Query 016986
Match_columns 379
No_of_seqs 351 out of 1379
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 04:36:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016986.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016986hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-34 2.3E-39 272.9 31.3 206 47-255 163-381 (742)
2 COG2814 AraJ Arabinose efflux 100.0 2E-34 4.3E-39 247.6 27.3 288 49-374 11-299 (394)
3 COG2271 UhpC Sugar phosphate p 100.0 1.6E-34 3.4E-39 244.8 17.2 307 47-368 25-338 (448)
4 PRK14995 methyl viologen resis 100.0 1E-32 2.2E-37 254.8 28.0 317 48-370 3-344 (495)
5 PRK10642 proline/glycine betai 100.0 2.6E-32 5.6E-37 252.0 30.3 290 50-362 15-327 (490)
6 KOG0569 Permease of the major 100.0 2.3E-31 5E-36 235.7 34.7 323 50-372 10-356 (485)
7 PRK03545 putative arabinose tr 100.0 2.8E-32 6E-37 245.3 28.1 277 49-365 7-284 (390)
8 TIGR00887 2A0109 phosphate:H+ 100.0 4.4E-32 9.5E-37 251.3 30.1 322 46-370 11-384 (502)
9 PRK10077 xylE D-xylose transpo 100.0 2.7E-31 5.8E-36 245.7 34.5 316 48-370 9-355 (479)
10 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.7E-32 3.7E-37 247.6 24.8 298 48-353 5-311 (412)
11 PRK10406 alpha-ketoglutarate t 100.0 7.2E-32 1.6E-36 245.5 28.7 280 48-361 19-319 (432)
12 TIGR00879 SP MFS transporter, 100.0 5.6E-31 1.2E-35 243.7 34.5 322 47-369 24-367 (481)
13 KOG0254 Predicted transporter 100.0 3.8E-31 8.2E-36 245.1 31.9 325 49-374 43-382 (513)
14 PRK12307 putative sialic acid 100.0 5.3E-31 1.2E-35 240.0 27.8 297 47-368 14-313 (426)
15 TIGR00891 2A0112 putative sial 100.0 7.9E-31 1.7E-35 237.5 28.7 302 47-361 8-314 (405)
16 PRK10213 nepI ribonucleoside t 100.0 1.6E-30 3.4E-35 233.4 30.0 267 49-355 18-286 (394)
17 TIGR00898 2A0119 cation transp 100.0 2.4E-31 5.3E-36 247.4 23.9 291 72-372 110-406 (505)
18 PRK09556 uhpT sugar phosphate 100.0 4.8E-32 1E-36 249.0 19.0 299 48-360 26-333 (467)
19 PRK11551 putative 3-hydroxyphe 100.0 2.4E-30 5.1E-35 234.3 28.9 292 46-371 10-305 (406)
20 PRK09705 cynX putative cyanate 100.0 2.6E-30 5.7E-35 232.2 27.1 279 50-369 9-288 (393)
21 TIGR00711 efflux_EmrB drug res 100.0 1.2E-30 2.5E-35 241.9 24.8 312 52-369 3-339 (485)
22 PRK09952 shikimate transporter 100.0 1.2E-29 2.6E-34 230.9 29.9 286 48-364 19-329 (438)
23 PRK10091 MFS transport protein 100.0 4.1E-30 8.9E-35 230.4 26.3 279 53-370 5-284 (382)
24 KOG1330 Sugar transporter/spin 100.0 3.3E-32 7.3E-37 232.9 11.8 281 44-348 26-310 (493)
25 PRK11663 regulatory protein Uh 100.0 1.9E-30 4.1E-35 236.1 23.8 282 50-348 22-306 (434)
26 PRK15034 nitrate/nitrite trans 100.0 1.3E-29 2.8E-34 225.7 27.9 277 49-367 32-332 (462)
27 PRK15402 multidrug efflux syst 100.0 1.1E-29 2.4E-34 229.8 27.4 291 47-370 9-300 (406)
28 TIGR00710 efflux_Bcr_CflA drug 100.0 8.8E-30 1.9E-34 229.1 26.5 283 54-370 8-291 (385)
29 PLN00028 nitrate transmembrane 100.0 1.4E-29 3E-34 232.5 27.3 274 50-351 35-318 (476)
30 PRK15075 citrate-proton sympor 100.0 4.4E-29 9.4E-34 227.4 29.8 279 50-361 14-314 (434)
31 TIGR00903 2A0129 major facilit 100.0 9.8E-30 2.1E-34 225.1 24.1 248 64-350 4-252 (368)
32 PRK03699 putative transporter; 100.0 2.4E-29 5.1E-34 226.4 26.8 285 49-370 5-290 (394)
33 PRK15403 multidrug efflux syst 100.0 4.5E-29 9.7E-34 225.3 26.8 266 55-353 20-286 (413)
34 PRK10133 L-fucose transporter; 100.0 5.1E-29 1.1E-33 226.0 27.0 290 49-370 24-344 (438)
35 TIGR00893 2A0114 d-galactonate 100.0 7.8E-30 1.7E-34 230.2 21.6 278 61-352 4-282 (399)
36 TIGR00890 2A0111 Oxalate/Forma 100.0 6.7E-30 1.4E-34 229.1 21.0 286 52-372 5-291 (377)
37 TIGR00900 2A0121 H+ Antiporter 100.0 3.9E-29 8.4E-34 223.2 24.7 287 56-372 4-298 (365)
38 TIGR00894 2A0114euk Na(+)-depe 100.0 3.4E-29 7.4E-34 230.4 24.7 287 47-351 15-327 (465)
39 PRK10504 putative transporter; 100.0 1E-28 2.2E-33 227.8 26.8 312 52-370 11-346 (471)
40 TIGR00886 2A0108 nitrite extru 100.0 5.9E-29 1.3E-33 222.2 23.7 291 55-369 5-309 (366)
41 PF07690 MFS_1: Major Facilita 100.0 2.8E-29 6.1E-34 223.0 21.4 286 57-369 2-291 (352)
42 TIGR00895 2A0115 benzoate tran 100.0 1.1E-28 2.3E-33 222.9 24.3 303 48-356 14-320 (398)
43 PRK10473 multidrug efflux syst 100.0 2.6E-28 5.6E-33 219.9 26.6 284 55-373 7-291 (392)
44 PRK03893 putative sialic acid 100.0 5.1E-28 1.1E-32 224.7 26.7 316 48-366 17-356 (496)
45 PRK03633 putative MFS family t 100.0 1.5E-27 3.2E-32 213.9 28.3 277 51-368 6-282 (381)
46 PRK11273 glpT sn-glycerol-3-ph 100.0 3.7E-28 8E-33 222.3 24.6 287 49-352 27-322 (452)
47 KOG2533 Permease of the major 100.0 7.6E-29 1.7E-33 222.7 19.3 302 50-365 44-357 (495)
48 PRK11043 putative transporter; 100.0 1.6E-27 3.5E-32 215.4 26.9 267 60-364 15-281 (401)
49 COG2223 NarK Nitrate/nitrite t 100.0 2.4E-28 5.3E-33 207.7 19.9 288 49-372 12-305 (417)
50 PRK11195 lysophospholipid tran 100.0 9.2E-28 2E-32 215.5 24.4 272 55-358 7-278 (393)
51 PRK11102 bicyclomycin/multidru 100.0 7.1E-28 1.5E-32 216.0 23.5 266 66-363 6-272 (377)
52 PRK05122 major facilitator sup 100.0 1.6E-27 3.4E-32 215.3 25.5 280 50-374 14-302 (399)
53 TIGR00805 oat sodium-independe 100.0 1.1E-28 2.4E-33 231.8 18.7 305 54-367 36-415 (633)
54 TIGR00899 2A0120 sugar efflux 100.0 2.6E-27 5.7E-32 212.2 26.7 280 58-374 4-288 (375)
55 TIGR00881 2A0104 phosphoglycer 100.0 5.7E-29 1.2E-33 223.2 15.5 276 59-349 3-280 (379)
56 TIGR00885 fucP L-fucose:H+ sym 100.0 2.6E-27 5.7E-32 213.0 25.4 284 53-373 5-321 (410)
57 TIGR00712 glpT glycerol-3-phos 100.0 1.6E-27 3.5E-32 217.4 22.5 286 49-351 25-317 (438)
58 PRK11652 emrD multidrug resist 100.0 6E-27 1.3E-31 211.1 25.8 267 49-351 6-273 (394)
59 KOG0255 Synaptic vesicle trans 100.0 7.3E-27 1.6E-31 217.7 26.1 285 79-373 111-402 (521)
60 PRK12382 putative transporter; 100.0 1.6E-26 3.4E-31 208.2 26.8 276 53-374 17-302 (392)
61 TIGR00896 CynX cyanate transpo 100.0 1E-26 2.2E-31 206.7 24.8 267 65-370 14-282 (355)
62 TIGR00897 2A0118 polyol permea 100.0 2.8E-26 6.1E-31 206.9 27.9 271 53-355 15-291 (402)
63 KOG0253 Synaptic vesicle trans 100.0 2.1E-26 4.5E-31 191.1 24.2 320 46-372 73-432 (528)
64 PRK09874 drug efflux system pr 100.0 6.7E-26 1.4E-30 205.5 28.9 287 53-373 16-310 (408)
65 TIGR00892 2A0113 monocarboxyla 100.0 9.4E-27 2E-31 212.7 23.4 286 49-348 17-303 (455)
66 KOG2532 Permease of the major 100.0 7.4E-27 1.6E-31 209.6 21.8 277 78-372 65-354 (466)
67 TIGR00883 2A0106 metabolite-pr 100.0 3.3E-26 7.2E-31 206.4 25.6 271 61-362 3-296 (394)
68 PF00083 Sugar_tr: Sugar (and 100.0 1.4E-32 2.9E-37 252.3 -17.0 314 56-369 5-334 (451)
69 PF06609 TRI12: Fungal trichot 100.0 2.1E-25 4.6E-30 202.9 29.5 307 60-371 53-400 (599)
70 PRK10489 enterobactin exporter 99.9 6.7E-27 1.4E-31 212.3 18.3 284 58-374 24-312 (417)
71 KOG3764 Vesicular amine transp 99.9 6.3E-28 1.4E-32 202.4 9.6 260 83-376 101-363 (464)
72 cd06174 MFS The Major Facilita 99.9 7E-26 1.5E-30 201.0 22.6 261 55-373 3-264 (352)
73 TIGR00902 2A0127 phenyl propri 99.9 2E-25 4.4E-30 200.0 24.3 284 56-377 9-296 (382)
74 PRK11646 multidrug resistance 99.9 7.6E-25 1.7E-29 197.1 26.0 280 57-375 16-298 (400)
75 PRK11010 ampG muropeptide tran 99.9 1.3E-24 2.8E-29 200.0 27.3 279 53-365 14-303 (491)
76 PRK11128 putative 3-phenylprop 99.9 8.8E-25 1.9E-29 195.9 24.3 279 60-376 13-295 (382)
77 PRK10054 putative transporter; 99.9 4.2E-25 9.2E-30 198.4 21.6 279 55-370 11-293 (395)
78 PRK15011 sugar efflux transpor 99.9 5.8E-24 1.3E-28 191.3 28.0 273 56-368 20-299 (393)
79 TIGR00901 2A0125 AmpG-related 99.9 3.3E-24 7.1E-29 190.7 24.1 270 68-371 5-295 (356)
80 PRK08633 2-acyl-glycerophospho 99.9 1.1E-24 2.5E-29 221.7 23.6 280 71-374 30-322 (1146)
81 PRK11902 ampG muropeptide tran 99.9 2E-23 4.4E-28 188.4 26.6 274 58-365 6-290 (402)
82 TIGR00806 rfc RFC reduced fola 99.9 6.8E-24 1.5E-28 185.7 22.1 300 67-375 42-354 (511)
83 COG0738 FucP Fucose permease [ 99.9 2.9E-23 6.2E-28 175.8 24.9 290 52-375 14-326 (422)
84 KOG0252 Inorganic phosphate tr 99.9 2.1E-25 4.7E-30 190.6 11.3 322 46-373 36-400 (538)
85 TIGR00882 2A0105 oligosacchari 99.9 2.5E-23 5.4E-28 187.6 24.4 289 55-374 6-307 (396)
86 PRK06814 acylglycerophosphoeth 99.9 9.7E-24 2.1E-28 214.2 23.9 263 76-366 41-306 (1140)
87 PRK09528 lacY galactoside perm 99.9 6.4E-23 1.4E-27 186.4 22.9 288 58-375 17-316 (420)
88 PRK10207 dipeptide/tripeptide 99.9 1.6E-22 3.5E-27 185.3 23.4 175 51-228 14-193 (489)
89 KOG2504 Monocarboxylate transp 99.9 2.5E-23 5.3E-28 189.3 17.7 322 47-376 42-390 (509)
90 TIGR00889 2A0110 nucleoside tr 99.9 7.8E-21 1.7E-25 171.8 25.3 274 58-370 9-300 (418)
91 KOG2615 Permease of the major 99.9 2.1E-22 4.6E-27 168.4 13.7 140 90-232 70-217 (451)
92 TIGR00924 yjdL_sub1_fam amino 99.9 9.9E-21 2.1E-25 173.5 25.3 171 54-227 13-190 (475)
93 PF05977 MFS_3: Transmembrane 99.9 8.6E-21 1.9E-25 173.5 24.0 292 55-377 14-310 (524)
94 PTZ00207 hypothetical protein; 99.9 4.1E-20 8.8E-25 169.7 28.4 174 48-229 25-206 (591)
95 COG2807 CynX Cyanate permease 99.9 6E-20 1.3E-24 153.4 26.7 284 50-372 11-295 (395)
96 TIGR02718 sider_RhtX_FptX side 99.9 1.8E-19 3.9E-24 162.2 25.2 273 53-361 3-284 (390)
97 TIGR00792 gph sugar (Glycoside 99.9 1.2E-20 2.6E-25 172.6 17.8 266 73-371 22-307 (437)
98 PRK09584 tppB putative tripept 99.8 2.7E-18 5.9E-23 158.4 25.4 165 55-222 25-194 (500)
99 KOG2563 Permease of the major 99.8 2.5E-17 5.5E-22 141.7 24.0 291 44-364 38-345 (480)
100 TIGR01301 GPH_sucrose GPH fami 99.8 1.6E-17 3.5E-22 149.6 23.4 295 55-373 8-358 (477)
101 PRK10642 proline/glycine betai 99.8 5.9E-18 1.3E-22 156.6 17.2 181 70-252 269-458 (490)
102 PF13347 MFS_2: MFS/sugar tran 99.8 6.3E-18 1.4E-22 153.9 16.5 268 72-372 23-311 (428)
103 PRK15462 dipeptide/tripeptide 99.8 2.9E-16 6.3E-21 142.1 26.9 167 56-225 14-185 (493)
104 TIGR00788 fbt folate/biopterin 99.8 3.7E-17 7.9E-22 149.7 19.0 298 52-368 27-335 (468)
105 PRK09669 putative symporter Ya 99.7 7.2E-17 1.6E-21 147.7 18.0 259 72-366 31-309 (444)
106 KOG4686 Predicted sugar transp 99.7 5.4E-18 1.2E-22 136.6 8.8 285 48-363 41-342 (459)
107 PF03825 Nuc_H_symport: Nucleo 99.7 1.3E-15 2.7E-20 135.7 24.3 281 58-371 9-293 (400)
108 PRK10429 melibiose:sodium symp 99.7 2.5E-16 5.5E-21 145.0 17.7 280 58-368 13-313 (473)
109 TIGR01299 synapt_SV2 synaptic 99.7 7.7E-16 1.7E-20 146.0 19.4 138 92-231 599-736 (742)
110 TIGR01272 gluP glucose/galacto 99.7 7.5E-16 1.6E-20 133.4 17.6 204 136-370 5-227 (310)
111 PF03137 OATP: Organic Anion T 99.7 1E-18 2.3E-23 160.5 -0.5 301 57-363 9-386 (539)
112 TIGR00880 2_A_01_02 Multidrug 99.7 1.8E-16 3.9E-21 121.0 11.3 136 94-230 4-140 (141)
113 PRK09848 glucuronide transport 99.7 3.3E-15 7.1E-20 137.0 20.5 278 58-370 15-313 (448)
114 KOG2325 Predicted transporter/ 99.7 3.5E-15 7.5E-20 132.2 19.6 185 48-233 31-234 (488)
115 PRK11462 putative transporter; 99.7 1.2E-14 2.6E-19 133.0 23.0 253 73-361 32-303 (460)
116 PF01306 LacY_symp: LacY proto 99.7 1.4E-15 3.1E-20 133.0 14.1 289 58-377 14-315 (412)
117 KOG3626 Organic anion transpor 99.7 4.5E-16 9.8E-21 143.3 11.1 301 53-362 99-472 (735)
118 PRK11551 putative 3-hydroxyphe 99.7 4.2E-15 9.2E-20 134.7 16.3 158 71-230 240-397 (406)
119 PRK15011 sugar efflux transpor 99.7 9.2E-15 2E-19 131.7 18.1 155 72-230 237-392 (393)
120 PRK09528 lacY galactoside perm 99.6 1.7E-15 3.6E-20 137.8 12.9 141 90-231 264-406 (420)
121 COG2211 MelB Na+/melibiose sym 99.6 1.6E-14 3.5E-19 127.8 18.1 287 55-372 16-323 (467)
122 PRK05122 major facilitator sup 99.6 1.2E-14 2.6E-19 131.4 17.3 155 72-231 237-391 (399)
123 PF11700 ATG22: Vacuole efflux 99.6 2.2E-13 4.7E-18 123.8 25.2 252 91-365 73-363 (477)
124 TIGR00889 2A0110 nucleoside tr 99.6 1.8E-15 3.8E-20 137.0 11.7 160 72-231 229-405 (418)
125 TIGR00890 2A0111 Oxalate/Forma 99.6 2.9E-15 6.3E-20 134.2 12.9 147 72-221 226-374 (377)
126 PF05631 DUF791: Protein of un 99.6 7.5E-13 1.6E-17 112.3 24.4 264 71-369 54-327 (354)
127 cd06174 MFS The Major Facilita 99.6 1.8E-14 4E-19 127.7 15.6 163 62-227 186-350 (352)
128 KOG0569 Permease of the major 99.6 8.1E-14 1.8E-18 124.5 19.3 226 2-231 215-457 (485)
129 TIGR00902 2A0127 phenyl propri 99.6 4.7E-14 1E-18 126.6 16.8 156 65-225 219-375 (382)
130 TIGR00892 2A0113 monocarboxyla 99.6 2.3E-14 5E-19 131.4 14.7 164 58-223 248-415 (455)
131 PRK12382 putative transporter; 99.6 5.1E-14 1.1E-18 127.0 16.4 151 71-226 236-386 (392)
132 TIGR00899 2A0120 sugar efflux 99.6 8.7E-14 1.9E-18 124.7 16.3 149 77-229 226-374 (375)
133 PRK09874 drug efflux system pr 99.6 4.6E-14 9.9E-19 128.1 13.2 156 71-227 239-396 (408)
134 TIGR00887 2A0109 phosphate:H+ 99.5 2.2E-13 4.7E-18 126.7 17.2 163 69-231 306-491 (502)
135 PF03209 PUCC: PUCC protein; 99.5 1.9E-12 4.1E-17 111.7 21.2 266 77-372 6-296 (403)
136 COG3104 PTR2 Dipeptide/tripept 99.5 1.1E-12 2.3E-17 115.4 19.9 173 54-229 24-206 (498)
137 TIGR00883 2A0106 metabolite-pr 99.5 6.2E-14 1.3E-18 126.4 12.7 157 60-218 228-390 (394)
138 PRK09556 uhpT sugar phosphate 99.5 1.7E-13 3.6E-18 126.4 15.6 171 53-226 260-446 (467)
139 PRK10077 xylE D-xylose transpo 99.5 3.3E-13 7.2E-18 125.1 17.6 159 70-231 290-460 (479)
140 TIGR00893 2A0114 d-galactonate 99.5 1.4E-13 3E-18 124.2 14.6 168 55-225 219-395 (399)
141 TIGR00879 SP MFS transporter, 99.5 9.3E-14 2E-18 128.6 13.8 174 55-231 288-473 (481)
142 PRK09952 shikimate transporter 99.5 4.8E-13 1E-17 122.2 16.9 154 76-231 276-435 (438)
143 PRK10489 enterobactin exporter 99.5 1.9E-13 4E-18 124.4 14.0 158 71-231 243-402 (417)
144 PRK03633 putative MFS family t 99.5 4.6E-13 1E-17 120.2 15.8 149 72-226 221-369 (381)
145 TIGR00895 2A0115 benzoate tran 99.5 3.2E-13 7E-18 122.0 14.7 134 65-200 264-397 (398)
146 PRK03699 putative transporter; 99.5 5.9E-13 1.3E-17 120.1 16.1 155 70-228 224-379 (394)
147 PRK09705 cynX putative cyanate 99.5 1.1E-12 2.4E-17 118.1 17.2 160 69-232 223-385 (393)
148 PRK03545 putative arabinose tr 99.5 1.9E-12 4E-17 116.7 18.5 149 74-227 229-378 (390)
149 TIGR00891 2A0112 putative sial 99.5 3.6E-13 7.7E-18 122.0 13.7 140 72-213 259-400 (405)
150 TIGR00897 2A0118 polyol permea 99.5 9.1E-13 2E-17 119.1 15.8 155 69-228 240-400 (402)
151 TIGR00898 2A0119 cation transp 99.5 1E-12 2.2E-17 122.6 16.3 136 93-231 360-497 (505)
152 PRK11128 putative 3-phenylprop 99.5 2.2E-12 4.8E-17 115.9 16.9 147 72-223 226-373 (382)
153 PRK03893 putative sialic acid 99.5 5.6E-13 1.2E-17 124.1 12.1 143 71-216 295-440 (496)
154 COG2270 Permeases of the major 99.4 3E-11 6.4E-16 104.2 20.8 260 86-371 56-338 (438)
155 KOG2816 Predicted transporter 99.4 4.6E-12 9.9E-17 114.0 16.7 303 52-377 23-334 (463)
156 PF11700 ATG22: Vacuole efflux 99.4 4.7E-12 1E-16 115.2 16.8 180 50-231 280-470 (477)
157 PRK11273 glpT sn-glycerol-3-ph 99.4 8.8E-12 1.9E-16 114.5 17.4 154 70-226 272-432 (452)
158 TIGR00882 2A0105 oligosacchari 99.4 4.7E-12 1E-16 114.4 14.6 133 91-224 257-390 (396)
159 PF01770 Folate_carrier: Reduc 99.4 1.3E-10 2.8E-15 101.6 22.7 313 54-376 8-342 (412)
160 TIGR00900 2A0121 H+ Antiporter 99.4 1.9E-12 4E-17 115.6 11.1 131 72-204 232-364 (365)
161 PRK11663 regulatory protein Uh 99.4 9.7E-12 2.1E-16 113.6 15.3 163 60-226 252-421 (434)
162 PRK10504 putative transporter; 99.4 1.1E-11 2.5E-16 114.6 15.3 137 67-205 277-417 (471)
163 PRK11010 ampG muropeptide tran 99.4 1.7E-10 3.6E-15 106.8 22.8 155 74-231 246-405 (491)
164 PF05977 MFS_3: Transmembrane 99.4 1.1E-11 2.3E-16 114.1 14.6 152 71-225 238-390 (524)
165 TIGR00792 gph sugar (Glycoside 99.4 1.2E-11 2.7E-16 113.2 14.9 115 91-205 260-382 (437)
166 KOG2504 Monocarboxylate transp 99.4 1.1E-11 2.4E-16 113.5 14.3 177 51-229 298-476 (509)
167 PRK12307 putative sialic acid 99.4 8E-12 1.7E-16 114.1 13.6 137 71-210 251-389 (426)
168 PRK15075 citrate-proton sympor 99.4 2.4E-11 5.1E-16 111.1 16.0 137 67-205 254-396 (434)
169 TIGR02718 sider_RhtX_FptX side 99.3 2.8E-11 6.1E-16 109.1 14.7 148 73-223 230-385 (390)
170 PF06813 Nodulin-like: Nodulin 99.3 5.2E-11 1.1E-15 98.0 14.8 176 50-231 2-184 (250)
171 PRK10054 putative transporter; 99.3 1.9E-11 4E-16 110.2 13.1 132 91-224 247-379 (395)
172 PRK10406 alpha-ketoglutarate t 99.3 5.4E-11 1.2E-15 108.7 15.7 156 71-229 263-424 (432)
173 COG2814 AraJ Arabinose efflux 99.3 8.6E-11 1.9E-15 102.2 15.6 160 63-227 224-384 (394)
174 PLN00028 nitrate transmembrane 99.3 2.2E-11 4.9E-16 112.3 12.4 151 74-229 275-433 (476)
175 TIGR00712 glpT glycerol-3-phos 99.3 2.8E-11 6.1E-16 110.7 11.8 158 71-231 271-436 (438)
176 TIGR02332 HpaX 4-hydroxyphenyl 99.3 7.8E-11 1.7E-15 106.8 14.2 161 57-217 248-409 (412)
177 TIGR00881 2A0104 phosphoglycer 99.3 1.3E-11 2.9E-16 110.6 9.1 151 58-211 223-379 (379)
178 TIGR00896 CynX cyanate transpo 99.3 6.4E-11 1.4E-15 105.3 12.8 135 71-208 217-353 (355)
179 PF03825 Nuc_H_symport: Nucleo 99.3 2.3E-10 4.9E-15 102.3 15.9 173 56-230 212-397 (400)
180 TIGR01272 gluP glucose/galacto 99.3 2.7E-10 5.9E-15 98.8 15.8 157 52-214 141-300 (310)
181 PRK10213 nepI ribonucleoside t 99.3 3.9E-10 8.5E-15 101.6 17.1 144 74-221 240-383 (394)
182 COG2270 Permeases of the major 99.3 7.1E-11 1.5E-15 101.8 11.6 153 77-231 279-431 (438)
183 PRK10091 MFS transport protein 99.2 2.3E-10 5E-15 102.8 15.2 148 74-225 223-372 (382)
184 PRK15402 multidrug efflux syst 99.2 5.7E-10 1.2E-14 101.2 17.4 144 74-221 238-387 (406)
185 PRK11646 multidrug resistance 99.2 2.4E-10 5.1E-15 103.3 14.7 151 72-224 229-383 (400)
186 PF01306 LacY_symp: LacY proto 99.2 1.7E-10 3.6E-15 101.5 12.1 141 90-231 261-403 (412)
187 TIGR00894 2A0114euk Na(+)-depe 99.2 2.2E-10 4.9E-15 105.7 13.7 174 52-228 262-449 (465)
188 KOG4686 Predicted sugar transp 99.2 1.1E-09 2.5E-14 89.2 15.3 159 50-214 266-427 (459)
189 COG2271 UhpC Sugar phosphate p 99.2 2.2E-10 4.8E-15 98.8 11.8 172 51-225 252-430 (448)
190 PRK11902 ampG muropeptide tran 99.2 7.7E-10 1.7E-14 100.2 15.3 146 75-227 234-388 (402)
191 PRK09848 glucuronide transport 99.2 5.8E-10 1.2E-14 102.5 14.6 122 79-202 257-387 (448)
192 PRK08633 2-acyl-glycerophospho 99.2 5.5E-10 1.2E-14 114.7 16.1 142 75-218 257-399 (1146)
193 PF03092 BT1: BT1 family; Int 99.2 1.4E-09 3E-14 98.6 16.7 156 71-230 10-176 (433)
194 PF00083 Sugar_tr: Sugar (and 99.2 1.4E-13 3.1E-18 126.5 -9.4 160 68-231 270-439 (451)
195 TIGR00710 efflux_Bcr_CflA drug 99.2 1.2E-09 2.7E-14 98.2 15.6 132 77-213 233-370 (385)
196 TIGR00901 2A0125 AmpG-related 99.2 7.3E-10 1.6E-14 98.6 13.8 116 70-187 228-355 (356)
197 TIGR00711 efflux_EmrB drug res 99.1 5.9E-10 1.3E-14 103.6 13.1 131 72-204 276-411 (485)
198 KOG0253 Synaptic vesicle trans 99.1 8.1E-11 1.8E-15 99.2 6.3 131 98-231 391-521 (528)
199 PF07690 MFS_1: Major Facilita 99.1 4.5E-10 9.8E-15 99.7 11.1 123 70-194 225-352 (352)
200 PRK06814 acylglycerophosphoeth 99.1 9.3E-10 2E-14 112.7 14.6 143 73-217 247-410 (1140)
201 TIGR00926 2A1704 Peptide:H+ sy 99.1 3.1E-08 6.8E-13 93.5 23.4 151 73-226 10-179 (654)
202 TIGR00903 2A0129 major facilit 99.1 3.8E-09 8.3E-14 94.0 16.4 165 58-231 199-367 (368)
203 PRK10429 melibiose:sodium symp 99.1 2.2E-09 4.7E-14 99.2 15.3 113 91-203 269-393 (473)
204 COG0477 ProP Permeases of the 99.1 4E-09 8.7E-14 91.7 15.7 157 61-220 12-176 (338)
205 KOG0637 Sucrose transporter an 99.1 3.2E-09 6.9E-14 92.4 13.2 147 53-201 34-203 (498)
206 PRK09669 putative symporter Ya 99.1 4E-09 8.6E-14 96.8 14.9 115 91-205 267-390 (444)
207 PRK14995 methyl viologen resis 99.1 1.5E-09 3.3E-14 100.8 12.3 129 72-202 280-412 (495)
208 PF13347 MFS_2: MFS/sugar tran 99.1 2E-09 4.3E-14 98.3 12.8 146 55-203 229-384 (428)
209 PRK10473 multidrug efflux syst 99.0 2.8E-09 6.1E-14 96.2 12.9 132 77-216 230-361 (392)
210 PRK11195 lysophospholipid tran 99.0 9E-09 2E-13 92.8 15.8 139 76-217 231-370 (393)
211 PRK11102 bicyclomycin/multidru 99.0 1.1E-08 2.3E-13 91.9 16.2 121 76-199 220-345 (377)
212 KOG0254 Predicted transporter 99.0 1.5E-08 3.3E-13 94.6 17.1 173 55-231 299-486 (513)
213 TIGR00769 AAA ADP/ATP carrier 99.0 4.5E-07 9.8E-12 82.0 25.7 287 50-363 6-345 (472)
214 PRK10133 L-fucose transporter; 99.0 1E-08 2.2E-13 93.7 14.8 136 78-218 287-422 (438)
215 COG2223 NarK Nitrate/nitrite t 99.0 3E-09 6.5E-14 91.9 10.1 154 71-227 238-399 (417)
216 PRK11043 putative transporter; 99.0 3.3E-08 7.1E-13 89.6 17.3 130 73-205 225-359 (401)
217 TIGR00924 yjdL_sub1_fam amino 99.0 3E-08 6.4E-13 91.5 16.8 134 91-225 315-464 (475)
218 PRK15034 nitrate/nitrite trans 99.0 8.5E-09 1.9E-13 93.0 12.4 134 94-227 292-452 (462)
219 COG2807 CynX Cyanate permease 99.0 8.7E-08 1.9E-12 81.4 17.2 154 70-226 227-382 (395)
220 PRK09584 tppB putative tripept 98.9 8.6E-08 1.9E-12 89.0 17.1 131 91-222 319-472 (500)
221 KOG2532 Permease of the major 98.9 3.4E-08 7.5E-13 89.6 13.8 176 50-228 257-446 (466)
222 TIGR00885 fucP L-fucose:H+ sym 98.9 6E-08 1.3E-12 87.8 15.0 140 71-213 252-396 (410)
223 KOG3764 Vesicular amine transp 98.9 7.4E-09 1.6E-13 88.6 8.3 168 55-225 274-450 (464)
224 COG2211 MelB Na+/melibiose sym 98.9 1.1E-07 2.4E-12 84.9 15.5 122 80-201 264-394 (467)
225 PRK11652 emrD multidrug resist 98.8 2.2E-07 4.8E-12 83.9 16.4 126 77-205 234-362 (394)
226 KOG3762 Predicted transporter 98.8 1.1E-08 2.5E-13 90.8 7.5 167 57-226 377-544 (618)
227 TIGR00788 fbt folate/biopterin 98.8 8.3E-08 1.8E-12 88.3 12.6 150 79-230 281-447 (468)
228 KOG0252 Inorganic phosphate tr 98.8 8.2E-09 1.8E-13 90.0 5.2 177 51-231 304-500 (538)
229 KOG3098 Uncharacterized conser 98.8 1.8E-06 3.9E-11 77.2 20.0 107 94-201 56-162 (461)
230 PRK11462 putative transporter; 98.8 5.9E-07 1.3E-11 82.6 17.2 111 91-201 266-385 (460)
231 PF06779 DUF1228: Protein of u 98.7 9.9E-08 2.1E-12 63.6 6.9 81 63-145 4-84 (85)
232 PRK10207 dipeptide/tripeptide 98.7 7.8E-07 1.7E-11 82.3 15.3 110 91-200 312-438 (489)
233 PF05978 UNC-93: Ion channel r 98.7 8.7E-07 1.9E-11 67.5 12.6 107 93-200 42-148 (156)
234 TIGR00886 2A0108 nitrite extru 98.7 8.6E-08 1.9E-12 85.6 8.4 115 72-189 246-365 (366)
235 KOG0255 Synaptic vesicle trans 98.6 1.8E-06 3.9E-11 81.1 15.2 139 93-232 355-496 (521)
236 COG0738 FucP Fucose permease [ 98.6 1.2E-06 2.7E-11 75.7 12.1 157 50-212 235-392 (422)
237 PF03209 PUCC: PUCC protein; 98.5 9.2E-06 2E-10 70.9 16.5 146 78-225 236-394 (403)
238 PF06963 FPN1: Ferroportin1 (F 98.5 6.3E-05 1.4E-09 67.6 21.7 299 55-363 6-335 (432)
239 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00044 9.6E-09 63.3 25.7 285 47-357 20-355 (491)
240 PRK15403 multidrug efflux syst 98.4 2.5E-05 5.5E-10 71.0 17.0 143 72-219 239-387 (413)
241 TIGR01301 GPH_sucrose GPH fami 98.4 8.5E-06 1.8E-10 74.3 13.2 140 92-231 309-474 (477)
242 PF12832 MFS_1_like: MFS_1 lik 98.3 2.1E-06 4.5E-11 56.9 6.2 68 58-127 7-74 (77)
243 COG3202 ATP/ADP translocase [E 98.3 0.0022 4.7E-08 57.5 26.0 288 47-364 23-365 (509)
244 KOG3574 Acetyl-CoA transporter 98.3 0.00018 4E-09 61.9 18.1 151 47-202 27-194 (510)
245 PF06609 TRI12: Fungal trichot 98.2 1.9E-05 4.1E-10 73.5 12.8 147 51-197 310-461 (599)
246 KOG3810 Micronutrient transpor 98.2 1.3E-05 2.7E-10 67.9 9.4 261 79-351 34-301 (433)
247 KOG2533 Permease of the major 98.2 3.4E-05 7.3E-10 70.7 12.5 159 52-213 274-440 (495)
248 KOG2816 Predicted transporter 98.1 6.4E-05 1.4E-09 68.4 13.9 124 75-201 266-390 (463)
249 PTZ00207 hypothetical protein; 98.1 0.00013 2.9E-09 68.3 15.4 172 52-225 354-548 (591)
250 PRK15462 dipeptide/tripeptide 98.1 0.00018 4E-09 66.0 15.5 110 91-200 311-437 (493)
251 KOG2615 Permease of the major 98.0 8E-05 1.7E-09 64.2 11.2 124 79-204 290-415 (451)
252 PF00854 PTR2: POT family; In 98.0 0.00011 2.4E-09 65.8 11.8 108 119-227 2-121 (372)
253 KOG4332 Predicted sugar transp 98.0 0.00022 4.7E-09 58.5 12.1 98 70-170 56-154 (454)
254 PF02487 CLN3: CLN3 protein; 97.8 0.0004 8.6E-09 61.5 12.6 130 93-228 64-194 (402)
255 PF02487 CLN3: CLN3 protein; 97.8 0.00035 7.7E-09 61.8 11.3 107 91-201 284-395 (402)
256 KOG1237 H+/oligopeptide sympor 97.7 0.0011 2.5E-08 62.0 13.3 174 49-225 35-241 (571)
257 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00036 7.8E-09 46.2 6.8 65 295-360 10-74 (77)
258 COG3104 PTR2 Dipeptide/tripept 97.5 0.0088 1.9E-07 54.0 15.5 108 91-198 327-451 (498)
259 PRK03612 spermidine synthase; 97.3 0.033 7.2E-07 52.0 18.1 139 80-221 44-190 (521)
260 KOG3097 Predicted membrane pro 97.2 0.083 1.8E-06 45.1 17.9 99 97-196 67-180 (390)
261 KOG3098 Uncharacterized conser 97.1 0.039 8.4E-07 50.1 16.2 106 94-200 285-411 (461)
262 PF06963 FPN1: Ferroportin1 (F 97.1 0.013 2.9E-07 52.9 12.8 146 54-201 261-416 (432)
263 KOG1479 Nucleoside transporter 96.9 0.056 1.2E-06 47.9 14.8 93 140-233 116-208 (406)
264 PF13000 Acatn: Acetyl-coenzym 96.9 0.0077 1.7E-07 54.3 9.4 143 55-201 4-178 (544)
265 TIGR00939 2a57 Equilibrative N 96.9 0.022 4.7E-07 52.0 12.6 89 140-233 105-200 (437)
266 PF07672 MFS_Mycoplasma: Mycop 96.9 0.0057 1.2E-07 50.3 7.9 56 173-228 2-61 (267)
267 PF03092 BT1: BT1 family; Int 96.9 0.015 3.3E-07 53.2 11.4 147 83-231 252-415 (433)
268 TIGR00806 rfc RFC reduced fola 96.8 0.012 2.6E-07 53.4 9.6 68 310-377 50-118 (511)
269 KOG1330 Sugar transporter/spin 96.7 0.008 1.7E-07 53.6 8.0 90 289-378 33-125 (493)
270 KOG3762 Predicted transporter 96.5 0.0016 3.4E-08 59.0 2.5 98 280-378 366-463 (618)
271 TIGR00939 2a57 Equilibrative N 96.5 0.078 1.7E-06 48.4 12.9 107 91-198 310-429 (437)
272 KOG2563 Permease of the major 96.3 0.0062 1.3E-07 54.1 5.0 151 79-231 294-452 (480)
273 KOG2325 Predicted transporter/ 96.2 0.01 2.3E-07 53.9 5.8 76 144-220 390-466 (488)
274 PF06779 DUF1228: Protein of u 96.0 0.042 9E-07 36.9 6.5 61 318-378 24-84 (85)
275 PF03137 OATP: Organic Anion T 95.8 0.0025 5.5E-08 59.6 0.0 151 51-203 305-514 (539)
276 TIGR00880 2_A_01_02 Multidrug 95.8 0.14 3.1E-06 38.0 9.7 43 323-365 89-131 (141)
277 TIGR00805 oat sodium-independe 95.3 0.02 4.4E-07 55.0 4.4 59 313-371 60-118 (633)
278 PF05631 DUF791: Protein of un 95.3 0.086 1.9E-06 45.9 7.6 54 316-369 64-117 (354)
279 PF01770 Folate_carrier: Reduc 95.3 0.73 1.6E-05 41.4 13.5 94 91-184 288-383 (412)
280 PF01733 Nucleoside_tran: Nucl 95.0 0.0084 1.8E-07 52.1 0.6 108 92-199 186-306 (309)
281 PF06813 Nodulin-like: Nodulin 93.6 0.75 1.6E-05 38.4 9.3 68 303-371 16-86 (250)
282 KOG1479 Nucleoside transporter 93.5 0.95 2.1E-05 40.4 10.0 106 91-197 285-399 (406)
283 PF01733 Nucleoside_tran: Nucl 92.9 0.03 6.5E-07 48.7 0.0 20 325-344 186-205 (309)
284 KOG2881 Predicted membrane pro 92.4 5.5 0.00012 32.9 12.9 37 332-368 251-287 (294)
285 KOG0637 Sucrose transporter an 92.3 0.1 2.2E-06 46.8 2.5 127 92-218 336-485 (498)
286 KOG4332 Predicted sugar transp 88.1 12 0.00026 31.7 10.8 132 91-223 285-425 (454)
287 KOG3880 Predicted small molecu 88.1 2.9 6.3E-05 35.9 7.4 141 54-201 254-402 (409)
288 PF05978 UNC-93: Ion channel r 86.5 13 0.00028 28.6 10.4 48 325-372 41-88 (156)
289 PF13000 Acatn: Acetyl-coenzym 86.5 8.8 0.00019 35.5 10.0 46 145-190 409-454 (544)
290 TIGR00926 2A1704 Peptide:H+ sy 86.4 1.8 3.9E-05 41.9 6.2 69 302-370 4-73 (654)
291 PF06912 DUF1275: Protein of u 82.3 25 0.00054 28.5 15.4 38 168-205 153-190 (209)
292 COG5336 Uncharacterized protei 82.3 12 0.00025 26.3 6.9 40 331-370 52-92 (116)
293 PF07672 MFS_Mycoplasma: Mycop 81.3 11 0.00023 31.6 7.7 99 92-191 145-253 (267)
294 PF02990 EMP70: Endomembrane p 78.3 51 0.0011 31.2 12.3 24 327-350 303-326 (521)
295 KOG3810 Micronutrient transpor 78.0 23 0.0005 31.3 8.9 109 91-202 274-384 (433)
296 TIGR00769 AAA ADP/ATP carrier 77.0 64 0.0014 30.1 16.1 70 148-218 273-343 (472)
297 COG0477 ProP Permeases of the 76.8 9 0.0002 32.4 6.7 42 323-364 41-82 (338)
298 PF03219 TLC: TLC ATP/ADP tran 72.8 84 0.0018 29.5 14.1 66 148-214 289-355 (491)
299 PF02694 UPF0060: Uncharacteri 72.1 7.8 0.00017 27.1 3.8 49 321-369 54-102 (107)
300 PF11947 DUF3464: Protein of u 71.2 27 0.00059 26.6 6.9 51 139-192 95-145 (153)
301 COG5336 Uncharacterized protei 71.0 14 0.0003 26.0 4.8 27 94-120 48-75 (116)
302 PRK02237 hypothetical protein; 69.3 17 0.00037 25.6 5.0 48 322-369 57-104 (109)
303 KOG3880 Predicted small molecu 66.0 18 0.00039 31.3 5.5 129 92-228 66-198 (409)
304 KOG1237 H+/oligopeptide sympor 65.1 71 0.0015 30.7 10.0 80 295-374 47-127 (571)
305 TIGR02230 ATPase_gene1 F0F1-AT 62.5 51 0.0011 23.1 6.6 20 336-355 58-77 (100)
306 KOG3626 Organic anion transpor 61.9 20 0.00043 35.1 5.7 82 289-370 392-475 (735)
307 COG1288 Predicted membrane pro 60.1 1.4E+02 0.003 27.4 12.9 73 122-195 358-438 (481)
308 COG3619 Predicted membrane pro 56.1 1.1E+02 0.0025 25.1 16.4 119 87-205 54-196 (226)
309 PF11151 DUF2929: Protein of u 55.7 46 0.001 20.4 5.1 43 188-231 13-55 (57)
310 COG4769 Predicted membrane pro 55.7 21 0.00046 27.3 3.8 50 98-153 83-132 (181)
311 TIGR02230 ATPase_gene1 F0F1-AT 55.6 53 0.0012 23.0 5.5 36 183-218 49-87 (100)
312 COG4262 Predicted spermidine s 55.3 1.6E+02 0.0034 26.4 12.4 83 86-168 41-132 (508)
313 COG1268 BioY Uncharacterized c 52.7 58 0.0013 25.8 6.0 46 330-375 91-136 (184)
314 PF07857 DUF1632: CEO family ( 52.6 1.1E+02 0.0024 25.8 7.9 25 207-231 114-138 (254)
315 PRK10263 DNA translocase FtsK; 52.4 1.7E+02 0.0038 31.1 10.6 17 189-205 143-159 (1355)
316 PF02632 BioY: BioY family; I 48.0 78 0.0017 24.1 5.9 26 94-119 59-84 (148)
317 PF04346 EutH: Ethanolamine ut 47.0 2.1E+02 0.0045 25.4 13.1 55 103-157 61-118 (354)
318 TIGR01667 YCCS_YHJK integral m 45.4 3.2E+02 0.007 27.2 11.8 51 106-156 41-96 (701)
319 PF02694 UPF0060: Uncharacteri 43.5 73 0.0016 22.5 4.6 47 91-137 57-103 (107)
320 TIGR01666 YCCS hypothetical me 43.5 3.5E+02 0.0075 27.0 12.3 50 107-156 42-96 (704)
321 COG2233 UraA Xanthine/uracil p 42.9 2.8E+02 0.006 25.7 12.6 125 51-179 16-143 (451)
322 PF02535 Zip: ZIP Zinc transpo 41.2 2.4E+02 0.0052 24.4 14.2 35 140-174 259-294 (317)
