
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.8e-79 Score=609.46 Aligned_cols=351 Identities=39% Similarity=0.654 Sum_probs=332.9
Q ss_pred ceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 016984 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (379)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (379)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|..+|.++|++++++|++++++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987667899999999999999999999999999999999999522699999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHHh
Q 016984 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (379)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ 182 (379)
|++++++|+|||+.++...|+..+++.++||++.+.++.+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 169 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAP 169 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHHH
Confidence 99999999999999997239999999999999998887776554333446789999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCC
Q 016984 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (379)
Q Consensus 183 ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (379)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||++|.|+||||+.+|+.|++.++ ++
T Consensus 170 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa-~~ 247 (495)
T 3b4w_A 170 ALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA-EM 247 (495)
T ss_dssp HHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH-HT
T ss_pred HHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh-hc
Confidence 999999999999999999999999999999999999999999 8789999999999999999999999999999999 88
Q ss_pred CCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcc
Q 016984 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342 (379)
Q Consensus 263 ~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~ 342 (379)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|+++++
T Consensus 248 l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 327 (495)
T 3b4w_A 248 LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQI 327 (495)
T ss_dssp TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCB
T ss_pred CCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 343 Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
|||+++.+++++.++|++++++||++++||...
T Consensus 328 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 360 (495)
T 3b4w_A 328 GPLISEKQRTRVEGYIAKGIEEGARLVCGGGRP 360 (495)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEecCccc
Confidence 999999999999999999999999999999763
No 17
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=4.8e-79 Score=611.23 Aligned_cols=354 Identities=55% Similarity=0.876 Sum_probs=333.2
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (379)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+ .|+.+|..+|.++|++++++|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999987667899999999999999999999999999999999999510 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHH
Q 016984 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (379)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 180 (379)
++|++++++|+|||+.++...|+..+++.++||++.+.++.+...+...+...+++++|+|||++|+|||||+...++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999998754599999999999999988776654444345567899999999999999999999999999
Q ss_pred HhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhh
Q 016984 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (379)
Q Consensus 181 ~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (379)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||++|+|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998875
Q ss_pred CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCC
Q 016984 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (379)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~ 340 (379)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 341 ~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
++|||+++.+++++.++|++++++|+++++||...
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 374 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA 374 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC
Confidence 99999999999999999999999999999999764
No 18
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=6.2e-79 Score=609.40 Aligned_cols=353 Identities=37% Similarity=0.659 Sum_probs=336.5
Q ss_pred ccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 016984 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (379)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (379)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++
T Consensus 7 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 84 (481)
T 3jz4_A 7 LFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMME 84 (481)
T ss_dssp GCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CcccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3345789999999887889999999999999999999999999999999999997 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccchhHHhhH
Q 016984 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (379)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 177 (379)
++++|+++++.|+|||..+++. |+..+++.++|++....+..+...+. ..+...+++++|+|||++|+|||||++..+
T Consensus 85 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 163 (481)
T 3jz4_A 85 HQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMIT 163 (481)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHH
Confidence 9999999999999999999986 99999999999999887765554443 245678899999999999999999999999
Q ss_pred HHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHH
Q 016984 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (379)
Q Consensus 178 ~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (379)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~ 243 (481)
T 3jz4_A 164 RKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQ 243 (481)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCC
Q 016984 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (379)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~ 337 (379)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|
T Consensus 244 aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T 3jz4_A 244 CA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLD 322 (481)
T ss_dssp HT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTS
T ss_pred Hh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 338 ~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
+++++|||+++.+++++.++|++++++||++++||...
T Consensus 323 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~ 360 (481)
T 3jz4_A 323 NGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 360 (481)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred CcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999763
No 19
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.1e-79 Score=614.47 Aligned_cols=345 Identities=39% Similarity=0.661 Sum_probs=332.1
Q ss_pred cccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999887888999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhh----hcCceeeccCCccceeeeecCceEEEEcccchhHHh
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 175 (379)
+++|++++++|+|||+.++ |+..+++.++|++....+ ..+...+...+. .+++++|+|||++|+|||||+..
T Consensus 91 ~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999998 899999999999999877 666655544455 89999999999999999999999
Q ss_pred hHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHH
Q 016984 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (379)
Q Consensus 176 ~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (379)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 245 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 778999999999999999999999999999
Q ss_pred HHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCC
Q 016984 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (379)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p 335 (379)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 246 ~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 324 (517)
T 3r31_A 246 AAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP 324 (517)
T ss_dssp HHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCC
Q 016984 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372 (379)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG 372 (379)
.|+++++|||+++.+++++.++|++++++||++++||
T Consensus 325 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG 361 (517)
T 3r31_A 325 LDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361 (517)
T ss_dssp TSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 9999999999999999999999999999999999999
No 20
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.3e-79 Score=612.29 Aligned_cols=350 Identities=31% Similarity=0.440 Sum_probs=332.4
Q ss_pred cccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 25 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 102 (521)
T 4e4g_A 25 YELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLNDN 102 (521)
T ss_dssp EEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred hccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999887788999999999999999999999999999999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
+++|++++++|+|||+.+++. |+..+++.++||++......+...+. ..+...+++++|+|||++|+|||||+...++
T Consensus 103 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 181 (521)
T 4e4g_A 103 MNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMW 181 (521)
T ss_dssp HHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHH
Confidence 999999999999999999986 99999999999998776665544332 2456688999999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++ +.++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 182 ~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~a 260 (521)
T 4e4g_A 182 MFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDK-GAVDAILTHPDIAAVSFVGSTPIARYVYGTA 260 (521)
T ss_dssp HHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCCh-HHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999954 5679999999999999999999999999999
Q ss_pred hhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEecc-chHHHHHHHHHHHhccccCCCCC
Q 016984 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFD 337 (379)
Q Consensus 259 ~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~L~~~~~~~~vG~p~~ 337 (379)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|+++++++++|+|.|
T Consensus 261 a-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~ 339 (521)
T 4e4g_A 261 A-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTD 339 (521)
T ss_dssp H-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTC
T ss_pred h-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCC
Confidence 9 889999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 338 ~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++++|||+++.+++++.++|++++++||++++||.+
T Consensus 340 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 376 (521)
T 4e4g_A 340 EKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRD 376 (521)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSS
T ss_pred ccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcc
Confidence 9999999999999999999999999999999999975
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=8.4e-79 Score=608.14 Aligned_cols=349 Identities=33% Similarity=0.585 Sum_probs=333.2
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999876678999999999999999999999999999999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeeecCceEEEEcccchhHHhhHHHH
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 180 (379)
+|++++++|+|||+.+++. |+..+++.++|+++...++.+...+.. ++...++.++|+|||++|+|||||+...++++
T Consensus 85 ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 163 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163 (479)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 9999999999999999986 999999999999998877666554432 34567899999999999999999999999999
Q ss_pred HhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhh
Q 016984 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (379)
Q Consensus 181 ~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (379)
++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|+.||++|+|+||||+.+|+.|++.++
T Consensus 164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa- 242 (479)
T 2imp_A 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242 (479)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977778999999999999999999999999999999
Q ss_pred CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCC-CC
Q 016984 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD-PA 339 (379)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~-~~ 339 (379)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.| ++
T Consensus 243 ~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 322 (479)
T 2imp_A 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322 (479)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSS
T ss_pred ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 340 ~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++|||+++.+++++.++|++++++||++++||..
T Consensus 323 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 357 (479)
T 2imp_A 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKA 357 (479)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcc
Confidence 99999999999999999999999999999999975
No 22
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=9.3e-79 Score=609.85 Aligned_cols=346 Identities=32% Similarity=0.529 Sum_probs=330.8
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999887788999999999999999999999999999999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc--C----CccceeeeecCceEEEEcccchhHHh
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPTTM 175 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~N~P~~~ 175 (379)
+|++++++|+|||+.+++. |+..+++.++|+++...++.+...+.. + +...+++++|+|||++|+|||||++.
T Consensus 90 ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 168 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNL 168 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHH
Confidence 9999999999999999987 999999999999999887766554432 2 45678999999999999999999999
Q ss_pred hHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHH
Q 016984 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (379)
Q Consensus 176 ~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (379)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|+
T Consensus 169 ~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 248 (505)
T 3prl_A 169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 248 (505)
T ss_dssp HHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788999999999999999999999999999
Q ss_pred HHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCC
Q 016984 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (379)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p 335 (379)
+.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 249 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 325 (505)
T 3prl_A 249 EKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP 325 (505)
T ss_dssp HHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCC
Confidence 9876 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
. +++++|||+++.+++++.++|++++++||++++||..
T Consensus 326 ~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 363 (505)
T 3prl_A 326 E-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR 363 (505)
T ss_dssp T-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE
T ss_pred C-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC
Confidence 9 9999999999999999999999999999999999964
No 23
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.9e-78 Score=607.52 Aligned_cols=353 Identities=42% Similarity=0.712 Sum_probs=338.3
Q ss_pred ccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 016984 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (379)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (379)
++.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4567899999999887788999999999999999999999999999999999997 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
++++|+++++.|+|||..+++..|+..+++.++|+++...+..+...+...+...+++++|+|||++|+|||||+...++
T Consensus 82 ~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 161 (490)
T 2ve5_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHHH
Confidence 99999999999999999999844999999999999999887766655544567789999999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|.+.++++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a 241 (490)
T 2ve5_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred -hhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCC
Q 016984 259 -ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (379)
Q Consensus 259 -~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~ 337 (379)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|
T Consensus 242 ~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d 320 (490)
T 2ve5_A 242 SS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQD 320 (490)
T ss_dssp HH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 7 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 338 ~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++++|||+++.+++++.++|++++++||++++||.+
T Consensus 321 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~ 357 (490)
T 2ve5_A 321 ENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGER 357 (490)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 9999999999999999999999999999999999976
No 24
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2e-78 Score=611.22 Aligned_cols=348 Identities=33% Similarity=0.549 Sum_probs=332.4
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
.+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 467899999997 678999999999 999999999999999999999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHh-hhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
+++|++++++|+|||+.+++. |+..+++.++||++. .....+...+...+...++.++|+|||++|+|||||+...++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999997 999999999999998 455555555444466789999999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998878999999999999999999999999999999
Q ss_pred hhCC------CCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhcccc
Q 016984 259 ATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (379)
Q Consensus 259 ~~~~------~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~v 332 (379)
+ .+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 a-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 A-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp T-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred h-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 8 77 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 333 G~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
|||.|+++++|||+++.+++++.++|++++++| ++++||...