323 COG1230 CzcD Co/Zn/Cd efflux s 40.9 2.4E+02 0.0052 24.4 10.4 81 48-136 22-105 (296)
324 PF02632 BioY: BioY family; I 40.5 1.5E+02 0.0033 22.5 6.5 20 332-351 64-83 (148)
325 PLN02332 membrane bound O-acyl 40.1 2.2E+02 0.0048 26.6 8.8 30 116-145 339-368 (465)
326 PRK14229 camphor resistance pr 39.3 1.4E+02 0.003 21.2 6.9 24 148-171 56-79 (108)
327 PF11299 DUF3100: Protein of u 39.3 23 0.00049 29.0 2.0 49 147-196 177-225 (241)
328 KOG1277 Endosomal membrane pro 38.1 3.1E+02 0.0068 25.3 8.8 23 323-345 325-347 (593)
329 PTZ00101 rhomboid-1 protease; 37.2 2.7E+02 0.0058 23.9 14.4 39 98-136 118-157 (278)
330 PRK02237 hypothetical protein; 37.1 1.3E+02 0.0028 21.4 5.1 47 91-137 59-105 (109)
331 COG1268 BioY Uncharacterized c 37.1 1E+02 0.0022 24.5 5.2 24 94-117 88-111 (184)
332 COG1742 Uncharacterized conser 36.3 50 0.0011 23.1 2.9 46 322-367 56-101 (109)
333 KOG2765 Predicted membrane pro 36.2 2.7E+02 0.0058 25.0 7.9 15 112-126 208-222 (416)
334 PRK03612 spermidine synthase; 35.9 3.9E+02 0.0085 25.4 18.9 33 320-352 144-177 (521)
335 PF06645 SPC12: Microsomal sig 34.1 90 0.0019 20.5 3.9 11 103-113 22-32 (76)
336 PF10785 NADH-u_ox-rdase: NADH 33.0 1.4E+02 0.003 20.3 4.7 39 102-140 32-77 (86)
337 PRK10692 hypothetical protein; 32.3 1.4E+02 0.0029 20.2 4.3 17 117-133 3-19 (92)
338 TIGR00844 c_cpa1 na(+)/h(+) an 31.5 5.7E+02 0.012 25.9 10.4 37 182-219 106-142 (810)
339 PF13937 DUF4212: Domain of un 30.5 1.2E+02 0.0027 20.2 4.1 20 100-119 58-77 (81)
340 PRK10263 DNA translocase FtsK; 30.0 4.7E+02 0.01 28.2 9.7 37 331-367 141-177 (1355)
341 COG2076 EmrE Membrane transpor 29.8 2.1E+02 0.0045 20.4 6.6 50 107-156 19-69 (106)
342 PF07456 Hpre_diP_synt_I: Hept 29.4 97 0.0021 23.6 3.8 51 95-151 68-118 (148)
343 PF11947 DUF3464: Protein of u 28.9 1.6E+02 0.0034 22.6 4.8 28 91-118 99-126 (153)
344 PF13940 Ldr_toxin: Toxin Ldr, 28.9 1E+02 0.0022 16.4 2.9 19 329-347 16-34 (35)
345 PRK14230 camphor resistance pr 27.8 2.4E+02 0.0052 20.5 6.8 24 148-171 60-83 (119)
346 KOG1397 Ca2+/H+ antiporter VCX 27.3 87 0.0019 28.0 3.7 39 50-88 289-327 (441)
347 KOG1278 Endosomal membrane pro 26.8 1.6E+02 0.0034 27.9 5.3 30 319-348 357-386 (628)
348 PF11833 DUF3353: Protein of u 26.7 3.4E+02 0.0073 21.8 8.4 31 172-202 136-166 (194)
349 PTZ00265 multidrug resistance 26.6 9.2E+02 0.02 26.8 18.8 12 207-218 197-208 (1466)
350 PF10762 DUF2583: Protein of u 25.7 1.8E+02 0.0039 19.5 4.0 17 117-133 3-19 (89)
351 PF08570 DUF1761: Protein of u 25.6 2.7E+02 0.0058 20.3 9.2 16 73-88 23-38 (126)
352 PF06341 DUF1056: Protein of u 24.9 1.9E+02 0.0041 18.2 4.4 36 140-176 27-62 (63)
353 KOG4050 Glutamate transporter 24.8 3.2E+02 0.007 21.0 7.6 41 332-372 84-128 (188)
354 PF00854 PTR2: POT family; In 24.8 2.4E+02 0.0051 25.2 6.3 49 92-140 76-124 (372)
355 TIGR00986 3a0801s05tom22 mitoc 24.5 2.7E+02 0.0058 21.0 5.2 26 164-189 56-81 (145)
356 KOG2399 K+-dependent Na+:Ca2+ 24.2 6.8E+02 0.015 24.4 12.9 64 65-132 461-524 (605)
357 KOG3574 Acetyl-CoA transporter 23.9 4.8E+02 0.01 24.0 7.5 59 147-205 375-433 (510)
358 PF04550 Phage_holin_2: Phage 23.2 2.5E+02 0.0054 19.1 4.4 34 138-171 28-61 (89)
359 COG3202 ATP/ADP translocase [E 22.6 6.6E+02 0.014 23.8 13.4 74 147-221 290-365 (509)
360 PF12273 RCR: Chitin synthesis 22.5 47 0.001 24.5 1.1 14 208-221 1-14 (130)
361 KOG4830 Predicted sugar transp 22.2 48 0.001 28.0 1.2 81 37-119 3-92 (412)
362 KOG0065 Pleiotropic drug resis 21.8 8.6E+02 0.019 26.4 9.8 85 122-216 549-639 (1391)
363 PF14715 FixP_N: N-terminal do 21.2 1.7E+02 0.0038 17.5 3.1 21 205-225 22-42 (51)
364 KOG4050 Glutamate transporter 21.1 3.9E+02 0.0085 20.6 6.6 17 98-114 83-99 (188)
365 KOG3500 Vacuolar H+-ATPase V0 20.6 2E+02 0.0044 19.1 3.5 42 330-371 10-51 (84)
366 PRK14200 camphor resistance pr 20.4 3.6E+02 0.0078 19.9 7.8 24 148-171 69-92 (127)
367 TIGR00827 EIIC-GAT PTS system, 20.3 6.7E+02 0.015 23.0 8.6 35 61-95 44-78 (407)
368 PF04024 PspC: PspC domain; I 20.3 1.9E+02 0.0042 18.0 3.4 26 207-232 31-60 (61)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.1e-34 Score=272.87 Aligned_cols=206 Identities=20% Similarity=0.269 Sum_probs=184.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
+..|..++++.++.+..+++...++..+|.+.++++++..+. +++.+++.++.+++++++|+++||+|||++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~--g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK--GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 456777778888888888988889999999999999987666 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc---
Q 016986 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--- 203 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--- 203 (379)
+.+++.++++++++++.++++|++.|++.|+..+....+++|++|+++|++.+++...+..+|.++++.++..+...
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998766544322
Q ss_pred ----------chhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCC
Q 016986 204 ----------AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGS 255 (379)
Q Consensus 204 ----------~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~ 255 (379)
.+ ||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++...+
T Consensus 321 ~~~~g~~~~~~g-WR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 321 SFQMGSAYQFHS-WRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred hhcccccccccc-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 24 9999999888888887778889999999999999999998888876554
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-34 Score=247.64 Aligned_cols=288 Identities=21% Similarity=0.248 Sum_probs=252.0
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
.+..++.+.++.|..+....+....+|++.+|+|+|.... |+..|+|.++..++.|+...+.||+.||++++..+.++
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a--G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA--GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 3566777888888888888899999999999999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
.++++++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|..+|.++.+..| ||
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-WR 167 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-WR 167 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
+.|+..+..+++..+.. ..+| |+ +. +++...+..+..+.+|+|..
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~-----~~---------------------------~~~~~~~~~~~~~~l~~p~v 213 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PS-----EI---------------------------SGSLPGPLRTLLRLLRRPGV 213 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--Cc-----cC---------------------------CCCCCcchhHHHHHhcCchH
Confidence 99999888887776654 4577 11 00 00111122345567899999
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSI 367 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~ 367 (379)
+..++..++.....+..++++..++.+..+.+....++....++++.++|+.++|++.|| +.|+.+.....+..+..+.
T Consensus 214 ~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 214 LLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA 292 (394)
T ss_pred HHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH
Confidence 999999999999989988888888888877777778899999999999999999999999 8888888887777777777
Q ss_pred HHHHHHh
Q 016986 368 SLILEAF 374 (379)
Q Consensus 368 ~~~~~~~ 374 (379)
+.+..+.
T Consensus 293 l~~~~~~ 299 (394)
T COG2814 293 LTFTGAS 299 (394)
T ss_pred HHHhcch
Confidence 6665544
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=244.82 Aligned_cols=307 Identities=15% Similarity=0.095 Sum_probs=250.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
+.+++.++.+++++...++.+..++...|.+.+|.++|.++. |++.+.+.++|.++.++.|.++||.++|..+..+++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l--G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL--GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 445788888999999999999999999999999999988887 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc--ccccccc
Q 016986 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG--IPVKEIA 204 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~ 204 (379)
+.++.+++++++++.+.+.+.-+++|..+|...|.+...++.|++++|||+..++++++.++|..+.|++. +.+..+.
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888 7777777
Q ss_pred hhhHHHHHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcC-CCCCcchhhhhh
Q 016986 205 GWWRICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRG-DDGDIVKFEELL 282 (379)
Q Consensus 205 ~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 282 (379)
+ ||..|++.++++++..+. ++..+|+|+..-. +..++..++ .... . .++.+.+ -.....-.+-++
T Consensus 183 ~-w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL-P~ie~~~~d-------~~e~---~-~~~~~~~~ls~~~i~~~YVL 249 (448)
T COG2271 183 G-WRAAFYFPGIIAIIVALILLFLLRDRPQSEGL-PPIEEYRGD-------PLEI---Y-EEEKENEGLTAWQIFVKYVL 249 (448)
T ss_pred c-hhHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CCHHHhhcC-------chhh---h-hhhccCCCccHHHHHHHHHH
Confidence 7 999999988887776555 4557888752110 111111100 0000 0 0000000 111122345678
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhh--CchHHHHHH-HH
Q 016986 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL--GRKALLQWS-FF 359 (379)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~-~~ 359 (379)
+||..|.+.+..++....-+....|.|.|+.+..+.+..+++.....+-.++++|.+++|+++||+ |||.+..+. ++
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 999999999999999999999999999999999898888899999999999999999999999996 677665544 33
Q ss_pred HHHHHHHHH
Q 016986 360 SMVICSSIS 368 (379)
Q Consensus 360 ~~~i~~~~~ 368 (379)
+..++....
T Consensus 330 ~i~~~~~~~ 338 (448)
T COG2271 330 LITASLVLY 338 (448)
T ss_pred HHHHHHHHH
Confidence 434433333
No 4
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1e-32 Score=254.84 Aligned_cols=317 Identities=12% Similarity=0.027 Sum_probs=245.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
++|..+..++++.++..++.+.++..+|.+.+|+|.+.++. +|+.++|.++..++.+++|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34678888999999999999999999999999999988777 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhc-CCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh
Q 016986 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (379)
+.++++++++++|++.++++|+++|+|.+...+.....+.+.+ |+++|+++++++.....+|..+||.+++.+.++.+
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 9999999999999999999999999999999988888887776 67999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHH------------HHHHhCCCchh-HH----------HH
Q 016986 207 WRICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAE------------FEKLLGGSHVK-SS----------LA 262 (379)
Q Consensus 207 wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~----------~~ 262 (379)
|||.|++.....++.+++ .+++||+++.. +++.+..... .+......... .. ..
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG 237 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 999999977666665444 45567764311 1111110000 00000000000 00 00
Q ss_pred HHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 016986 263 ELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAM 342 (379)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 342 (379)
.....+.. ...+.-..+++++|.+....+..++.....+....+.+.|++..++.+..++|....+..++..++.++.|
T Consensus 238 ~f~~~e~~-~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g 316 (495)
T PRK14995 238 LFIRTQLA-ASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAG 316 (495)
T ss_pred HHHHHHhc-CCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111 12222235688999888777777666666666666778888888888888889999999999999999999
Q ss_pred HHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 343 VLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 343 ~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
++.||+|+|+.+..+..+..++..++..
T Consensus 317 ~l~~r~g~~~~~~~g~~~~~~~~~~l~~ 344 (495)
T PRK14995 317 ILVSRLGLRLVATGGMALSALSFYGLAM 344 (495)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888777776655543
No 5
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.6e-32 Score=251.98 Aligned_cols=290 Identities=17% Similarity=0.204 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhH--HHH--HHHHHHHHHHHHHHhHHhhhccchhHHHHHHHh
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLA--EGL--VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~--~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 125 (379)
++.+....+++++++++...++...|.+.++++.+.++.. .+. +.++.+++..++++++|+++||+|||+++..++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3466677889999999999999999999999976543321 111 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchHH--------HHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc
Q 016986 126 LPMIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (379)
++++++++++++++|+++ ++++|+++|++.|..++...++++|++|+++|+++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 788999999999999999999999999999999999999988888888877655
Q ss_pred cccc--------ccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhc
Q 016986 198 IPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDR 269 (379)
Q Consensus 198 ~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (379)
..+. ...| ||+.|++.+++.++.+++...+||+|++...+++.++..+ +.
T Consensus 175 ~~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------------~~ 232 (490)
T PRK10642 175 VLISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------------EG 232 (490)
T ss_pred HHHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------------cc
Confidence 4332 2456 9999999877666555555678999876433221111000 00
Q ss_pred CCCCCcchhhhhhcccchhHHHHH---HHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 016986 270 GDDGDIVKFEELLYGRHFRVVFIG---STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD 346 (379)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 346 (379)
..+.+..++++++++ +.+..... .++....++....+.|.|+...++.+....+.......++.+++.++.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 311 (490)
T PRK10642 233 LQDGPKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD 311 (490)
T ss_pred ccccccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001112345566653 22222211 12222333444455666655444433333455666777888899999999999
Q ss_pred hhCchHHHHHHHHHHH
Q 016986 347 KLGRKALLQWSFFSMV 362 (379)
Q Consensus 347 ~~g~~~~~~~~~~~~~ 362 (379)
|+|||+.+..+.+.+.
T Consensus 312 r~grr~~~~~~~~~~~ 327 (490)
T PRK10642 312 RFGRRPFVILGSVALF 327 (490)
T ss_pred HhccHHHHHHHHHHHH
Confidence 9999998877665433
No 6
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-31 Score=235.65 Aligned_cols=323 Identities=33% Similarity=0.564 Sum_probs=262.0
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhh--------hhcc--CCcc--hhHHHHHHHHHHHHHHHHHHhHHhhhccchh
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESIS--------LDLG--FNGN--TLAEGLVVSMCLGGAFIGSTLSGWIADGVGR 117 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~--~~~~--~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr 117 (379)
......+.++.+-.++....+++..+.+. +.+| ++++ +..++.+.+++.+|.++|+++.|+++||+||
T Consensus 10 ~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GR 89 (485)
T KOG0569|consen 10 LLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGR 89 (485)
T ss_pred HHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33444455555777888888888765443 3445 2322 2335889999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhc---ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 016986 118 RRAFQLCALPMIIGASISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (379)
Q Consensus 118 r~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 194 (379)
|..++++.++..++.++..+ .+++++++++|++.|+..|........|+.|..|.+.||....+.+.+..+|.+++.
T Consensus 90 K~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 90 KNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 99999998888888777655 478999999999999999999999999999999999999999999999999999997
Q ss_pred hhcc-cccccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHH-cCChHHHHHHHHHHhCCCchhHHHHHHHh---hhc
Q 016986 195 LIGI-PVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYK-KGRTAEAEAEFEKLLGGSHVKSSLAELSK---LDR 269 (379)
Q Consensus 195 ~~~~-~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 269 (379)
.++. .+......|++.+.+..+++++.++...++||+|+|+.. +++.+++++.++..++..+.+.+.++..+ .++
T Consensus 170 ~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~ 249 (485)
T KOG0569|consen 170 VLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEE 249 (485)
T ss_pred HHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhc
Confidence 7654 233233339999999999999999999999999999988 78899999999999998876555444332 222
Q ss_pred CCCCCcchhhhhhcccchhH-HHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChh---HHHHHHHHHHHHHHHHHHHHH
Q 016986 270 GDDGDIVKFEELLYGRHFRV-VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLM 345 (379)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~ 345 (379)
.++.+..+++++++++..+. ..+...+.....+.+.+...+|...++...+.+.. +.....++..++..+++.++.
T Consensus 250 ~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~li 329 (485)
T KOG0569|consen 250 LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLI 329 (485)
T ss_pred cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33346778999999987665 45566667777788888899999999988877643 788888999999999999999
Q ss_pred HhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 346 DKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 346 d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
||.|||++++.++.++.+..+++....
T Consensus 330 d~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 330 DRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888776653
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.8e-32 Score=245.28 Aligned_cols=277 Identities=17% Similarity=0.196 Sum_probs=214.5
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
+|..+..+.++.+..........+.+|.+.+++|.+.++. +++.+++.+++.+++++.|+++||+|||+++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV--GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3444555555555544444455677899999999988777 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
+++++++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+.+..+ ||
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 163 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WR 163 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888878 99
Q ss_pred HHHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
+.|++.++..++..+.. .++||+|+ ++. + ...+.++.++++.+
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~-----~~~-~------------------------------~~~~~~~~~~~~~~ 207 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPS-----EHS-G------------------------------SLKSLPLLFRRPAL 207 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC-----CCc-c------------------------------hHHHHHHHHhCcHH
Confidence 99999877766654443 34565431 000 0 01124567788887
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICS 365 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~ 365 (379)
+......++.....+....+.+.|..+..+.+....+......+++.++++++.+++.||+++|... .+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHH
Confidence 7655555444444444445555555554555555677788888899999999999999999987654 3443333433
No 8
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=4.4e-32 Score=251.35 Aligned_cols=322 Identities=17% Similarity=0.206 Sum_probs=223.0
Q ss_pred cchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhc-c--CCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHH
Q 016986 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL-G--FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ 122 (379)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~ 122 (379)
.+..++.+.++.++.+.++++...++...|.+.+++ + ...+....+++.+.+.++..++++++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 345567778888899999999999999999887753 1 1122333489999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcccc------hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhh
Q 016986 123 LCALPMIIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (379)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (379)
.++++..++.++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++.+....+|.++++.+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888876 78899999999999999999999999999999999999999999999999888887
Q ss_pred cccccc-----------------------cchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChH-HHHHHHHHHh
Q 016986 197 GIPVKE-----------------------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTA-EAEAEFEKLL 252 (379)
Q Consensus 197 ~~~l~~-----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~-~~~~~~~~~~ 252 (379)
+..+.. ..+ ||+.|.+.+++.++..+..+++||+|+|+..+++.+ ++.+...+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhccc-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 654321 124 999999888888887777888999999998877764 3454444443
Q ss_pred CCCchhHHHHHHHhhhcCCCCCcchhhhhhccc---chhHHHHH-HHH---HHHHHhhchhHHHHhHHHHHHHcCCChh-
Q 016986 253 GGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR---HFRVVFIG-STL---FALQQLSGINAIFYFSSSVFKSAGLSSG- 324 (379)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (379)
..+... +.++.++.++.++....+++++++++ +.+...+. ... .....+....+.|.++.. .+......+
T Consensus 250 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~ 327 (502)
T TIGR00887 250 QVKIEA-EPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATN 327 (502)
T ss_pred cccccc-CcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccch
Confidence 221110 00111111111111123577777532 22122221 111 111222222233333322 222211111
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 325 -----------LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 325 -----------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
.......++.+++.+++++++||+|||+++.++..++.+++.++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 328 NAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 0233445567778899999999999999988887776666555543
No 9
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.7e-31 Score=245.70 Aligned_cols=316 Identities=29% Similarity=0.500 Sum_probs=226.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhc--------cCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL--------GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~ 119 (379)
...+..+++.++.+.++++...+++..|.+++++ +.+..+. +++.+++.++..++++++|+++||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLL--GFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3466777778889999999999999999998888 5555554 89999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcc------------cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHH
Q 016986 120 AFQLCALPMIIGASISATT------------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC 187 (379)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 187 (379)
+++.+.+++.++.++++++ +++..++++|+++|++.|...+...++++|++|+++|++++++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999999988887763 2356788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccc--------ccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhH
Q 016986 188 LGLMGSLLIGIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKS 259 (379)
Q Consensus 188 ~g~~~~~~~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (379)
+|.++++.+++.+. +..+ ||+.|++.++..++..+..+++||+|+++..+++.++..+..++.........
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 245 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQ 245 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHH
Confidence 99998887765442 3345 99999998888777766677899999988777776666555554433322221
Q ss_pred HHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCC---hhHHHHHHHHHHHH
Q 016986 260 SLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLL 336 (379)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 336 (379)
..++..+....+.. ..+..+. ..............+..........+|.+...+..+.+ ........++..++
T Consensus 246 ~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 246 ALQEIKHSLDHGRK---TGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred HHHHHHHHHHHhhh---hhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHH
Confidence 11111111000000 0011111 00111111111112222222333445555555544432 34566677888999
Q ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 337 GSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 337 ~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
+.+++++++||+|||+.+..+.+++.++.+++..
T Consensus 322 ~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~ 355 (479)
T PRK10077 322 FTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT 355 (479)
T ss_pred HHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999999888888887766544
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.7e-32 Score=247.57 Aligned_cols=298 Identities=15% Similarity=0.128 Sum_probs=219.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
.+|+.+..+++..++++++...++...|.+.+|+|++.++. +++.+++.+++++++++.|+++||+|||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF--GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 45778888888889999999999999999999999987777 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc-----
Q 016986 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE----- 202 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 202 (379)
++++++++++++|++++++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887753
Q ss_pred -cchhhHHHHHHHHHHHHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHH-hhhcCCCCCcchhh
Q 016986 203 -IAGWWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELS-KLDRGDDGDIVKFE 279 (379)
Q Consensus 203 -~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 279 (379)
..+ ||+.|++.++..++..+ ..+++||+|+.. +.-.++.++...+........ .++.+ ..++........++
T Consensus 163 ~~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (412)
T TIGR02332 163 ALKG-WQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQLT--LEQPEGAFAHAAMPQRSMLR 237 (412)
T ss_pred Cccc-hhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhcccc--ccccccccccccccHHHHHH
Confidence 245 99999998777665544 446678887421 000011111111100000000 00000 00000000012234
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH-HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHH
Q 016986 280 ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV-FKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKAL 353 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 353 (379)
+++ ++.++...+..++.....+....+.|.|+.+. .+.+..+.+.......++.+++.++.|+++||+++|+.
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 238 EIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred Hhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 444 46666655555555555555566666666542 12233456677888999999999999999999987764
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=7.2e-32 Score=245.47 Aligned_cols=280 Identities=18% Similarity=0.109 Sum_probs=203.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccC---Ccchh-HHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGF---NGNTL-AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~-~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~ 123 (379)
+++..+...+++.+++.++...++...|.+.++++. +..+. +.+.+.++.+++..++++++|+++||+|||+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 345567777788999999999999999999999863 32222 11223344445555999999999999999999999
Q ss_pred HhHHHHHHHHHHhcccchH--------HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHh
Q 016986 124 CALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (379)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 195 (379)
+.++++++++++++++++. .++++|+++|++.|..++...++++|++|+++|+++.++.+.+...|.++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 58889999999999999999999999999999999999999888888888877
Q ss_pred hccccc--------ccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhh
Q 016986 196 IGIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKL 267 (379)
Q Consensus 196 ~~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (379)
+...+. ...| ||+.|++.+++.++........||+|++.. + +
T Consensus 179 ~~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------~--~--------------------- 228 (432)
T PRK10406 179 VVVVLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETSQQET------R--A--------------------- 228 (432)
T ss_pred HHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCchHHH------h--h---------------------
Confidence 654443 1346 999999988877766555555677653210 0 0
Q ss_pred hcCCCCCcchhhhhhcccchhHHHHHHHHH-HHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 016986 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLF-ALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD 346 (379)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 346 (379)
.. +..+++++++++..+...+...+. ....+....+.|.|+.+.++.+..+.+.......++..++.++.|+++|
T Consensus 229 -~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~D 304 (432)
T PRK10406 229 -LK---EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSD 304 (432)
T ss_pred -hc---ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 012466777777766554443332 3334444555666655444433334456666667777888889999999
Q ss_pred hhCchHHHHHHHHHH
Q 016986 347 KLGRKALLQWSFFSM 361 (379)
Q Consensus 347 ~~g~~~~~~~~~~~~ 361 (379)
|++||+.+.++.++.
T Consensus 305 r~grr~~~~~~~~~~ 319 (432)
T PRK10406 305 KIGRRTSMLCFGSLA 319 (432)
T ss_pred HcCchHHHHHHHHHH
Confidence 999998776655443
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.6e-31 Score=243.70 Aligned_cols=322 Identities=31% Similarity=0.578 Sum_probs=229.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCC------cchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFN------GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA 120 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~ 120 (379)
++.+...+++.++.++..++...+++..|.+..+++.+ .+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 33445555666677778888888899999999998887 334445999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcc---cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc
Q 016986 121 FQLCALPMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (379)
Q Consensus 121 l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (379)
++.+.++..++.+++.+. .+++.+++.|+++|++.+...+....+++|++|+++|++++++++.+..+|..+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999888554 44568999999999999999999999999999999999999999999999999999998
Q ss_pred ---ccccccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHH----HHh-hhc
Q 016986 198 ---IPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE----LSK-LDR 269 (379)
Q Consensus 198 ---~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~ 269 (379)
....+..+ ||+.|++.++..++.++..+++||+|++...+++.++..+...+............+ ... ...
T Consensus 184 ~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 184 SGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 66666667 999999977777776667778999998776666655544444333222211111000 000 000
Q ss_pred CCCCCcchhhhhhcccc--hhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCC---hhHHHHHHHHHHHHHHHHHHHH
Q 016986 270 GDDGDIVKFEELLYGRH--FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVL 344 (379)
Q Consensus 270 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l 344 (379)
........++++++..+ .+..+....+..+..........++.+...+..+.+ .+.......++.+++.++.|++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 342 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFL 342 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111334443221 233333333333333333333444444444444433 4677778888999999999999
Q ss_pred HHhhCchHHHHHHHHHHHHHHHHHH
Q 016986 345 MDKLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 345 ~d~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
+||++||+.+..+.++..++.+++.
T Consensus 343 ~d~~~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 343 VDRFGRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999998888777777666655
No 13
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.8e-31 Score=245.09 Aligned_cols=325 Identities=34% Similarity=0.608 Sum_probs=261.1
Q ss_pred hHHHHHHHHHHHHHHhhh--hccccchhhhhhhhccCCc---ch--hHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHH
Q 016986 49 SFPHVLVATLSSFLFGYH--LGVVNEPLESISLDLGFNG---NT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF 121 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~---~~--~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l 121 (379)
.........+..+..+++ .+..++....+.++...+. ++ .+.+|+.+++.++..+++++.|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 344555556666666665 5566677777766433221 11 2348999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 122 QLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
+++.+.+.++.+++++++|+.+++++|+++|+|.|....+.+.+++|..|++.||...+..+....+|..++..++....
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999977766665
Q ss_pred cc-chhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhC--CCchhHHHHHHHhh--hcCC-CCCc
Q 016986 202 EI-AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLG--GSHVKSSLAELSKL--DRGD-DGDI 275 (379)
Q Consensus 202 ~~-~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~-~~~~ 275 (379)
+. .+ ||..+.+..+++++..+..++.||+|+|+.++++.+++++.+..+.+ ..+...+.++.... .+.. ....
T Consensus 203 ~~~~~-Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (513)
T KOG0254|consen 203 KVYAG-WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGK 281 (513)
T ss_pred cCCcc-HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccc
Confidence 44 35 99999999999988888888899999999999999999999999988 33444443333311 1111 1112
Q ss_pred chhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCh--hHHHHHHHHHHHHHHHHHHHHHHhhCchHH
Q 016986 276 VKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS--GLANVFVGIANLLGSVVAMVLMDKLGRKAL 353 (379)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 353 (379)
..++++++.+..+...+...+..+..+++.+...+|.+.+++..+.+. .......++..+++..++.++.||+|||++
T Consensus 282 ~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l 361 (513)
T KOG0254|consen 282 ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKL 361 (513)
T ss_pred ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 246666665566667778888888888888888899999988877764 456677788888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 016986 354 LQWSFFSMVICSSISLILEAF 374 (379)
Q Consensus 354 ~~~~~~~~~i~~~~~~~~~~~ 374 (379)
++.+...+.++.+++......
T Consensus 362 ll~s~~~m~~~~~~~~~~~~~ 382 (513)
T KOG0254|consen 362 LLFGAAGMSICLVILAVVGVF 382 (513)
T ss_pred HHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999888776544
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.3e-31 Score=240.03 Aligned_cols=297 Identities=17% Similarity=0.209 Sum_probs=221.5
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
+.+++.+..+.+..+.++++.....+..|.+.+++|.++.+. +++.+++.++..++++++|+++||+|||++++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG--AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 344566778888888889999888999999999999987776 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh
Q 016986 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (379)
..+++.++++++++++.++++|+++|++.+...+....++.|++|+|+|+++.++...+..+|.++++.+.+.+.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~- 170 (426)
T PRK12307 92 AYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG- 170 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccc
Q 016986 207 WRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (379)
Q Consensus 207 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (379)
||+.|++..+..++........||++++..++.+ + ..+ ..+...+....+++++++++.
T Consensus 171 w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~--~----------~~~---------~~~~~~~~~~~~~~~~~~~~~ 229 (426)
T PRK12307 171 WRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS--G----------KGK---------HSQSAWSVFSLSMKGLFNRAQ 229 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh--c----------ccc---------ccccchhhhhHHHHHHHhhch
Confidence 9999988654443333222334555432111000 0 000 000000111235677888887
Q ss_pred hhHHHHHHHHHHHHH---hhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 016986 287 FRVVFIGSTLFALQQ---LSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVI 363 (379)
Q Consensus 287 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i 363 (379)
++............. +....+.+.|+.. .+.+....+.......++.+++.++.|++.||++||+.+..+.++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 308 (426)
T PRK12307 230 FPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 765443332222211 1223344555443 233233345677778889999999999999999999988877766665
Q ss_pred HHHHH
Q 016986 364 CSSIS 368 (379)
Q Consensus 364 ~~~~~ 368 (379)
..+.+
T Consensus 309 ~~~~~ 313 (426)
T PRK12307 309 FIFPL 313 (426)
T ss_pred HHHHH
Confidence 55444
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.9e-31 Score=237.48 Aligned_cols=302 Identities=19% Similarity=0.217 Sum_probs=219.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
+++|+.+..++++.+.++++....++..|.+.+++|.+..+. +++.+++.++..+++++.|+++||+|||++++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA--ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 455788888999999999999999999999999999988777 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch-
Q 016986 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG- 205 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~- 205 (379)
+.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888776543
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhccc
Q 016986 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (379)
+||+.|++.++..++.++.....||++++..++++.++..+..++......... ...+......++. .+
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~--~~ 234 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIA---------NIVMTLAAAMVQS--AG 234 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhh---------hhhhhhhHHhhhh--hh
Confidence 399999987766666655566678876543222211111111111110000000 0000000001111 11
Q ss_pred chhH----HHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 016986 286 HFRV----VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (379)
Q Consensus 286 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 361 (379)
..+. .................+.+.|..+.++.+..+.+.......++.+++.++.+++.||++||+.+..+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~ 314 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAG 314 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHH
Confidence 1111 111111112222233344555555544544445667788889999999999999999999999887776654
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.6e-30 Score=233.43 Aligned_cols=267 Identities=16% Similarity=0.136 Sum_probs=205.4
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
.|+.+..+.+..+..........+.+|.+.+++|.+.++. ++..+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVA--GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 4555555555555554444455667899999999988877 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
+++.+++++++|++.+++.|+++|++.+...+...+++.|++|+|+|+++.++...+.++|..++|.+++.+.+..+ ||
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 174 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WR 174 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888 99
Q ss_pred HHHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
+.|++.++..++..+.. ...||+|+ ++ ++ ...+.++.+++|.+
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~~-----~~-~~------------------------------~~~~~~~~l~~~~~ 218 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLPG-----EP-SH------------------------------QKQNTFRLLQRPGV 218 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCc-----cc-cc------------------------------chhHHHHHhcCHHH
Confidence 99998776665544433 33565431 00 00 01123456777877
Q ss_pred hHHHHHHHHHHHHHhhchhHH-HHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAI-FYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQ 355 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 355 (379)
+...+..++.....+....+. |.|. +.++.+..+.+......+++.+++.++.+++.||.+++..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~ 286 (394)
T PRK10213 219 MAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAG 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 776555444444443333443 3333 333444445678888888999999999999999965443333
No 17
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.4e-31 Score=247.36 Aligned_cols=291 Identities=22% Similarity=0.313 Sum_probs=225.5
Q ss_pred chhhhhhhhccCC---cchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHH
Q 016986 72 EPLESISLDLGFN---GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (379)
Q Consensus 72 ~~~~~i~~~~~~~---~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 148 (379)
+..|.+.+|+|++ ..+. +++.+++.++..++++++|+++||+|||++++++.++.+++.++.++++|++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~--~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKV--DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHH--HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 5678899999997 4444 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 149 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999998876543 9999999888887777777889
Q ss_pred CCChhHHHHcCChHHHHHHHHHHhCCCchh--HHHHHHH-hhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhch
Q 016986 229 AESPHWLYKKGRTAEAEAEFEKLLGGSHVK--SSLAELS-KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 305 (379)
Q Consensus 229 ~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (379)
||+|+|+..+++.+++.+..++....+... .+..+.. +.+..+..+...++++++++.++...+...+..+.....+
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888777666544322111 1110110 1111111223567889999988876665544443332222
Q ss_pred hHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 306 NAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
...+.+.+ ..+.+........++..+++.++.+++.||+|||+.+.++.++.+++++++.+.+
T Consensus 344 ~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~ 406 (505)
T TIGR00898 344 YGLVLDLG----NLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP 406 (505)
T ss_pred HHHhcccc----ccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 22222222 2233344566677888899999999999999999999988888888777666543
No 18
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=4.8e-32 Score=248.96 Aligned_cols=299 Identities=16% Similarity=0.095 Sum_probs=222.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
..+..+..+++.+++.+.++..+++..|.+.+|+|++..+. |++.+++.+++.+++++.|+++||+|||+++..+.++
T Consensus 26 ~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 26 PFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL--GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 35666777888888888899999999999999999987777 9999999999999999999999999999999988888
Q ss_pred HHHHHHHHhc-----ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc
Q 016986 128 MIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (379)
Q Consensus 128 ~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (379)
++++.+..++ ++|++.+++.|+++|++.+...+...++++||+|+++|++++++++.+..+|.++++.+...+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 104 SAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 8877766554 68999999999999999999999999999999999999999999999999999999888766554
Q ss_pred cc--hhhHHHHHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcch-h
Q 016986 203 IA--GWWRICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVK-F 278 (379)
Q Consensus 203 ~~--~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 278 (379)
.. ++||..|.+.+++.++..+. +++.+++|+.. +..++ ++..+ . . ...+ + ...++.+...... .
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~~~---~-~-~~~~--~-~~~~~~~~~~~~~~~ 251 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEIFG---E-P-ISEE--D-KETESTDMTKWQIFV 251 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhccc---C-c-cchh--h-hccccccCcHHHHHH
Confidence 32 23899888877666655444 34456665421 11010 00000 0 0 0000 0 0000000000111 2
Q ss_pred hhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHH
Q 016986 279 EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSF 358 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 358 (379)
+..++++.++...+..++..........+.|.|+.+.++.+..+++.......++.+++.++.|+++||+++|+......
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 252 EYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACI 331 (467)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH
Confidence 33688888888877777766666666677888887766666666777888888999999999999999999887765544
Q ss_pred HH
Q 016986 359 FS 360 (379)
Q Consensus 359 ~~ 360 (379)
..
T Consensus 332 ~~ 333 (467)
T PRK09556 332 AL 333 (467)
T ss_pred HH
Confidence 33
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.4e-30 Score=234.29 Aligned_cols=292 Identities=18% Similarity=0.232 Sum_probs=221.8
Q ss_pred cchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHh
Q 016986 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (379)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 125 (379)
.+++|..+.++++..++++++....+...|.+.+++|.+.++. +++.+++.++..+++++.|+++||+|||+++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM--GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3466888888889999999999999999999999999987776 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
++..++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 88 ALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888777
Q ss_pred hhHHHHHHHHHHHHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcc
Q 016986 206 WWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG 284 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (379)
||+.|++.++..++..+ ...++||+|++..++++.++.++ ..+..+++
T Consensus 168 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~ 216 (406)
T PRK11551 168 -WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP------------------------------VLRALFGE 216 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh------------------------------hHHHHhhh
Confidence 99999987665555443 34557888654322111110000 00111111
Q ss_pred ---cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 016986 285 ---RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (379)
Q Consensus 285 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 361 (379)
+..+......+......+....+.|.+..+ .+.+..+.+.......++.+++.++.|++.||+++|+.+..+.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 295 (406)
T PRK11551 217 GRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGI 295 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 112222222222222333333445555443 2444445678888889999999999999999999999887766666
Q ss_pred HHHHHHHHHH
Q 016986 362 VICSSISLIL 371 (379)
Q Consensus 362 ~i~~~~~~~~ 371 (379)
.++.+++...
T Consensus 296 ~~~~~~~~~~ 305 (406)
T PRK11551 296 LASLAALAAA 305 (406)
T ss_pred HHHHHHHHhc
Confidence 5555544433
No 20
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=2.6e-30 Score=232.17 Aligned_cols=279 Identities=13% Similarity=0.061 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
|.....++.+.+..... ...++.+|.+++|+|++.++. +++.+++.+++.+++++.|+++||+|||+++..+..+++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVA--ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 44444444443333333 567899999999999988777 999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHH
Q 016986 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (379)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~ 209 (379)
++.+++++++|++.++++|+++|++.+...+....++.|++| ++|+++++++..+..+|..+++.+++.+.++..+||+
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 999999999999999999999999999999999999999997 7899999999999999999999999888877533999
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchh
Q 016986 210 CFWVSIVPAAILCLAMVFC-AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (379)
Q Consensus 210 ~f~~~~~~~~~~~~~~~~~-~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (379)
.+.+.++..++..+..+.. +++|+ + ++ ++ ..+.++.++++..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~--------------------------~~---~~~~~~~l~~~~~~ 208 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVA-----S--SH--------------------------KT---TTTPVRVVFTPRAW 208 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc-----c--cc--------------------------CC---CcCCcccccCHhHH
Confidence 8876555544433333222 12111 0 00 00 01123445566666
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q 016986 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSIS 368 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~ 368 (379)
...+...+....+.....+.+.|+.+ ++.+..+.+......+++.++++++.+++.||+++|+.+..+..+..++.+++
T Consensus 209 ~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~ 287 (393)
T PRK09705 209 TLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGF 287 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 66555555555555666677777765 45555567788889999999999999999999999998888877776666554
Q ss_pred H
Q 016986 369 L 369 (379)
Q Consensus 369 ~ 369 (379)
.
T Consensus 288 ~ 288 (393)
T PRK09705 288 I 288 (393)
T ss_pred H
Confidence 4
No 21
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=1.2e-30 Score=241.92 Aligned_cols=312 Identities=19% Similarity=0.218 Sum_probs=242.0
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 131 (379)
.+..+.++.++..++....++.+|.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV--QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh--hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4556777888888999999999999999999987777 89999999999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHH
Q 016986 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (379)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f 211 (379)
.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++++++..+..+|..++|.+++.+.++.+ ||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888 99999
Q ss_pred HHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHH--------H--HHhCCC-ch--hHHHH-----------HHHh
Q 016986 212 WVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEF--------E--KLLGGS-HV--KSSLA-----------ELSK 266 (379)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~--------~--~~~~~~-~~--~~~~~-----------~~~~ 266 (379)
++.++..++..+.. ++.||+++. .+++.+...... . ...+.. +. ..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99777766655443 446664321 111111110000 0 000000 00 00000 0000
Q ss_pred hhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 016986 267 LDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD 346 (379)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 346 (379)
.+.. .+++....++++++.++...+..++..+..+......|.|+.+.++.+..+.+....+..++.+++.++.|++.|
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~ 316 (485)
T TIGR00711 238 WELT-DDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGD 316 (485)
T ss_pred HHHc-CCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111 111222346788898888877777777777777777888888777777777888888999999999999999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHH
Q 016986 347 KLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 347 ~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
|++||+.+.++..+..++..++.
T Consensus 317 r~~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 317 KIDPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHh
Confidence 99999998888877777766654
No 22
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=1.2e-29 Score=230.89 Aligned_cols=286 Identities=18% Similarity=0.109 Sum_probs=200.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhh-hhhhc--cCCcchhHHHHHH-----HHHHHHHHHHHHhHHhhhccchhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLES-ISLDL--GFNGNTLAEGLVV-----SMCLGGAFIGSTLSGWIADGVGRRR 119 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~~~~~~~~~~~~-----s~~~~~~~i~~~~~g~l~d~~Grr~ 119 (379)
++++.+....++.+.++++...++.+.|. +.+++ +.++.. +++. ++.+++..+++++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 34567777888999999999988877774 45555 555442 4443 3455667899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcccchH--------HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 016986 120 AFQLCALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (379)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 191 (379)
+++.+.++++++++++++++|+. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 4888999999999999999999999999999999999999999999998
Q ss_pred HHHhhcccccc--------cchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHH
Q 016986 192 GSLLIGIPVKE--------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE 263 (379)
Q Consensus 192 ~~~~~~~~l~~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (379)
++..+...+.. ..+ ||+.|++.+++.++........||+|++...+++.++
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~-------------------- 234 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA-------------------- 234 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc--------------------
Confidence 88776655432 346 9999999877765544444557787754322111000
Q ss_pred HHhhhcCCCCCcchhhhhhcccchhHHHH-HHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 016986 264 LSKLDRGDDGDIVKFEELLYGRHFRVVFI-GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAM 342 (379)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 342 (379)
. +.+....+.++++++.+.... ..++.....+....+.+.|..+.++.+...........++..+++.++.|
T Consensus 235 ------~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g 307 (438)
T PRK09952 235 ------A-KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFA 307 (438)
T ss_pred ------c-cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000111223455555544432 22223333344445556665544333222222344456677788899999
Q ss_pred HHHHhhCchHHHHHHHHHHHHH
Q 016986 343 VLMDKLGRKALLQWSFFSMVIC 364 (379)
Q Consensus 343 ~l~d~~g~~~~~~~~~~~~~i~ 364 (379)
+++||++||+.+..+.++..++
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~ 329 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLS 329 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHH
Confidence 9999999999887766554443
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.98 E-value=4.1e-30 Score=230.37 Aligned_cols=279 Identities=14% Similarity=0.166 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 132 (379)
+....+..+..+.......+.+|.+++|+|.+.++. +++.+++.+++.++++++|+++||+|||+++..+.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAA--GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH--hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 445556667777777788889999999999987777 999999999999999999999999999999999999999999
Q ss_pred HHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHH
Q 016986 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (379)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~ 212 (379)
+++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++.+++.+.+..+ ||+.|+
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~ 161 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTFL 161 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHHH
Confidence 9999999999999999999999999888888999999999999999999999999999999999999888878 999999
Q ss_pred HHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHH
Q 016986 213 VSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (379)
Q Consensus 213 ~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (379)
+.++..++..+. ..++||.++ +.+ .+.+ +..+.++++..+...
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~----~~~-~~~~-------------------------------~~~~~~~~~~~~~~~ 205 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRD----EAK-GGLR-------------------------------EQFHFLRSPAPWLIF 205 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCc----ccc-cCHH-------------------------------HHHHHhcChHHHHHH
Confidence 977766555443 345676531 100 0000 011234555555443
Q ss_pred HHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
....+.....+....+.+.+..+.++.+....+......+++.++++++.+++.||+++|+.+..+..+..++.+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~ 284 (382)
T PRK10091 206 AATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH
Confidence 3333322222222233344444434444445667888899999999999999999999999888887777776655543
No 24
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.3e-32 Score=232.91 Aligned_cols=281 Identities=19% Similarity=0.193 Sum_probs=231.2
Q ss_pred CccchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH
Q 016986 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (379)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~ 123 (379)
.+.+..++.+.++++.+.++.++...+..+.+.+++.+|++++.. |++.+.+.+.+.+++|++|+++|||.||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~--Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL--GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc--cchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 344556778889999999999999999999999999999998887 999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 124 CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
|.+++.++.+++++++.+|+++++|.+.|+|.+...|+.+++++|.+|..+|++++++++.+..+|..+|.+++..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhh-cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhh
Q 016986 204 AGWWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (379)
.++|||.|++.+++++++.++.++ .+|+ + ++..++.... .+......+...+.+.+.
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP-~----rga~~~~~~~-----------------~~~~~~~ts~~kDl~~l~ 241 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREP-E----RGARDEVDGE-----------------NKMVKPFTSVWKDLKVLA 241 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCc-c----cccccccccC-----------------CcCCCCccchHHHHHHHH
Confidence 888999999999998887776655 5554 2 2211111100 000112233345666677
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCC--h-hHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS--S-GLANVFVGIANLLGSVVAMVLMDKL 348 (379)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (379)
+++.+....+......+...+.--+.|.+.+..+...+.+ . -....+...++.+|.+++|.++||+
T Consensus 242 ~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 242 KIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred ccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 7788887777777777776666667777776666655432 2 2566677788899999999999994
No 25
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.9e-30 Score=236.15 Aligned_cols=282 Identities=16% Similarity=0.110 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
+.......+..+...++...++..+|.+.+++|++..+. +++.+++.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI--GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 455556667777777777788889999999999987776 999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHH
Q 016986 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (379)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~ 209 (379)
++.++++++++++.+++.|++.|++.|...+...+++.|++|+++|++++++++.+..+|..+++.+.+.+.+..+ ||+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~~ 178 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WRY 178 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988888 999
Q ss_pred HHHHHHHHHHHHH-HHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcch-h-hhhhcccc
Q 016986 210 CFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVK-F-EELLYGRH 286 (379)
Q Consensus 210 ~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~ 286 (379)
.|++.++..++.. +..++++|+|++...+...+...+. . +..+..+.+..+..+ + ...++++.
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA----------L----ELAQQQEGAGLSRKEILTKYVLLNPY 244 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc----------c----ccchhccccCCChhhhHHHHHhcChH
Confidence 9998777655443 3445678876532111100000000 0 000000000001111 1 12566777
Q ss_pred hhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 287 FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (379)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (379)
++...+..++..........+.|.|+.+.++.+..+.+.......++.++++++.|+++||+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 77766655555555555555667776555555555667788888999999999999999998
No 26
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=1.3e-29 Score=225.73 Aligned_cols=277 Identities=12% Similarity=0.050 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhh-hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
.++.+.+..++.++........++..+.+.+ ++|++.++. +++.+++.+++.++.++.|++.||+|.|+++.++.++
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~--g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll 109 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL--FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAI 109 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3567777777777777888888898888876 899988877 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc-----cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc-
Q 016986 128 MIIGASISATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK- 201 (379)
Q Consensus 128 ~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~- 201 (379)
+++.+++.+++ ++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++.+.+.
T Consensus 110 ~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 110 LIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999987 8999999999999997 7788899999999999999999999997666667665555443322
Q ss_pred ----c-------------cchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHH
Q 016986 202 ----E-------------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAEL 264 (379)
Q Consensus 202 ----~-------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (379)
. ..+ ||..+++.+++.++..+..+++.++++ +.
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~-~~~~~~~~~~~~iv~~i~~~~~~~~~~----~~------------------------- 238 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMS-LANAAWIWVPLLAIATIAAWSGMNDIA----SS------------------------- 238 (462)
T ss_pred HHHHHHhccccccccccchHH-HHHHHHHHHHHHHHHHHHHHHhCCCcc----cc-------------------------
Confidence 1 223 788887776766666555544433321 00
Q ss_pred HhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHH
Q 016986 265 SKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVL 344 (379)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 344 (379)
+....+.++.+|+|+.|...+..++.+..+.+...++|+|....+. ............+...+.++++|++
T Consensus 239 -------~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~L 309 (462)
T PRK15034 239 -------RASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAI 309 (462)
T ss_pred -------ccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 0112345568899999988888777776666666677777665442 1222223344567788899999999
Q ss_pred HHhhCchHHHHHHHHHHHHHHHH
Q 016986 345 MDKLGRKALLQWSFFSMVICSSI 367 (379)
Q Consensus 345 ~d~~g~~~~~~~~~~~~~i~~~~ 367 (379)
+||+|+++.+.++.+.+.++...
T Consensus 310 ADRiG~~~vl~~~~i~~~i~~~~ 332 (462)
T PRK15034 310 SDKFGGVRVTLINFIFMAIFSAL 332 (462)
T ss_pred HHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999998888766666533
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=1.1e-29 Score=229.77 Aligned_cols=291 Identities=17% Similarity=0.140 Sum_probs=226.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
++.+.....+.+..+...+....+.+.+|.+.+++|.+..+. ++..+.+.+++.+++++.|+++||+|||++++.+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV--PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 445666667777778878888888899999999999987766 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh
Q 016986 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (379)
..+++.++.+++++++.+++.|+++|++.+...+....++.|++|+++|.++.++......+|..++|.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~- 165 (406)
T PRK15402 87 FFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP- 165 (406)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-
Confidence 9999999999999999999999999999998888999999999999999999999988888999999999998888777
Q ss_pred hHHHHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhccc
Q 016986 207 WRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (379)
Q Consensus 207 wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (379)
||+.|++.++..++..+.. ...||+++.. ++..+ . .+...++++++++|
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~--------------------------~~~~~~~~~~~~~~ 215 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRV---GEKLS-L--------------------------KELGRDYKLVLKNR 215 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccc---ccccc-H--------------------------HHHHHHHHHHHcCc
Confidence 9999998777766655543 4467654210 00000 0 00112356678888
Q ss_pred chhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Q 016986 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICS 365 (379)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~ 365 (379)
.++...+...+............+.++.+.++.+..+.+.......++.+++.++.+++.||+++|+.+.++.++..++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 88776665555444433333445656555455444445666666777888999999999999999998888877766666
Q ss_pred HHHHH
Q 016986 366 SISLI 370 (379)
Q Consensus 366 ~~~~~ 370 (379)
.++..
T Consensus 296 ~~~~~ 300 (406)
T PRK15402 296 LLAAL 300 (406)
T ss_pred HHHHH
Confidence 55544
No 28
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=8.8e-30 Score=229.07 Aligned_cols=283 Identities=17% Similarity=0.164 Sum_probs=221.8
Q ss_pred HHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
..+....+..........+..|.+.+++|.+.++. +++.+++.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 85 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIV--QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSL 85 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHH
Confidence 33444445556677778889999999999987777 9999999999999999999999999999999999999999999
Q ss_pred HHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
+.+++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+.+..+ ||+.|++
T Consensus 86 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~~ 164 (385)
T TIGR00710 86 GLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIFAF 164 (385)
T ss_pred HHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999888878 9999998
Q ss_pred HHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHH
Q 016986 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (379)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
.++..++..+.. ++.||+++. +++++.. ......++.++++.++...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~ 213 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETLPY----EARIQIS---------------------------TYFETFLLLLKSKMFWGYAL 213 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC----cccCCHH---------------------------HHHHHHHHHHcCchhHHHHH
Confidence 777666554443 446665321 1100000 00123456677888777665
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
...+............+.+..+.++.++.+.+.......++.+++.++.|++.||+++|+.+..+..+..++..++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 214 IYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 555544444444445555655555555555677888888999999999999999999999888777666666555443
No 29
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=232.48 Aligned_cols=274 Identities=15% Similarity=0.102 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
++.+...+...+...+......+..|.+.+++|++.++. +++.+++.+++.+++++.|+++||+|||+++..+.++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDI--GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 445555555666666666667888999999999987776 889999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc----c---
Q 016986 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK----E--- 202 (379)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----~--- 202 (379)
++.++++++++++.++++|+++|++.+... ....+++|++|+++|++++++......+|..+++.+.+.+. +
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999887654 45678999999999999999998777777766655554332 1
Q ss_pred --cchhhHHHHHHHHHHHHHHHHHHhhcCCC-hhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhh
Q 016986 203 --IAGWWRICFWVSIVPAAILCLAMVFCAES-PHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFE 279 (379)
Q Consensus 203 --~~~~wr~~f~~~~~~~~~~~~~~~~~~e~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (379)
..+ ||+.|++.+++.++..+..++++++ |+ ++.++..+ +.+..+......++
T Consensus 192 ~~~~g-Wr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~~-------------------~~~~~~~~~~~~~~ 246 (476)
T PLN00028 192 PSFTA-WRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELKK-------------------SGTMPKDSFSKVLR 246 (476)
T ss_pred cchhh-hHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHHh-------------------cCccccccHHHHHH
Confidence 235 9999999888777666555555443 31 11000000 00000001112356
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 016986 280 ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 351 (379)
+.++++.+|...+..+...........+.+.|+.+.++.+..+++.......++.+++++++|+++||++||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 247 YGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 667788877666555444444444455666666554455545567788888999999999999999999765
No 30
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=4.4e-29 Score=227.37 Aligned_cols=279 Identities=20% Similarity=0.249 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHH-----HHHHHHHHHhHHhhhccchhHHHHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC-----LGGAFIGSTLSGWIADGVGRRRAFQLC 124 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~-----~~~~~i~~~~~g~l~d~~Grr~~l~~~ 124 (379)
++....++++.+++.+|...++...|.+.+|++.+..+.. ++..+.. .++..+++++.|+++||+|||++++.+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFA-SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchH-HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4567788889999999999999999999999998766541 2333322 223347899999999999999999999
Q ss_pred hHHHHHHHHHHhcccchHH--------HHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhh
Q 016986 125 ALPMIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (379)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (379)
.+++++++++++++++++. ++++|+++|++.+...+....+++|++|+++|++++++.+.+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 68899999999999999889999999999999999999998888888777777
Q ss_pred ccccc--------ccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhh
Q 016986 197 GIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLD 268 (379)
Q Consensus 197 ~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (379)
++.+. +..+ ||+.|++..+...+........||++++..+++
T Consensus 173 g~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~----------------------------- 222 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH----------------------------- 222 (434)
T ss_pred HHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-----------------------------
Confidence 66552 3456 999998755433222222222333321100000
Q ss_pred cCCCCCcchhhhhhcccchhHH-HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 016986 269 RGDDGDIVKFEELLYGRHFRVV-FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (379)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (379)
+.+....+++..+++..+.. ....++.....+....+.|.|+.+.++.+..+.+.......++.+++.++.|+++||
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr 300 (434)
T PRK15075 223 --RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR 300 (434)
T ss_pred --ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001112223333332222 111122222233344455666655445544455677778888999999999999999
Q ss_pred hCchHHHHHHHHHH
Q 016986 348 LGRKALLQWSFFSM 361 (379)
Q Consensus 348 ~g~~~~~~~~~~~~ 361 (379)
++||+.+..+....
T Consensus 301 ~g~r~~~~~~~~~~ 314 (434)
T PRK15075 301 IGRRPVLIAFTVLA 314 (434)
T ss_pred hcchHHHHHHHHHH
Confidence 99999877655443
No 31
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=9.8e-30 Score=225.07 Aligned_cols=248 Identities=13% Similarity=0.027 Sum_probs=185.2
Q ss_pred hhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHH
Q 016986 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIG 143 (379)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 143 (379)
......+++.+|.+++|+|++.++. |++.+++.+++.+++++.|+++||+|||++++.+......+.+.....+|+++
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDVSKEEL--GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3445567889999999999987776 99999999999999999999999999999877665555454433334479999
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 016986 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 144 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
++++|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.++++++++.+.+..+ ||+.|++.++++++..+
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHH
Confidence 99999999999986 45566677999999999999999999999999999999999998888 99999997666655444
Q ss_pred -HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHh
Q 016986 224 -AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (379)
Q Consensus 224 -~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
..+++||+|++. ++..+.. + ...++++++++|.++...+..++.....+
T Consensus 160 ~~~~~lp~~p~~~---~~~~~~~-----------------~----------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 209 (368)
T TIGR00903 160 LVLAALPALPFQA---AEGFGFK-----------------D----------AVKEFGALAGRKDLWIIGAILGFGVALFD 209 (368)
T ss_pred HHHHHcCCCCCCC---CCCcchH-----------------H----------HHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 456689887531 1000000 0 01136788999999998888888888877
Q ss_pred hchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 016986 303 SGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGR 350 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 350 (379)
...++.|.|+.+ .+.+ .+.+.......+.+. +..++++||..|
T Consensus 210 ~~~~wlp~~L~~-~g~s-~~~~~~~~l~~~~g~---~g~~~~~d~~~r 252 (368)
T TIGR00903 210 NLAIWLEAALRP-AGLE-DIAGDAVALAILAGL---IGVAVIPDRVAR 252 (368)
T ss_pred HHHHHHHHHHHH-CCCC-hHHHHHHHHHHHHHH---HHHHHhhHHhhh
Confidence 777788887754 2322 223444444444444 445778887654
No 32
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=2.4e-29 Score=226.40 Aligned_cols=285 Identities=15% Similarity=0.132 Sum_probs=218.9
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
+++....+++..+..+......++.+|.+.+++|++.++. +++.+.+.+++.+++++.|++.||+|||++++.+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM--SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3556667778888888888888999999999999987777 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc-cchhh
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-IAGWW 207 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~w 207 (379)
+++.++.+++++++.+++.|+++|++.+...+....++.|++|+++|+++++..+....+|..++|.+.+.+.. ..+ |
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w 161 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-W 161 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-H
Confidence 99999999999999999999999999999988899999999999999999999988889998899988877654 456 9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
|+.|.+.++..++..+..++ .+.|+. +++.++ +.+.. .++. .++.+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~-~~~p~~---~~~~~~-------------------------~~~~~----~~~~-~~~~~ 207 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLF-SEFPAL---GKHAPK-------------------------ADKPV----AKEK-WGIGV 207 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCccc---cccCcc-------------------------ccCcc----cccc-CChHH
Confidence 99999877766555444333 222210 000000 00000 0001 12344
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSI 367 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~ 367 (379)
+...+..++.....+....+.|.|+.+.++.+..+.+.......++.++++++.++++||+++|+.+.....+..+...+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 208 LFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 44444455555555566677888877666666666778888888999999999999999999999887776666555544
Q ss_pred HHH
Q 016986 368 SLI 370 (379)
Q Consensus 368 ~~~ 370 (379)
+..