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~ 392 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD 392 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC
Confidence 999999999999999999999999999999999 999999753
No 25
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.2e-78 Score=605.46 Aligned_cols=352 Identities=36% Similarity=0.617 Sum_probs=333.3
Q ss_pred cccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 016984 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (379)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (379)
.+.+.++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+
T Consensus 9 ~~~~~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 84 (487)
T 2w8n_A 9 ALLRTDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMI 84 (487)
T ss_dssp CCCCCSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34445689999999754 7899999999999999999999999999999999997 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccchhHHhh
Q 016984 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (379)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 176 (379)
+++++|++++++|+|||+.++.. |+..+++.++|+++...+..+...+. ..+...++.++|+|||++|+|||||++..
T Consensus 85 ~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (487)
T 2w8n_A 85 QNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMI 163 (487)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 99999999999999999999986 99999999999999987766665443 24556789999999999999999999999
Q ss_pred HHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhhHhhhhhCCCcCEEEEeCChHHHHH
Q 016984 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (379)
Q Consensus 177 ~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (379)
++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+ |.+.++++.|+.||++|+|+||||+.+|+.
T Consensus 164 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 243 (487)
T 2w8n_A 164 TRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKI 243 (487)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999 866778999999999999999999999999
Q ss_pred HHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhc-ccc
Q 016984 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVV 332 (379)
Q Consensus 254 i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~-~~v 332 (379)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++
T Consensus 244 i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 244 LLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 999999 899999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 333 G~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
|||.|+++++|||+++.+++++.++|++++++|+++++||...
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~ 365 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 365 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC
Confidence 9999999999999999999999999999999999999999763
No 26
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-77 Score=603.57 Aligned_cols=352 Identities=35% Similarity=0.561 Sum_probs=335.8
Q ss_pred cccccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 016984 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (379)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (379)
.++.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (508)
T 3r64_A 9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLE 86 (508)
T ss_dssp TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHH
Confidence 34567899999999877788999999999999999999999999999999999997 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec--cCCccceeeeecCceEEEEcccchhHHh
Q 016984 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (379)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 175 (379)
+++++|+++++.|+|||..+++. |+..+++.++|++....+..+ ..+. .++...+++++|+|||++|+|||||+..
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 87 EHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 99999999999999999999987 999999999999998876655 4443 2456789999999999999999999999
Q ss_pred hHHHHHhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHH
Q 016984 176 FFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (379)
Q Consensus 176 ~~~~~~~ALaaGN~Vv~kps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (379)
.++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999777899999999999999999999999999
Q ss_pred HHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhcccc
Q 016984 255 MQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (379)
Q Consensus 255 ~~~~~~~--~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~v 332 (379)
++.++ . +++|+++|||||||+||++|||++.|++.++.++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 245 GELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99998 7 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 333 G~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
|||.++++++|||+++.++++++++|++++++||++++||..
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~ 365 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI 365 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC
Confidence 999999999999999999999999999999999999999964
No 27
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-77 Score=600.97 Aligned_cols=350 Identities=28% Similarity=0.485 Sum_probs=331.2
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (379)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 46789999999877788999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec--cCCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
++|++++++|+|||+.+++. |+..+++.++|+++......+...+. ..+...+++++|+|||++|+|||||+...++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999997 99999999999999987766655442 2456789999999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (379)
++++||++||+||+|||+.+|+++ .+|.++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999877799999999999999999999999999999
Q ss_pred HhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCC
Q 016984 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (379)
Q Consensus 258 ~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~ 337 (379)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|
T Consensus 243 aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 98 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 338 ~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++++||++++.+++++.++|++++++||++++||.+
T Consensus 322 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~ 358 (485)
T 4dng_A 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR 358 (485)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC
Confidence 9999999999999999999999999999999999964
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.2e-77 Score=599.28 Aligned_cols=341 Identities=30% Similarity=0.549 Sum_probs=320.1
Q ss_pred eeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 016984 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (379)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (379)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999997 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHHhH
Q 016984 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (379)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A 183 (379)
++++++|+|||..+++. |+..+++.++|+++...++.+...+. .+...+++++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPS-DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECC-TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecC-CCceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999986 99999999999999988776655443 25678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHh
Q 016984 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (379)
Q Consensus 184 LaaGN~Vv~kps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (379)
|++||+||+|||+.+|+++.+|++++.++ |+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988788999999999999999999999999999876
Q ss_pred hCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCC
Q 016984 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (379)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~ 339 (379)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 340 ~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++|||+++.+++++.++|++++++||++++||..
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~ 346 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR 346 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC
Confidence 99999999999999999999999999999999964
No 29
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.4e-77 Score=598.26 Aligned_cols=348 Identities=33% Similarity=0.523 Sum_probs=329.4
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (379)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876778999999999999999999999999999999999997 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceeeeecCceEEEEcccchhHHhhHHH
Q 016984 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (379)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 179 (379)
++|++++++|+|||+.+++. |+..+++.++|++.......++..+ ...+...+++++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 99999999999999999986 9999999999998776665555433 223456789999999999999999999999999
Q ss_pred HHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHh
Q 016984 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (379)
Q Consensus 180 ~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (379)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||++|+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5578999999999999999999999999999998
Q ss_pred hCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCce-EEEeccchHHHHHHHHHHHhccccCCCCCC
Q 016984 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (379)
Q Consensus 260 ~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~ 338 (379)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ +|+|+++|+++++++++|+|.++
T Consensus 241 -~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 -ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp -HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred -ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 889999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 339 ~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
++++|||+++.+++++.++|++++++||++++||..
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 354 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRE 354 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSS
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Confidence 999999999999999999999999999999999974
No 30
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=4.6e-77 Score=597.79 Aligned_cols=348 Identities=28% Similarity=0.460 Sum_probs=328.3
Q ss_pred cccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
+.++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999994 567899999999999999999999999999999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
+++|+++++.|+|||+.++.. |+..+++.++|+++...++.+...+.. ++...+++++|+|||++|+|||||+.+.++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 999999999999999999976 999999999999998877666544432 344567889999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~----~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (379)
++++||++||+||+|||+.+|+++.+|++++. ++|+|+|++|+|+| +.++++.|+.||++|+|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999988876 46999999999999 77899999999999999999999999999
Q ss_pred HHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCC
Q 016984 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (379)
Q Consensus 255 ~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~ 334 (379)
++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++||
T Consensus 256 ~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 99999 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 335 p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
|.|+++++|||+++.+++++.++|++++++|+++++||..
T Consensus 335 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~ 374 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV 374 (500)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred cccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcc
Confidence 9999999999999999999999999999999999999975
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.2e-77 Score=595.31 Aligned_cols=344 Identities=30% Similarity=0.482 Sum_probs=326.0
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 57899999997543 899999999999999999999999999999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc-CC----ccc-eeeeecCceEEEEcccchhHHh
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPTTM 175 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~N~P~~~ 175 (379)
+|+++++.|+|||+.+++. |+..+++.++|+++...++.+...+.. ++ ... ++.++|+|||++|+|||||+..
T Consensus 81 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 9999999999999999986 999999999999998877665544432 33 355 8999999999999999999999
Q ss_pred hHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHH
Q 016984 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (379)
Q Consensus 176 ~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (379)
.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|+.||++|+|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCC
Q 016984 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (379)
Q Consensus 256 ~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p 335 (379)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9876 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 336 ~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
.| ++++|||+++.+++++.++|++++++|+++++||..
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~ 354 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR 354 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 99 999999999999999999999999999999999863
No 32
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.9e-77 Score=597.28 Aligned_cols=345 Identities=29% Similarity=0.449 Sum_probs=326.7
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ ..|+.+|..+|.++|++++++|+++++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGR-WSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHH-HHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhh-hhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999753 7899999999999999999999999999999999994 159999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeecc--C---CccceeeeecCceEEEEcccchhHHhh
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R---ALQGYTLREPIGVVGHIIPWNFPTTMF 176 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 176 (379)
+|++++++|+|||+.++.. |+..+++.++||++...++.++..+.. . +...+++++|+|||++|+|||||+...
T Consensus 96 ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 174 (501)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHH
Confidence 9999999999999999985 999999999999998887766654432 2 336789999999999999999999999
Q ss_pred HHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHH
Q 016984 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (379)
Q Consensus 177 ~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (379)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++ ++++.|+.||++|+|+||||+.+|+.|++
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977 88999999999999999999999999999
Q ss_pred HHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCC
Q 016984 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (379)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~ 336 (379)
.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.