T Consensus 288 ~~~ 290 (394)
T PRK03699 288 FVN 290 (394)
T ss_pred HHH
Confidence 443
No 33
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=4.5e-29 Score=225.30 Aligned_cols=266 Identities=16% Similarity=0.139 Sum_probs=208.4
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
.+.+..+...+......+.+|.+.+++|.+.++. ++..+++.++++++++++|+++||+|||++++.+.++++++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA--PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 3444556666777888999999999999987777 89999999999999999999999999999999999999999999
Q ss_pred HhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Q 016986 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (379)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~ 214 (379)
+++++|++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+ ||+.|++.
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~ 176 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAII 176 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHH
Confidence 99999999999999999999987777788899999999999999999999999999999999999888777 99999998
Q ss_pred HHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHH
Q 016986 215 IVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (379)
Q Consensus 215 ~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
++..++..+. .+++||+++. +++..+.. ....+++++++||.++...+.
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~~---~~~~~~~~---------------------------~~~~~~~~ll~~~~~~~~~l~ 226 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVKR---GAVPFSAK---------------------------SVLRDFRNVFRNRLFLTGAAT 226 (413)
T ss_pred HHHHHHHHHHHHHhCCCCccc---cCCCCChH---------------------------HHHHHHHHHHcCHHHHHHHHH
Confidence 8777666554 3457876421 11000000 001245678899998887766
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHH
Q 016986 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKAL 353 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 353 (379)
..+.....+......|.++.+.++.+..+.++.......+.+++..+.+.+.++..+++.
T Consensus 227 ~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 227 LSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred HHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Confidence 666555555545556666666555555556777777778888888887777655444333
No 34
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=5.1e-29 Score=226.02 Aligned_cols=290 Identities=13% Similarity=0.116 Sum_probs=215.3
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
....+..+.+..++.++.....++..|.+++++|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~--gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA--GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3445556666677778888888999999999999987777 99999999999999999999999999999999999999
Q ss_pred HHHHHHH---hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc-c-
Q 016986 129 IIGASIS---ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-I- 203 (379)
Q Consensus 129 ~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~- 203 (379)
+++++++ .++++++.++++|+++|+|.+...+....++.|+.|+++|...+++.+..+.+|..+++.+++.+.. .
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999875 5789999999999999999999999999999998877777778999999999999999988765430 0
Q ss_pred ----------------ch-------hhHHHHHHHH-HHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchh
Q 016986 204 ----------------AG-------WWRICFWVSI-VPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVK 258 (379)
Q Consensus 204 ----------------~~-------~wr~~f~~~~-~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (379)
.+ .||++|+... +..++.++. ....||.+. ++.++
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~--------------- 241 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSD--------------- 241 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----ccccc---------------
Confidence 11 2666665433 333232222 222443211 00000
Q ss_pred HHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhH-HHHHHHcCCChhHHHHHHHHHHHHH
Q 016986 259 SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS-SSVFKSAGLSSGLANVFVGIANLLG 337 (379)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (379)
+...+...+.++++++|.++...+..+++.........+.+.|+ ++.++.++...+.......++.++|
T Consensus 242 ----------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG 311 (438)
T PRK10133 242 ----------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIG 311 (438)
T ss_pred ----------ccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 00011123456788889888766666666666555556666564 3344555556778889999999999
Q ss_pred HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 338 SVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 338 ~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
+++++++.||+++|+.+..+..+..+.+++..+
T Consensus 312 ~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 344 (438)
T PRK10133 312 RFTGTWLISRFAPHKVLAAYALIAMALCLISAF 344 (438)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888777666555554443
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=7.8e-30 Score=230.18 Aligned_cols=278 Identities=17% Similarity=0.137 Sum_probs=218.9
Q ss_pred HHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccc
Q 016986 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN 140 (379)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~ 140 (379)
+...++...++...|.+.+++|.+..+. +++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 81 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQY--GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGA 81 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhhH--HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcC
Confidence 4556677778888999999999987777 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH
Q 016986 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (379)
Q Consensus 141 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 220 (379)
++.++++|+++|++.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+..+ ||+.|++.++..++
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888888 99999987777666
Q ss_pred HHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHH
Q 016986 221 LCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFAL 299 (379)
Q Consensus 221 ~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
..+.. ++.||+|+... ..++++.....+... ...+.++.++......++.+++|.++...+..++...
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAK-WLTEEEKYIVVGGLL----------AEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI 229 (399)
T ss_pred HHHHhhheecCCCCccc-cCCHHHHhhcchhhc----------cccccccccCCCccchHHHhcCHHHHHHHHHHHHHHh
Confidence 55544 44566543110 001111000000000 0000111222334456788888888888777777777
Q ss_pred HHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchH
Q 016986 300 QQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKA 352 (379)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 352 (379)
.......+.+.|..+.++.+..+.+.......++.+++.++.|++.||++||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 76666777777777666666666778888889999999999999999999885
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=6.7e-30 Score=229.09 Aligned_cols=286 Identities=18% Similarity=0.122 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 131 (379)
.+....+..+..+. ....++..|.+.+++|++.++. +++.+++.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 5 VLVGTVIMCFTSGY-VYTWTLLAPPLGRYFGVGVTAV--AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred EeHHHHHHHHHhhH-HhhhhhHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 33334444444433 4456889999999999987777 99999999999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHH
Q 016986 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (379)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f 211 (379)
.+++++++|++.++++|++.|++.+...+.....+.|++| ++|+++.++...+..+|..+++.+.+.+.+..+ ||+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f 159 (377)
T TIGR00890 82 FTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAF 159 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHH
Confidence 9999999999999999999999999888888889999997 579999999999999998776666666666667 99999
Q ss_pred HHHHHHHHHHHHHHh-hcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHH
Q 016986 212 WVSIVPAAILCLAMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (379)
Q Consensus 212 ~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (379)
++.++..++..+..+ +.+++|+. +.++++ ....+..+.++.++++.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~ 210 (377)
T TIGR00890 160 IYMGIIFLLVIVLGAFLIGYPPGQ---LIKTNI--------------------------EVSVKDYTVWEMLRTPQFWVL 210 (377)
T ss_pred HHHHHHHHHHHHHHHHheecCchh---ccccCc--------------------------ccchhhhhHHHHHcCccHHHH
Confidence 998877766655543 44443321 000000 000111234567788887766
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
....++............+.|..+ ++.+..+.+.......++.++++++.|++.||++||+.+.++.....++.+++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 289 (377)
T TIGR00890 211 YLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLF 289 (377)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 555444443333323333333222 2222233456778888999999999999999999999988888877777766654
Q ss_pred HH
Q 016986 371 LE 372 (379)
Q Consensus 371 ~~ 372 (379)
.+
T Consensus 290 ~~ 291 (377)
T TIGR00890 290 IP 291 (377)
T ss_pred cc
Confidence 43
No 37
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=3.9e-29 Score=223.17 Aligned_cols=287 Identities=16% Similarity=0.114 Sum_probs=224.0
Q ss_pred HHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH
Q 016986 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (379)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 135 (379)
+..+.++..+......+.+|.+..+++.+..+. +++.+++.++..++++++|+++||+|||++++.+.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVL--SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 345566667777777888899999988876666 999999999999999999999999999999999999999988888
Q ss_pred hccc-----chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHH
Q 016986 136 ATTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (379)
Q Consensus 136 ~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~ 210 (379)
++++ +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..+ ||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHH
Confidence 8877 999999999999999999999999999999999999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHHhhc--CCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchh
Q 016986 211 FWVSIVPAAILCLAMVFC--AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (379)
Q Consensus 211 f~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (379)
|++.++..++..+..+++ ||+++ +++.+..++.. + +....+++++++|.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------------~----------~~~~~~~~~~~~~~~~ 213 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAA----SEIQALSNAVL-------------R----------DTREGIKFVLKNPLLR 213 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCC----ccccccchhHH-------------H----------HHHhHHHHHHcCcHHH
Confidence 998777665554444333 22211 00000000000 0 0012356677888888
Q ss_pred HHHHHHHHHHHHHhhch-hHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q 016986 289 VVFIGSTLFALQQLSGI-NAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSI 367 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~ 367 (379)
......++......... ...++|..+.++.+..+.+.......++.+++.++.+++.||++||+.+..+..+.+++..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 214 TLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILV 293 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Confidence 77666666555554444 56777777666666666788888899999999999999999999999888877777776666
Q ss_pred HHHHH
Q 016986 368 SLILE 372 (379)
Q Consensus 368 ~~~~~ 372 (379)
+...+
T Consensus 294 ~~~~~ 298 (365)
T TIGR00900 294 VGLTP 298 (365)
T ss_pred HHhhc
Confidence 65554
No 38
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=3.4e-29 Score=230.41 Aligned_cols=287 Identities=14% Similarity=0.100 Sum_probs=225.9
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhh----------------------hccCCcchhHHHHHHHHHHHHHHHH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISL----------------------DLGFNGNTLAEGLVVSMCLGGAFIG 104 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~~~~~~~~~~~~s~~~~~~~i~ 104 (379)
+.++....+++.+....+.++...+...+.+.+ |++++..+. |++.+++.+++.++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ--GLILSSHFYGQIII 92 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh--hHHHHHHHHHHHHH
Confidence 445777777888888888888888888877766 677766665 99999999999999
Q ss_pred HHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc--cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHH
Q 016986 105 STLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI 182 (379)
Q Consensus 105 ~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 182 (379)
+++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999998887544 56888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccccc-hhhHHHHHHHHHHHHHHHHHHhh-cCCChhHHHHcCChHHHHHHHHHHhCCCchhHH
Q 016986 183 QIATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSS 260 (379)
Q Consensus 183 ~~~~~~g~~~~~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (379)
..+..+|.++++.+++.+.+.. + ||+.|++.++..++..+.+++ .+|+|+.. +...++.++..++.
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~i~~~--------- 240 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSIH--PCISKFEKKYINSS--------- 240 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCcccC--CCCCHHHHHHHHhh---------
Confidence 9999999999999999988874 7 999999988877766555544 55665321 11111111111100
Q ss_pred HHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHH
Q 016986 261 LAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVV 340 (379)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (379)
.+.++.+.+....++++++++.++...+..+......+....++|.|+.+.++.+..+.+.......++.+++.++
T Consensus 241 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~ 316 (465)
T TIGR00894 241 ----LQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIF 316 (465)
T ss_pred ----cccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHH
Confidence 0001111122346888999999998888887777777777778888887777777777888888889999999999
Q ss_pred HHHHHHhhCch
Q 016986 341 AMVLMDKLGRK 351 (379)
Q Consensus 341 ~g~l~d~~g~~ 351 (379)
+|+++||+++|
T Consensus 317 ~g~l~d~~~~~ 327 (465)
T TIGR00894 317 AGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHc
Confidence 99999987543
No 39
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=1e-28 Score=227.79 Aligned_cols=312 Identities=17% Similarity=0.210 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 131 (379)
.+..++++.++..++...+++.+|.+.+++|.+..+. +++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM--HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 4456667778888888888899999999999987776 89999999999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHH
Q 016986 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (379)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f 211 (379)
.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+.+..+ ||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888 99999
Q ss_pred HHHHHHHHHHHHHHh-hcCCChhHHHHcCChHHHHHHHH---------HHhCCCc---hhHHH-----------HHHHhh
Q 016986 212 WVSIVPAAILCLAMV-FCAESPHWLYKKGRTAEAEAEFE---------KLLGGSH---VKSSL-----------AELSKL 267 (379)
Q Consensus 212 ~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~-----------~~~~~~ 267 (379)
++......+..+... ..|+++. .+.+.+....... ...+... ..... ......
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLH 244 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 987766655554443 3444321 1112111110000 0000000 00000 000001
Q ss_pred hcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 016986 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (379)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (379)
+....++..+ .++++||.+.......++............++|.+...+.++...++...+..++.+++.++.+++.||
T Consensus 245 ~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r 323 (471)
T PRK10504 245 ARNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR 323 (471)
T ss_pred HhcCCCCccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111122222 358899999888777777766655555667778777666666677788888888888999999999999
Q ss_pred hCchHHHHHHHHHHHHHHHHHHH
Q 016986 348 LGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 348 ~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
+|+|+.+..+..+..+..+++.+
T Consensus 324 ~g~~~~~~~~~~~~~~~~~~~~~ 346 (471)
T PRK10504 324 FGYRRVLVATTLGLALVSLLFML 346 (471)
T ss_pred cCchHHHHHHHHHHHHHHHHHHh
Confidence 99999988888777766655544
No 40
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=5.9e-29 Score=222.15 Aligned_cols=291 Identities=17% Similarity=0.153 Sum_probs=212.0
Q ss_pred HHHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
..+++.+..........+..|. +++++|++..+. +++.+++.+++.++++++|+++||+|||++++.+.++..++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL--GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh--hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 4555556666666777889995 999999988777 9999999999999999999999999999999999999999999
Q ss_pred HHhccc-chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc----------
Q 016986 134 ISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---------- 202 (379)
Q Consensus 134 ~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------- 202 (379)
++++++ +++.+++.|+++|++.+. .+....+++|++|+++|++++++......+|..+++.+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 999999999999998654 45678899999999999999999997777777777777655543
Q ss_pred cchhhHHHHH-HHHHHHHH-HHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhh
Q 016986 203 IAGWWRICFW-VSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEE 280 (379)
Q Consensus 203 ~~~~wr~~f~-~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (379)
..+ ||+.|+ ..++...+ .++...+.+|+|+. ++ ++.+...+. .. ...++......++
T Consensus 162 ~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~---~~------------~~~~~~~~~~~~~ 220 (366)
T TIGR00886 162 HLA-WGWAFVIVPAGILLLPALLIFFVGADTPPG----KP-ATGKLSFKG---AR------------WSVGTGALGDQLK 220 (366)
T ss_pred ccc-ccchhHHHHHHHHHHHHHHHHHhcccCCcc----cc-cchhccccc---cc------------ccccchhHHHHHH
Confidence 235 999994 43444333 33344556666531 11 110000000 00 0000011124566
Q ss_pred hhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Q 016986 281 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 360 (379)
.++++.++...+..++..........+.+.|+.+.++.+..+.+.......++.++++++.|+++||+++|+....+...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~ 300 (366)
T TIGR00886 221 VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLG 300 (366)
T ss_pred HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHH
Confidence 78888888777666666555556666777787776666666677778888889999999999999999998877666655
Q ss_pred HHHHHHHHH
Q 016986 361 MVICSSISL 369 (379)
Q Consensus 361 ~~i~~~~~~ 369 (379)
...+..++.
T Consensus 301 ~~~~~~~~~ 309 (366)
T TIGR00886 301 VAMGAFLVV 309 (366)
T ss_pred HHHHHHHHH
Confidence 555544443
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=2.8e-29 Score=222.95 Aligned_cols=286 Identities=22% Similarity=0.358 Sum_probs=219.1
Q ss_pred HHHHHHHhhhhccccchhh-hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH
Q 016986 57 TLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (379)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 135 (379)
+++.++..+......+.+| .+.+++|.+..+. +++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQI--GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH--HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 4556677777777888899 8999999988887 999999999999999999999999999999999999999997777
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHH
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~ 215 (379)
.+++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..+ ||+.|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence 7778888999999999999999999999999999999999999999999999999999999999998888 999999988
Q ss_pred HHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcc-hhhhhhcccchhHHHHH
Q 016986 216 VPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV-KFEELLYGRHFRVVFIG 293 (379)
Q Consensus 216 ~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 293 (379)
+..++..++. .+++++++....+++.++. ++++.+.. .++.+.+++.++.....
T Consensus 159 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPPPRERESPKESE------------------------SKKPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred chhhhhhhhHhhhhhhcccccccccccccc------------------------cccccccccccccccccchhhhhhhh
Confidence 8877776643 4455443211111110000 00001112 36677777877755555
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHc-CCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Q 016986 294 STLFALQQLSGINAIFYFSSSVFKSA-GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
.++..+.......+.+.|+.+.++.+ ..+.+.......+..+++.++.+++.||+++++..........+..+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLL 291 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 55555555566667777766667766 35566778888999999999999999999987766665555555554443
No 42
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.1e-28 Score=222.94 Aligned_cols=303 Identities=20% Similarity=0.267 Sum_probs=210.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
++++.+..+.+..+..+++....++..|.+.+++|.+..+. +++.+++.++..++.++.|+++||+|||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL--GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH--HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 44566666777777777877788889999999999987766 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhh
Q 016986 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (379)
.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~ 170 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-W 170 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988888 9
Q ss_pred HHHHHHHHHHHHH-HHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccc
Q 016986 208 RICFWVSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (379)
Q Consensus 208 r~~f~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (379)
|+.|++.++..++ ..+...++||++++..++ +.++..+..++.......+.. ++..+.+..+.......+.+++++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ-SALPEQKATQGTKRSVFKALFQGKT 248 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc-ccccccccccchhhHHHHHHhcchh
Confidence 9999987544444 444456688887654433 222222222221111000000 0000000000011111222333333
Q ss_pred hhHHH---HHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHH
Q 016986 287 FRVVF---IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (379)
Q Consensus 287 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 356 (379)
.+... ...++..........+.+. ....++.+..+.+.......++.+++.++.++++||+++|+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (398)
T TIGR00895 249 ARITVLLWLLYFMLLVGVYFLTNWLPK-LMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALL 320 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 32222 2222222222222233332 222233334446678888899999999999999999998844433
No 43
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=2.6e-28 Score=219.86 Aligned_cols=284 Identities=17% Similarity=0.134 Sum_probs=213.6
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
......+..........+.+|.+.+++|.+.++. ++..+.+.++..+++++.|+++||+|||++++.+.++..++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQL--HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3444445555555556688999999999987766 89999999999999999999999999999999999999999999
Q ss_pred HhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Q 016986 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (379)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~ 214 (379)
+..+++++.+++.|+++|++.+...+....++.|++|+++|+++.++.+....+|..++|.+++.+.+..+ ||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~ 163 (392)
T PRK10473 85 CSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTM 163 (392)
T ss_pred HHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988877777 99999987
Q ss_pred HHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHH
Q 016986 215 IVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (379)
Q Consensus 215 ~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
++..++..+. .+++||+++. +++++ .......++.++++.++.....
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~----~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~ 211 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPA----RAPAA----------------------------SSKPRENSESLLNRFFLSRLVI 211 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCc----ccCCc----------------------------cchHHHHHHHHhCHHHHHHHHH
Confidence 7766655444 4556765321 00000 0001123345666666554433
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH
Q 016986 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
..+............+.+..+.++.+..+.+......+++.+++.++.+++.||+++|+.+..+..+..++.+++.....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 212 TTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332222222333344444444444334567777888999999999999999999999988888777777666665443
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=5.1e-28 Score=224.74 Aligned_cols=316 Identities=18% Similarity=0.225 Sum_probs=216.4
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
++++.+..++++.+++.++....++..|.+.+++|++..+. +++.+.+.+++.+++++.|+++||+|||++++.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA--ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45677778888888999999999999999999999987776 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhh
Q 016986 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (379)
.+++.++.++++|++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..+++.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-W 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988888 9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHH-H------H-HhhhcCCCCCcch--
Q 016986 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLA-E------L-SKLDRGDDGDIVK-- 277 (379)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~-~~~~~~~~~~~~~-- 277 (379)
|+.|++.++..++.++.....||++++..++++.++..+..+.....+....... . . .............
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAV 253 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH
Confidence 9999886555544444445577765543222111111111111000000000000 0 0 0000000000000
Q ss_pred -----------hhhhhcccchhHHH---HHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Q 016986 278 -----------FEELLYGRHFRVVF---IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMV 343 (379)
Q Consensus 278 -----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 343 (379)
.....+.+..+... ...+......+....++|.|+...++.+..+.+.......++.+++.++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~ 333 (496)
T PRK03893 254 LGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGF 333 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000111100 0111111111112234555554444444455678888899999999999999
Q ss_pred HHHhhCchHHHHHHHHHHHHHHH
Q 016986 344 LMDKLGRKALLQWSFFSMVICSS 366 (379)
Q Consensus 344 l~d~~g~~~~~~~~~~~~~i~~~ 366 (379)
++||+++|+.+..+..+..+..+
T Consensus 334 l~dr~g~~~~~~~~~~~~~~~~~ 356 (496)
T PRK03893 334 LGDWLGTRKAYVCSLLISQLLII 356 (496)
T ss_pred HHHHhcchHHHHHHHHHHHHHHH
Confidence 99999999888777655554443
No 45
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=1.5e-27 Score=213.90 Aligned_cols=277 Identities=19% Similarity=0.174 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 130 (379)
+.+..+..+.++........++.+|.+.+++|.+..+. |++.+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV--GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667778888888999999999999999977666 9999999999999999999999999999999999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHH
Q 016986 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (379)
Q Consensus 131 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~ 210 (379)
+.+++++++|++.++++|+++|++.+...+.....+.+..++++|++++++++.+.++|..+|+.+++.+.+... |...
T Consensus 84 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~ 162 (381)
T PRK03633 84 GCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM-SVLP 162 (381)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-chHH
Confidence 999999999999999999999999999988888888899999999999999999999999999999998876542 2333
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHH
Q 016986 211 FWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (379)
Q Consensus 211 f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (379)
+.. +...... +...+.+.+++ +.+ + ++..+.++.++++.++..
T Consensus 163 ~~~-~~~~~~~-~~~~~~~~~~~----~~~-----------------------------~--~~~~~~~~~~~~~~~~~~ 205 (381)
T PRK03633 163 WVT-GLVLAAI-LPLLFTRILNQ----QAE-----------------------------N--HDSTSIWPMLKLRQARLG 205 (381)
T ss_pred HHH-HHHHHHH-HHHHHhcccCC----CCC-----------------------------C--CCCCCHHHHHHhcchHHH
Confidence 222 2211111 11122111110 000 0 011234556777777654
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q 016986 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSIS 368 (379)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~ 368 (379)
....+...........++|.|..+ .+.+....+.......++.+++++..|++.||+++|+.+..+.....++.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 206 VNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 443333333333444455666543 23333345677778888999999999999999999998887777666655443
No 46
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=3.7e-28 Score=222.34 Aligned_cols=287 Identities=13% Similarity=0.100 Sum_probs=204.4
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
+|..+...++.......+....+...|.+.++ |++.++. +++.+++.+++.++++++|+++||+|||++++.+.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~--g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL--GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH--HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 35544555555555566666667788888888 9887776 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhcc----cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHH-HHHHhhccccccc
Q 016986 129 IIGASISATT----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEI 203 (379)
Q Consensus 129 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~ 203 (379)
+++.+.++++ ++++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|. +.+|+++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 9999888775 3788889999999999999888888889999999999999999999999886 4566554333333
Q ss_pred chhhHHHHHHHHHHHHHH-HHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcch-hhhh
Q 016986 204 AGWWRICFWVSIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVK-FEEL 281 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 281 (379)
.+ ||+.|++.++..++. ++..+++||+|+.... ++.++.++... . +..+.++.+.+.... .+.+
T Consensus 184 ~g-w~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~ 249 (452)
T PRK11273 184 ND-WHAALYMPAFAAILVALFAFAMMRDTPQSCGL-PPIEEYKNDYP---------D---DYNEKHEQELTAKQIFMQYV 249 (452)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC-CChhhhhhccc---------c---ccccccCCCccHHHHHHHHH
Confidence 45 999999877666554 4445667887653110 11111000000 0 000000000000111 1236
Q ss_pred hcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhh--CchH
Q 016986 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL--GRKA 352 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~ 352 (379)
++++.++...+..++.....+....++|.|+.+..+.+..+.+.......++.+++.++.|+++||+ +||.
T Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 250 LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 7888888877777666666666667788887766555555567777788899999999999999998 4444
No 47
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=7.6e-29 Score=222.73 Aligned_cols=302 Identities=19% Similarity=0.171 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHHHhhhhc-cccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 50 FPHVLVATLSSFLFGYHLG-VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
+..+..++...+....+.. ...+.+-.+.+|.++..++. +.+.++++++++++.++.+.|.||++..+.+....+++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l--~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL--GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh--hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHH
Confidence 4444445555555555543 34445555778888887777 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc------c
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------E 202 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~ 202 (379)
++..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|+..++++.+...+|.++|.+++..+. .
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 9999888889999999999999999999999999999999999999999999999999999999999988863 2
Q ss_pred cchhhHHHHHHHHHHHHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhh
Q 016986 203 IAGWWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEEL 281 (379)
Q Consensus 203 ~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (379)
..| |||.|++.+++.++..+ .++++|++|....-..+.|+ .-..++. ++.......++.++..+++.
T Consensus 202 ~~g-W~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek-~~~~~~~----------~~~~~~~~~~~~~~~~~~~a 269 (495)
T KOG2533|consen 202 LAG-WRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEK-ELVVERL----------RESPSGGIENKFKWKGFKEA 269 (495)
T ss_pred cCC-ceeehhHHHHHHHHHHheEEEEecCChhhccccchHHH-HHHHHHH----------HhccCCCcccccCHHHHHHH
Confidence 345 99999998887777655 45679999862100111110 0000000 00001111122556778999
Q ss_pred hcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHh----hCchHHHHHH
Q 016986 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK----LGRKALLQWS 357 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~ 357 (379)
++++..|...++.++.....++..++.|.++....+.+..+++.+..+..++++++.+++|+++|| ..+|......
T Consensus 270 ~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~ 349 (495)
T KOG2533|consen 270 LKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVF 349 (495)
T ss_pred HhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 999999999999999999988888889988877444666778899999999999999999999999 5556555544
Q ss_pred HHHHHHHH
Q 016986 358 FFSMVICS 365 (379)
Q Consensus 358 ~~~~~i~~ 365 (379)
..+..+..
T Consensus 350 ~~~~~~~g 357 (495)
T KOG2533|consen 350 LCLYAIIG 357 (495)
T ss_pred HHHHHHHH
Confidence 44444433
No 48
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=1.6e-27 Score=215.35 Aligned_cols=267 Identities=18% Similarity=0.195 Sum_probs=203.9
Q ss_pred HHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc
Q 016986 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (379)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~ 139 (379)
..+..+....+.|.+|.+.+++|.+.++. +++.+++.++..++++++|+++||+|||++++.+.++..++.+++++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAV--SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 44445566677788999999999987776 9999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
+++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+..+ ||+.|++.++..+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHH
Confidence 999999999999999888888888999999999999999999988889999999999999988888 9999998877777
Q ss_pred HHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHH
Q 016986 220 ILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFAL 299 (379)
Q Consensus 220 ~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
+..+..++++|+++ +++.++ +..+++++++++.++...+...+...
T Consensus 172 ~~~~~~~~~~~~~~----~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (401)
T PRK11043 172 LLILPTLRLKPSKK----ARKQSQ------------------------------DALTFKQLLKSKTYLGNVLIFAACSA 217 (401)
T ss_pred HHHHHHHHcCCCCC----ccccch------------------------------HHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 66665555665532 000000 01235566777776654443333333
Q ss_pred HHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Q 016986 300 QQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVIC 364 (379)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~ 364 (379)
..+....+.|.+..+ ++.+..+.+.......++.+++.++.+++.||+++|+..........++
T Consensus 218 ~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~ 281 (401)
T PRK11043 218 AFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVS 281 (401)
T ss_pred HHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 333334445555433 3333334566667777888899999999999999888665544444433
No 49
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.4e-28 Score=207.72 Aligned_cols=288 Identities=15% Similarity=0.125 Sum_probs=239.5
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
..+.+.+..+......+.....+++.+.+.+|+|+|++|. +++.++..+..++.-++.|.+.||+|.|++...++++.
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~--~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQK--GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHH--HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 3556666666666667777778888899999999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchH---HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 129 IIGASISATTRNLI---GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 129 ~~~~~~~~~~~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
.+-++..+++.+.+ ++++++.+.|++ |..+.+...++++|||++++|.++|++. ..++|..+..++++.+....+
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 99999999886555 999999999995 5566788899999999999999999999 889999999999998888777
Q ss_pred h--hHHHHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhh
Q 016986 206 W--WRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (379)
Q Consensus 206 ~--wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (379)
. ||....+..+..++..+.. +...|.|+. +.+.++ ......+.++
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~---r~~~~~-----------------------------~~~~~~~~v~ 215 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEH---RASVKP-----------------------------QLPAQLKAVF 215 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh---hccccc-----------------------------cchhHHHHHh
Confidence 3 8988888777776655554 445565532 010000 0003466778
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 016986 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMV 362 (379)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 362 (379)
++++.|...+..+..+..+.....+++.|+.+.++.++.++|.......+.+.+.++++|+++||+|.+|.+...+..+.
T Consensus 216 ~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 216 SNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMA 295 (417)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHH
Confidence 89999999999999988888888999999999999999999988888899999999999999999999999888888888
Q ss_pred HHHHHHHHHH
Q 016986 363 ICSSISLILE 372 (379)
Q Consensus 363 i~~~~~~~~~ 372 (379)
++..+.....
T Consensus 296 ~~~~~l~~~~ 305 (417)
T COG2223 296 LAAALLSLFL 305 (417)
T ss_pred HHHHHHHccc
Confidence 7777666543
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=9.2e-28 Score=215.48 Aligned_cols=272 Identities=13% Similarity=0.061 Sum_probs=203.0
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
..+.+.++..+.........+.+.++++.+..+. +++.+.+.+++.++++++|+++||+|||++++.+.++.++++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQ--PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 3455566666654444555566778888776555 89999999999999999999999999999999999999998888
Q ss_pred HhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Q 016986 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (379)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~ 214 (379)
++++.+. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|.++||.+++.+.+.. |+..+.+.
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~~~~i~ 159 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEAALAVC 159 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 7777664 778999999999999999999999999999999999999999999999999999998753 77777766
Q ss_pred HHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHH
Q 016986 215 IVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGS 294 (379)
Q Consensus 215 ~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (379)
+...++..+..+.+||+|+.. ++++++..+..+ +. ....+.++++|.++......
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~-------------~~----------~~~~~~l~~~~~~~~~~~~~ 214 (393)
T PRK11195 160 ALIYLLAALFNLFIPRLGARR--PGQSWNPIALLR-------------DF----------FHACRVLWRDKLGRFSLAGT 214 (393)
T ss_pred HHHHHHHHHHHhcCCCCcccc--cccCCCHHHHHH-------------HH----------HHHHHHHHhCchhHHHHHHH
Confidence 555444444456677765321 101111000000 00 01235667777776655444
Q ss_pred HHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHH
Q 016986 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSF 358 (379)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 358 (379)
.+............+.|.++.++.++.+.|......+++.+++.++.+++.||.++++.+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 215 TLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Confidence 4444433444455666777777777778889999999999999999999999988887776664
No 51
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=7.1e-28 Score=215.99 Aligned_cols=266 Identities=16% Similarity=0.203 Sum_probs=208.2
Q ss_pred hhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHH
Q 016986 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (379)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 145 (379)
......|.+|.+.+++|++.++. +++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSV--QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 44556789999999999987777 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH-
Q 016986 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA- 224 (379)
Q Consensus 146 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~- 224 (379)
+.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+++.+.+..+ ||+.|++.++..++..+.
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988777 999999877766665443
Q ss_pred HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhc
Q 016986 225 MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSG 304 (379)
Q Consensus 225 ~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
.++.||+++. +++.+. ..+....++++.++++..+...+...+........
T Consensus 163 ~~~~~~~~~~---~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T PRK11102 163 FFFIPETLPK---ERRQPF--------------------------HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSF 213 (377)
T ss_pred HHhCCccCcc---cccCCC--------------------------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 4556765321 000000 00001123456777777766555544444333333
Q ss_pred hhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 016986 305 INAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVI 363 (379)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i 363 (379)
..+.+.+..+.++.+..+.+.......++.+++.++.+++.||+|+|+.+..+..+..+
T Consensus 214 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 214 LTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34444555554555555677888888999999999999999999999988877665443
No 52
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.6e-27 Score=215.34 Aligned_cols=280 Identities=18% Similarity=0.163 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
.+.+..+.+..++..+......+.+|. +.+++|.+..+. |++.+++.+++.+++++.|+++||+|||++++.+.++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA--GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH--HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 345556667777777788888888886 678899987776 99999999999999999999999999999999999988
Q ss_pred HHHHHHHhcc---c-----chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccc
Q 016986 129 IIGASISATT---R-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (379)
Q Consensus 129 ~~~~~~~~~~---~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (379)
+++.+.+.++ + +++.+++.|+++|++.+...+....++.|++|+++|++++++.+.+..+|.++++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 8876665443 2 5678899999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhh
Q 016986 201 KEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEE 280 (379)
Q Consensus 201 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (379)
.+..+ ||+.+++.++..++..+.....|++++ ++ ++ +.++++
T Consensus 172 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~-------------------------------~~~~~~ 213 (399)
T PRK05122 172 YHWGG-LAGLGLLIMLLALLGLLLARPRPAVPP-----VK-GE-------------------------------RLPFRR 213 (399)
T ss_pred HHccc-HHHHHHHHHHHHHHHHHHHhcCCCCCC-----CC-cc-------------------------------chhHHH
Confidence 88888 999888766554443332222232211 00 00 001111
Q ss_pred hhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Q 016986 281 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (379)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 360 (379)
.++ ..+.......+..+.......+.+.|..+ .+. ...+.......++.+++.++.|++.||+++|+.+..+..+
T Consensus 214 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 288 (399)
T PRK05122 214 VLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLV 288 (399)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 121 11111111122222222233344444332 111 2345666778888999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHh
Q 016986 361 MVICSSISLILEAF 374 (379)
Q Consensus 361 ~~i~~~~~~~~~~~ 374 (379)
..++..++...++.