T Consensus 254 ~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 330 (501)
T 1uxt_A 254 VGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330 (501)
T ss_dssp HHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred hcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCcc
Confidence 876 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 337 ~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
|+++++|||+++.+++++.++|++++++||++++||..
T Consensus 331 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 368 (501)
T 1uxt_A 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR 368 (501)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 99999999999999999999999999999999999865
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6e-77 Score=594.96 Aligned_cols=346 Identities=37% Similarity=0.583 Sum_probs=329.3
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (379)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 84 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENRK 84 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 36789999999988888999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHH
Q 016984 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (379)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~ 180 (379)
++|++++++|+|||+.++...|+..+++.++|+++...+..+... +...++.++|+|||++|+|||||+...++++
T Consensus 85 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 85 DDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 999999999999999999334999999999999998877655432 2457899999999999999999999999999
Q ss_pred HhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhh
Q 016984 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (379)
Q Consensus 181 ~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (379)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa- 239 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA- 239 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT-
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999988789999999999999999999999999999998
Q ss_pred CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCC
Q 016984 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (379)
Q Consensus 261 ~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~ 340 (379)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 240 ~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCC
Q 016984 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGR 373 (379)
Q Consensus 341 ~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 373 (379)
++|||+++.++++++++|++++++||++++||.
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~ 352 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGP 352 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCS
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCc
Confidence 999999999999999999999999999999994
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=8.9e-77 Score=597.82 Aligned_cols=347 Identities=30% Similarity=0.516 Sum_probs=327.4
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCC-CCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
.+++||||+|+. ++.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 37 ~~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 357899999996 35789999999 6999999999999999999999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceee--ccCCccceeeeecCceEEEEcccchhHHhhH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 177 (379)
+++|++++++|+|||+.+++. |+..+++.++||++.+.++.+...+ ..++...++.++|+|||++|+|||||++..+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999999986 9999999999999988877665422 2234567899999999999999999999999
Q ss_pred HHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHH
Q 016984 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (379)
Q Consensus 178 ~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (379)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777899999999999999999999999999998
Q ss_pred Hhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhcccc
Q 016984 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (379)
Q Consensus 258 ~~~-----~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~v 332 (379)
++. +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 862 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 333 G~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
||| ++++++|||+++.+++++.++|++++++| ++++||..
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~ 391 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSB
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCcc
Confidence 999 99999999999999999999999999999 99999975
No 35
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.5e-76 Score=590.37 Aligned_cols=348 Identities=28% Similarity=0.407 Sum_probs=329.1
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (379)
.++||||+|+.+. +..+.++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 82 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRAD 82 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999754 56899999999999999999999999999999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHH
Q 016984 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (379)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~ 181 (379)
+|++++++|+|||+.+++. |+..+++.++|++.......+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus 83 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (490)
T 3ju8_A 83 ELARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIV 161 (490)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999986 999999999999998877766554333344567789999999999999999999999999
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhC
Q 016984 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (379)
Q Consensus 182 ~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (379)
+||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||++|.|+||||+.+|+.|++.++ .
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~ 239 (490)
T 3ju8_A 162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-G 239 (490)
T ss_dssp HHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-T
T ss_pred HHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-c
Confidence 9999999999999999999999999999999999999999999 5689999999999999999999999999999999 8
Q ss_pred CCCce-eeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccc-hHHHHHHHHHHHhccccCC-CCCC
Q 016984 262 NLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDP 338 (379)
Q Consensus 262 ~~~~~-~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~-~~~f~~~L~~~~~~~~vG~-p~~~ 338 (379)
+++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.|+
T Consensus 240 ~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~ 319 (490)
T 3ju8_A 240 QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP 319 (490)
T ss_dssp CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence 89998 7999999999999999999999999999999999999999999999997 9999999999999999999 9999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 339 ~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
.+++|||+++.+++++.++|++++++||++++||...
T Consensus 320 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 356 (490)
T 3ju8_A 320 APFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP 356 (490)
T ss_dssp CCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc
Confidence 9999999999999999999999999999999999753
No 36
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.2e-76 Score=589.81 Aligned_cols=332 Identities=26% Similarity=0.406 Sum_probs=320.2
Q ss_pred eEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 016984 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (379)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (379)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 488999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred hhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCC
Q 016984 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (379)
Q Consensus 118 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~ 197 (379)
++. |+..+++.++|+++.+.++.+...+...+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.
T Consensus 83 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 986 9999999999999998887766554445667899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCcee
Q 016984 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (379)
Q Consensus 198 ~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~i 277 (379)
+|+++.+|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777888 999999999999999999999999999 88999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 016984 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (379)
Q Consensus 278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~ 357 (379)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++++|||+++.+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCCC
Q 016984 358 IEHGKREGATLLTGGRH 374 (379)
Q Consensus 358 i~~a~~~Ga~~~~GG~~ 374 (379)
|++++++||++++||.+
T Consensus 320 i~~a~~~Ga~v~~gG~~ 336 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPE 336 (484)
T ss_dssp HHHHHHTTCEEEEECCC
T ss_pred HHHHHHcCCeEEecCCc
Confidence 99999999999999975
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=9.1e-76 Score=593.27 Aligned_cols=349 Identities=25% Similarity=0.361 Sum_probs=324.7
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
.+++||||+|+.+. ..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 63 ~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 63 AIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp ECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred cCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhc
Confidence 46799999999743 4678999998 799999999999999999999999997 899999999999999999999998
Q ss_pred -HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceeeeecCceEEEEcccchhHHhhH
Q 016984 100 -AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (379)
Q Consensus 100 -~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 177 (379)
+++|++++++|+|||+.++...++..+++.++|++..+.++.+.... ...+...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 99999999999999999998623999999999999998777654321 1223446677888999999999999999999
Q ss_pred HHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHH
Q 016984 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (379)
Q Consensus 178 ~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (379)
++++||| +||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 599999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCC------ceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccc
Q 016984 258 AATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (379)
Q Consensus 258 ~~~~~~~------~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~ 331 (379)
++ .+++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 298 aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~ 376 (563)
T 4e3x_A 298 VA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIK 376 (563)
T ss_dssp HH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhcc
Confidence 99 7777 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCCCC
Q 016984 332 VGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGRHA 375 (379)
Q Consensus 332 vG~p-~~~~~~~Gpl~~~~~~~~v~~~i~~a~~-~Ga~~~~GG~~~ 375 (379)
+||| .|++++||||+++.+++++.++|+++++ +||++++||...
T Consensus 377 vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~ 422 (563)
T 4e3x_A 377 VGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN 422 (563)
T ss_dssp BSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE
T ss_pred CCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC
Confidence 9999 9999999999999999999999999996 899999999754
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=7.1e-74 Score=570.72 Aligned_cols=335 Identities=27% Similarity=0.427 Sum_probs=319.0
Q ss_pred CCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 016984 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (379)
Q Consensus 35 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (379)
+...++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346789999999999999999999999999999999997 899999999999999999999999999999999999999
Q ss_pred hhhhhcCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEec
Q 016984 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (379)
Q Consensus 115 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kp 194 (379)
..+++. |+..+++.++|+++...+..+.......+...+++++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999986 9999999999999988776655422234567889999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCC
Q 016984 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (379)
Q Consensus 195 s~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~ 274 (379)
|+.+|+++.+|+++|.++|+|+|++|+++|+ .+.+..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCC
Confidence 9999999999999999999999999999994 567889999999999999999999999999999 88999999999999
Q ss_pred ceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 016984 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (379)
Q Consensus 275 ~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v 354 (379)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++++|||+++.+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCCC
Q 016984 355 LSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 355 ~~~i~~a~~~Ga~~~~GG~~ 374 (379)
.++|++++++||++++||..
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~ 339 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEK 339 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSB
T ss_pred HHHHHHHHHCCCEEEeCCcc
Confidence 99999999999999999974
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.5e-73 Score=606.69 Aligned_cols=350 Identities=33% Similarity=0.498 Sum_probs=331.6
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCC-CceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
..++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||+ .|+.+|..+|+++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 467899999996 467999999998 899999999999999999999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceeeeecCceEEEEcccchhHHhhHH
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 178 (379)
+++|++++++|+|||+.++.. |+..+++.++||+..+.++.+..... .++...++.++|+|||++|+|||||+...++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999987 99999999999999988776544332 3566788999999999999999999999999
Q ss_pred HHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 179 ~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccC
Q 016984 259 AT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (379)
Q Consensus 259 ~~-----~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG 333 (379)
+. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCCCC
Q 016984 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRHAD 376 (379)
Q Consensus 334 ~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~ 376 (379)
+|.|+++++|||+++.+++++.++|++++++| ++++||...+
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~ 887 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPA 887 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCC
Confidence 99999999999999999999999999999999 9999997643
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=4.8e-73 Score=573.27 Aligned_cols=344 Identities=24% Similarity=0.345 Sum_probs=313.7
Q ss_pred cceeEcCeEeeCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 016984 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (379)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (379)
+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.+|..+|.++|++++++|++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 56899999997544 579999999999999999998 9999999999999 57 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhhcC-------ceeecc-CC-ccceeeeecC-ceEEEEcccc
Q 016984 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-------EVLKMS-RA-LQGYTLREPI-GVVGHIIPWN 170 (379)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~N 170 (379)
++|++++++|+|||+.++.. |+..+++.++||+....++.+ +..+.. ++ ...++.++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999986 999999999999998766533 111211 12 2357889997 9999999999
Q ss_pred hhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChH
Q 016984 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (379)
Q Consensus 171 ~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~ 249 (379)
||+++.++++++||++||+||+|||+.+|+++.+|++++.++| +|+|++|+|+|++.+++..| +.+|+|+||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 79999999999654433333 5799999999999
Q ss_pred HHHHHHHHHh-hCCCCceeeeCCCCCceeecCCC-----CHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHH
Q 016984 250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (379)
Q Consensus 250 ~g~~i~~~~~-~~~~~~~~lelgG~~~~iV~~da-----d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L 323 (379)
+|+.|++.++ ..++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998752 26799999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 324 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
+++++++++|||.|++++||||+++.+++++.++|+++ .+||++++||..