T Consensus 289 ~~~~~~~~~~~~~~ 302 (399)
T PRK05122 289 EILGLLLLWLAPSP 302 (399)
T ss_pred HHHHHHHHHHhccH
Confidence 77776666555443
No 53
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=1.1e-28 Score=231.78 Aligned_cols=305 Identities=15% Similarity=0.141 Sum_probs=227.1
Q ss_pred HHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
+...+..+......+..+..++.++++|+++..+. |++.+.+.++++++.++.+++.||+|||+++.++.++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~--G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS--GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc--eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 33444556666677888899999999999998887 9999999999999999999999999999999999999999999
Q ss_pred HHhccc---------------------------------------------------chHHHHHHHHHHHhhhchhhHHH
Q 016986 134 ISATTR---------------------------------------------------NLIGMLLGRFVVGTGMGLGPTVA 162 (379)
Q Consensus 134 ~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~ 162 (379)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 987653 24567789999999999999999
Q ss_pred HHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc---------------------hhhHHHHHHHHHHHHHH
Q 016986 163 ALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------------------GWWRICFWVSIVPAAIL 221 (379)
Q Consensus 163 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~ 221 (379)
.+++.|++|+++|++++++++.+..+|.++|+++++.+.+.. |.||..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998877532 12777888888777776
Q ss_pred HHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHH
Q 016986 222 CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (379)
Q Consensus 222 ~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
.+.++++|++.+....+.+.+..++. ......+. .. .............+++++++|.++...+..++.....
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~~~~~~--~~---~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~ 346 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHETE--KLEKSEDK--SR---KKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAF 346 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhhh--cccccccc--cc---hhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 66666677653210000000000000 00000000 00 0000000111245678999999999988888888888
Q ss_pred hhchhHHHHhHHHHHHHcCCChhHHHHHHHH-HHHHHHHHHHHHHHhhCc--hHHHHHHHHHHHHHHHH
Q 016986 302 LSGINAIFYFSSSVFKSAGLSSGLANVFVGI-ANLLGSVVAMVLMDKLGR--KALLQWSFFSMVICSSI 367 (379)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~--~~~~~~~~~~~~i~~~~ 367 (379)
+....++|.|+...++.+..+++.......+ +.++|.+++|+++||++. |+.+..+.++..+..++
T Consensus 347 ~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 347 NGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8888899999988888877777777766665 568999999999999874 56666666555555433
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=2.6e-27 Score=212.24 Aligned_cols=280 Identities=15% Similarity=0.109 Sum_probs=204.2
Q ss_pred HHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH-HhHHHHHHHHHH
Q 016986 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL-CALPMIIGASIS 135 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~-~~~~~~~~~~~~ 135 (379)
+.+++..+......+.+|. +++++|.+..+. |++.+++.++..+.+++.|+++||+|||+.++. +.....++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMI--GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 3456667777777788886 578899987776 999999999999999999999999999887654 666667778888
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhH--HHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTY--GAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
+++++++.+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|.+++|.+++.+.+..+ ||+.|++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~ 160 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLT 160 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHH
Confidence 9999999999999999988888888888899999887777754 577888889999999999999988888 9999999
Q ss_pred HHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHH
Q 016986 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (379)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
.++..++..+.. +++||+|+.. +.++ ...+.++.+++++++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~------------------------------~~~~~~~~~~~~~~~~~~~ 206 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYPRGA----PGAL------------------------------TRLEVRGLLASRDTRLLFV 206 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcccCc----cccc------------------------------CcchhhhhhcCcchHHHHH
Confidence 887766655544 4578765311 0000 0011233556666665555
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
..++............+.|..+.++.+..+.+.......+..+++.++.|++.||+++|+.+.++.+...+....+...+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 207 ACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 44444433333344556666555555555566666666667788889999999999999988877666555554444444
Q ss_pred Hh
Q 016986 373 AF 374 (379)
Q Consensus 373 ~~ 374 (379)
+.
T Consensus 287 ~~ 288 (375)
T TIGR00899 287 SL 288 (375)
T ss_pred HH
Confidence 33
No 55
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=5.7e-29 Score=223.20 Aligned_cols=276 Identities=16% Similarity=0.107 Sum_probs=211.3
Q ss_pred HHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc
Q 016986 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (379)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 138 (379)
+++...++....++..|.+.+++|.+.++. +++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDL--GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHH--HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 345666777888889999999999988777 999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH-hhcccccccchhhHHHHHHHHHH
Q 016986 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL-LIGIPVKEIAGWWRICFWVSIVP 217 (379)
Q Consensus 139 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~wr~~f~~~~~~ 217 (379)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+ ||+.|++.++.
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 159 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGII 159 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 56666666667 99999987766
Q ss_pred HHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHH
Q 016986 218 AAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (379)
Q Consensus 218 ~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
.++..+ ..++.+|+|+....++..++..+ +.+. +.++.++.........+++++++.++...+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMPNE---------EPDG---DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVF 227 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCccc---------cccc---ccccccccccchHHHHHHHHhcchHHHHHHHHHH
Confidence 655444 44556766532110000000000 0000 0000001111222345677888888877777666
Q ss_pred HHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhC
Q 016986 297 FALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLG 349 (379)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 349 (379)
..........+.+.|..+.++.+..+.+.......++.+++.++.+++.||..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~ 280 (379)
T TIGR00881 228 VYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHc
Confidence 66666666667777776666666666778888889999999999999999863
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=2.6e-27 Score=213.01 Aligned_cols=284 Identities=14% Similarity=0.138 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 132 (379)
+..++...+..++..+..++.+|.+++++|++..+. |++.+.+.+++.+++++.|++.||+|||++++.+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~--g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA--ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 445666777778888888999999999999987776 999999999999999999999999999999999999999998
Q ss_pred HHHhc---ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc-----
Q 016986 133 SISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA----- 204 (379)
Q Consensus 133 ~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----- 204 (379)
+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..++|.+++.+....
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88543 4689999999999999999999999999999999999999999999999999999999987664221
Q ss_pred --------------------hhhHHHHHHHHHHHHHHHHHHhh--cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHH
Q 016986 205 --------------------GWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLA 262 (379)
Q Consensus 205 --------------------~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (379)
.+||++|++.+++.++..+...+ .||.++ + ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~--~~------------------- 216 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S--DA------------------- 216 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c--cc-------------------
Confidence 12999998877766655444433 332110 0 00
Q ss_pred HHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCCh---hHHHHHHHHHHHHHHH
Q 016986 263 ELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSV 339 (379)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 339 (379)
.+.....+.++++++|.++...+..+++.....+..++++.|..+. ..+.+. +........+..+|++
T Consensus 217 -------~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~--~~~~~~~~a~~~~~~~~~~~~vGR~ 287 (410)
T TIGR00885 217 -------KQISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL--IPGMTAGFAANYNIGAMVIFFISRF 287 (410)
T ss_pred -------ccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000112345677888888777777776666655555555554321 112222 2344455577889999
Q ss_pred HHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH
Q 016986 340 VAMVLMDKLGRKALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 340 ~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
+++++.||+++|+.+.++.....+.+++....+.
T Consensus 288 ~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~ 321 (410)
T TIGR00885 288 IGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGG 321 (410)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999988888887777776666433
No 57
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=1.6e-27 Score=217.36 Aligned_cols=286 Identities=13% Similarity=0.063 Sum_probs=207.2
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
++..+....+................|.+++ .|++.++. +++.+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL--GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh--HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3555556666666666666666677787775 58887776 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhcc----cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc-c
Q 016986 129 IIGASISATT----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-I 203 (379)
Q Consensus 129 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~ 203 (379)
+++.++.++. ++++.+.+.|++.|++.+...+.....+.|++|+++|++++++++.+..+|..+++.+.+.... .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9998887764 5677888899999999999988888999999999999999999999999999888877665433 4
Q ss_pred chhhHHHHHHHHHHHHHHH-HHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCC-Ccchhhhh
Q 016986 204 AGWWRICFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDG-DIVKFEEL 281 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 281 (379)
.+ ||+.|++.++..++.. +..+++||+|+.... ++.++.++ +.. .+. .+.++.+.+ +....+..
T Consensus 182 ~~-w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~---~~~-------~~~~~~~~~~~~~~~~~~ 247 (438)
T TIGR00712 182 ND-WHAALYFPAICAIIVALFAFAMMRDTPQSCGL-PPIEEYRN--DYP---DDY-------NEKAEQELTAKEIFMQYV 247 (438)
T ss_pred hh-hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC-CCchhccc--ccc---ccc-------ccccccccchHHHHHHHH
Confidence 45 9999999777766654 445567887653110 00000000 000 000 000000000 01112346
Q ss_pred hcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 016986 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 351 (379)
++++.++...+..++.....+....+.|.|+.+..+.+...++....+..++.+++.+++|+++||++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 248 LPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7888888877766666666566667778887776666666677888888999999999999999999643
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=6e-27 Score=211.10 Aligned_cols=267 Identities=13% Similarity=0.153 Sum_probs=204.4
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
.++.+.+......+..+......+.+|.+.+++|.+..+. +++.+++.++..++++++|+++||+|||++++.+.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAV--QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 4555656666666666777777889999999999988777 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
.++.+++.++++++.+++.|++.|++.+...+....+..|.+++++|+++.++.+.+..+|..++|.+++.+.+..+ ||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~ 162 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WR 162 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 99999999999999999999999999988888888899999999999999999999999999999999999888777 99
Q ss_pred HHHHHHHHHHHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 209 ICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
+.|++.++..++..+ ..++.||+++. +++++. ...++++.++++.+
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----------------------------~~~~~~~~~~~~~~ 209 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPA----DARRTR-----------------------------VLASYRTLLSNRRF 209 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCcc----ccchhH-----------------------------HHHHHHHHHcChHH
Confidence 999987766554433 34556776421 100000 11234556777777
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 351 (379)
+...+..+.............+.+..+.++.++.+.+.......++.+++..+.+++.||.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 273 (394)
T PRK11652 210 NCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL 273 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655444443333323233344455554454444556667777788888888899999988743
No 59
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=7.3e-27 Score=217.75 Aligned_cols=285 Identities=22% Similarity=0.191 Sum_probs=216.5
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchh
Q 016986 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLG 158 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 158 (379)
+.+..+.... .+..+++++|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|+++|++.++.
T Consensus 111 ~~~c~~~~~~--~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLV--ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHH--HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence 3444433333 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHc
Q 016986 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKK 238 (379)
Q Consensus 159 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 238 (379)
......+++|++++++|+.+..+ ......+..+++..++++.+ + ||+.+++..++.++.++..++.||+|+|+..+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 99999999999999999999999 77777777777777777776 4 99999999999888877766677999999999
Q ss_pred CChHHHHHHHHHHhCCC----chhHHHHHH--Hhh-hcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHh
Q 016986 239 GRTAEAEAEFEKLLGGS----HVKSSLAEL--SKL-DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 311 (379)
Q Consensus 239 ~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (379)
++.+++.+.+++....+ ......+.. .+. ......+...+.++++.+..+...+...+..+.....+..+
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl--- 341 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGL--- 341 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhh---
Confidence 99999888888765432 111111111 111 11112233557888888765544444333332211111111
Q ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH
Q 016986 312 SSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
.......+.+........+.....+....+...|+.|||.....+..+..++++...+...
T Consensus 342 -~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~ 402 (521)
T KOG0255|consen 342 -SLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPD 402 (521)
T ss_pred -hhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1112234445566777777788888889999999999999999999999999888877654
No 60
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=1.6e-26 Score=208.23 Aligned_cols=276 Identities=16% Similarity=0.137 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 131 (379)
+..+.++.++.....+...+.+|. +.+|+|.+..+. |++.+++.+++.++++++|+++||+|||++++.+.+...++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~--g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMV--GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 334445556666666777788885 578999987777 99999999999999999999999999999999998877766
Q ss_pred HHHH---hc-----ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 132 ASIS---AT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 132 ~~~~---~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
.+.. +. .++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..++|.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5432 22 357889999999999999999998999999999999999999999999999999999999998888
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhc
Q 016986 204 AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLY 283 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (379)
.+ ||+.+.+..+..++........||+++ ++++ +.+.++.++
T Consensus 175 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-------------------------------~~~~~~~~~ 216 (392)
T PRK12382 175 FG-FAALALTTMVLPLLAWAFNGTVRKVPA------HAGE-------------------------------RPSLWSVVG 216 (392)
T ss_pred cC-hHHHHHHHHHHHHHHHHHHHhccCCCC------Cccc-------------------------------CchHHHHHH
Confidence 88 998877654443333222222233211 0000 000111111
Q ss_pred ccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 016986 284 GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL-SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMV 362 (379)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 362 (379)
..+...+...+..........+.+.|+.+ .+. ..+......+++.+++.++.|++.||+++|+.+..+..+..
T Consensus 217 --~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 290 (392)
T PRK12382 217 --LIWKPGLGLALQGVGFAVIGTFVSLYFAS----KGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVET 290 (392)
T ss_pred --HHHHhHHHHHHHHHHHhHHHHHHHHHHHh----cCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHH
Confidence 11111111112222222223334444432 222 34556666778888999999999999999998888887777
Q ss_pred HHHHHHHHHHHh
Q 016986 363 ICSSISLILEAF 374 (379)
Q Consensus 363 i~~~~~~~~~~~ 374 (379)
++.+++...++.
T Consensus 291 ~~~~~~~~~~~~ 302 (392)
T PRK12382 291 VGLLLLWLAPTA 302 (392)
T ss_pred HHHHHHHHcccH
Confidence 777666554443
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=1e-26 Score=206.66 Aligned_cols=267 Identities=14% Similarity=0.128 Sum_probs=201.1
Q ss_pred hhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHH
Q 016986 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (379)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 144 (379)
......++.+|.+.+++|++.++. +++.+++.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++++.+
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l 90 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVA--GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALL 90 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHH
Confidence 334567899999999999988777 999999999999999999999999999999999999888888777 78899999
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh-hHHHHHHHHHHHHHHHH
Q 016986 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCL 223 (379)
Q Consensus 145 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-wr~~f~~~~~~~~~~~~ 223 (379)
++.|++.|++.+...+....++.|++| ++|++++++++.+..+|..+++.+++.+.+..+. ||+.|.+.++..++..
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~- 168 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL- 168 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-
Confidence 999999999999888888888999986 6899999999999999999999998888766543 9999877655433322
Q ss_pred HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhh
Q 016986 224 AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLS 303 (379)
Q Consensus 224 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
..++|+.++ +++ + .+.......++.+|++.++...+...+.....+.
T Consensus 169 -~~~~~~~~~----~~~--~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (355)
T TIGR00896 169 -LAWIPQVRR----RVA--A--------------------------NQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYS 215 (355)
T ss_pred -HHHhhhhcc----ccC--C--------------------------CCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHH
Confidence 223343311 000 0 0000112345677888777665555555555555
Q ss_pred chhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHH
Q 016986 304 GINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLG-RKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~i~~~~~~~ 370 (379)
...+.|.|+.+ .+.+..+.+.......++.++++++.|++.||++ ||+.+..+..+..++.+.+.+
T Consensus 216 ~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T TIGR00896 216 LIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF 282 (355)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 55667777654 3444445678888899999999999999999994 566666666666666554444
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=2.8e-26 Score=206.95 Aligned_cols=271 Identities=13% Similarity=-0.007 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 132 (379)
+....++.++...........++.+.+|+|.+.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++.++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQS--ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHh--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 334444444444444444556677778999987777 999999999999999999999999999999999999998887
Q ss_pred HHH---hc-ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHH-HHHHhhcccccccchhh
Q 016986 133 SIS---AT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWW 207 (379)
Q Consensus 133 ~~~---~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~w 207 (379)
+++ ++ .++++.+++.|+++|++.+...+....++.|++|+++|++++|+.+.+.++|. .++|.+++.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~ 171 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-E 171 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-h
Confidence 654 33 35788889999999999988888888889999999999999999999999996 689999988887777 5
Q ss_pred HHHHHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccc
Q 016986 208 RICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (379)
Q Consensus 208 r~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (379)
+..++.......+..+. .++.++.++.. ++++++ +..+....+++++++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------------------------~~~~~~~~~~~~~~~~~ 223 (402)
T TIGR00897 172 MNTLWSALAFVLTGGVIALFSNKDIFTPQ--HMQTRE--------------------------KFSELGKAATILFTNPN 223 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCcc--cccCCc--------------------------chhhHHHHHHHHHcChh
Confidence 55555433332222222 23334332100 000000 00000123556788888
Q ss_pred hhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHH
Q 016986 287 FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQ 355 (379)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 355 (379)
++...+..++.....+....+.|.|..+ ++.+..+.+.......++..++.++.|+++||++||+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 291 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR 291 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 8877666666555555556667766644 4544455567777788999999999999999999887653
No 63
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.1e-26 Score=191.13 Aligned_cols=320 Identities=19% Similarity=0.208 Sum_probs=241.3
Q ss_pred cchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHh
Q 016986 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (379)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~ 125 (379)
-+.+|.......++...+.+.....+-+.|.+.+.+|++..+. +++....+++..+++..+|.++|++|||+.+....
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~--~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQA--PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhh--hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 3456777777888877777776667778888899999765555 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
...++..++.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....+........|
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999 888889999999999999877777 8899999999999888888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCch-----------hHHHH-H---HHhh-hc
Q 016986 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHV-----------KSSLA-E---LSKL-DR 269 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~---~~~~-~~ 269 (379)
|||.......+..+.++..+++||+|++...+++.+++...++++...+.. .++.+ + ..+. .+
T Consensus 229 -wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~ 307 (528)
T KOG0253|consen 229 -WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSS 307 (528)
T ss_pred -HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhc
Confidence 999998888888888888889999999999999999998888887544421 11111 1 1111 11
Q ss_pred CCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC---------------------C---hhH
Q 016986 270 GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---------------------S---SGL 325 (379)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~---~~~ 325 (379)
..++...+...++..+-.+..+..-...+..-+..+. ........++ .+. . ...
T Consensus 308 a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg-~VLlttelfq-sgd~c~~~~r~~p~e~e~~~~c~~s~~~dYr 385 (528)
T KOG0253|consen 308 AAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYG-SVLLTTELFQ-SGDACPLYNRFLPTELETRANCPLSVAKDYR 385 (528)
T ss_pred cccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHh-ccCccccchhcchhHHHhhhcCCccchhHHH
Confidence 2233345566666544444333332222222222221 1111112111 111 0 113
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 326 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
-.....+....|.++.+++.||+|||+.+...++++.++.+++....
T Consensus 386 dllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~ 432 (528)
T KOG0253|consen 386 DLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK 432 (528)
T ss_pred HHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc
Confidence 45566788999999999999999999999999999999888776653
No 64
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=6.7e-26 Score=205.46 Aligned_cols=287 Identities=19% Similarity=0.156 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchh---HHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL---AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
...++++.++..+......+.+|.+.+++|.+..+. ..+++.+++.++..++++++|+++||+|||++++.+.+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 334556667777777778899999999999886543 24788999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHH
Q 016986 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (379)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~ 209 (379)
++.++++++++++.+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..++|.+++.+.+..+ ||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~ 173 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRP 173 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHH
Confidence 999999999999999999999999765 557778899999999999999999999999999999999999888777 999
Q ss_pred HHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchh
Q 016986 210 CFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (379)
Q Consensus 210 ~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (379)
.|++.++..++..+.. ++.+|+++. .++.++ .+ ..+..+.++++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~----------------------------~~~~~~~~~~~~~~ 221 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQP---VSKKEM-LH----------------------------MREVVTSLKNPKLV 221 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccc---ccchhh-hH----------------------------HHHHHHhCcCCchH
Confidence 9998777666554443 445554311 000000 00 00112334555544
Q ss_pred HHHH-HHHHHHHHHhhchhHHHHhHHHHHHHcCC---ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Q 016986 289 VVFI-GSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVIC 364 (379)
Q Consensus 289 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~ 364 (379)
.... ...+............+.|..+..+.... ..+......+++.+++.+..|++.||++||+.+..+.....++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 301 (408)
T PRK09874 222 LSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHH
Confidence 3222 22222222222233444454443221111 1234555667788889999999999999999888887777666
Q ss_pred HHHHHHHHH
Q 016986 365 SSISLILEA 373 (379)
Q Consensus 365 ~~~~~~~~~ 373 (379)
.+.....++
T Consensus 302 ~~~~~~~~~ 310 (408)
T PRK09874 302 LIPMSFVQT 310 (408)
T ss_pred HHHHHHhcc
Confidence 655554443
No 65
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=9.4e-27 Score=212.74 Aligned_cols=286 Identities=13% Similarity=0.102 Sum_probs=203.0
Q ss_pred hHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
+|..+..++............++...|.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET--AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH--HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4666666666655555555667888999999999988877 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccchHHHHH-HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhh
Q 016986 129 IIGASISATTRNLIGMLL-GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (379)
++++++++++++++.+++ .|+++|++.+...+....++.++++ ++|+++.++.+.+..+|..++|.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-w 172 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-W 172 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-h
Confidence 999999999999998875 5799999998877777788899996 789999999999999999999999998888888 9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
|+.|++.++..++..+..+++.+.+... +..+.++.. .......... .......+...+....+++++|.+
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQ-RVSKSKSKE----GLPPDGSTKK----LSKKSTAEKINRFLDFSLFTHRGF 243 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccc-ccccccccc----cCCCCCcccc----ccccchhhhhhhhcchHHhcCchH
Confidence 9999998877666555444433221100 000000000 0000000000 000000000001111257788888
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (379)
+......++.....+....+++.|..+ .+....+.+......+++.++++++.|++.||.
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 877766666666555555666666644 344445567788888999999999999999973
No 66
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=7.4e-27 Score=209.60 Aligned_cols=277 Identities=18% Similarity=0.204 Sum_probs=224.0
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc--chHHHHHHHHHHHhhh
Q 016986 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGM 155 (379)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~ 155 (379)
..+++.+.++. +++.+.++.|+.+++++.|++.||+|-|+++..+.++.++++++...+. +++.+++.|++||++.
T Consensus 65 ~~~~~ws~~~k--~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEK--GLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred CceecCCHHHH--HHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 34566666655 9999999999999999999999999999999999999999999988775 4557788999999999
Q ss_pred chhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc-chhhHHHHHHHHHHHHHHHHHH-hhcCCChh
Q 016986 156 GLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWWRICFWVSIVPAAILCLAM-VFCAESPH 233 (379)
Q Consensus 156 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~ 233 (379)
|..+|....+.+.|.|++||++..++...+..+|.+++..++|.+.+. .| |++.|++.++.+++..+++ ++..|+|+
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999988 66 9999999998888877665 45667775
Q ss_pred HHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHH
Q 016986 234 WLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSS 313 (379)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
. ++.-.+++.+.+++.. ..+..++....+++++++++.+|...+..+......+....+.|.|+.
T Consensus 222 ~--h~~is~~El~~I~~~k-------------~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~ 286 (466)
T KOG2532|consen 222 K--HPNISEKELKYIEKGK-------------SEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLK 286 (466)
T ss_pred c--CCCCCHHHHHHHHhcc-------------cccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 2 1111222222221110 011111225778999999999999999999999999999999999999
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCc--------hH-HHHHHHHHHHHHHHHHHHHH
Q 016986 314 SVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGR--------KA-LLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~--------~~-~~~~~~~~~~i~~~~~~~~~ 372 (379)
++++..-.+.|+..++..+...+..+++|.++||..+ || .-.++....+++++.+.+.+
T Consensus 287 ~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 287 EVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 9999988889999999999999999999999998754 22 22355555555555544443
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=3.3e-26 Score=206.38 Aligned_cols=271 Identities=20% Similarity=0.173 Sum_probs=192.1
Q ss_pred HHHhhhhccccchhhhhhhhccCCcchhHHHHHHH--HH---HHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH
Q 016986 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVS--MC---LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (379)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s--~~---~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 135 (379)
+.+.++...++...+.+.+++..+.++...+.+.+ .+ .++..+++++.|+++||+|||++++.+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 45566777777777778777654222222233333 23 33445789999999999999999999999999999999
Q ss_pred hcccchH--------HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc------
Q 016986 136 ATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------ 201 (379)
Q Consensus 136 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------ 201 (379)
++++++. .+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999876 47889999999999999999999999999999999999999999999999988766543
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhh
Q 016986 202 --EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFE 279 (379)
Q Consensus 202 --~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (379)
+..+ ||+.|++.++..++..+.....+|++++..+++ +++....+.+
T Consensus 163 ~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~ 211 (394)
T TIGR00883 163 ALLEWG-WRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE------------------------------KHKKKRGPIR 211 (394)
T ss_pred Hhhccc-hHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh------------------------------ccccccCCHH
Confidence 2345 999999877766655555555676653211100 0011123455
Q ss_pred hhhcccc--hhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHH
Q 016986 280 ELLYGRH--FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (379)
Q Consensus 280 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 357 (379)
+.++++. ++......++..........+.+.|..+.++.+..+.+.......++.+++.++.|+++||++||+.+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 212 ETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIF 291 (394)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 5666554 44444444444444444445566666555555555567778888899999999999999999999877654
Q ss_pred HHHHH
Q 016986 358 FFSMV 362 (379)
Q Consensus 358 ~~~~~ 362 (379)
..+..
T Consensus 292 ~~~~~ 296 (394)
T TIGR00883 292 TVLAA 296 (394)
T ss_pred HHHHH
Confidence 44433
No 68
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=1.4e-32 Score=252.31 Aligned_cols=314 Identities=34% Similarity=0.614 Sum_probs=238.0
Q ss_pred HHHHHHHHhhhhccccchhhhhh--hhccCCc-------chhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 56 ATLSSFLFGYHLGVVNEPLESIS--LDLGFNG-------NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~-------~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
+.++.+..+++....+...+... .++..+. ++...+++.+...+|..+|++++|.++||+|||+.++.+.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 34555778888877766665554 2222222 12345899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccc---chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 127 PMIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 127 ~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
+..++.++.++++ |++.++++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+...
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999988887665432
Q ss_pred ch--hhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhh
Q 016986 204 AG--WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEEL 281 (379)
Q Consensus 204 ~~--~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (379)
.+ .||+.+.+.++++++..+..+++||+|+|+..+++.+++++.+++..+.+..+++.++..+..+...+....++++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDL 244 (451)
T ss_pred cccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeec
Confidence 22 3999999999888887777788999999999999999988888876555433333333322222222222667888
Q ss_pred hcccc-hhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChh-HHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016986 282 LYGRH-FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (379)
Q Consensus 282 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 359 (379)
++++. .+.......+.............+|.+...+..+.+.. .......+...++.+++.++.||+|||+++..+..
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~ 324 (451)
T PF00083_consen 245 FRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLL 324 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88765 33444444444444444545555666666655555444 44555667777888888899999999999988888
Q ss_pred HHHHHHHHHH
Q 016986 360 SMVICSSISL 369 (379)
Q Consensus 360 ~~~i~~~~~~ 369 (379)
.+.++.+.+.
T Consensus 325 ~~~~~~~~~~ 334 (451)
T PF00083_consen 325 LMAICSLILG 334 (451)
T ss_pred cccccccccc
Confidence 8777776654
No 69
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=2.1e-25 Score=202.90 Aligned_cols=307 Identities=21% Similarity=0.211 Sum_probs=210.0
Q ss_pred HHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc
Q 016986 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (379)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~ 139 (379)
....++.....+..++.+..|+|-++.. .|+.++..++.+++.++.|+++|.||||.+++.+.++..+|+++++.++
T Consensus 53 ~~~~~~~~~~~a~~l~~I~~diG~~~~~---~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~ 129 (599)
T PF06609_consen 53 VIAAYFVLVLPASILPYINADIGGSDNW---SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ 129 (599)
T ss_pred HHHHHHHHhccHHHHHHHHHhcCCCccc---hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC
Confidence 3334445555677889999999976544 5999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
|...++++..+.|+|.|.... ....++|..|.|.|....++...........++.++..+..+.+ |||.|++.++...
T Consensus 130 ~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~i~~~ 207 (599)
T PF06609_consen 130 NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFIIWSG 207 (599)
T ss_pred cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHHHHHH
Confidence 999999999999999877764 45669999999999988887777666666677777776666666 9999999888766
Q ss_pred HHHHHHhhcCCChhHHHHcCC---hHHHHHHHHHHh------------------CCC----chhHHH----------HHH
Q 016986 220 ILCLAMVFCAESPHWLYKKGR---TAEAEAEFEKLL------------------GGS----HVKSSL----------AEL 264 (379)
Q Consensus 220 ~~~~~~~~~~e~p~~~~~~~~---~~~~~~~~~~~~------------------~~~----~~~~~~----------~~~ 264 (379)
+.+++.+++..+|++...+++ ..+..+++|.+. +.. +..... ...
T Consensus 208 i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F 287 (599)
T PF06609_consen 208 IALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAF 287 (599)
T ss_pred HHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHH
Confidence 665544332222332222221 223333344321 000 000000 000
Q ss_pred HhhhcC-CCCCcchhhhhhcc-cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC---ChhHHHHHHHHHHHHHHH
Q 016986 265 SKLDRG-DDGDIVKFEELLYG-RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSV 339 (379)
Q Consensus 265 ~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 339 (379)
--.+.. ..+++.-..+++++ |.+...++..++....+++.....|.....+++.... ..++...+.+++..+|..
T Consensus 288 ~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~ 367 (599)
T PF06609_consen 288 VVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAV 367 (599)
T ss_pred HHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHH
Confidence 011111 11233344567877 4565556666666666666555666655555555443 356778888999999999
Q ss_pred HHHHHHHhhCch-HHHHHHHHHHHHHHHHHHHH
Q 016986 340 VAMVLMDKLGRK-ALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 340 ~~g~l~d~~g~~-~~~~~~~~~~~i~~~~~~~~ 371 (379)
+.|.+..+++|- +.++++..++.+++.++...
T Consensus 368 i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~ 400 (599)
T PF06609_consen 368 ILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV 400 (599)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc
Confidence 999999988774 45556776766665555443
No 70
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=6.7e-27 Score=212.28 Aligned_cols=284 Identities=16% Similarity=0.116 Sum_probs=210.2
Q ss_pred HHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh-
Q 016986 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA- 136 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~- 136 (379)
...++..+......+.+|.+.++++.+..+. |++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQMMTGSTLQV--GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 3344555556666778899988888765555 9999999999999999999999999999999998887777665543
Q ss_pred ----cccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHH
Q 016986 137 ----TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (379)
Q Consensus 137 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~ 212 (379)
..++++.+++.|+++|++.+...+...+++.|+.|+++|+++.++...+..+|..+||.+++.+.+..+ |++.|+
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~ 180 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYG 180 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHH
Confidence 257889999999999999988888889999999999999999999999999999999999999888777 999999
Q ss_pred HHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHH
Q 016986 213 VSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (379)
Q Consensus 213 ~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
+.++..++..+..+.+|++++. +++.++..+ +....++..+++|.++...+
T Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~ 231 (417)
T PRK10489 181 LAAAGTFITLLPLLRLPALPPP---PQPREHPLR--------------------------SLLAGFRFLLASPVVGGIAL 231 (417)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC---CcccccchH--------------------------HHHHHHHHHHcChHHHHHHH
Confidence 8777766666666667765421 000000000 00112445567776665554
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
..++... ......+.+.|..+.++.+....+.......++.+++.++.+++.||.++++.+..+.++..++.+++...+
T Consensus 232 ~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 310 (417)
T PRK10489 232 LGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP 310 (417)
T ss_pred HHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc
Confidence 4433322 233344566666665565555677888888999999999999999997777777777766666666555444
Q ss_pred Hh
Q 016986 373 AF 374 (379)
Q Consensus 373 ~~ 374 (379)
+.
T Consensus 311 ~~ 312 (417)
T PRK10489 311 MW 312 (417)
T ss_pred hH
Confidence 43
No 71
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=6.3e-28 Score=202.41 Aligned_cols=260 Identities=15% Similarity=0.086 Sum_probs=212.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHH
Q 016986 83 FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVA 162 (379)
Q Consensus 83 ~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 162 (379)
...++.+.|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++.+...++++++.++++.++++|.+||+|.+...+..
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 33445556999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC-CcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCCh
Q 016986 163 ALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRT 241 (379)
Q Consensus 163 ~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~ 241 (379)
.++++|.+|+ ++|++++|+...+.++|.++||.+||.+.+..| .+.+|++.++..++...+.+++-|..+ .+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~~-----~~- 253 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPTE-----MD- 253 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCccc-----cC-
Confidence 9999999986 558999999999999999999999999999999 899999998888887777666544311 10
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC
Q 016986 242 AEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL 321 (379)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (379)
+.+..+..+++++++++..+...................++.|..+.+...+.
T Consensus 254 ---------------------------~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 254 ---------------------------PDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred ---------------------------ccccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 01223345678889999888776665555555555566777777776666666
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhC--chHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016986 322 SSGLANVFVGIANLLGSVVAMVLMDKLG--RKALLQWSFFSMVICSSISLILEAFLV 376 (379)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~i~~~~~~~~~~~~~ 376 (379)
+.|+.+....+..+++..+.|.+.||++ |......+.+..++++....+.+++..
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~ 363 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQ 363 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHH
Confidence 8899999999999999999999999999 544455666666666666666555543
No 72
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=7e-26 Score=201.02 Aligned_cols=261 Identities=26% Similarity=0.412 Sum_probs=217.0
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
.+.+..+...++.....+..|.+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||+.+..+.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQA--GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 3455667777788888899999999998877766 89999999999999999999999999999999999999999999
Q ss_pred HhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Q 016986 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (379)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~ 214 (379)
..++++++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+..+ ||+.|++.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLIL 159 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888 99999988
Q ss_pred HHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHH
Q 016986 215 IVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGS 294 (379)
Q Consensus 215 ~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (379)
++..++..+...+++ |.++...+..
T Consensus 160 ~~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~ 184 (352)
T cd06174 160 AILGLLLALLLLFLL-------------------------------------------------------RLLLLLALAF 184 (352)
T ss_pred HHHHHHHHHHHHHHH-------------------------------------------------------HHHHHHHHHH
Confidence 777766655544332 2233334444
Q ss_pred HHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchH-HHHHHHHHHHHHHHHHHHHHH
Q 016986 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKA-LLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~i~~~~~~~~~~ 373 (379)
++............+.+..+.++.+..+.+.......++.+++.++.+++.||+++|+ .+..+..+..++.+.+...++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444444444555555555444444555678888999999999999999999999999 888888888888877776554
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=2e-25 Score=200.00 Aligned_cols=284 Identities=11% Similarity=0.021 Sum_probs=215.5
Q ss_pred HHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHH----HHHhHHHHHH
Q 016986 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF----QLCALPMIIG 131 (379)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l----~~~~~~~~~~ 131 (379)
+.+..+......+...|++|.+.+++|.+..+. |++.+++.++..++++++|+++||+|||+.. ..+..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i--g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI--GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 445566666667788899999999999987777 9999999999999999999999999985433 222222222
Q ss_pred HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHH
Q 016986 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (379)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f 211 (379)
..+..+++++.+++.|+++|.+.+...|...++..|+ +++|+++.+......++|.+++|.+++.+.+..| ||..|
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f 161 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNIL 161 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHH
Confidence 2445788999999999999999988889988887665 4778999999999999999999999999999888 99999
Q ss_pred HHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHH
Q 016986 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (379)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (379)
++.+...++.+ ..+.++|+++ ++++++ +++.....+.++++|+|+++...
T Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~----~~~~~~-------------------------~~~~~~~~~~~~~l~~~~~~~~l 211 (382)
T TIGR00902 162 AILTAGLAFML-IGFLIKPTIP----PKDAIP-------------------------EDESQGDSAFIALLKNPMNLRFL 211 (382)
T ss_pred HHHHHHHHHHH-HHHHcCCCCC----CCcccc-------------------------ccccccchhHHHHHcChHHHHHH
Confidence 88655433332 2333444321 110000 00011123467889999999888
Q ss_pred HHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
+..++..........+.+.|..+ .+.+....|.......++.+++.+..+++.||+++|+.+.++.+.+.+...++.+.
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 87777777777777777777755 45555567778888889999999999999999999999999999999998888877
Q ss_pred HHhhhh
Q 016986 372 EAFLVL 377 (379)
Q Consensus 372 ~~~~~~ 377 (379)
++.+.+
T Consensus 291 ~~~~~~ 296 (382)
T TIGR00902 291 EAFPLI 296 (382)
T ss_pred hhHHHH
Confidence 776543
No 74
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=7.6e-25 Score=197.09 Aligned_cols=280 Identities=12% Similarity=0.048 Sum_probs=199.8
Q ss_pred HHHHHHHhhhhccccchhh-hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH
Q 016986 57 TLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (379)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 135 (379)
....++.........++++ .+.+++|.+..+. |++.+.+.+...+.+++.|+++||+|||++++.+.++..++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMV--GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3444555555444455555 4678889887766 999999999999999999999999999999999999999999999
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHH
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~ 215 (379)
+++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+||.+++.+. ..+ ||+.|++.+
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~ 171 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGA 171 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHH
Confidence 999999999999999999998888999999999999999999999999999999999999999998 556 999999877
Q ss_pred HHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHH
Q 016986 216 VPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGS 294 (379)
Q Consensus 216 ~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (379)
+..++..+. .++.||.+. .+.++ +...+++++++++.++...+..
T Consensus 172 ~~~~~~~i~~~~~~~~~~~-----~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
T PRK11646 172 VLFVLAAAFNAWLLPAYKL-----STVRT-----------------------------PVREGMTRVLRDKRFVTYVLTL 217 (400)
T ss_pred HHHHHHHHHHHHhCCcccc-----cccch-----------------------------hhHHHHHHHHcCchHHHHHHHH
Confidence 666555443 344554210 00000 0112355677777776544433
Q ss_pred HHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH-hhCchHHHHHHHHHHHHHHHHHHHHHH
Q 016986 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
+.............|.|..+..+ .+...+......+++...+....+++.| |++.++.+..+..+..++.+++...++
T Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~ 296 (400)
T PRK11646 218 TGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN 296 (400)
T ss_pred HHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh
Confidence 33332222233455666655433 3344566666666666655555555555 566566666777777777666655554
Q ss_pred hh
Q 016986 374 FL 375 (379)
Q Consensus 374 ~~ 375 (379)
.+
T Consensus 297 ~~ 298 (400)
T PRK11646 297 LQ 298 (400)
T ss_pred HH
Confidence 43
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=1.3e-24 Score=200.04 Aligned_cols=279 Identities=15% Similarity=0.149 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----hhHHH-HHHHhH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCAL 126 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~-----Grr~~-l~~~~~ 126 (379)
...+++..+..+......++.+|...++.|.+.++. +.+ +.....+ ++.+++|+++||+ |||+. ++.+.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 334444455566666677788898989989887776 654 3333443 6899999999999 99885 667777
Q ss_pred HHHHHHHHHhcc---cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc-
Q 016986 127 PMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE- 202 (379)
Q Consensus 127 ~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 202 (379)
..+++.++.++. ++++.+.+.+++.|++.+...+...++..|++|+++|+++.++...+..+|.++++.++..+.+
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777777665 4788899999999999999999999999999999999999999999999999999999998888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhh
Q 016986 203 IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (379)
Q Consensus 203 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (379)
..| ||..|++.++..++..+..++.||+++. ++++++.. +....++++++
T Consensus 170 ~~G-Wr~~f~i~a~l~ll~~l~~~~~~e~~~~---~~~~~~~~--------------------------~~~~~~l~~~~ 219 (491)
T PRK11010 170 YLG-WQGMYWLMAALLIPCIIATLLAPEPTDT---IPVPKTLE--------------------------QAVVAPLRDFF 219 (491)
T ss_pred ccC-HHHHHHHHHHHHHHHHHHHHhcCCCccc---cccccchh--------------------------hhHHHHHHHHH
Confidence 456 9999999887776666655567776421 00000000 00112456677
Q ss_pred cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHH-HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 016986 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLAN-VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (379)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 361 (379)
+++..+......+++.........+.+.|+.+..+.+..+.+... ....++.+++.+++|+++||+++|+.+.++.++.
T Consensus 220 ~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~ 299 (491)
T PRK11010 220 GRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ 299 (491)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 777766655555554444444444555555444444444455655 3455789999999999999999988777665544
Q ss_pred HHHH
Q 016986 362 VICS 365 (379)
Q Consensus 362 ~i~~ 365 (379)
++..
T Consensus 300 ~l~~ 303 (491)
T PRK11010 300 GVSN 303 (491)
T ss_pred HHHH
Confidence 4433
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=8.8e-25 Score=195.94 Aligned_cols=279 Identities=12% Similarity=0.059 Sum_probs=204.6
Q ss_pred HHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhH----HHHHHHhHHHHHHHHHH
Q 016986 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR----RAFQLCALPMIIGASIS 135 (379)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr----~~l~~~~~~~~~~~~~~ 135 (379)
.+......+...|.+|.+.+|+|.+.++. |++.+++.++..++++++|+++||+||| +.+.++..+. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~i--G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETI--GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHH--HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 34444556777889999999999987777 9999999999999999999999999983 3333222222 22334
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHH
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~ 215 (379)
..+++++.+++.|++.|++.+...+...++..++ .++|+++.+......++|..+||.+++.+.++.| ||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHH
Confidence 4568999999999999999998888888887776 3568888899999999999999999999999888 999998876
Q ss_pred HHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHH
Q 016986 216 VPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (379)
Q Consensus 216 ~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (379)
+..++..+..++.||+++ ++++++ ..++...++++++|+|.++...+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~~--------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~ 215 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGESRQ--------------------------QESAGWPAWKALLKEPTVWRFLLCVS 215 (382)
T ss_pred HHHHHHHHHHHccCCCCC----cccccc--------------------------ccccccchHHHHHcChhHHHHHHHHH
Confidence 654444443344444311 100000 00112345788999999988777666
Q ss_pred HHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 296 LFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEAFL 375 (379)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 375 (379)
+............+.|..+ .+.+....|.......++.++..++.+++.||+++|+.+..+.+..++..+++...++.+
T Consensus 216 l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T PRK11128 216 LLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALP 294 (382)
T ss_pred HHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 6655555555566666643 344444466777777888888999999999999999999888888888777776666655
Q ss_pred h
Q 016986 376 V 376 (379)
Q Consensus 376 ~ 376 (379)
.
T Consensus 295 ~ 295 (382)
T PRK11128 295 W 295 (382)
T ss_pred H
Confidence 3
No 77
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=4.2e-25 Score=198.41 Aligned_cols=279 Identities=12% Similarity=0.055 Sum_probs=206.2
Q ss_pred HHHHHHHHHhhhhccccchhh-hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
.+....++.........+.+| .+.+++|++..+. |++.+++.++..+++++.|+++||+|||++++.+.++.+++.+
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLI--GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 333455555666666566665 4567899987777 9999999999999999999999999999999999999999999
Q ss_pred HHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
+.+++++++.++++|++.|.+.+...+....+..|..|+++|++++++.+...++|.+++|.+++.+.+ .+ |+..|++
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~ 166 (395)
T PRK10054 89 AIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWL 166 (395)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHH
Confidence 999999999999999999988888888899999999999999999999999999999999999998875 45 9999998
Q ss_pred HHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHH
Q 016986 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (379)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
.++..++.++.. +++||+++ +++.++ . +..+.++.+++|.++...+
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~~----~~~~~~-~----------------------------~~~~~~~~~~~~~~~~~~~ 213 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSEK----AIATET-G----------------------------SVWSPSVLLQDKALLWFTC 213 (395)
T ss_pred HHHHHHHHHHHHHHHHhcccc----ccccch-h----------------------------hhhhhhhhccCceehHHHH
Confidence 777766654433 44555421 000000 0 0011256778888887766
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHc--CCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 293 GSTLFALQQLSGINAIFYFSSSVFKSA--GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
..++..........+.+.|.....+.. ....+.......+..+......|++.||.++|+.+..+..+..++...+.+
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 293 (395)
T PRK10054 214 SGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF 293 (395)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHH
Confidence 666555554444445566655432211 112345555555666667788899999999999888888777777665554
No 78
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=5.8e-24 Score=191.30 Aligned_cols=273 Identities=13% Similarity=0.114 Sum_probs=179.4
Q ss_pred HHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHH-HHHHHHHhHHhhhccchhHHHH-HHHhHHHHHHH
Q 016986 56 ATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAF-QLCALPMIIGA 132 (379)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~d~~Grr~~l-~~~~~~~~~~~ 132 (379)
..+..++.........+.+|. +.+++|.+.++. |++.+...+ +..++.++.++ +||+|||+.+ +.+.+..+++.
T Consensus 20 ~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 20 FLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMV--GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHH
Confidence 334455666665656676665 578899987776 888776655 55555555555 9999999875 45666667778
Q ss_pred HHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcc--hhHHHHHHHHHHHHHHHHHhhcccccccchhhHHH
Q 016986 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR--GTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (379)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~ 210 (379)
++.+++++++.+++.+.+.|...+...|....++.|+.++++| +...++.+.+.++|.+++|.+++.+.++.| ||..
T Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~~ 175 (393)
T PRK15011 97 TLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTVM 175 (393)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHHH
Confidence 8888999999887766555544557788888888898876655 344578888999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcc-cchh
Q 016986 211 FWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG-RHFR 288 (379)
Q Consensus 211 f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 288 (379)
|++.++..++..+. .+++||+++ +++ ++ .+ ..+ .. .++ +..+
T Consensus 176 f~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~-~~-----------------------~~~----~~---~~~~~~~~ 219 (393)
T PRK15011 176 YLSAAVAFIVCGVMVWLFLPSMRK----ELP-LA-TG-----------------------TLE----AP---RRNRRDTL 219 (393)
T ss_pred HHHHHHHHHHHHHHHHhhcCccCC----CCc-cc-cc-----------------------ccc----cc---ccccccHH
Confidence 99887766655544 445777642 110 00 00 000 00 011 1222
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q 016986 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSIS 368 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~ 368 (379)
..................+.+.|..+.++.+..+.+.......++.+++.++.|+++||+++|+.+..+.....+....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK15011 220 LLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM 299 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 22222233333333333456666665555555556666666677788899999999999999988776655555444333
No 79
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=3.3e-24 Score=190.67 Aligned_cols=270 Identities=14% Similarity=0.080 Sum_probs=191.9
Q ss_pred ccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----hhHHH-HHHHhHHHHHHHHHHhcc---
Q 016986 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCALPMIIGASISATT--- 138 (379)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~-----Grr~~-l~~~~~~~~~~~~~~~~~--- 138 (379)
...++..|.+.+|+|++.++. |+..+. .+...+ .+++|+++||+ ||||. ++.+.+..++...+.++.
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~--g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTI--GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHH--HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 456778899999999998877 777655 444444 99999999998 89887 466777777777777777
Q ss_pred cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh-------hHHHH
Q 016986 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICF 211 (379)
Q Consensus 139 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-------wr~~f 211 (379)
.+.+.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+. ||..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 45666777788888888888999999999999999999999999999999999999999888766552 99999
Q ss_pred HHHHHHHHHHHHHHhh-cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccc---h
Q 016986 212 WVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH---F 287 (379)
Q Consensus 212 ~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 287 (379)
++.++..++..+..++ .||+++. ++..++..+. ....++++++++. .
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~ 211 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEPQED---ASVPKPLTQA--------------------------VLKPIREFFQRKNMIQA 211 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCCCcc---cccchhHHHH--------------------------HHHHHHHHHHhcCchHH
Confidence 9988777665555444 4554210 0000000000 0123456666665 4
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHH-HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSS 366 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~ 366 (379)
+...+..++............+.|..+ ++.+..+.+......+ ++.+++.+++|++.||+|+|+.+..+.++.++...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 212 LLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 444444444555555555667777655 4433333455554444 56789999999999999999988888877777666
Q ss_pred HHHHH
Q 016986 367 ISLIL 371 (379)
Q Consensus 367 ~~~~~ 371 (379)
++.+.
T Consensus 291 ~~~~~ 295 (356)
T TIGR00901 291 GFVWL 295 (356)
T ss_pred HHHHH
Confidence 55443
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=1.1e-24 Score=221.73 Aligned_cols=280 Identities=10% Similarity=-0.020 Sum_probs=205.6
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH---HhcccchHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SATTRNLIGMLLG 147 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~ 147 (379)
..+.+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++.+.++..++.++ +..+++++.++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 4455666677777766666689999999999999999999999999999999988766655544 3445789999999
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc--------chhhHHHHHHHHHH-H
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--------AGWWRICFWVSIVP-A 218 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~~~wr~~f~~~~~~-~ 218 (379)
|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.+++.+... .++|++.+.+..+. .
T Consensus 110 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVA 189 (1146)
T ss_pred HHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988765 33355555443333 3
Q ss_pred HHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHH
Q 016986 219 AILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFA 298 (379)
Q Consensus 219 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
++.++..+++||+|+....+.+.++ .. ........++.+++++.++...+..++..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (1146)
T PRK08633 190 VLGLIFAYRLPKVPAAAPEVFDKKK-YL-----------------------FPKLLWRNLKLLRSDRVLWLAIIGLSYFW 245 (1146)
T ss_pred HHHHHHHhcCcCCCCCCcccccccc-cc-----------------------cHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 3334444556776532111000000 00 00001123566778888887766666666
Q ss_pred HHHhhchhHHHHhHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHh
Q 016986 299 LQQLSGINAIFYFSSSVFKSAGL-SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEAF 374 (379)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 374 (379)
+.......+++.|+...++.+.. ..+++.....++.+++.++.+++.||+++++.+.++.++++++.+++.+..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1146)
T PRK08633 246 FISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSL 322 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhH
Confidence 55555566777777776666665 67788888999999999999999999998888877777777666666554443
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=2e-23 Score=188.44 Aligned_cols=274 Identities=17% Similarity=0.126 Sum_probs=196.6
Q ss_pred HHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----hhHH-HHHHHhHHHHHH
Q 016986 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRR-AFQLCALPMIIG 131 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~-----Grr~-~l~~~~~~~~~~ 131 (379)
..++..+...+.....+|.+.++.|++.+++ |++..+... .+..+++|+++||+ |||| .++.+.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i--g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTI--GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 3455666667777788999999999998888 888777665 59999999999999 8875 788888888888
Q ss_pred HHHHhcc---cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc-hhh
Q 016986 132 ASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA-GWW 207 (379)
Q Consensus 132 ~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~w 207 (379)
..+.++. ++++.+++..++.++..+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+.. + |
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w 160 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-W 160 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-H
Confidence 7777776 457778888888888888899999999999999999999999999999999999999888888753 6 9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
|..|++.++..++..+..++.||+++. +++.++..+ +...++++++++|.+
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~~~~--------------------------~~~~~~~~l~~~~~~ 211 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRSLGE--------------------------AVVGPLRDFFSRRGA 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc---ccccchhHH--------------------------HHHHHHHHHHhCcCH
Confidence 999999777766655555567765421 110000000 012246678899988
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHH-HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMVICS 365 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~ 365 (379)
+..++..++............+.++.+.++.+..+.+......+ ++.+++.++++++.||+++|+.+..+.....+..
T Consensus 212 ~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~ 290 (402)
T PRK11902 212 WALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSN 290 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 87766555554433322233333333333333333445544433 4578999999999999999888776665554443
No 82
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=6.8e-24 Score=185.74 Aligned_cols=300 Identities=12% Similarity=0.040 Sum_probs=197.4
Q ss_pred hccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHH
Q 016986 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (379)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 146 (379)
+...+...|.+.+|+|++.++. .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+
T Consensus 42 R~n~s~a~p~L~~elglT~~qv-~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETV-TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455778899999999998872 299999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH---HHHHHHHHHH
Q 016986 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV---SIVPAAILCL 223 (379)
Q Consensus 147 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~---~~~~~~~~~~ 223 (379)
.|++.|++.|+.. ....++..|+|+++|+++.++...+..+|.++++++++.+ ...| ||+.+.+ .....++.++
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~g-Wr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLG-WISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-chhHHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999984 4556 8876654 3333444555
Q ss_pred HHhhcCCChhHHHHcCChHHH---HHHHHHHhCCCchhHHHHHHHh-hhcCCCCCcchhhhhhcccchhHHHHHHHHHHH
Q 016986 224 AMVFCAESPHWLYKKGRTAEA---EAEFEKLLGGSHVKSSLAELSK-LDRGDDGDIVKFEELLYGRHFRVVFIGSTLFAL 299 (379)
Q Consensus 224 ~~~~~~e~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
..+++|..++-..-+++.+.. ....+....... ....+..+. ....-..-..++++..+|+......+.-.+..+
T Consensus 198 ~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~ 276 (511)
T TIGR00806 198 LALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG-GKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSA 276 (511)
T ss_pred HHHhCCCCchhhhhccccccccccccccccCCCCCc-cccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhh
Confidence 567788655433322221100 000000000000 000000000 000000112344556677765544443333333
Q ss_pred HHhhchhHHHHhHHHHHHHc-C---CChhHHHHHHHHHHHHHHHHHHHHHHhhCchH--HHHHHHHHHHHHHHHHHHHHH
Q 016986 300 QQLSGINAIFYFSSSVFKSA-G---LSSGLANVFVGIANLLGSVVAMVLMDKLGRKA--LLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~i~~~~~~~~~~ 373 (379)
. +.-+..|.+...+.. + .-.|..-++..+.+.+..+..|++-.++.+.. .+.+..++.+...+++...++
T Consensus 277 g----~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~ 352 (511)
T TIGR00806 277 G----YYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHD 352 (511)
T ss_pred H----HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccc
Confidence 3 333444555444332 1 13456677777778888899999866554432 333444444444455544444
Q ss_pred hh
Q 016986 374 FL 375 (379)
Q Consensus 374 ~~ 375 (379)
.|
T Consensus 353 Iw 354 (511)
T TIGR00806 353 IW 354 (511)
T ss_pred hH
Confidence 44
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.9e-23 Score=175.78 Aligned_cols=290 Identities=16% Similarity=0.199 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 131 (379)
.+..+....++.++......+.+|.+++.|+++..+. +++...++.++.+++++.|++.+|+|+|+.++.|+.+++++
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a--~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA--SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH--HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4445566667778888888999999999999998888 99999999999999999999999999999999999999999
Q ss_pred HHHH---hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc-----
Q 016986 132 ASIS---ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI----- 203 (379)
Q Consensus 132 ~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----- 203 (379)
+.++ +...++..++++-++.|.|.+...+....+++...++++-.+.+++.+..+++|.+++|++++.+...
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 9997 46789999999999999999999999999999999998889999999999999999999999988762
Q ss_pred -------------chhhHHHHHHHHHHHHHHHHHHhh--cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhh
Q 016986 204 -------------AGWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLD 268 (379)
Q Consensus 204 -------------~~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (379)
...|+++|...+...+++.+.... .|+.+. ++ +
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~--------~~------------------------~ 219 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV--------AA------------------------P 219 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc--------cc------------------------c
Confidence 112778888766666665555443 333211 00 0
Q ss_pred cCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 269 RGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (379)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (379)
+..+.+.....+++++|+++...++.+++.........+++.|+.+..+....++.........+.++|++++-++..|+
T Consensus 220 ~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~ 299 (422)
T COG0738 220 SLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI 299 (422)
T ss_pred cccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01111111577899999999999999999999888888888888776444555566888889999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 349 GRKALLQWSFFSMVICSSISLILEAFL 375 (379)
Q Consensus 349 g~~~~~~~~~~~~~i~~~~~~~~~~~~ 375 (379)
...+.+....+...+.++...+.++.+
T Consensus 300 ~~~k~Laf~a~~~ill~~~~~l~~g~v 326 (422)
T COG0738 300 KPEKYLAFYALIAILLLLAVALIGGVV 326 (422)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 998888877766666666665555543
No 84
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.1e-25 Score=190.61 Aligned_cols=322 Identities=19% Similarity=0.255 Sum_probs=217.1
Q ss_pred cchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhc-cCC-----cchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHH
Q 016986 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL-GFN-----GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (379)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~-----~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~ 119 (379)
.++..+.+.++.++.+.+.++...++.+.|.+...+ |-+ ...-..+.+..+..+|..+|++++|++.|++|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 345577888899999999999999999998876654 222 11222278899999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhccc-------chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 016986 120 AFQLCALPMIIGASISATTR-------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (379)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 192 (379)
++...++++.+++++++++. -+.++...|++.|+|.|+-+|...++.+|....+.||..++..-+..+.|.+.
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999887763 25678889999999999999999999999999999999988877767766666
Q ss_pred HHhhccccc----ccc----------hhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcC-ChHHHHHHHHHHhCCCch
Q 016986 193 SLLIGIPVK----EIA----------GWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKG-RTAEAEAEFEKLLGGSHV 257 (379)
Q Consensus 193 ~~~~~~~l~----~~~----------~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 257 (379)
|.+++-.+. ... +-||..|.+++++++..+...+.+||++++..... +.+.+.+..++....
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~--- 272 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV--- 272 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc---
Confidence 555543332 111 23999999999999988888888999998763222 222222211111111
Q ss_pred hHHHHHHHhhhcCCCCCc---chhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChh----------
Q 016986 258 KSSLAELSKLDRGDDGDI---VKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---------- 324 (379)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 324 (379)
..++.+..+...+.+. ..+...+..++. ..++......+..-........+...+++..+...+
T Consensus 273 --~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg-~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~v 349 (538)
T KOG0252|consen 273 --DIEAESTAESDVPPPSNSFGLFSRLFLRWHG-KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKV 349 (538)
T ss_pred --ccchhhccccCCCCcccccchHHHHHHHHHH-HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHH
Confidence 0000011111111111 123333333322 333344444444444444455556666653332211
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHH
Q 016986 325 --LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 325 --~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
....+..++.+.|..+...++|++||+++.+.+++++.+..+.+....+
T Consensus 350 A~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~ 400 (538)
T KOG0252|consen 350 AEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYN 400 (538)
T ss_pred HHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcc
Confidence 1222333444457777888999999999999999999998888765543
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.92 E-value=2.5e-23 Score=187.59 Aligned_cols=289 Identities=18% Similarity=0.129 Sum_probs=194.3
Q ss_pred HHHHHHHHHhhhhccccchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
.+....++.........+.+|.+ .+++|.+..+. |++.+++.++..++++++|+++||+|||+.++.++...+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDT--GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444555555566666777765 45689887777 9999999999999999999999999999999887766655443
Q ss_pred HH---hccc-----chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 134 IS---ATTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 134 ~~---~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
.. .+.+ .+...++.|++.|++.+...+....+..|..+ +++...+......++|.+++|.+++.+.+. +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSI-D 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhcc-C
Confidence 22 2221 23345667889999888888888777777533 345667777788889999999999987664 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh-cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcc
Q 016986 206 WWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG 284 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (379)
||+.|++.++..++..+..++ .+|+|+. ++.++.. ..+.++.+..+.++++|+
T Consensus 161 -~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------------~~~~~~~~~~~~~~~l~~ 214 (396)
T TIGR00882 161 -PQIVFWLGSGFALILMLLLMFAKPKAPSS----ATVANAL---------------------GANASAFSLKLALELFRQ 214 (396)
T ss_pred -chHHHHHHHHHHHHHHHHHHHhCCCCchh----hhhhccc---------------------ccccCCCCHHHHHHHHcC
Confidence 999999987777766555444 3443221 0000000 000111223456788999
Q ss_pred cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC---ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 016986 285 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 361 (379)
|.++...+..+...........+.+.|.+..++..+. ..+.......+...++.+..+++.||+++|+.+.++..+.
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~ 294 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIM 294 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 9887665554444333333334566676665432222 2456677777888889999999999999999988888877
Q ss_pred HHHHHHHHHHHHh
Q 016986 362 VICSSISLILEAF 374 (379)
Q Consensus 362 ~i~~~~~~~~~~~ 374 (379)
++...+....++.
T Consensus 295 ~l~~~~~~~~~~~ 307 (396)
T TIGR00882 295 SVRIIGSSFATTA 307 (396)
T ss_pred HHHHHHHHhcCCh
Confidence 7766654444433
No 86
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92 E-value=9.7e-24 Score=214.24 Aligned_cols=263 Identities=13% Similarity=0.071 Sum_probs=193.2
Q ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH---HhHHHHHHHHHHhcccchHHHHHHHHHHH
Q 016986 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL---CALPMIIGASISATTRNLIGMLLGRFVVG 152 (379)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 152 (379)
.+..+.+.+.. ...++..+++.+.++++++++|+++||+|||+++.. +.+...+..+.....+++++++++|+++|
T Consensus 41 ~~~~~~~~~~~-~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~g 119 (1140)
T PRK06814 41 GLSGALGAYNN-ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMG 119 (1140)
T ss_pred HhccccccchH-HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34444443322 234788999999999999999999999999997533 22233333333344589999999999999
Q ss_pred hhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCCh
Q 016986 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (379)
Q Consensus 153 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 232 (379)
++.+...|+..+++.|++|+++|++++++.+++..+|.++||.+++.+....+ |++.|+..++..++.+++.+++|+++
T Consensus 120 i~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 120 IHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999999999999999999999999999998888 99999555555555555556666653
Q ss_pred hHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhH
Q 016986 233 HWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS 312 (379)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (379)
.. ++..+......+ .....++.+.+++.++...+..++..+.......+++.|+
T Consensus 199 ~~---~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 252 (1140)
T PRK06814 199 NA---APDLKIDRNIIR-----------------------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLA 252 (1140)
T ss_pred CC---CCCCeeccchHH-----------------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 20 000000000000 0012466777888888888877777766666677888888
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Q 016986 313 SSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSS 366 (379)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~ 366 (379)
.+.++......+.+....+++.++|.++.|+++++..+++.+..+.++.+++.+
T Consensus 253 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 253 KETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGL 306 (1140)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHH
Confidence 877776666788899999999999999999999887766655555544444443
No 87
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=6.4e-23 Score=186.36 Aligned_cols=288 Identities=17% Similarity=0.105 Sum_probs=181.2
Q ss_pred HHHHHHhhhhccccchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH-
Q 016986 58 LSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS- 135 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~- 135 (379)
...++.....+...+.+|.. .+++|++..+. |++.+++.++..++++++|+++||+|||++++++..+.+++....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~--g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 94 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDT--GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFF 94 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 34444444444445666554 55599987777 999999999999999999999999999999988766655443321
Q ss_pred --hccc-----chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 136 --ATTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 136 --~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
..++ .....++.+++.|.+.....+....+..+ . .+++++.++.......+|..++|.+++.+.+. + |+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~ 170 (420)
T PRK09528 95 IYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-N-PQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-C-ch
Confidence 1111 11112233444444333333333333322 2 24567788888888899999999999988764 4 89
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchh
Q 016986 209 ICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (379)
+.|++.++..++.++..++.+++++.. ++..++.. ++.+.....+.++.+|+|.++
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~~~~ 226 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPST--AKVANALG----------------------ANASAVSLKDALALLKLPKFW 226 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccch--hhhccchh----------------------cccccccHHHHHHHccCCCeE
Confidence 999988777766665555544332110 00000000 001111223455678888877
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCC---ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Q 016986 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICS 365 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~ 365 (379)
...+................+.|..+.++..+. ..+.......++.+++.++.|++.||+++|+.+..+..+..+..
T Consensus 227 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~ 306 (420)
T PRK09528 227 FLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRI 306 (420)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHH
Confidence 655544444333333344566666655443332 24567777788888999999999999999999888888887777
Q ss_pred HHHHHHHHhh
Q 016986 366 SISLILEAFL 375 (379)
Q Consensus 366 ~~~~~~~~~~ 375 (379)
+++.+.++.+
T Consensus 307 ~l~~~~~~~~ 316 (420)
T PRK09528 307 IGSGFATGPL 316 (420)
T ss_pred HHHHhcccHH
Confidence 7766555544
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=1.6e-22 Score=185.34 Aligned_cols=175 Identities=14% Similarity=0.162 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHhhhhcccc-chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhHHH
Q 016986 51 PHVLVATLSSFLFGYHLGVVN-EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPM 128 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~ 128 (379)
+.+..+++..+...+...... .....+.+++|++.++. +++.+.+.....+..++.|+++|| +|||++++.+.+++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a--~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQA--FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 334444455555555444333 34456678899987776 789999998888889999999999 99999999999999
Q ss_pred HHHHHHHhcccchHH-HHHHHHHHHhhhchhhHHHHHHHHhhcCCC--cchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 129 IIGASISATTRNLIG-MLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
.++++.++++++... ++++|+++|+|.|...+...++++|.+|++ +|+++.++++.+.++|..+||.+++++.++.|
T Consensus 92 ~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 92 AIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999877555 457899999999999999999999999877 45789999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhc
Q 016986 206 WWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
||+.|++.++..++.++.+.+.
T Consensus 172 -w~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 172 -YSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998655443333333333
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.5e-23 Score=189.26 Aligned_cols=322 Identities=14% Similarity=0.104 Sum_probs=234.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~ 126 (379)
.+.|.+....++.+....-.....+.+.+.++++++.+.++. +|+.++..-...+.+|+.+.+.||+|.|.+.+.|.+
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~--~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQI--AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHH--HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 344777777777766665555666788999999999988886 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHH-HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 127 PMIIGASISATTRNLIGMLLG-RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
+.+++.++.+++++++++++. -++.|+|.|..+.....++..+|+ |+|+.+.|+...+.++|.++-|.+...+.+..|
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 999999999999999999886 688899999999999999998885 679999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCC-ChhHHHHcCChHHHHHHHH-----------HHhCCCc---hh---HHHHHHHhh
Q 016986 206 WWRICFWVSIVPAAILCLAMVFCAE-SPHWLYKKGRTAEAEAEFE-----------KLLGGSH---VK---SSLAELSKL 267 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~~~e-~p~~~~~~~~~~~~~~~~~-----------~~~~~~~---~~---~~~~~~~~~ 267 (379)
||+.+++.+.+.+-.++....+.+ +++. +++.++..+... ......+ .. .......+.
T Consensus 199 -~r~~~l~~~~~~l~~~~~~~~~rp~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (509)
T KOG2504|consen 199 -WRGALLIFGGISLNVLVAGALLRPLSPPK---KPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRG 274 (509)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcCCCCcCC---CchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhC
Confidence 999999876666555555444333 2210 000000000000 0000000 00 001111111
Q ss_pred hcCCC--CCcch-h---hhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Q 016986 268 DRGDD--GDIVK-F---EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVA 341 (379)
Q Consensus 268 ~~~~~--~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (379)
++... ..+.. . .++++++.++...+...+....+......++.|.. ..+....++..+....++..++++++.
T Consensus 275 ~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~ 353 (509)
T KOG2504|consen 275 PDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIIL 353 (509)
T ss_pred CccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhh
Confidence 11111 11112 2 58899999988888877777776666666666655 344455567789999999999999999
Q ss_pred HHHHHhhC--chHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016986 342 MVLMDKLG--RKALLQWSFFSMVICSSISLILEAFLV 376 (379)
Q Consensus 342 g~l~d~~g--~~~~~~~~~~~~~i~~~~~~~~~~~~~ 376 (379)
|++.|+.. ++....++.+..+++.+.+.+.++++.
T Consensus 354 G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~ 390 (509)
T KOG2504|consen 354 GLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVG 390 (509)
T ss_pred hhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 99999976 445666777777777777777666643
No 90
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=7.8e-21 Score=171.82 Aligned_cols=274 Identities=13% Similarity=0.049 Sum_probs=183.0
Q ss_pred HHHHHHhhhhccc-cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchh-HHHHHHHhHHHHHHHHHH
Q 016986 58 LSSFLFGYHLGVV-NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASIS 135 (379)
Q Consensus 58 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~ 135 (379)
...+......... ++..+.+.+++|++..+. |++.+++.++..++++++|+++||+|| |+++.++.++..++..+.
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~i--Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEI--GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 3344444454443 455566778899987777 999999999999999999999999965 888888898888888888
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhh--------cCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhh
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV--------SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (379)
.+.++++.+.+.|++.|++.+...+...++..+. .....|.+..| .+|.+++|.+++.+....+ |
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~-~ 159 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS-N 159 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch-h
Confidence 9999999999999999998877777665543222 22233445444 3677777877776643333 5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
+. |++.++..++..+..+++||+|+. +++++...+ +....+.++++|+|.+
T Consensus 160 ~~-f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~~~~-------------------------~~~~~~~~~~~k~~~~ 210 (418)
T TIGR00889 160 IQ-LYITAGSSALLGVFALTLPDIPVA---KSTAKMSIK-------------------------VMLGLDAFILFKNKRM 210 (418)
T ss_pred HH-HHHHHHHHHHHHHHHhcCCCCCCC---ccccccCHH-------------------------HHhhhhHHHHhcCCCe
Confidence 54 445555455554555667876521 110000000 0001134567888888
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcC--------CChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAG--------LSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 359 (379)
+...+..++............+.|..+. +.+. ...+.......+..+++.+..|+++||+|+|+.+.++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~ 289 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLV 289 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 7776666665444333333444444332 2111 234677888888999999999999999999999999888
Q ss_pred HHHHHHHHHHH
Q 016986 360 SMVICSSISLI 370 (379)
Q Consensus 360 ~~~i~~~~~~~ 370 (379)
+..++..++..
T Consensus 290 ~~~v~~~l~~~ 300 (418)
T TIGR00889 290 AWALRFGFFAY 300 (418)
T ss_pred HHHHHHHHHHH
Confidence 88777655544
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=2.1e-22 Score=168.44 Aligned_cols=140 Identities=24% Similarity=0.273 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
.|.+.+.|.+.+++.++.+|.++||+|||+++++|++..++...+.+.++|+..++++|++.|+..|-.. +..++++|.
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~-v~rAiisdV 148 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLS-VIRAIISDV 148 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchH-HHHHHHHhh
Confidence 4899999999999999999999999999999999999999999999999999777777999999876554 677999999
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHhhcccccc---cchhhHHHHHH----HHHHHHH-HHHHHhhcCCCh
Q 016986 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---IAGWWRICFWV----SIVPAAI-LCLAMVFCAESP 232 (379)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~wr~~f~~----~~~~~~~-~~~~~~~~~e~p 232 (379)
+++|+|+++++..+..+++|.++||.+|+++.. ..+ +.+|.. ..+.+.. .....+++||+-
T Consensus 149 ~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g--~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 149 VSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG--SYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred cChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc--cCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999999988 334 222222 2222222 233457789984
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.89 E-value=9.9e-21 Score=173.53 Aligned_cols=171 Identities=15% Similarity=0.149 Sum_probs=144.7
Q ss_pred HHHHHHHHHHhhhhccccchhhhhh-hh--ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhHHHH
Q 016986 54 LVATLSSFLFGYHLGVVNEPLESIS-LD--LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMI 129 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~-~~--~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~ 129 (379)
..+....+...+......+.+|.+. ++ +|++..+. +++.+++.++..++++++|+++|| +|||+++.++.++.+
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~a--g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQA--FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHH
Confidence 3444555666666655566677664 44 78876666 999999999999999999999999 899999999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCc---chhHHHHHHHHHHHHHHHHHhhcccccccchh
Q 016986 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (379)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (379)
++.++.+++++++.+++.|++.|+|.|...+...++++|++|+++ |+++.++++.+.++|.++||.+++.+.+..+
T Consensus 91 ~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g- 169 (475)
T TIGR00924 91 LGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG- 169 (475)
T ss_pred HHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999998754 8889999999999999999999999998888
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 016986 207 WRICFWVSIVPAAILCLAMVF 227 (379)
Q Consensus 207 wr~~f~~~~~~~~~~~~~~~~ 227 (379)
||+.|.+.++..++..+.+++
T Consensus 170 ~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999877655554444433
No 93
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.88 E-value=8.6e-21 Score=173.55 Aligned_cols=292 Identities=17% Similarity=0.159 Sum_probs=215.8
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
.++.+.+...++..+.....+.+..+. +.+....+++..+..+...+.++++|.++||++||++++.+.++..+..+.
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~l--t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQL--TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 455555566666555556666666554 445555699999999999999999999999999999999998877665544
Q ss_pred Hhcc-----cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHH
Q 016986 135 SATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (379)
Q Consensus 135 ~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~ 209 (379)
.++. .+.+.+++.-++.|++.+...|...+++.|..|+++...+.++.+...++..++||.++|.+....| -.+
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~~~ 170 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-AAA 170 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HHH
Confidence 4332 4788899999999999999999999999999999999999999999999999999999999998887 578
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhH
Q 016986 210 CFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRV 289 (379)
Q Consensus 210 ~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (379)
.|.+.++..++.++.....+++++ +++..++ +..+ .-...++-+.++|..+.
T Consensus 171 ~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e--~~~~-----------------------~l~~G~ryv~~~~~l~~ 222 (524)
T PF05977_consen 171 AFLINALSFLISILALLRWKPPPP---PSSLPRE--RFFS-----------------------ALREGLRYVRSSPPLRS 222 (524)
T ss_pred HHHHHHHHHHHHHHHHHHcccccc---ccccchh--hhhh-----------------------hHHHHHHHHhcchHHHH
Confidence 888876655554444444433211 0110000 0000 01123344455666666
Q ss_pred HHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Q 016986 290 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
.++..+++.+........+|.+..+.++......|++....++|.++|.++.+++.+|+++++++..+.++.+++.+.+.
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLA 302 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHh
Confidence 55555555554444455667777776666666678999999999999999999999999999988888888888888888
Q ss_pred HHHHhhhh
Q 016986 370 ILEAFLVL 377 (379)
Q Consensus 370 ~~~~~~~~ 377 (379)
+.++.+..
T Consensus 303 l~~~~~~~ 310 (524)
T PF05977_consen 303 LSPSFWLA 310 (524)
T ss_pred cchHHHHH
Confidence 87776543
No 94
>PTZ00207 hypothetical protein; Provisional
Probab=99.88 E-value=4.1e-20 Score=169.69 Aligned_cols=174 Identities=17% Similarity=0.120 Sum_probs=134.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
++|..+..........+... ..+.+.|.+++++|++..+. +++.++. .....++++.|++.||+|||++++++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~y-~fsv~s~~L~~~lgls~~~l--~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFMY-AFNLISGAMQARYNLTQRDL--STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcCHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 44555555444444444332 34567888999999987776 7777763 34456788899999999999999999999
Q ss_pred HHHHHHHHhcc------cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHH-HHhhcccc
Q 016986 128 MIIGASISATT------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG-SLLIGIPV 200 (379)
Q Consensus 128 ~~~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l 200 (379)
+++++++++++ ++++.+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+.+
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 689999999999999999999999999999997 77999999999999999865 55555554
Q ss_pred cccchhhHHHHHHHHHHHHHHHHH-HhhcC
Q 016986 201 KEIAGWWRICFWVSIVPAAILCLA-MVFCA 229 (379)
Q Consensus 201 ~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~ 229 (379)
. .+ |+..|++.++..++..++ ..+++
T Consensus 180 ~--~~-~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 180 S--DN-TSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred H--Hh-HHHHHHHHHHHHHHHHHHHHhhee
Confidence 3 24 788777766665554443 33433
No 95
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=6e-20 Score=153.43 Aligned_cols=284 Identities=15% Similarity=0.147 Sum_probs=226.1
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
+..+..+.+..+.-.-..+.++|.++++++|+|++.+.. |+++++..++..+.+++..++..|+|.++.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~a--GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVA--GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHH
Confidence 333333444444445566788999999999999998888 999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHH
Q 016986 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (379)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~ 209 (379)
++.++-... +...++.+-.+.|.|.+......+..+.+.||+ +-+..+++|....++|..+++.+...+.++.++||.
T Consensus 89 ~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 89 AGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 999998887 778888999999999999999999999999985 579999999999999999999999999888855999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhH
Q 016986 210 CFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRV 289 (379)
Q Consensus 210 ~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (379)
...+-+.++++.++.++- ... +++. .....+..+...++|+|.-|.
T Consensus 167 aL~~WAl~allAl~~WlP--q~~-----r~~~---------------------------~~~~~~~~~~~~vw~~~~aW~ 212 (395)
T COG2807 167 ALGFWALLALLALLIWLP--QAL-----REQA---------------------------ASIATKLVSVRKVWRSPLAWQ 212 (395)
T ss_pred HHHHHHHHHHHHHHHHhh--hcc-----cccc---------------------------cccccccccccccccCchhHH
Confidence 998888888877766542 211 1100 011122233456889999999
Q ss_pred HHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHH
Q 016986 290 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLG-RKALLQWSFFSMVICSSIS 368 (379)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~i~~~~~ 368 (379)
+.+...+..+.+++...|+|.++.+ .+.+..++|.+.....+..++..+....+.+|.. +|+........+.++.+.+
T Consensus 213 vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~ 291 (395)
T COG2807 213 VTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGL 291 (395)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 8888888888888888877776654 3555666788899999999999999999999764 5666666666666666665
Q ss_pred HHHH
Q 016986 369 LILE 372 (379)
Q Consensus 369 ~~~~ 372 (379)
.+.+
T Consensus 292 ~~~P 295 (395)
T COG2807 292 LLAP 295 (395)
T ss_pred HHhh
Confidence 5443
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.86 E-value=1.8e-19 Score=162.24 Aligned_cols=273 Identities=12% Similarity=0.003 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHH--HHHHHHHHHHHHHhHHh-hhccchhHHHHHHHhHHH-
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLV--VSMCLGGAFIGSTLSGW-IADGVGRRRAFQLCALPM- 128 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~s~~~~~~~i~~~~~g~-l~d~~Grr~~l~~~~~~~- 128 (379)
...+...++..+...+...+.+|.+.+|.|.+.++. |++ .+...+...+.+|+++. ..||+||||..++++.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i--Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL--AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 445566678888888888999999999999988877 886 46667888888888854 799999999876655332
Q ss_pred HHHHHHHh---cccc-hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc
Q 016986 129 IIGASISA---TTRN-LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (379)
Q Consensus 129 ~~~~~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (379)
.......+ ...+ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++++...+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 2222 3344445555666777777788888889998888898888888888999999998888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcc
Q 016986 205 GWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG 284 (379)
Q Consensus 205 ~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (379)
+ ||..|++.++..++..+..++.+|+++. +++.++ .+..+.++.+|+
T Consensus 161 g-w~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~~-----------------------------~~~~~~~~~l~~ 207 (390)
T TIGR02718 161 G-QRPAFLLVACVPLASLVCVLWLKDRAVA---SPEAPL-----------------------------ARRASLFRFFRR 207 (390)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccch-----------------------------hhHHHHHHHHcC
Confidence 8 9999999887776665555555443210 000000 011245678888
Q ss_pred cchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHH-HHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 016986 285 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 361 (379)
|..+......++..........+.+.|+.+ .+.+..+.|......+ +..+++.++.|++.||+|+|+.+..+..+.
T Consensus 208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 208 PLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 888777766666666555556666666654 3444444566655555 456678899999999999999888766555
No 97
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=1.2e-20 Score=172.61 Aligned_cols=266 Identities=17% Similarity=0.159 Sum_probs=187.0
Q ss_pred hhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc----chh-HHHHHHHhHHHHHHHHHHhcccc------h
Q 016986 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALPMIIGASISATTRN------L 141 (379)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~ 141 (379)
..+.+.+++|++.... |++.++..+..++..|+.|+++|| +|| |+.++.+....+++.+++...++ .
T Consensus 22 l~~~~~~~~g~s~~~~--g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFV--GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCCCHHHH--HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 4556677899987776 999999999999999999999997 687 45677788888888887776654 3
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhhc-CCCcchhHHHHHHHHHHHHHHHHHhhccccc-------ccchhhHHHHHH
Q 016986 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-------EIAGWWRICFWV 213 (379)
Q Consensus 142 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-------~~~~~wr~~f~~ 213 (379)
..+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+. +..+ ||+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g-~~~~~~i 178 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG-WFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-HHHHHHH
Confidence 55667788888888887777788888987 4689999999988888888766655544333 2335 9999988
Q ss_pred HHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHH
Q 016986 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (379)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
.+++.++..+.. ++.+|+++ +.+++ ++.+.+....+++++++|.++...+
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~-----~~~~~------------------------~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYS-----EIPKN------------------------IEKKLSLKQIFKALFKNDQLLILCL 229 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCC-----CCCcc------------------------cccCCCHHHHHHHHhCCHHHHHHHH
Confidence 777766655443 44666531 00000 0001111234667888898887776
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
..++............++|.+...+ .....+.......++.+++.++.++++||+|+|+.+..+..+..++.+++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 307 (437)
T TIGR00792 230 AYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA 307 (437)
T ss_pred HHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 6666555544443444455443333 22234556666788999999999999999999999988888777776665543
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.83 E-value=2.7e-18 Score=158.38 Aligned_cols=165 Identities=16% Similarity=0.159 Sum_probs=129.6
Q ss_pred HHHHHHHHHhhhhccccchh-hhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPL-ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~ 132 (379)
.++...+...+......+.+ ..+.+++|++..+. +++.+.+........+++|+++|| +|||++++.+.++.+++.
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a--~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADS--ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 34444444444443333444 44568899987766 677777766656667889999999 599999999999999999
Q ss_pred HHHhccc-chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCc--chhHHHHHHHHHHHHHHHHHhhcccccccchhhHH
Q 016986 133 SISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (379)
Q Consensus 133 ~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~ 209 (379)
+++++++ +.+.+.++|+++|++.|...+...+++.|++|+++ |..+.++++.+.++|..++|.+++++.+..| ||+
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~~~ 181 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-WSV 181 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-HHH
Confidence 9998874 56667788999999999998888899999998643 4567889999999999999999999998888 999
Q ss_pred HHHHHHHHHHHHH
Q 016986 210 CFWVSIVPAAILC 222 (379)
Q Consensus 210 ~f~~~~~~~~~~~ 222 (379)
.|++.++..++.+
T Consensus 182 ~F~i~~i~~~i~~ 194 (500)
T PRK09584 182 AFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHH
Confidence 9998775544433
No 99
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=2.5e-17 Score=141.66 Aligned_cols=291 Identities=15% Similarity=0.087 Sum_probs=206.8
Q ss_pred CccchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH
Q 016986 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (379)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~ 123 (379)
+..+++|.++++..+-++.+++....+++.......-++ +.+.. -|+.-+|++.+....+++-|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~--~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA--DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH--HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 345677999999999999998888888888888888888 43444 699999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhccc------chH--HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHh
Q 016986 124 CALPMIIGASISATTR------NLI--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (379)
Q Consensus 124 ~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 195 (379)
+....+++..+-..+. .++ ....+..+.+.+.-........+-.-||+++||+.+..+-.++..+|.+++.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999999866652 344 56678888888777777666677888999999999999999999999999999
Q ss_pred hcccccccc----h-hhHH--HHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhh
Q 016986 196 IGIPVKEIA----G-WWRI--CFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKL 267 (379)
Q Consensus 196 ~~~~l~~~~----~-~wr~--~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (379)
+...+..+. + .|-- .|+.....+.+.+++. +..++.|+. ++......
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t---Pps~s~~~---------------------- 249 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT---PPSASQAA---------------------- 249 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCchhHhh----------------------
Confidence 998887665 1 2544 2443333333333332 334444321 11111100
Q ss_pred hcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 016986 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (379)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (379)
..+.+...+.++.++|+.+....++..+....+++..+.+..-+ ...++.+..+|.......+++++++.++|.+.||
T Consensus 250 -~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk 327 (480)
T KOG2563|consen 250 -LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADK 327 (480)
T ss_pred -hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhh
Confidence 01222456788899999998877666555544433333222111 1123445678999999999999999999999999
Q ss_pred hCc-hHHHHHHHHHHHHH
Q 016986 348 LGR-KALLQWSFFSMVIC 364 (379)
Q Consensus 348 ~g~-~~~~~~~~~~~~i~ 364 (379)
.+. |.+..+.+....++
T Consensus 328 tk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 328 TKKFKLTTLVLYLFALVG 345 (480)
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 876 44455555554444
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.80 E-value=1.6e-17 Score=149.65 Aligned_cols=295 Identities=15% Similarity=0.153 Sum_probs=188.4
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc----cchhHHHHHHH-hHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQLC-ALPMI 129 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----~~Grr~~l~~~-~~~~~ 129 (379)
.++...+-..+......+.++.+.+++|.+.... +++..+..+...+.+|+.|.++| |+|||+.++.+ .+...
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~--~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQELGIPHAWA--SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 3334444445555666677777888999976665 89999999999999999999999 59999998874 66666
Q ss_pred HHHHHHhcccchH-----------------HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcc--hhHHHHHHHHHHHHH
Q 016986 130 IGASISATTRNLI-----------------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR--GTYGAFIQIATCLGL 190 (379)
Q Consensus 130 ~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~ 190 (379)
++.++.+++++.. .++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 7777777776643 222333344457777888889999999998765 579999999999999
Q ss_pred HHHHhhccccc--ccc------------hhhHHHHHHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCC
Q 016986 191 MGSLLIGIPVK--EIA------------GWWRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGS 255 (379)
Q Consensus 191 ~~~~~~~~~l~--~~~------------~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~ 255 (379)
++|+.+++... +.. .+.|+.|++.++..++..+.. +..+|.|.... ++..++ +.+
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~-~~~~~~---~~~------ 235 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGS-DDFINS---EAA------ 235 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc-ccchhh---hcc------
Confidence 99999987641 111 126889999877766665554 55788652110 000000 000
Q ss_pred chhHHHHHHHhhhcCCCCCcchhhhhhc-----ccchhHHHHHHHHHHHHHhhchhHHHHhHH-HHHHHcCC-----Ch-
Q 016986 256 HVKSSLAELSKLDRGDDGDIVKFEELLY-----GRHFRVVFIGSTLFALQQLSGINAIFYFSS-SVFKSAGL-----SS- 323 (379)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~- 323 (379)
+..+......++++++ .+..+.+++..++..+..+....+.+.|.. ++++..+. +.
T Consensus 236 ------------~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~g 303 (477)
T TIGR01301 236 ------------PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDG 303 (477)
T ss_pred ------------cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHH
Confidence 0000000111222222 235666666666666665555554444443 34432111 11
Q ss_pred ---h-HHHHHHHHHHHHHHHHHHHHHHhhCc-hHHHHHHHHHHHHHHHHHHHHHH
Q 016986 324 ---G-LANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 324 ---~-~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
| +......+...+.+++..++.+|+|+ |+...++.++.+++++...+..+
T Consensus 304 vr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~ 358 (477)
T TIGR01301 304 VRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTY 358 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 2 34455556666777788889999985 66667887788887777766553
No 101
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=5.9e-18 Score=156.60 Aligned_cols=181 Identities=15% Similarity=0.074 Sum_probs=135.8
Q ss_pred ccchhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH---HHhcccchHHHH
Q 016986 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS---ISATTRNLIGML 145 (379)
Q Consensus 70 ~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~---~~~~~~~~~~l~ 145 (379)
....+|.+. +++|.+..+. ++..+...++..++.++.|+++||+|||+++..+.++..++.+ ....+++...++
T Consensus 269 ~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (490)
T PRK10642 269 LLTYMPSYLSHNLHYSEDHG--VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIF 346 (490)
T ss_pred HHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 344566654 5678776554 6777888899999999999999999999998887765443332 223345677788
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 146 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
+++++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+..++|+.++++..+.+++.++..
T Consensus 347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 89999998877777778888999999999999999744434555677888888777654447877776666666666667
Q ss_pred hhcCCChhHHHHc-----CChHHHHHHHHHHh
Q 016986 226 VFCAESPHWLYKK-----GRTAEAEAEFEKLL 252 (379)
Q Consensus 226 ~~~~e~p~~~~~~-----~~~~~~~~~~~~~~ 252 (379)
+++||+|++..++ ++.+|+.+.+.++.
T Consensus 427 ~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 427 VTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 7789999987654 77788888877765
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.78 E-value=6.3e-18 Score=153.92 Aligned_cols=268 Identities=16% Similarity=0.180 Sum_probs=203.2
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc----cchhHHHHH-HHhHHHHHHHHHHhcc-c------
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQ-LCALPMIIGASISATT-R------ 139 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----~~Grr~~l~-~~~~~~~~~~~~~~~~-~------ 139 (379)
...+.+.+.+|++.... |++..+..+..++..|+.|.++| |+|||+..+ +|.+..+++.++.... +
T Consensus 23 ~~~~f~~~~~gl~~~~~--g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALA--GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 34556677779887666 89999999999999999999999 899765555 5778888877776655 4
Q ss_pred -chHHHHHHHHHHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhcccccccch------hhHHHH
Q 016986 140 -NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG------WWRICF 211 (379)
Q Consensus 140 -~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~wr~~f 211 (379)
....+.+..++..++.........++..|..+ +++|.+..+.-..+..+|.++...+.+.+.+..+ +|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23345667777788888888888999999997 5799999999999888888766666665553322 388888
Q ss_pred HHHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHH
Q 016986 212 WVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (379)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (379)
.+.+++.++..+.. +..+|++ ++.++ ++++.+....++++++||.++..
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~------~~~~~------------------------~~~~~~~~~~~~~~~~nr~~~~l 230 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERS------VEVTE------------------------QEKKISLRDSLRSLFRNRPFRIL 230 (428)
T ss_pred HHHHHHHHHHhhhhhheeeecc------ccccc------------------------cccccccccchhhhcccchHHHH
Confidence 88777766655544 4456621 00000 11222334567889999999998
Q ss_pred HHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Q 016986 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
....++............++|.....+..+ ..+.......++.+++.++.++++||+|+|+....+..+..++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 888888877777777778888888777663 3456667788899999999999999999999999999999999988888
Q ss_pred HH
Q 016986 371 LE 372 (379)
Q Consensus 371 ~~ 372 (379)
.+
T Consensus 310 ~~ 311 (428)
T PF13347_consen 310 LG 311 (428)
T ss_pred HH
Confidence 76
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.78 E-value=2.9e-16 Score=142.14 Aligned_cols=167 Identities=19% Similarity=0.169 Sum_probs=126.9
Q ss_pred HHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc-hhHHHHHHHhHHHHHHHH
Q 016986 56 ATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~ 133 (379)
++...+...+........+|. +.+++|++..+. +.+.+.+.....++++++|+++||+ |||++++++.++..++.+
T Consensus 14 l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a--~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~l 91 (493)
T PRK15462 14 VVALQIWEYFSFYGMRALLILYLTNQLKYDDNHA--YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHV 91 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHH
Confidence 333333444443333444554 456788887776 8889999999999999999999999 999999999999999987
Q ss_pred HHhccc-chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCC--cchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHH
Q 016986 134 ISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (379)
Q Consensus 134 ~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~ 210 (379)
+.+..+ +...+.++..+.++|.|...+...++++|.+|++ +|..+.++.+.+.++|..++|.+.+++.+..| |++.
T Consensus 92 ll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w~~~ 170 (493)
T PRK15462 92 VLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-WAMG 170 (493)
T ss_pred HHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-hHHH
Confidence 776543 2233444444555667777777788999999875 79999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHH
Q 016986 211 FWVSIVPAAILCLAM 225 (379)
Q Consensus 211 f~~~~~~~~~~~~~~ 225 (379)
|.++++..++.++.+
T Consensus 171 F~iaaigm~l~li~~ 185 (493)
T PRK15462 171 FGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998766544444433
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.77 E-value=3.7e-17 Score=149.66 Aligned_cols=298 Identities=14% Similarity=0.074 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch-----hHHHHHHHhH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCAL 126 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G-----rr~~l~~~~~ 126 (379)
...++...++..+..........+.+.+++|++..+. +...+...+...+-.+ +|+++||++ ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i--~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARY--QRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 3344444556666663344556677788899998877 7888999999888666 999999998 7888888877
Q ss_pred HHH-HHHHHHhcccchHHHHH-HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHH---HHHHHHHHHHHHhhccccc
Q 016986 127 PMI-IGASISATTRNLIGMLL-GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI---QIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 127 ~~~-~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~g~~~~~~~~~~l~ 201 (379)
+.+ +.....+..++.....+ ..++.+++.+...++.-++..|..+ +++....+.. .....+|.++++.+++.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 763 44444444455444444 7899999999999999999999998 5555443333 3344589999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhh
Q 016986 202 EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEEL 281 (379)
Q Consensus 202 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (379)
+..+ ||..|++.+...++..+..++++|++... +++.++........ ......+ .......+.++.
T Consensus 183 ~~~~-~~~~f~~~a~l~ll~~~~~~~~~E~~~~~--~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~l~~~ 248 (468)
T TIGR00788 183 DKTL-TRILFLITAALLLLQLFVSNLSKERRAFV--RPRIGTYLEMNMAL----LTLGVLA-------NVKVQILGLRGA 248 (468)
T ss_pred HhcC-cchHHHHHHHHHHHHHHHHHhcccccccc--cccccccchhhhhh----hhhhHHH-------HHHHHHHHHHHH
Confidence 8888 99999997777766655567778763100 01100000000000 0000000 000001234445
Q ss_pred hcccchhHHHHHHHH-HHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Q 016986 282 LYGRHFRVVFIGSTL-FALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (379)
Q Consensus 282 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 360 (379)
+++|..+...+..++ +... ........++.+...+.++...|......+++.+++....+++.+|++.|+.+.++.++
T Consensus 249 l~~~~i~~~l~fifl~~~~~-~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l 327 (468)
T TIGR00788 249 IQLLEIAKPLIFIFLSYANL-PGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLL 327 (468)
T ss_pred HhcHHHHHHHHHHHHHHhhc-CCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 677777665544444 2211 11111111233445667777788888899999999999999999999999999988888
Q ss_pred HHHHHHHH
Q 016986 361 MVICSSIS 368 (379)
Q Consensus 361 ~~i~~~~~ 368 (379)
..++.+..
T Consensus 328 ~~~~~~~~ 335 (468)
T TIGR00788 328 YTLSSLFD 335 (468)
T ss_pred HHHHHhCc
Confidence 88766543
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=7.2e-17 Score=147.70 Aligned_cols=259 Identities=16% Similarity=0.179 Sum_probs=168.4
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc----chh-HHHHHHHhHHHHHHHHHHhcccc------
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALPMIIGASISATTRN------ 140 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------ 140 (379)
.....+.+++|++.... |++.++..+..++..|+.|.++|| +|| |+.++.+.+..++..++....++
T Consensus 31 ~l~~~~t~~~gls~~~~--g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIM--GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 34556778899987776 999999999999999999999998 787 45566677777777665544443
Q ss_pred hHHHHHHHHHHHhhhchhhHHHHHHHHhhc-CCCcchhHHHHHHHHHHHHHHHHHhhcccccc-------cchhhHHHHH
Q 016986 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-------IAGWWRICFW 212 (379)
Q Consensus 141 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~wr~~f~ 212 (379)
...+++..++.+.+.+.......++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..+ |+..+.
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g-~~~~~~ 187 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKG-YFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh-HHHHHH
Confidence 455566666777666666667778999998 45889998888888878877766654333221 223 887777
Q ss_pred HHHHHHHHHHHHH-hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHH
Q 016986 213 VSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (379)
Q Consensus 213 ~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (379)
+.+++.++..+.. +..+|.++ ++ ++ ++.+...+.+++++||.++..+
T Consensus 188 i~~ii~~v~~~~~~~~~~e~~~-----~~-~~--------------------------~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 188 VMGLLGVVLFFCCFFMTKERYT-----PE-VD--------------------------NSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred HHHHHHHHHHHHHhCCeEEecC-----CC-Cc--------------------------CCCCHHHHHHHHhCCchHHHHH
Confidence 7666655544433 33444311 00 00 0111234567788999988877
Q ss_pred HHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Q 016986 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSS 366 (379)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~ 366 (379)
...++.............+|.....+. +...+.......+..+++.++.++++||+|+|+....+.+...++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 309 (444)
T PRK09669 236 IFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSA 309 (444)
T ss_pred HHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 666555444433333334444433322 11123444455677788889999999999999988877765554333
No 106
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=5.4e-18 Score=136.59 Aligned_cols=285 Identities=17% Similarity=0.108 Sum_probs=199.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCAL 126 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~ 126 (379)
++...+...++..|-+++.....+....+...|.+++..+. .++.++|.....+.+++.|++.|| +|-|..-++-+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akf--tLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKF--TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeee--eeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 44555555566666667777777778888888888877676 799999999999999999999996 788887777777
Q ss_pred HHHHHHHHHh---cccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 127 PMIIGASISA---TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 127 ~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
...++.++++ .++.+|.+.++|++.|+|.-....+...|..-|+..|+.+.++|+......+|..+.-.+.+++.+.
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 7777777654 5689999999999999998888888999999999999999999999999999988877777777654
Q ss_pred chh-h----HHHH---HHHH----HHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCC
Q 016986 204 AGW-W----RICF---WVSI----VPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGD 271 (379)
Q Consensus 204 ~~~-w----r~~f---~~~~----~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (379)
.+. . +... +... ...++++...-+. +++.|+ .+++ ++..
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~---------D~rAer---ilh~-----------------e~g~ 249 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLS---------DDRAER---ILHL-----------------EEGF 249 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------hhHHHH---HHhh-----------------hcCc
Confidence 431 0 0000 0000 0011111110000 011111 1000 1111
Q ss_pred CCCcchhhhhh-cccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 016986 272 DGDIVKFEELL-YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGR 350 (379)
Q Consensus 272 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 350 (379)
..+..+..+.. -.+.+|.+.+.++++....+-.+..-+.++++.++.++.+++.+.........+..++.|.++||+|+
T Consensus 250 ~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~ 329 (459)
T KOG4686|consen 250 LGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGF 329 (459)
T ss_pred ccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcc
Confidence 11111111111 13778888888888888888888888888999999998888877777777888899999999999999
Q ss_pred hHHHHHHHHHHHH
Q 016986 351 KALLQWSFFSMVI 363 (379)
Q Consensus 351 ~~~~~~~~~~~~i 363 (379)
+.+.+.+..+..+
T Consensus 330 n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 330 NLWWVASACILTL 342 (459)
T ss_pred eehhHHHHHHHHH
Confidence 8665554444333
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.74 E-value=1.3e-15 Score=135.75 Aligned_cols=281 Identities=15% Similarity=0.164 Sum_probs=195.8
Q ss_pred HHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch-hHHHHHHHhHHHHHHHHHHh
Q 016986 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISA 136 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G-rr~~l~~~~~~~~~~~~~~~ 136 (379)
..+++.....+...|.++.+-++.|++..++ |.+.++..+...++++++|.++||++ +|+++.++.++.++..+...
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qI--G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGFSGTQI--GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3345555566667788899999999988877 99999999999999999999999986 57788788787777777778
Q ss_pred cccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhh-cccccccch--hhHHHHHH
Q 016986 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI-GIPVKEIAG--WWRICFWV 213 (379)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~~--~wr~~f~~ 213 (379)
..++++.+++.-++..+...+..|...++..+...+ +++-.|-.-...++|.+++... +..+....+ ...+.+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 889999888888888888888888888888887752 3333444444445555444322 111221111 12345566
Q ss_pred HHHHHHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHH
Q 016986 214 SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (379)
Q Consensus 214 ~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
.+...++.....+.+|+.|+ +++.++ +.++....+..+++|+|++...++.
T Consensus 165 ~~~~~~ll~~~~l~lp~~~~----~~~~~~-------------------------~~~~~~~~~~~~llk~~~~~~Fll~ 215 (400)
T PF03825_consen 165 AAILSLLLAGFALFLPKTPP----KRSAKE-------------------------SVKKLLGLDALKLLKNPRFLVFLLA 215 (400)
T ss_pred HHHHHHHHHHHHHhCCCCcc----ccccCC-------------------------CcccccchHHHHHhcCccHHHHHHH
Confidence 55555555444566787652 111000 0111112234578999999888888
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
.++........+++.+.|+.+.-+......+.......+++++.-...+++..|+|.++++.++.+..++=..++...
T Consensus 216 ~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 216 AFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777777767777777665433334445667777888999999999999999999999999988887777666665
No 108
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.72 E-value=2.5e-16 Score=145.03 Aligned_cols=280 Identities=11% Similarity=0.062 Sum_probs=172.6
Q ss_pred HHHHHHhhhhccccchh-hhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc----cchh-HHHHHHHhHHHHHH
Q 016986 58 LSSFLFGYHLGVVNEPL-ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGR-RRAFQLCALPMIIG 131 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----~~Gr-r~~l~~~~~~~~~~ 131 (379)
++.+...+..+...+++ ..+.+.+|++.... |.+..+.-+..++..|++|.++| |+|| |+.++.+.+..+++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~v--g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV--GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 34444444444444443 44556679887666 99999999999999999999999 6698 66667788877777
Q ss_pred HHHHhcccc------hHHHHHHHHHHHhhhchhhHHHHHHHHhhc-CCCcchhHHHHHHHHHHHHHHHHHhhcccc----
Q 016986 132 ASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPV---- 200 (379)
Q Consensus 132 ~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l---- 200 (379)
.++.-..++ +..+++..++.+++.+.......++..|.. ++++|.+..++-..+.++|..+.+.+...+
T Consensus 91 ~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 91 LFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544332 334555666777888888888889999999 589999998886666666644444333221
Q ss_pred c---ccchhhHHHHHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcc
Q 016986 201 K---EIAGWWRICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV 276 (379)
Q Consensus 201 ~---~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (379)
. +..+ |+....+.++..++..+. ++..+|.++. +..++ . ++++.+...
T Consensus 171 g~~~~~~g-~~~~~~i~~~~~~~~~~~~~~~~~e~~~~----~~~~~-~----------------------~~~~~~~~~ 222 (473)
T PRK10429 171 GGGDRGFG-FQMFTLVLIAFFIVSTIITLRNVHEVYSS----DNQVS-A----------------------EGSHLTLKD 222 (473)
T ss_pred CCCchhhh-HHHHHHHHHHHHHHHHHHHHcCceecCCc----ccccc-c----------------------cccCCCHHH
Confidence 1 1123 676666655555444333 3335554210 00000 0 001111223
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHH
Q 016986 277 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (379)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 356 (379)
.++.+++||.++..+...++............++|.....+. ....+.......++.+++.++.+++.||+|+|+.+.+
T Consensus 223 ~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~ 301 (473)
T PRK10429 223 IVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGD-ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAG 301 (473)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 445567888887777666665554444334444444333221 1123345556668888999999999999999999887
Q ss_pred HHHHHHHHHHHH
Q 016986 357 SFFSMVICSSIS 368 (379)
Q Consensus 357 ~~~~~~i~~~~~ 368 (379)
+..+..++.+.+
T Consensus 302 ~~~~~~~~~~~~ 313 (473)
T PRK10429 302 ASIFPVLSCGVL 313 (473)
T ss_pred HHHHHHHHHHHH
Confidence 776655544443
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.71 E-value=7.7e-16 Score=145.99 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcC
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 171 (379)
+...+..++..++.++.|+++||+|||+++++++++.++++++.+++++...+++.+++.|++.+...+...++++|++|
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44556668889999999999999999999999999999999999999988888888999999888889999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
.++|++++|+.+....+|.+++|.+++.+.... ...+|++.++..++..++.+++||+
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~~LPET 736 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGIT--KAAPILFASAALACGGLLALKLPDT 736 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998877643 4677877777777766666778987
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.71 E-value=7.5e-16 Score=133.37 Aligned_cols=204 Identities=16% Similarity=0.146 Sum_probs=149.8
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc-----------
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA----------- 204 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------- 204 (379)
+..++++.++++-++.|.|.+...+....++++..+++++++.+++.+..+++|..++|++++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 355789999999999999999999999999999999999999999999999999999999999776321
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHhh--cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchh
Q 016986 205 ----GWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKF 278 (379)
Q Consensus 205 ----~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (379)
.+|+++|++.+...++..+.+.+ +||.+ ++.++ +. . .+ +..+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~------~~~~~--~~--------------------~-~~--~~~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQ------EADVA--RV--------------------S-SG--DTTQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC------ccccc--cc--------------------c-cc--cccch
Confidence 24999999655554444444433 34431 11000 00 0 00 00112
Q ss_pred hhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHH--HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHH
Q 016986 279 EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV--FKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (379)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 356 (379)
++.+++|.++...+..+++.....+...+.+.|+.+. ++.+..+.+........+.++|+++++++.||+++|+.+.+
T Consensus 134 ~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 134 TSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456677777777777777777777788888888643 34555566788889999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHH
Q 016986 357 SFFSMVICSSISLI 370 (379)
Q Consensus 357 ~~~~~~i~~~~~~~ 370 (379)
+..+..++.++...