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~ 369 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSA 369 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTT
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcc
Confidence 99999999999999999999999999999999999999 689999999974
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.8e-72 Score=558.66 Aligned_cols=334 Identities=28% Similarity=0.430 Sum_probs=311.7
Q ss_pred CCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 016984 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (379)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (379)
...++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++|+++|+++++.|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3567999999999999999999999999999999999998 89999999999999999999999999999999999999
Q ss_pred chhhhhcCcHHHHHHHHHHHHHhhhhhcCcee-ec-cCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEE
Q 016984 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (379)
Q Consensus 114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv 191 (379)
+.... . |+...++.+++++....+...... .. .++...+..++|+|||++|+|||||+++.+++++|||++||+||
T Consensus 81 ~~~~~-~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSITV-L-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHHH-H-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHHH-H-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 86554 4 899999999999988766543322 22 24455677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCC
Q 016984 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (379)
Q Consensus 192 ~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelg 271 (379)
+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|..| ++.|+||||+.+|+.|++.++ .+++|+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 55778888865 899999999999999999999 88999999999
Q ss_pred CCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHH
Q 016984 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (379)
Q Consensus 272 G~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~ 351 (379)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|+++|++++.++++|||.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCCCC
Q 016984 352 DRILSYIEHGKREGATLLTGGRHA 375 (379)
Q Consensus 352 ~~v~~~i~~a~~~Ga~~~~GG~~~ 375 (379)
+++.++|++++++|+++++||...
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~ 338 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVE 338 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCE
T ss_pred HHHHHHHHHHHhhCceeccCCccc
Confidence 999999999999999999999753
No 42
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-69 Score=545.15 Aligned_cols=336 Identities=24% Similarity=0.299 Sum_probs=305.6
Q ss_pred ccceeEcCeEeeCCCCCeEeeecCCCCceEE-EEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 016984 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (379)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (379)
..++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 29 ~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 29 KGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 367899999997532 99999999998 9999999999999999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHHhhhhh--cCceee----c---cCCccceeeeecCceEEEEcccc
Q 016984 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIPWN 170 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p~N 170 (379)
+++|++++++|+|||+.+++. |+..+++.++||++...+. .+.... . ..+...+++++|+|||++|+|||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 999999999999999999986 9999999999999988762 222221 0 12345688999999999999999
Q ss_pred hhHHhhH--HHHHhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEE
Q 016984 171 FPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244 (379)
Q Consensus 171 ~P~~~~~--~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~f 244 (379)
||+...+ +++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+.++++.|+.||+||+|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999865 99999999999999999999999999999875 46899999999999988789999999999999999
Q ss_pred eCChHHHHHHHHHHhhCCC--CceeeeCCCCCceeecCCC---CHHHHHHHHHHHHHhhcCCCccCCceEEEecc-chHH
Q 016984 245 TGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDE 318 (379)
Q Consensus 245 tGs~~~g~~i~~~~~~~~~--~~~~lelgG~~~~iV~~da---d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~ 318 (379)
|||+.+|+.|++.++ .++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|+|||++ ++|+
T Consensus 261 TGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 339 (528)
T 3v4c_A 261 TGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADR 339 (528)
T ss_dssp ESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHH
T ss_pred ECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHH
Confidence 999999999999999 788 9999999999999999999 88999999999999999999999999999997 9999
Q ss_pred HHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCCC
Q 016984 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 319 f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
|+++|++++++++.| +.+||++++.+.+++.++++ ++||++++||..
T Consensus 340 f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~ 386 (528)
T 3v4c_A 340 FTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES 386 (528)
T ss_dssp HHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC
T ss_pred HHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc
Confidence 999999999998754 57899999888888877763 489999999975
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.5e-68 Score=529.61 Aligned_cols=324 Identities=25% Similarity=0.397 Sum_probs=286.9
Q ss_pred CeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 016984 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (379)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (379)
..++++||.||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4678999999999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred hhhcCcHHHHHHHHHHHHHhhhhhcCc-eeec---cCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEE
Q 016984 117 WAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (379)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~ 192 (379)
+++..|+..+++.++|+++...++.+. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 997339999999999999888765432 2211 134567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCC
Q 016984 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (379)
Q Consensus 193 kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG 272 (379)
|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.+..|+. +.+|.|+||||+.+|+.|++.++ +++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCC
Confidence 99999999999999999999 99999999999 6678899988 79999999999999999999999 899999999999
Q ss_pred CCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHH
Q 016984 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352 (379)
Q Consensus 273 ~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~ 352 (379)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++|||+++.+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 7776 999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeCCCC
Q 016984 353 RILSYIEHGKREGATLLTGGRH 374 (379)
Q Consensus 353 ~v~~~i~~a~~~Ga~~~~GG~~ 374 (379)
++.++|+++. +++++||..
T Consensus 315 rv~~~i~~a~---~~~~~gg~~ 333 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQA 333 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCE
T ss_pred HHHHHHHhcC---CeEEeCCcc
Confidence 9999999863 599999964
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=4.1e-68 Score=534.45 Aligned_cols=327 Identities=21% Similarity=0.277 Sum_probs=299.9
Q ss_pred CCCCCeEeeecCCCCceE-EEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 016984 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (379)
Q Consensus 33 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (379)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446778999999999999 79999999999999999999997 899999999999999999999999999999999999
Q ss_pred CCchhhhhcCcHHHHHHHHHHHHHhhhh--hcCceeec----c-C-C-ccceeeeecCceEEEEcccchhHHhh--HHHH
Q 016984 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLKM----S-R-A-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (379)
Q Consensus 112 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~~----~-~-~-~~~~~~~~P~Gvv~~i~p~N~P~~~~--~~~~ 180 (379)
|||+.++.. |+..+++.++||++.+.+ ..+..... . + + ...+++++|+|||++|+|||||++.. .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999999986 999999999999998865 33333211 0 1 1 13578999999999999999999985 4999
Q ss_pred HhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHH
Q 016984 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (379)
Q Consensus 181 ~~ALaaGN~Vv~kps~~~~~~~~~l~~~l----~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (379)
++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+.++++.|+.||.||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56899999999999977789999999999999999999999999999
Q ss_pred HHhhCCC--CceeeeCCCCCceeecCCCCHH--HHHHHHHHHHHhhcCCCccCCceEEEecc-chHHHHHHHHHHHhccc
Q 016984 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV 331 (379)
Q Consensus 257 ~~~~~~~--~~~~lelgG~~~~iV~~dad~~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~L~~~~~~~~ 331 (379)
.++ +++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 998 665 9999999999999999999999 99999999999999999999999999999 99999999999999987
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCC
Q 016984 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGR 373 (379)
Q Consensus 332 vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~-~Ga~~~~GG~ 373 (379)
+ ||++++.+.+++.++|+++++ +||++++||.
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~ 351 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA 351 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 4 688999999999999999994 8999999986
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=2.8e-66 Score=549.87 Aligned_cols=317 Identities=32% Similarity=0.441 Sum_probs=301.1
Q ss_pred EeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHH
Q 016984 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (379)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (379)
++.++.+|+++|+++|++||+ .|+.+|..+|.++|+++++.|++++++|+++++.|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 899999999999999999997 899999999999999999999999999999999999999999986 99999999999
Q ss_pred HHHhhhhhcCce--eeccCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 016984 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (379)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~ 210 (379)
|+....+..+.. .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999988765543 233356678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHH
Q 016984 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (379)
Q Consensus 211 ~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~--~~~~~~lelgG~~~~iV~~dad~~~a~ 288 (379)
++|+|+|++|+|+|++.+ +..|+.||+|+.|+||||+.+|+.|++.+++. +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998776 99999999999999999999999999988832 489999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 016984 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (379)
Q Consensus 289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~ 368 (379)
+.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred EeCCCCC
Q 016984 369 LTGGRHA 375 (379)
Q Consensus 369 ~~GG~~~ 375 (379)
+||...
T Consensus 859 -~gg~~~ 864 (1001)
T 3haz_A 859 -HFAGPA 864 (1001)
T ss_dssp -EEECCC
T ss_pred -eccccC
Confidence 888754
No 46
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=6.6e-66 Score=512.74 Aligned_cols=307 Identities=26% Similarity=0.383 Sum_probs=280.5
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHHHHHH
Q 016984 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (379)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (379)
.+.+|+++++++|++||+ .|+.++..+|.++|++++++|++++++|++++++|+|||..++...|+..++..++++++
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999998 899999999999999999999999999999999999999999974599999999998887
Q ss_pred hhhhhcCce-ee---ccCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 016984 136 AADKIHGEV-LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (379)
Q Consensus 136 ~~~~~~~~~-~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~ 211 (379)
......... .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 665442211 11 11234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHH
Q 016984 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (379)
Q Consensus 212 aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i 291 (379)
+ +|+|++|+++|.+ +.+..|+.| ++|.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 455667777 8999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeC
Q 016984 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371 (379)
Q Consensus 292 ~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~G 371 (379)
++++|.|+||.|++++|||||++++|+|+++|+++++++ +|+|.++++++|||+++.+++++.++| +||++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999999 69999999
Q ss_pred CCC
Q 016984 372 GRH 374 (379)
Q Consensus 372 G~~ 374 (379)
|..
T Consensus 323 G~~ 325 (469)
T 3sza_A 323 GTG 325 (469)
T ss_dssp CCE
T ss_pred Ccc
Confidence 975
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=6.7e-62 Score=484.22 Aligned_cols=313 Identities=20% Similarity=0.225 Sum_probs=274.0
Q ss_pred EEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHHH
Q 016984 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (379)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 131 (379)
.++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+..++...+....++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 4556788999999999999998 89999999999999999999999999999999999999998875323333444333
Q ss_pred HHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHH----
Q 016984 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH---- 207 (379)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~---- 207 (379)
++.... +..+. .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~-~~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDM-KTIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTC-CCSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhcc-cccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 332221 11121 222345678899999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCC-CCCceeecCCCCHHH
Q 016984 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT 286 (379)
Q Consensus 208 ~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelg-G~~~~iV~~dad~~~ 286 (379)
++.++|+|+|++|+|++.+.+.++.|+.||++|.|+||||+.+ .+.++ .++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5689999999999999987789999999999999999999984 45566 788999 7888 999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHH-------hccccCCCC-CCCCcccccCCHHHHHHHHHHH
Q 016984 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYI 358 (379)
Q Consensus 287 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~-------~~~~vG~p~-~~~~~~Gpl~~~~~~~~v~~~i 358 (379)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 457899988 7889999999999999999999
Q ss_pred HHHHHcCCEEEeCCCC
Q 016984 359 EHGKREGATLLTGGRH 374 (379)
Q Consensus 359 ~~a~~~Ga~~~~GG~~ 374 (379)
+.++.+|+++++||..
T Consensus 315 ~~a~~~ga~vl~gg~~ 330 (464)
T 3k9d_A 315 GLTVPADARVLIAEET 330 (464)
T ss_dssp TCCCCTTCCEEEEECC
T ss_pred hhhhcCCCEEEEcCCC
Confidence 9999999999999964
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-60 Score=469.93 Aligned_cols=290 Identities=17% Similarity=0.165 Sum_probs=239.5
Q ss_pred eeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------C
Q 016984 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-------G 112 (379)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G 112 (379)
.++||.||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 5889999999999999999999999999999997 899999999999999999999999999999999999 7
Q ss_pred Cchh----hhhcCcHHHHHHHHHHHHHhhhhhcCceeecc---CCccceeeeecCceEEEEcccchhHHhhHHHHHhHhh
Q 016984 113 KLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185 (379)
Q Consensus 113 k~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALa 185 (379)
||+. ++.. |+..+++.++|+++.+.+..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9997 4654 999999999999988877666554321 3445789999999999999776 76666 89999999
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhC
Q 016984 186 AGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (379)
Q Consensus 186 aGN~Vv~kps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 261 (379)
+||+||+|||+.+|+++.+|++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6678999999999999999999999999999876
Q ss_pred CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCc
Q 016984 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (379)
Q Consensus 262 ~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~ 341 (379)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||++++|
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCC
Q 016984 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGR 373 (379)
Q Consensus 342 ~Gpl~~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 373 (379)
||+ ++++|++++++||+++.||.
T Consensus 295 -~p~--------~~~~i~~~~~~Ga~v~~G~~ 317 (463)
T 2h5g_A 295 -TPL--------FDQIIDMLRVEQVKIHAGPK 317 (463)
T ss_dssp -SHH--------HHHHHHHHHHTTCEEEECHH
T ss_pred -hHH--------HHHHHHHHHhCCCEEEeCCc
Confidence 343 34468999999999986653
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=7.5e-59 Score=460.86 Aligned_cols=295 Identities=20% Similarity=0.271 Sum_probs=255.3
Q ss_pred EeCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhcCcHHHHHHHH-H
Q 016984 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (379)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 131 (379)
++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++...++..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999997 8999999999999999999999999999999999999999998743566666655 3
Q ss_pred HHHHhhhhhcCceeeccCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016984 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (379)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~- 210 (379)
++.. .+..+ ..+...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3332 11111 1222234557889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHH
Q 016984 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (379)
Q Consensus 211 ---~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a 287 (379)
++|+|+|++|++++++.+.++.|+.||+++.|+||||+.+++ .++ ..+||+++|+|||||+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998888999999999999999999998654 455 678999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 016984 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (379)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~v~~~i~~a~~~Ga~ 367 (379)
++.++.++|+|+||.|++++|||||+++||+|+++|+++ +||++++.+++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999987777777
Q ss_pred EEeCCC
Q 016984 368 LLTGGR 373 (379)
Q Consensus 368 ~~~GG~ 373 (379)
+ +||.
T Consensus 296 v-~G~~ 300 (452)
T 3my7_A 296 I-VGQP 300 (452)
T ss_dssp G-TTCC
T ss_pred E-ecCc
Confidence 6 4664
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.3e-56 Score=445.42 Aligned_cols=268 Identities=17% Similarity=0.184 Sum_probs=239.3
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhcCcHHH-HHHHHHHH
Q 016984 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYY 133 (379)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~ 133 (379)
..+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..++++
T Consensus 14 ~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~ 91 (468)
T 1vlu_A 14 SSSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM 91 (468)
T ss_dssp CHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred hhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence 468899999999997 8999999999999999999999999999999999999998 7775238888 88889999
Q ss_pred HHhhhhhc------Cceeecc---CCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHH
Q 016984 134 AGAADKIH------GEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (379)
Q Consensus 134 ~~~~~~~~------~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~ 204 (379)
++..+... +...+.. .+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.+
T Consensus 92 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 169 (468)
T 1vlu_A 92 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFRE 169 (468)
T ss_dssp HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence 88776654 4433321 2455789999999999999999 9 9999999999999999999999999999999
Q ss_pred HHHHHH----H----cCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCce
Q 016984 205 FAHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (379)
Q Consensus 205 l~~~l~----~----aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~ 276 (379)
|++++. + +|+|+|++|+|+ +++++++.|..||++|.|+||||+.+|+.|++.+ +||+++|+|||||+
T Consensus 170 l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~ 244 (468)
T 1vlu_A 170 MAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI 244 (468)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred HHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccce
Confidence 999995 8 999999999999 6767899999999999999999999999999865 69999999999999
Q ss_pred eecCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhcccc---CCCCC
Q 016984 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFD 337 (379)
Q Consensus 277 iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~v---G~p~~ 337 (379)
||++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+
T Consensus 245 iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~ 306 (468)
T 1vlu_A 245 YLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL 306 (468)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH
T ss_pred EECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH
Confidence 999999999999999999999999 99999999999999 9999999999999987 88643
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=6.9e-55 Score=431.28 Aligned_cols=269 Identities=22% Similarity=0.227 Sum_probs=232.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhc-------CcHHHH
Q 016984 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (379)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (379)
.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|+++++.|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5899999999999998 89999999999999999999999999999999999999853 4431 268899
Q ss_pred HHHHHHHHHhhhhhcCceeec---cCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHH
Q 016984 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (379)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~ 203 (379)
++.+++++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 433332 23556789999999999999998 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceee
Q 016984 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (379)
Q Consensus 204 ~l~~~l----~~aGlP~g~v~vv~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV 278 (379)
+|++++ .++|+|+|++|+|+|.+. .+++.|..||++|.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998654 5788888999999999999999999998865 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhcccc---CCCC
Q 016984 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPF 336 (379)
Q Consensus 279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~v---G~p~ 336 (379)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |||.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence 9999999999999999999999 9999999999999999999999999999988 7753
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3e-54 Score=424.70 Aligned_cols=265 Identities=18% Similarity=0.206 Sum_probs=239.3
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhc-------CcHHHH
Q 016984 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKM-------GDIPGA 126 (379)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~~ 126 (379)
.+++++++++|++||+ .|+.+|..+|.++|++++++|++++++|+++++.|+||+. .++.. .|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 3689999999999997 8999999999999999999999999999999999999986 45431 289999
Q ss_pred HHHHHHHHHhhhhhcCceeec---cCCccceeeeecCceEEEEcccchhHHhhHHHHHhHhhcCCEEEEecCCCChHHHH
Q 016984 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (379)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~ 203 (379)
++.+++|+++... .+...+. ..+...+++++|+|||++|+||| +...+++++|||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999987764 4443332 12445688999999999999986 4688999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceee
Q 016984 204 YFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (379)
Q Consensus 204 ~l~~~l~----~aGlP~g~v~vv~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV 278 (379)
+|++++. ++|+|+|++|+|+|. ++++++.|..||++|.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 689999999999984 456788999999999999999999999999876 4999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHhcccc
Q 016984 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (379)
Q Consensus 279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~~~~v 332 (379)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 296 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV 296 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999 9999999999999999999999999998876
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=86.71 E-value=22 Score=33.78 Aligned_cols=234 Identities=18% Similarity=0.191 Sum_probs=121.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC-c------hhhhhcCcH---------------HHHHHHHHHHH
Q 016984 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK-L------HSWAKMGDI---------------PGAANTLRYYA 134 (379)
Q Consensus 77 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~------~~~a~~~ev---------------~~~~~~l~~~~ 134 (379)
|+..+..+-.+....+.+-++++.|+-..-.++..-+ . +.-... |+ +.+.+.++.|.
T Consensus 27 r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~-ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 27 WSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRD-VLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHH-HHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHH-HHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 4555555556666777777777766655444443322 1 110111 22 22333333333
Q ss_pred HhhhhhcCceeeccCCccceeeeecCceEEEEccc---chhHHhhHHHHHhHhhcCCE-EEEe-cCCCChHHHHHHHHHH
Q 016984 135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCT-MIVK-PAEQTPLIALYFAHLA 209 (379)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~ALaaGN~-Vv~k-ps~~~~~~~~~l~~~l 209 (379)
... ..........+|.....++.|+--|++..|. .||.. .+...+||-.+|+. +|+. |++..-.....| -..
T Consensus 106 ~~Q-~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL-~AA 182 (423)
T 4gic_A 106 ERQ-KLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVL-AAA 182 (423)
T ss_dssp HHH-CCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHH-HHH
T ss_pred Hhc-ccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHH-HHH
Confidence 211 1122223334677777889999999999995 36654 44557899999986 3433 433221222222 234
Q ss_pred HHcCCCCCcEEEEeCCchhhHhhhhh----CCCcCEEEEeCChHHHHHHHHHHhhCCCCceeeeCCCCCceeec-CCCCH
Q 016984 210 KLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF-DDVDV 284 (379)
Q Consensus 210 ~~aGlP~g~v~vv~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~-~dad~ 284 (379)
..+|+. .+..-.|...-.+|.- -|.||.|+=.|..=+..+=....+ ..-+=+.-|-.--+||. +++|.
T Consensus 183 ~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~AGPSEilViAD~~a~p 255 (423)
T 4gic_A 183 YISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMVAGPSEILVISDGRTDP 255 (423)
T ss_dssp HHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCCCCCCEEEEEECSCSCH
T ss_pred HhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCcccccccceEEEEeCCCCCH
Confidence 456664 3333334333334432 688999999999776543222211 12222233444444543 45899
Q ss_pred HHHHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHHHHHHh
Q 016984 285 NTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328 (379)
Q Consensus 285 ~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L~~~~~ 328 (379)
+..+..++.-+=+.. ..+.++|..+ ++|.++..+++.
T Consensus 256 ~~vAaDLlsQAEHd~-----~a~~iLvT~s--~~la~~V~~~i~ 292 (423)
T 4gic_A 256 DWIAMDLFSQAEHDE-----DAQAILISPD--AAHLEAVQASIE 292 (423)
T ss_dssp HHHHHHHHHHHTTCT-----TCEEEEEESC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCC-----CCeEEEEeCc--HHHHHHHHHHHH
Confidence 998888876554432 2345666554 344444444443
No 54
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=74.67 E-value=5.4 Score=32.45 Aligned_cols=114 Identities=17% Similarity=0.124 Sum_probs=76.1
Q ss_pred ceEEEEccc-chhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhhHhhhhhCC
Q 016984 161 GVVGHIIPW-NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (379)
Q Consensus 161 Gvv~~i~p~-N~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~-aGlP~g~v~vv~g-~~~~~~~~l~~~~ 237 (379)
|.++++..- .=+-...+.+-...++.|..++- |.-| ++.|.+ .|+|-..++-++. .++.+++.+. +-
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gT----a~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTT----GNLISRATGMNVNAMLSGPMGGDQQVGALIS-EG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTH----HHHHHHHHCCCCEEECCGGGTHHHHHHHHHH-TT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHH----HHHHHHHhCceeEEEEecCCCCCchHHHHHH-CC
Confidence 655555444 34555556666667778887764 2233 345555 8999776664443 2345666665 56
Q ss_pred CcCEEEEeCC-------hHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcC
Q 016984 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (379)
Q Consensus 238 ~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~G 300 (379)
.+++|.||-+ ...+..|.+.|. .+..|+.-.+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999877 457888999998 7778887654 567778877777764
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=67.58 E-value=5.7 Score=34.54 Aligned_cols=69 Identities=10% Similarity=0.141 Sum_probs=47.4
Q ss_pred HHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHH
Q 016984 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (379)
Q Consensus 177 ~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (379)
+..++..+.+||-||++.+. +-....+..+|..- +|.|++++++.. .+. ...-..+.+.++.+......
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccCcc
Confidence 45667788899999999987 44555566677777 999999998652 122 11234667777777665543
No 56
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=66.03 E-value=6.1 Score=32.97 Aligned_cols=121 Identities=17% Similarity=0.097 Sum_probs=80.1
Q ss_pred eeeeecC-ceEEEEcccc-hhHHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-Cchhh
Q 016984 154 YTLREPI-GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTA 229 (379)
Q Consensus 154 ~~~~~P~-Gvv~~i~p~N-~P~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~-aGlP~g~v~vv~g-~~~~~ 229 (379)
..+.-|. |.++++..-+ =+-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++-++. .++.+
T Consensus 20 ~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI 90 (178)
T 1vmd_A 20 YKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQI 90 (178)
T ss_dssp EEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHH
T ss_pred eeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchH
Confidence 3444453 7555555443 4555556666667778988774 33444 44555 8999766654443 23456
Q ss_pred HhhhhhCCCcCEEEEeCC-------hHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcC
Q 016984 230 GAAIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (379)
Q Consensus 230 ~~~l~~~~~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~G 300 (379)
++.+. +-.|++|.||-+ ...+..|.+.|. .+..|+.-.+ ..++.++.+.+++..
T Consensus 91 ~d~I~-~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 91 GAMIA-EGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHH-TTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHH-CCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 66665 568999999877 346788999998 7778887654 567888888887764
No 57
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=64.59 E-value=2.2 Score=34.00 Aligned_cols=87 Identities=16% Similarity=0.129 Sum_probs=55.2
Q ss_pred HHhhHHHHHhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhhHhhhhhCCCcCEEEEeCC---
Q 016984 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS--- 247 (379)
Q Consensus 173 ~~~~~~~~~~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~-aGlP~g~v~vv~-g~~~~~~~~l~~~~~v~~v~ftGs--- 247 (379)
-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++-++ +.++.+++.+. +-.+++|.||-+
T Consensus 17 ~~v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-~geIdlVInt~~pl~ 86 (134)
T 2xw6_A 17 EMVAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVA-EGRILAVIFFRDPLT 86 (134)
T ss_dssp HHHHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHH-TTCEEEEEEECCTTT
T ss_pred HHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHH-CCCccEEEEccCccc
Confidence 33333444445556666553 33344 44555 799987777666 54456666665 468999999977
Q ss_pred ----hHHHHHHHHHHhhCCCCceeeeC
Q 016984 248 ----TDVGRQVMQAAATSNLKPVSLEL 270 (379)
Q Consensus 248 ----~~~g~~i~~~~~~~~~~~~~lel 270 (379)
...+..|.+.+. .+..|+.-.+
T Consensus 87 ~~~h~~D~~~IrR~A~-~~~IP~~T~l 112 (134)
T 2xw6_A 87 AQPHEPDVQALLRVCD-VHGVPLATNP 112 (134)
T ss_dssp CCTTSCCSHHHHHHHH-HHTCCEECSH
T ss_pred CCCccchHHHHHHHHH-HcCCCeEcCH
Confidence 345678888888 6667776543
No 58
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=62.66 E-value=7.1 Score=31.28 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=46.3
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhhHhhhhhCCCcCEEEEeCCh-----HHHHHHHHHHhhCCCCceeeeC
Q 016984 206 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 270 (379)
Q Consensus 206 ~~~l~~aGlP~g~v~vv~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~g~~i~~~~~~~~~~~~~lel 270 (379)
++.|.+.|+|-..++-++.. . +.+.+.+.+ ..+++|.+|-+. ..+..|.+.+. .+..|++.++
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 45567899998877766643 2 456666654 579999998665 37888999988 7778887654
No 59
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=47.31 E-value=1.2e+02 Score=24.93 Aligned_cols=41 Identities=20% Similarity=0.319 Sum_probs=32.3
Q ss_pred hHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016984 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (379)
Q Consensus 182 ~ALaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~ 226 (379)
..=..||-||+|..|.. +..++.++...++| +++-.+.|++
T Consensus 107 sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGDD 147 (170)
T 3lap_A 107 STDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGDD 147 (170)
T ss_dssp EEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECSS
T ss_pred EEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecCC
Confidence 33457999999988765 67888888888777 6899998854
No 60
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=46.50 E-value=40 Score=23.24 Aligned_cols=56 Identities=9% Similarity=0.111 Sum_probs=39.6
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 186 aGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
.+|-+|+|..|.. +..++.++.+.++|. ++-.+.|++. .....=+.+.+..+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDDT-------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDDT-------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSSE-------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCCE-------------EEEEECCHHHHHHHHHHH
Confidence 6999999988655 678888888887776 8999988542 233344556666665544
No 61
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=45.79 E-value=43 Score=23.62 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=30.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016984 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (379)
Q Consensus 186 aGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~ 226 (379)
++|-+|+|..|-. +..++.++.+.++|. ++-.+.|++
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGDD 56 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 7999999988655 678888888887776 899888854
No 62
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=45.14 E-value=22 Score=29.08 Aligned_cols=55 Identities=22% Similarity=0.190 Sum_probs=38.6
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhh---CCCcCEEEEeCChHHH
Q 016984 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (379)
Q Consensus 197 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (379)
..-..+..|.+.+.+.|+..-...+++.+...+.+.|.. ....|.|..||++..+
T Consensus 28 i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 28 ETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp TTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred eccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 334566778899999998766666777655556666543 1368999999998644
No 63
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=42.68 E-value=31 Score=28.11 Aligned_cols=53 Identities=17% Similarity=0.191 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhC--CCcCEEEEeCChHHHH
Q 016984 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (379)
Q Consensus 199 ~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (379)
-.....|.+.+.+.|+..-...+++.+ ..+.+.|... ...|.|..||++..+.
T Consensus 26 Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 26 DRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred eHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 345677888999999977777888877 7777766542 3689999999887543
No 64
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=42.41 E-value=32 Score=24.30 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=31.5
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016984 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (379)
Q Consensus 186 aGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~ 226 (379)
.+|-+|+|..|.. +..++.++.+.+.+++++-.+.|++
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC
Confidence 6899999988654 7778888887778999999999854
No 65
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=42.07 E-value=39 Score=24.10 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=39.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHH
Q 016984 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (379)
Q Consensus 186 aGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (379)
.||-+|+|..|.. +..++.++.+.++|. ++-.+.|++. .....=+.+.+..+.+..
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDDT-------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGDDT-------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECSSE-------------EEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCCE-------------EEEEECCHHHHHHHHHHH
Confidence 7999999988655 778888888887776 8999988542 233334455666655544
No 66
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=38.95 E-value=50 Score=27.03 Aligned_cols=56 Identities=18% Similarity=0.001 Sum_probs=39.8
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhh---hCCCcCEEEEeCChHHH
Q 016984 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (379)
Q Consensus 196 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~---~~~~v~~v~ftGs~~~g 251 (379)
+..--...+|++.|.+.|+.---..+++.+...+..++. .....|.|..||+...+
T Consensus 36 ~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred CCCcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 334456778999999999876666677665445555553 34678999999998644
No 67
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=37.85 E-value=24 Score=27.73 Aligned_cols=50 Identities=16% Similarity=0.070 Sum_probs=33.6
Q ss_pred CcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCCCCcee
Q 016984 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267 (379)
Q Consensus 217 g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~ 267 (379)
|.+.+++|+..+........+.+.+|.+||+......+.+.+. +...|++
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~-~~~ipvl 102 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE-ERGVPVI 102 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH-HHTCCEE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH-HCCCeEE
Confidence 5688887876554333333257899999999888888777766 4444444
No 68
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=37.65 E-value=32 Score=28.70 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=33.5
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016984 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (379)
Q Consensus 184 LaaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~ 226 (379)
-..||-||+|..|-. +..++.++...++|++++-.+.|++
T Consensus 114 ~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 114 DHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp EECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred eecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 347999999988765 6778888888889999999999854
No 69
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=35.83 E-value=35 Score=28.50 Aligned_cols=55 Identities=18% Similarity=0.054 Sum_probs=40.3
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhC--CCcCEEEEeCChHHHH
Q 016984 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (379)
Q Consensus 198 ~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (379)
.-.....|.+.+.+.|+..-...+++.+...+.+.|... ...|.|..||++..+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 344667889999999987666777776555566666542 5789999999987554
No 70
>1g62_A Ribosome anti-association factor EIF6; alpha-beta barrel, velcro closure, subdomain, structural genomics, PSI; 2.50A {Saccharomyces cerevisiae} SCOP: d.126.1.1 PDB: 2x7n_B
Probab=31.88 E-value=2.4e+02 Score=24.14 Aligned_cols=149 Identities=15% Similarity=0.138 Sum_probs=93.5
Q ss_pred HHHhHhhcCCEE-EEecCCCChHHHHHHHHHHHHcCCCCCc-EEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHH
Q 016984 179 KVSPALAAGCTM-IVKPAEQTPLIALYFAHLAKLAGVPDGV-LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (379)
Q Consensus 179 ~~~~ALaaGN~V-v~kps~~~~~~~~~l~~~l~~aGlP~g~-v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (379)
.++.+|.+||.= ++-|+..+..--. .+++. +|.++ ++.++..-+.+|..+..+.++..|..--+.++-+.|..
T Consensus 57 ~lvG~l~~gN~nGllvp~~~~d~El~----~l~~~-l~~~v~V~~~~~~~~aiGn~i~~ND~~alV~p~l~~e~~~~i~d 131 (224)
T 1g62_A 57 RIIGRMTAGNRRGLLVPTQTTDQELQ----HLRNS-LPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISD 131 (224)
T ss_dssp SCHHHHCEECSSEEEEETTCCHHHHH----HHHHH-SCTTSEEEEECCCSSCHHHHEEECSSEEEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEecCceEEcCCcCCHHHHH----HHHhh-CCCCceEEEECCcCcceeEEEEEcCcEEEECCCCCHHHHHHHHH
Confidence 356678888874 5557665543333 34444 68875 78899887789999988888877777677888888877
Q ss_pred HHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHHhhcCCCc-cCCceEEEeccchHHHHHHHHHHHhc-cccCC
Q 016984 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC-VASSRVYVQEGIYDEFEKKLVEKAKA-WVVGD 334 (379)
Q Consensus 257 ~~~~~~~~~~~lelgG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C-~a~~~v~V~~~~~~~f~~~L~~~~~~-~~vG~ 334 (379)
... .+++--.=+.++.+ |-.| .+-+-.+||...-++-++.+.+.+.= +..|.
T Consensus 132 ~L~----VeV~~~tIag~~lV----------------------Gs~~v~nn~G~LVhP~~s~ee~~~i~d~L~V~v~~gT 185 (224)
T 1g62_A 132 VLG----VEVFRQTISGNILV----------------------GSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGT 185 (224)
T ss_dssp HHT----SEEEECCBTTBSCG----------------------GGSEEECSSCEEECTTCCHHHHHHHHHHHTSCEEECC
T ss_pred hhC----CcEEEEEecCcceE----------------------EEEEEEeCcEEEECCCCCHHHHHHHHHHhCCcEEEEE
Confidence 766 44443322223221 1011 11145799999888888888776531 22222
Q ss_pred C-------------CCCCCcccccCCHHHHHHHHHHH
Q 016984 335 P-------------FDPAVRQGPQVDKKQFDRILSYI 358 (379)
Q Consensus 335 p-------------~~~~~~~Gpl~~~~~~~~v~~~i 358 (379)
- .+.+.-+||-.+.....++++.+
T Consensus 186 vN~G~~~VGs~~vann~G~lvg~~TT~~El~~Ie~~f 222 (224)
T 1g62_A 186 VNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIF 222 (224)
T ss_dssp BTTTBSCHHHHEEECSSCEEEETTCCHHHHHHHHHHT
T ss_pred EcCCCCceeEEEEEECCEEEECCCCCHHHHHHHHHHh
Confidence 1 23455677777777777776653
No 71
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=29.95 E-value=80 Score=25.30 Aligned_cols=37 Identities=11% Similarity=0.149 Sum_probs=30.8
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016984 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (379)
Q Consensus 186 aGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~ 226 (379)
.+|-+|+|..|.. +..++.++...++|. ++-.+.|++
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDD 126 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD 126 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 7999999988655 778888888888876 999998854
No 72
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=28.95 E-value=17 Score=34.50 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhh-CCCcCEEEEeCChHHHH
Q 016984 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR 252 (379)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~-~~~v~~v~ftGs~~~g~ 252 (379)
|...--.....|...+.+.|...-...+++.+...+.+.|.. ....|.|..||++..|.
T Consensus 205 ~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 205 EGKIVETNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp TTCEECCHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred CCcEecchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 333333455678888999998666666776654455555432 12479999999988764
No 73
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=27.64 E-value=3.5e+02 Score=24.61 Aligned_cols=131 Identities=14% Similarity=0.140 Sum_probs=70.8
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe-CCc-------hhhHhhhhhCCCcCEEEEe---CChHHHHH
Q 016984 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GFG-------PTAGAAIASHMDIDKVSFT---GSTDVGRQ 253 (379)
Q Consensus 185 aaGN~Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~-g~~-------~~~~~~l~~~~~v~~v~ft---Gs~~~g~~ 253 (379)
..|+.-++ |....++.. +...+.+.|+. .=.++. |++ .+..+.|..+|+.+.|... |+... +.
T Consensus 167 ~~G~vgiv--SqSG~l~~~-i~~~~~~~g~G--~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~ 240 (334)
T 3mwd_B 167 RPGSVAYV--SRSGGMSNE-LNNIISRTTDG--VYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YK 240 (334)
T ss_dssp SCCSEEEE--ESCHHHHHH-HHHHHHHHSSC--EEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-HH
T ss_pred CCCCEEEE--eCchHHHHH-HHHHHHhcCCC--eEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-HH
Confidence 45776665 233334433 44445566663 334444 221 2456778899999998874 55555 56
Q ss_pred HHHHHhh-CCCCceeeeCCCCCceeecCCCCHHH---------HHHHHHHHHHhhcCCCccCCceEEEeccchHHHHHHH
Q 016984 254 VMQAAAT-SNLKPVSLELGGKSPLLIFDDVDVNT---------AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (379)
Q Consensus 254 i~~~~~~-~~~~~~~lelgG~~~~iV~~dad~~~---------a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~L 323 (379)
.++.+.+ ...||++.--.|.+....-..+-.-+ --..+..++|..+| +++.++ .+++.+.+
T Consensus 241 ~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aG--------v~~v~~-~~el~~~~ 311 (334)
T 3mwd_B 241 ICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAG--------VFVPRS-FDELGEII 311 (334)
T ss_dssp HHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTT--------CBCCSS-GGGHHHHH
T ss_pred HHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcC--------CeEcCC-HHHHHHHH
Confidence 6665552 35699999887777642110110000 01125667777788 444444 35666666
Q ss_pred HHHHhcc
Q 016984 324 VEKAKAW 330 (379)
Q Consensus 324 ~~~~~~~ 330 (379)
++.++++
T Consensus 312 ~~~~~~l 318 (334)
T 3mwd_B 312 QSVYEDL 318 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555554
No 74
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=26.73 E-value=59 Score=24.96 Aligned_cols=82 Identities=11% Similarity=0.118 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhcCCCccC--CceEEEeccchHHHHHHHHHHHhccccCCCCCCCCc-------ccccCCHHHHHHHHHHH
Q 016984 288 ADMALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR-------QGPQVDKKQFDRILSYI 358 (379)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a--~~~v~V~~~~~~~f~~~L~~~~~~~~vG~p~~~~~~-------~Gpl~~~~~~~~v~~~i 358 (379)
+...+.......+-.|.. ....+++.+.++++.+.+.+.+..+.--+|..++.. ..|-.+. .-+..+|
T Consensus 34 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~---~~~~~ll 110 (135)
T 2v9v_A 34 TRKLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPA---RVYQALL 110 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCH---HHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCH---HHHHHHH
Confidence 334444444333333443 234489999999999999999988655555544322 1222233 2356778
Q ss_pred HHHHHcCCEEEeCC
Q 016984 359 EHGKREGATLLTGG 372 (379)
Q Consensus 359 ~~a~~~Ga~~~~GG 372 (379)
+..+++|.-...|+
T Consensus 111 ~~l~~~g~l~~~~~ 124 (135)
T 2v9v_A 111 EEWSREGRLQLAAN 124 (135)
T ss_dssp HHHHHTTSEEECSS
T ss_pred HHHHHCCCEEecCC
Confidence 88889995444454
No 75
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=26.28 E-value=59 Score=26.80 Aligned_cols=57 Identities=16% Similarity=-0.014 Sum_probs=39.7
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhh---CCCcCEEEEeCChHHHH
Q 016984 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVGR 252 (379)
Q Consensus 196 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g~ 252 (379)
...--....|++.+.+.|...-...+++.+-..+.+.|.. ....|.|..||++..+.
T Consensus 36 ~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred eEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 4445567788999999998766666777655556666543 22389999999877543
No 76
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=26.21 E-value=68 Score=20.05 Aligned_cols=27 Identities=4% Similarity=0.016 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 016984 86 RGIMLKFADLIEEHAEVLAVLEALDAG 112 (379)
Q Consensus 86 ~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (379)
.++|..+...|.+-+++|.+++..|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888888998888877654
No 77
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=25.42 E-value=49 Score=27.10 Aligned_cols=52 Identities=21% Similarity=0.141 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhh---CCCcCEEEEeCChHHH
Q 016984 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (379)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (379)
..+..|++.+.+.|+..-...+++.+...+.+.|.. ....|.|..||++..+
T Consensus 28 ~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 28 TSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred ccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 455778888999998655566776654555555533 2248999999998643
No 78
>4g6u_B EC869 CDII; beta-augmentation, DNAse, toxin, immunity; 2.35A {Escherichia coli O157}
Probab=25.34 E-value=1.3e+02 Score=24.75 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=58.7
Q ss_pred ceeEcCeEe--eCCCCCeEeeecCCCCceEEEEeCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHHHHHHHHh
Q 016984 23 KLFINGEFV--DSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS-GAERRGIMLKFADLIEEH 99 (379)
Q Consensus 23 ~~~i~g~~~--~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~-~~~R~~~L~~~a~~l~~~ 99 (379)
..+.|+++. .+-++-.+...||. +.+..--+..+..++-+++..|.... +.++ .+++.+++.. +.+.+.
T Consensus 12 ~~~~n~~f~~I~T~sg~~l~~~Dp~-~~~~~L~~dvdd~~LG~~i~~AL~~S-----R~i~~~ee~~~~f~~--~~~~~~ 83 (177)
T 4g6u_B 12 NIFVTPDFLSVETYSGLGMTGRDPL-FSPRLLQPDVDDKSLGEEILQALSDS-----RTLDVLEERVAFFDL--EKSKEQ 83 (177)
T ss_dssp EEEECSSCEEEEEEEESSSEEECTT-SCCEEECTTCCHHHHHHHHHHHHHTC-----CBCCSHHHHHHHHCT--TTTHHH
T ss_pred EEEecCCEEEEEEEecCceEecCCC-CCCeeCCCCCCHHHHHHHHHHHHHhC-----CccCCHHHHHHHhcc--hhhhHH
Confidence 456777763 33345566777873 55566677788899999999888765 3667 8888888774 455666
Q ss_pred HHHHHHHHHHHhCC
Q 016984 100 AEVLAVLEALDAGK 113 (379)
Q Consensus 100 ~~~l~~~~~~e~Gk 113 (379)
..++.+.++...|.
T Consensus 84 yk~w~~~lm~~yGY 97 (177)
T 4g6u_B 84 YAAWIATLMEKYGY 97 (177)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCC
Confidence 77777777777774
No 79
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.14 E-value=87 Score=27.60 Aligned_cols=87 Identities=9% Similarity=0.040 Sum_probs=54.3
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhhCCCcCEEEEeCChHHHHHHHHHHhhCC--CCc-e
Q 016984 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN--LKP-V 266 (379)
Q Consensus 190 Vv~kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~--~~~-~ 266 (379)
+|.+|.+.+......+.+.|.+.|+.- .....|.|.--|+..+-...++... .. .+| +
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~-~~~~~~Pil 65 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYE-ERLDEIAFI 65 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTG-GGTTTCEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHh-hcCCCCCEE
Confidence 455654333334445555566666531 0246799999999999988888876 32 466 4
Q ss_pred eeeCCCCCceeecCCCCHHHHHHHHHHHH
Q 016984 267 SLELGGKSPLLIFDDVDVNTAADMALLGI 295 (379)
Q Consensus 267 ~lelgG~~~~iV~~dad~~~a~~~i~~~~ 295 (379)
-+.+|-.+.+-=....|++.+++.++.+.
T Consensus 66 GIn~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 66 GIHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EEESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EEeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 55666555332223457888998888764
No 80
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=22.69 E-value=57 Score=26.88 Aligned_cols=55 Identities=16% Similarity=-0.032 Sum_probs=37.8
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhh-CCCcCEEEEeCChHH
Q 016984 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDV 250 (379)
Q Consensus 196 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~-~~~v~~v~ftGs~~~ 250 (379)
...--.+..|++.+.+.|+..-...+++.+...+.+.|.. ..+.|.|..||++..
T Consensus 19 ~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~ 74 (172)
T 3kbq_A 19 RTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGP 74 (172)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSS
T ss_pred cEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcC
Confidence 3344566788999999999777677777655555555533 124788999988763
No 81
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.10 E-value=2.3e+02 Score=20.57 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=30.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 016984 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (379)
Q Consensus 76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (379)
.|..|+..+|..+...+...-+++..++...-....-+.
T Consensus 55 ~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~~ 93 (102)
T 2co9_A 55 MWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKS 93 (102)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 599999999999999888888888777776655544443
No 82
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=21.81 E-value=65 Score=21.46 Aligned_cols=36 Identities=8% Similarity=0.127 Sum_probs=26.4
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 016984 68 ARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAV 105 (379)
Q Consensus 68 A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 105 (379)
++.... .|..||..+|..+...+...-.++..++..
T Consensus 30 ~k~lg~--~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~~ 65 (67)
T 3fgh_A 30 LKTVKE--NWKNLSDSEKELYIQHAKEDETRYHNEMKS 65 (67)
T ss_dssp HHHHHH--HHHTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444 699999999999988887776666666543
No 83
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=21.74 E-value=73 Score=26.17 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=35.8
Q ss_pred ChHHHHHHHHHHH---HcCCCCCcEEEEeCCchhhHhhhhhC---CCcCEEEEeCChHHH
Q 016984 198 TPLIALYFAHLAK---LAGVPDGVLNVVPGFGPTAGAAIASH---MDIDKVSFTGSTDVG 251 (379)
Q Consensus 198 ~~~~~~~l~~~l~---~aGlP~g~v~vv~g~~~~~~~~l~~~---~~v~~v~ftGs~~~g 251 (379)
.-..+..|++.+. +.|+.. ...+++.+...+.+.|... ...|.|..||++..+
T Consensus 23 ~Dsn~~~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 23 EDISGKAIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp CCHHHHHHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred ecchHHHHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 3445677888787 788866 5667766555555555432 268999999997543
No 84
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=20.27 E-value=77 Score=26.57 Aligned_cols=51 Identities=14% Similarity=0.013 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHcCCC--CCcEEEEeCCchhhHhhhhh---CCCcCEEEEeCChHH
Q 016984 200 LIALYFAHLAKLAGVP--DGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDV 250 (379)
Q Consensus 200 ~~~~~l~~~l~~aGlP--~g~v~vv~g~~~~~~~~l~~---~~~v~~v~ftGs~~~ 250 (379)
.....|.+.+.+.|.. .-...+++.+...+.+.|.. ....|.|..||++..
T Consensus 23 ~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~ 78 (195)
T 1di6_A 23 KGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGP 78 (195)
T ss_dssp CHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 4567788889999886 33456676654455555543 236899999999863
No 85
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.10 E-value=57 Score=26.40 Aligned_cols=53 Identities=13% Similarity=0.126 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHhhhhh---CCCcCEEEEeCChHHH
Q 016984 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (379)
Q Consensus 199 ~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (379)
-..+..|++.+.+.|+..-...+++.+...+.+.|.. ....|.|..||++..+
T Consensus 20 D~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 20 DTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp CCHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3456778888888888655566776655556666543 2268999999998644
Done!