T Consensus 214 ~~~l~~~~~~l~~~ 227 (310)
T TIGR01272 214 NAFLAVLLSIGAAL 227 (310)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666644443
No 111
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.70 E-value=1e-18 Score=160.47 Aligned_cols=301 Identities=16% Similarity=0.181 Sum_probs=3.0
Q ss_pred HHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh
Q 016986 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (379)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~ 136 (379)
++..+...+..+.....++.++++|+++.++. |++.+.+-++..+..++..++.+|..|-+.+-.|.+++++++++++
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~--G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS--GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 33344445666677888999999999998888 9999999999999999999999998888888899999999988876
Q ss_pred cc------------c--------------------------------------chHHHHHHHHHHHhhhchhhHHHHHHH
Q 016986 137 TT------------R--------------------------------------NLIGMLLGRFVVGTGMGLGPTVAALYV 166 (379)
Q Consensus 137 ~~------------~--------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i 166 (379)
+= . -+..+++++++.|+|.++.+++..+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 40 0 035577889999999999999999999
Q ss_pred HhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc---------------------hhhHHHHHHHHHHHHHHHHHH
Q 016986 167 TEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------------------GWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 167 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~wr~~f~~~~~~~~~~~~~~ 225 (379)
-|..++++-+..+|+......+|.++|.++++.+.+.. |.|+..|++.+...++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998776431 127777777777777777777
Q ss_pred hhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHH---HhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHh
Q 016986 226 VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAEL---SKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (379)
Q Consensus 226 ~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
+++|++-+...+..+.++.++ . + ..+.......+. .......+......+++++||.+....++.........
T Consensus 247 ~~FPk~lp~~~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~ 322 (539)
T PF03137_consen 247 FFFPKKLPGTSERQEEKESSE-R-K--EEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVS 322 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcccccchhhhhh-c-c--hhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 777765321100000000000 0 0 000000000000 00111223445667889999999988888888888888
Q ss_pred hchhHHHHhHHHHHHHcCCChhHHHH-HHHHHHHHHHHHHHHHHHhhC--chHHHHHHHHHHHH
Q 016986 303 SGINAIFYFSSSVFKSAGLSSGLANV-FVGIANLLGSVVAMVLMDKLG--RKALLQWSFFSMVI 363 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~i 363 (379)
...+..|-|++..++.+...+..+.. ....+.++|.+++|++.+|++ .|..+....+...+
T Consensus 323 G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v 386 (539)
T PF03137_consen 323 GFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIV 386 (539)
T ss_dssp ----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHH
Confidence 88888999999888887777665443 334467789999999999974 34444444443333
No 112
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.70 E-value=1.8e-16 Score=121.03 Aligned_cols=136 Identities=22% Similarity=0.384 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCC
Q 016986 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 173 (379)
.+.+.++..++.++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34556788899999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhh-cCC
Q 016986 174 VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF-CAE 230 (379)
Q Consensus 174 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e 230 (379)
+|++..++.+....+|..+++.+.+.+.+..+ |++.|++.+...++..+...+ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999988877 999998877776665555443 443
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=99.69 E-value=3.3e-15 Score=137.02 Aligned_cols=278 Identities=14% Similarity=0.142 Sum_probs=166.7
Q ss_pred HHHHHHhhhhccccc-hhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc----hhHHHH-HHHhHHHHHH
Q 016986 58 LSSFLFGYHLGVVNE-PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV----GRRRAF-QLCALPMIIG 131 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~----Grr~~l-~~~~~~~~~~ 131 (379)
++.+..........+ ..+.+.+.+|++..+. |++.++..+..++..+++|+++||. |||+.+ +.+.+...+.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAA--GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 344344433333333 3346667789877666 9999999999999999999999996 777654 5555544444
Q ss_pred HHHH-hc----ccc--hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC-CcchhHHHHHHHH-----HHHHHHHHHhhcc
Q 016986 132 ASIS-AT----TRN--LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIA-----TCLGLMGSLLIGI 198 (379)
Q Consensus 132 ~~~~-~~----~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~g~~~~~~~~~ 198 (379)
.++. .. +++ ....++...+.+++.+...+...++..|..++ ++|.+..++-..+ ..++..++|.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 93 SVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 21 122 22334455677887888877777777777754 6788876665543 3345556666655
Q ss_pred cccccch-hhHHHHHHHHHHHHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcc
Q 016986 199 PVKEIAG-WWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV 276 (379)
Q Consensus 199 ~l~~~~~-~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (379)
....... .|.....+.++..++..+ .....+|+++ ++. ++.....
T Consensus 173 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~-----~~~----------------------------~~~~~~~ 219 (448)
T PRK09848 173 SSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVV-----RIV----------------------------AQPSLKI 219 (448)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccC-----CCc----------------------------cCCCHHH
Confidence 3322111 121111122222222222 2223444321 000 0011123
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHH
Q 016986 277 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (379)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 356 (379)
.++++++||.+....+..++............++|..+.++......+.......++.+++.++.+++.||+++|+.+.+
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 46778999999888777777766666655566666666555433323344444456778899999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 016986 357 SFFSMVICSSISLI 370 (379)
Q Consensus 357 ~~~~~~i~~~~~~~ 370 (379)
+.+++.++.+++.+
T Consensus 300 g~~~~~i~~~~~~~ 313 (448)
T PRK09848 300 GALLGTCGYLLFFW 313 (448)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887777766654
No 114
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.69 E-value=3.5e-15 Score=132.22 Aligned_cols=185 Identities=21% Similarity=0.232 Sum_probs=144.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchh-HHHHHHHhH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCAL 126 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~ 126 (379)
..|+.+.+..+..++.....+++.+..-++.++++.+.+....|++.++..++.+++++.+|+++.|.|. |+.++.|.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 3477888888889999998888777776677776555555555999999999999999999999999996 788899999
Q ss_pred HHHHHHHHH-hc---cc-chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 127 PMIIGASIS-AT---TR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 127 ~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
+..+++++. +. .+ ..+.++++|++.|+|.|... ..-+|+++....++|.++++....+..+|.++||.++..+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 999999887 33 23 57788899999999877654 67799999998999999999999988888888888776554
Q ss_pred ccc--h----------hhHHHHHHHHHHHHHHHHHH-hhcCCChh
Q 016986 202 EIA--G----------WWRICFWVSIVPAAILCLAM-VFCAESPH 233 (379)
Q Consensus 202 ~~~--~----------~wr~~f~~~~~~~~~~~~~~-~~~~e~p~ 233 (379)
... | .+..+-|+.++..++.++.. +++.|.++
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 321 1 13455666666666665544 45667643
No 115
>PRK11462 putative transporter; Provisional
Probab=99.68 E-value=1.2e-14 Score=133.03 Aligned_cols=253 Identities=15% Similarity=0.107 Sum_probs=165.9
Q ss_pred hhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc----chhHH-HHHHHhHHHHHHHHHHhcccc------h
Q 016986 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRR-AFQLCALPMIIGASISATTRN------L 141 (379)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~ 141 (379)
....+.+..|++.... |++..+.-+--++..|+.|.++|| +|||+ .++++.+..+++.+++-..++ .
T Consensus 32 l~~fyt~~~Gl~~~~~--g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 32 MMFFYTDIFGIPAGFV--GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHhhCCCHHHH--HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 3445567788876665 888888888899999999999995 78864 455576777777666544442 3
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhcccccccch------hhHHHHHHH
Q 016986 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG------WWRICFWVS 214 (379)
Q Consensus 142 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~wr~~f~~~ 214 (379)
..+.+.-.+..++.........++.+|..+ ++||++..++...+..+|..+++.+...+....+ +|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 445556667788888888888899999997 7999999999999999887777666443332211 267666665
Q ss_pred HHHHHHHHHHHh-hcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHH
Q 016986 215 IVPAAILCLAMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (379)
Q Consensus 215 ~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
+++.+++.+..+ ..+|.++ .+. ++.+.....+..++||.++.....
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~-----~~~----------------------------~~~~~~~~l~~~~~Nk~~~~l~~~ 236 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVE-----APP----------------------------TTTSMREDLRDIWQNDQWRIVGLL 236 (460)
T ss_pred HHHHHHHHHHHHhcceeccC-----CCc----------------------------cCCCHHHHHHHHhCChHHHHHHHH
Confidence 555544443333 2344321 000 000112345677888888777655
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 016986 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 361 (379)
.++.............+|.....+... ..+.......++.+++.++++++.||+++|+....+....
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 555555444444455555555443221 2335566777888999999999999999988766444433
No 116
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.67 E-value=1.4e-15 Score=133.03 Aligned_cols=289 Identities=19% Similarity=0.206 Sum_probs=175.2
Q ss_pred HHHHHHhhhhccccchhhhhhh-hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH--HHHH-H
Q 016986 58 LSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM--IIGA-S 133 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~--~~~~-~ 133 (379)
...+...+..+...|..+...+ +.|++.++. |.+.++..+...+.+|+.|.++||+|.||-++....+. ..+. +
T Consensus 14 ~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~i--G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff 91 (412)
T PF01306_consen 14 LFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEI--GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF 91 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCCCHHHH--HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 3334444445555666666555 489988888 99999999999999999999999999666544433222 2222 2
Q ss_pred HHhcc----cch-HHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 134 ISATT----RNL-IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 134 ~~~~~----~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
...+. .|. ...+++-...|+......|+.-+++.++. ++.+.-.|=.-+..++|.+++..++|.+.+..+ +
T Consensus 92 ~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p--~ 167 (412)
T PF01306_consen 92 IYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINP--N 167 (412)
T ss_dssp HHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCc--c
Confidence 22222 232 23334444556666666777777776665 233445566667788898899999998887543 6
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccch
Q 016986 209 ICFWVSIVPAAILCLAMVFCA-ESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~~~~-e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (379)
..|++....+++..++.++.+ +.++ +.+.++.. ..++++....+..+++|+|++
T Consensus 168 ~~fwi~s~~~~il~lll~~~~~~~~~----~~~~~~~~---------------------~~~~~~~~~~~~~~l~k~~~f 222 (412)
T PF01306_consen 168 IIFWIASAAAIILLLLLLLLKPDVPP----QAEVADAL---------------------GAKKDKVSLKDVLSLFKMRNF 222 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHSS---SSS----SS-SSTTS---------------------SS------HHHHHHHTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCch----hhhhhccc---------------------ccCCCCCcHHHHHHHhcchhH
Confidence 777876666555555444433 3221 00000000 000111112345688999999
Q ss_pred hHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc---CCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Q 016986 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSA---GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVIC 364 (379)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~ 364 (379)
|.+.+........+.......+.|....++.. ....|++.....+.+++...+..++.+|+|.|+.++++..++.+=
T Consensus 223 w~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iR 302 (412)
T PF01306_consen 223 WFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIR 302 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHH
Confidence 98776655555444444444555554433221 112567888888999999999999999999999999999888888
Q ss_pred HHHHHHHHHhhhh
Q 016986 365 SSISLILEAFLVL 377 (379)
Q Consensus 365 ~~~~~~~~~~~~~ 377 (379)
.+...+.++.+.+
T Consensus 303 i~~~~~~~~~~~i 315 (412)
T PF01306_consen 303 IIGSGFATNPWVI 315 (412)
T ss_dssp HHHHHT--SHHHH
T ss_pred HHHHhhhcchHHH
Confidence 7877777666543
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.66 E-value=4.5e-16 Score=143.31 Aligned_cols=301 Identities=15% Similarity=0.167 Sum_probs=219.2
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 132 (379)
+.+..+..+..++..+.+...+..+.+.|+++.++. |++.+.+-++..+...+..+..-|.-|-+.+-.|++++++++
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s--G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS--GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc--eeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 344555566667777788889999999999998887 999999999999999999999999999999999999999999
Q ss_pred HHHhcc--------------------c------------------------------c-hH-HHHHHHHHHHhhhchhhH
Q 016986 133 SISATT--------------------R------------------------------N-LI-GMLLGRFVVGTGMGLGPT 160 (379)
Q Consensus 133 ~~~~~~--------------------~------------------------------~-~~-~l~~~r~l~G~~~~~~~~ 160 (379)
+++++= + + ++ .++++.++.|+|..+.++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 998761 0 0 22 455679999999999999
Q ss_pred HHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc------------------hhhHHHHHHHHHHHHHHH
Q 016986 161 VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA------------------GWWRICFWVSIVPAAILC 222 (379)
Q Consensus 161 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~wr~~f~~~~~~~~~~~ 222 (379)
.+.+|+-|...+++-+..+|+......+|.++|.++++.+.+.. |-|+.-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988775321 128888889888888888
Q ss_pred HHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHh
Q 016986 223 LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (379)
Q Consensus 223 ~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
+.++++|.+.+.. .++.+ .+..+.........+ ......+.-+..+...+++++|+.+....+...+......
T Consensus 337 ~p~f~fPk~lp~~---~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~ 409 (735)
T KOG3626|consen 337 VPLFFFPKELPKS---QKRKR-ARDLHVLKTESGGAK---SDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAIT 409 (735)
T ss_pred HHHHhCcccCccc---cccch-hhhhccccccccccc---CCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHh
Confidence 8888888764311 11000 000000000000000 0000000001223456888999999999999988888888
Q ss_pred hchhHHHHhHHHHHHHcCCChhHHHHHH-HHHHHHHHHHHHHHHHhhC--chHHHHHHHHHHH
Q 016986 303 SGINAIFYFSSSVFKSAGLSSGLANVFV-GIANLLGSVVAMVLMDKLG--RKALLQWSFFSMV 362 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~ 362 (379)
...+++|-|+...++.+...+..+.... ..+..+|.+++|++..|+. .|....+..+...
T Consensus 410 G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 410 GYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 8888999999988887776666555333 3455678899999999874 3444444433333
No 118
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.65 E-value=4.2e-15 Score=134.70 Aligned_cols=158 Identities=23% Similarity=0.188 Sum_probs=131.8
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
....|.+.++.|.+..+. +.+.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+..++
T Consensus 240 ~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK11551 240 LNWLPSLLVGQGLSRSQA--GLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHHHhCCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 345677778888877666 889999999999999999999999999999988877777777777778888888888888
Q ss_pred HHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCC
Q 016986 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (379)
Q Consensus 151 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 230 (379)
.|++.+...+...++..|.+|+++|+++.++.+....+|..++|.+++.+.++.++|...++......++..+..+++.+
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988888888899999999999999999999999999999999999999887665777777666665555555444433
No 119
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.65 E-value=9.2e-15 Score=131.70 Aligned_cols=155 Identities=14% Similarity=0.187 Sum_probs=126.5
Q ss_pred chhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
...|. +++++|.+..+. +++.+....+..++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~~~~~~--g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHLPEKLA--GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34554 456788876655 777777777778899999999999999998888776666655555567788888889999
Q ss_pred HHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCC
Q 016986 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (379)
Q Consensus 151 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 230 (379)
.+++.+...+....+..|.+|+ +|+++.++++....+|..+++.+++.+.+..+ |+..|++.++..++.++..++.||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9888888777788888999985 59999999999999999999999999998887 999999888877777777666654
No 120
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.64 E-value=1.7e-15 Score=137.83 Aligned_cols=141 Identities=12% Similarity=0.017 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
.|++.++..++..++.+++|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999999988999999999999999999999888888888999999
Q ss_pred cCCCcchhHHHH-HHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH-hhcCCC
Q 016986 170 SPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM-VFCAES 231 (379)
Q Consensus 170 ~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~ 231 (379)
+|++.|+...+. ++....+|.++++.+.+.+.+..| |+..|.+.++..++..++. .+++++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999887665 677788999999999999999888 9999998766665544443 344444
No 121
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.6e-14 Score=127.78 Aligned_cols=287 Identities=19% Similarity=0.187 Sum_probs=202.6
Q ss_pred HHHHHHHHHhhhhccccch-hhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc----chh-HHHHHHHhHHH
Q 016986 55 VATLSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALPM 128 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~----~Gr-r~~l~~~~~~~ 128 (379)
.-.++-+............ +-.+.+.+|++.... |.+..+-=+--++.-|+.|.++|| +|| |+.++.+.+..
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~a--G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALA--GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHH--HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 3334444443333333333 344566788876665 777777778888999999999995 786 45666688888
Q ss_pred HHHHHHHhcccc------hHHHHHHHHHHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 129 IIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 129 ~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
++.+.++-.+++ ....++...+.+++.......-.++.+|+.+ ++||.+..++-+.+..+|.++...+.+.+.
T Consensus 94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877764 4455667888899988888888899999886 689999999999999988666555544443
Q ss_pred cc-------chhhHHHHHHHHHHHHHHHHHHhh-cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCC
Q 016986 202 EI-------AGWWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDG 273 (379)
Q Consensus 202 ~~-------~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (379)
.. .| |+..-.+.++++++..+..++ .+|.+. +..+.+ +..+.+
T Consensus 174 ~~~g~~~~~~g-~~~~~~~~~vi~~i~~l~~~~~v~ER~~----~~~~~~------------------------~~~~~~ 224 (467)
T COG2211 174 KLFGGGDKALG-YQGTALVLGVIGVILLLFCFFNVKERVV----ETQPTK------------------------TGVKLK 224 (467)
T ss_pred HHhCCCcchhh-HHHHHHHHHHHHHHHHHHHHHHhhcccC----ccccCc------------------------cccccc
Confidence 22 23 666666655555555444333 444321 000000 001111
Q ss_pred CcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHH
Q 016986 274 DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKAL 353 (379)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 353 (379)
....+..+++||.+...++..++.........+...+|.+..++...............+.+++.++..++.+|+|+|++
T Consensus 225 ~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~ 304 (467)
T COG2211 225 LKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKL 304 (467)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH
Confidence 12234568899999988887777777776667777888888777777777778888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 016986 354 LQWSFFSMVICSSISLILE 372 (379)
Q Consensus 354 ~~~~~~~~~i~~~~~~~~~ 372 (379)
..++.++..++.+++.+.+
T Consensus 305 ~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 305 FLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999888876
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.64 E-value=1.2e-14 Score=131.42 Aligned_cols=155 Identities=15% Similarity=0.076 Sum_probs=129.4
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHH
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 151 (379)
..++.+.++.|.+ +. ++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.
T Consensus 237 ~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 237 TFITLYYAARGWD--GA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHcccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3445455555552 23 5667788888899999999999999999999999888888888888888888888899999
Q ss_pred HhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 152 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
|++.+...+.......|.+|+++|+++.++++....+|..+++.+.+.+.+..| |++.|++.++..++.++..++++++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999998888888888899999999999999999999999999989999988888 8999998877777766665555444
No 123
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.63 E-value=2.2e-13 Score=123.85 Aligned_cols=252 Identities=17% Similarity=0.169 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHH-hHHHHHHHHHHhcc--cchHHHHHHHHHHHhhhchhhHHHHHHHH
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC-ALPMIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~-~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 167 (379)
++..++..+..++..|+.|.++|+-|+||.++.. ..+..+.+.+..+. ++++...+.-++.-++.+.......+++.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP 152 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLP 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 6778888889999999999999999977666654 44455566665553 34544455566666778888888999999
Q ss_pred hhcCCCcc--------------------------hhHHHHHHHHHHHHHHHHHhhcccccccchh-------hHHHHHHH
Q 016986 168 EVSPPFVR--------------------------GTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICFWVS 214 (379)
Q Consensus 168 ~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-------wr~~f~~~ 214 (379)
|..+++++ ++..+.-.....+|.++..++.-.+....+. -|..+.+.
T Consensus 153 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~ 232 (477)
T PF11700_consen 153 DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIV 232 (477)
T ss_pred hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHH
Confidence 99999888 8888887777778877766654443322111 47888877
Q ss_pred HHHHHHHHH-HHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHH
Q 016986 215 IVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (379)
Q Consensus 215 ~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
++.-++..+ .++++||.|+....++.........+++ ...++++.+.|.....++.
T Consensus 233 a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l-----------------------~~t~k~~~~~~~~~~fLia 289 (477)
T PF11700_consen 233 ALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL-----------------------WRTFKEIRKLRQLFLFLIA 289 (477)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH-----------------------HHHHHHHHhChHHHHHHHH
Confidence 777655544 4566787754210011111111111111 2245566667777788888
Q ss_pred HHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCch--HHHHHHHHHHHHHH
Q 016986 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK--ALLQWSFFSMVICS 365 (379)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~i~~ 365 (379)
.+++.-...+.......|....++.+..+.....+...+.+++|.++.|++.||+|.| +.+..+.++..+..
T Consensus 290 ~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~ 363 (477)
T PF11700_consen 290 YFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIP 363 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 8887777777777788888888888777777888899999999999999999999998 77766665554333
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=1.8e-15 Score=137.04 Aligned_cols=160 Identities=13% Similarity=0.129 Sum_probs=127.1
Q ss_pred chhhhhhhhccCCcc------hhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc----ch
Q 016986 72 EPLESISLDLGFNGN------TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR----NL 141 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~------~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 141 (379)
...+...++.|.+.. ....+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 444555566654421 12237888899999999999999999999999999999999988876666532 24
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHH-HHHHHHHHHHHhhcccccccch-----hhHHHHHHHH
Q 016986 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAG-----WWRICFWVSI 215 (379)
Q Consensus 142 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~-----~wr~~f~~~~ 215 (379)
+.+++.+++.|++.+...+....++.|++|+++|+++.++.+ ...++|.++||.++|.+.++.+ +|+..|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 567778999999999888888999999999999999999997 6788999999999999987632 2999999877
Q ss_pred HHHHHHHHH-HhhcCCC
Q 016986 216 VPAAILCLA-MVFCAES 231 (379)
Q Consensus 216 ~~~~~~~~~-~~~~~e~ 231 (379)
+..++..++ .++++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 776665554 4556665
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.63 E-value=2.9e-15 Score=134.24 Aligned_cols=147 Identities=18% Similarity=0.098 Sum_probs=123.9
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccch--HHHHHHHH
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRF 149 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~ 149 (379)
...+.+.++++.+.++. +++.+.+.++..++.++.|+++||+|||+.+..+.++..++.++..+.++. ..+++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFL--VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 34455667788765555 788999999999999999999999999999999999888888877777643 23445678
Q ss_pred HHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHH
Q 016986 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 221 (379)
+.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |++.|.+.++..++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHh
Confidence 88888888888888899999999999999999999999999999999999998888 999998877665554
No 126
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.61 E-value=7.5e-13 Score=112.29 Aligned_cols=264 Identities=17% Similarity=0.190 Sum_probs=161.2
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
+|+.-.+-+++|++..++ +.+....+....+..++.|.++||+|||+.-+..+++.+++++ +-.+++++.++++|++
T Consensus 54 GpY~Y~LY~~yg~~~~qI--a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvl 130 (354)
T PF05631_consen 54 GPYLYALYESYGFSEHQI--AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVL 130 (354)
T ss_pred cchhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHH
Confidence 566666667899988887 7888888889999999999999999999999999999999886 5667899999999999
Q ss_pred HHhhhchhhHHHHHHHH-hhcCCCcc----hhHHHHHH-HHHHHHHHHHHhhcccccccchh-hHHHHHHHHHHHHHHHH
Q 016986 151 VGTGMGLGPTVAALYVT-EVSPPFVR----GTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCL 223 (379)
Q Consensus 151 ~G~~~~~~~~~~~~~i~-~~~~~~~r----~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~-wr~~f~~~~~~~~~~~~ 223 (379)
.|++.+.....-.++.. |.-..+.+ +.-.+... ...++-.+++.+++..+.+..+. -..+|..+.+..++..+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 99999999888766654 44322212 22222112 12222234444455555544331 36788887777666655
Q ss_pred HHh-hcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHh
Q 016986 224 AMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (379)
Q Consensus 224 ~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
+.. ..+|.+.. ..+..+..+. ....++.+.+||+.+.+-+...++ ..
T Consensus 211 ~I~~~W~ENyg~---~~~~~~~~~~--------------------------~~~a~~~i~~d~ril~LG~~qslF---E~ 258 (354)
T PF05631_consen 211 LILKTWPENYGD---TSSSSSLSGS--------------------------FREAWRAILSDPRILLLGLIQSLF---EG 258 (354)
T ss_pred HHHhcccccCCC---cccccchHHH--------------------------HHHHHHHHHcCchhHHHHHHHHHH---HH
Confidence 543 34554210 0000000000 012344566667666554433333 33
Q ss_pred hchhHHHHhHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHh-hCchHHHHHHHHHHHHHHHHHH
Q 016986 303 SGINAIFYFSSSVFK-SAGLSSGLANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
+.+..+..|.|.... ..+..-|+++..+.++.++|+.+..++..+ ......+.....+.++++.+-.
T Consensus 259 smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l~~pv 327 (354)
T PF05631_consen 259 SMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSLAIPV 327 (354)
T ss_pred HHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444322 223456899999999999999888765554 3333444444444444444333
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.61 E-value=1.8e-14 Score=127.72 Aligned_cols=163 Identities=22% Similarity=0.341 Sum_probs=141.8
Q ss_pred HHhhhhccccchhhhhhhhc-cCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHH-HHHHHhHHHHHHHHHHhccc
Q 016986 62 LFGYHLGVVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR-AFQLCALPMIIGASISATTR 139 (379)
Q Consensus 62 ~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~-~l~~~~~~~~~~~~~~~~~~ 139 (379)
.............|.+.++. |.+..+. ++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 186 LLSFGYYGLLTYLPLYLQEVLGLSAAEA--GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHhHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 33334444455666666654 7766555 89999999999999999999999999999 99999999999999999999
Q ss_pred chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
+.+.+.+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |+..|++.++..+
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~ 342 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALAL 342 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998877 8999999888877
Q ss_pred HHHHHHhh
Q 016986 220 ILCLAMVF 227 (379)
Q Consensus 220 ~~~~~~~~ 227 (379)
+..+..++
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 77665543
No 128
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.61 E-value=8.1e-14 Score=124.52 Aligned_cols=226 Identities=14% Similarity=0.068 Sum_probs=148.9
Q ss_pred chhhhhHhHHhhhccccCCCCCcccchhhh-hccCCcc-cc----cCCCccchhHHHHHHHHHHHHHHhhhhccccchhh
Q 016986 2 WGRQREASMMYKRTSSRDRSSTFDVEETTA-LVQNGTE-VE----NTNPSWKLSFPHVLVATLSSFLFGYHLGVVNEPLE 75 (379)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (379)
+++.+|+++..+..+..+++++...+...+ ..++.++ .+ +.-.++..++.....+.+......-+...+..+..
T Consensus 215 k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst 294 (485)
T KOG0569|consen 215 KGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYST 294 (485)
T ss_pred cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHH
Confidence 678889999988887665444332221111 1111111 11 00111122232222222222222233445666778
Q ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc---chH------HHHH
Q 016986 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR---NLI------GMLL 146 (379)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~l~~ 146 (379)
.+-++-|++.++. .+......+...+..+.+..+.||+|||+.++.++.+..+..+++.... +.. ..++
T Consensus 295 ~i~~~aG~~~~~a--~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 295 SIFKTAGFTPEEA--QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 8889999988877 5788888888999999999999999999999999999888887766441 111 1233
Q ss_pred HHHHHHhhhch-hhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH-H
Q 016986 147 GRFVVGTGMGL-GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL-A 224 (379)
Q Consensus 147 ~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~-~ 224 (379)
+.++..++.+. ..|+..-+.+|.+|++.|+.++++......+..++-...-..+.+..|. +.|+...++.++..+ .
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~ 450 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYL 450 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHH
Confidence 34443333333 3567888999999999999999999999999988888887888777773 666666666665554 4
Q ss_pred HhhcCCC
Q 016986 225 MVFCAES 231 (379)
Q Consensus 225 ~~~~~e~ 231 (379)
+..+|||
T Consensus 451 ~~~lPET 457 (485)
T KOG0569|consen 451 YRYLPET 457 (485)
T ss_pred HHhCccc
Confidence 5679999
No 129
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.60 E-value=4.7e-14 Score=126.59 Aligned_cols=156 Identities=12% Similarity=-0.004 Sum_probs=132.1
Q ss_pred hhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHH
Q 016986 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (379)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 144 (379)
..........|.+.+|.|.+.... |++.++..++..++.++.+++.||+|+|+.+.++.+...+..+..+++++.+.+
T Consensus 219 ~~~~~~~~~~~~~l~~~g~s~~~~--g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 296 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQAAGISASAT--GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLI 296 (382)
T ss_pred HHHHHHHHHHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHH
Confidence 333334446666667788877666 888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHH-HHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 016986 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 145 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
++.+++.|+..+...+....++.+. |+++|+++.++++ ...++|..+++.++|.+.++.+ + ..|++.+..+++.++
T Consensus 297 ~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 9999999999986 5788999999999999999887 5 556665555555444
Q ss_pred HH
Q 016986 224 AM 225 (379)
Q Consensus 224 ~~ 225 (379)
+.
T Consensus 374 ~~ 375 (382)
T TIGR00902 374 LI 375 (382)
T ss_pred HH
Confidence 33
No 130
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.59 E-value=2.3e-14 Score=131.37 Aligned_cols=164 Identities=10% Similarity=0.049 Sum_probs=128.9
Q ss_pred HHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc--chhHHHHHH--HhHHHHHHHH
Q 016986 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG--VGRRRAFQL--CALPMIIGAS 133 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~--~Grr~~l~~--~~~~~~~~~~ 133 (379)
...++...........+|.+.++.|.+..+. +++.++..++..++.++.|+++|| +++|+...+ +.++.+++.+
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l 325 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKDKGVDEYEA--AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL 325 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444456677777888876666 899999999999999999999997 344433333 4444455556
Q ss_pred HHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
+....++++.+++.+++.|++.+...+...+++.|.+|++++++..++++....+|.++||.+++.+.+..++|++.|++
T Consensus 326 l~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 326 LCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHH
Confidence 66778899999999999999999999999999999999999999999999999999999999999998876548999988
Q ss_pred HHHHHHHHHH
Q 016986 214 SIVPAAILCL 223 (379)
Q Consensus 214 ~~~~~~~~~~ 223 (379)
.++..++..+
T Consensus 406 ~~~~~li~~~ 415 (455)
T TIGR00892 406 SGSIVVSAGL 415 (455)
T ss_pred hhHHHHHHHH
Confidence 7776655443
No 131
>PRK12382 putative transporter; Provisional
Probab=99.59 E-value=5.1e-14 Score=126.97 Aligned_cols=151 Identities=17% Similarity=0.145 Sum_probs=128.0
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
....|.+.++.+.+ +. ++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++..++
T Consensus 236 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 236 GTFVSLYFASKGWA--MA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHhcCCc--hh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 34445555565653 23 566677888888999999999999999999999999988888888888888888889999
Q ss_pred HHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHh
Q 016986 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (379)
Q Consensus 151 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 226 (379)
.|++.+...+.....+.|.+|+++|+++.++++....+|..++|.+.+.+.++.| |++.|.+.++..++..+..+
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 9999998888888889999999999999999999999999999999999999888 99999998777766655544
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.57 E-value=8.7e-14 Score=124.73 Aligned_cols=149 Identities=19% Similarity=0.286 Sum_probs=124.0
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhc
Q 016986 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 156 (379)
+.+++|.+..+. +++.+.......++.++.|++.||+|||+++..+.++..+..+...+.++.+.+++.+++.|++.+
T Consensus 226 ~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 226 IIHELGLPDKLA--GLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788876665 777777777777888999999999999999988877766666666677888888888999999998
Q ss_pred hhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcC
Q 016986 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCA 229 (379)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 229 (379)
...+....++.|..|+ +++++.++++....+|..++|.+++.+.+..+ |+..|++.++..++..+...+++
T Consensus 304 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 304 ILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheec
Confidence 8888888999999875 56799999999999999999999999988888 89999988887777766665554
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=4.6e-14 Score=128.06 Aligned_cols=156 Identities=15% Similarity=0.129 Sum_probs=128.5
Q ss_pred cchhhhhhhhccCCcch--hHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~--~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 148 (379)
.+..+.+..+.+.+.++ ...+.+.+++.++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILR 318 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 44455554443322222 1235667777888889999999999999999999999888888888888888888888999
Q ss_pred HHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhh
Q 016986 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF 227 (379)
Q Consensus 149 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 227 (379)
++.|++.+...+....++.+..|+++|++.+++.+....+|..+||.+++.+.+..+ |++.|++.++..++..+..++
T Consensus 319 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 319 FLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998888 899999988777776655443
No 134
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.55 E-value=2.2e-13 Score=126.72 Aligned_cols=163 Identities=12% Similarity=0.022 Sum_probs=107.4
Q ss_pred cccchhhhhhhhccCCcchhH---------HHH-HHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc
Q 016986 69 VVNEPLESISLDLGFNGNTLA---------EGL-VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (379)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~---------~~~-~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 138 (379)
......|.+.++.|.+..+.. ... ...+..++..++.++.++++||+|||++++.+.++.+++.++.++.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 344457777788887643210 001 2333445666788899999999999999998888777776655543
Q ss_pred c----chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch---------
Q 016986 139 R----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG--------- 205 (379)
Q Consensus 139 ~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--------- 205 (379)
. +...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.+++|.+.+.+.+..+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 2 111111111112222223345666778999999999999999999999999999999988876421
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 206 WWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
++...|++.++..++..+..+++||+
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~~~lpEt 491 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFTLLIPET 491 (502)
T ss_pred cchHHHHHHHHHHHHHHHHheEeccC
Confidence 13556666666666555555677887
No 135
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.55 E-value=1.9e-12 Score=111.66 Aligned_cols=266 Identities=17% Similarity=0.117 Sum_probs=180.9
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch-----hHHHHHH-HhHHHHHHHHHHhcc-----c------
Q 016986 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQL-CALPMIIGASISATT-----R------ 139 (379)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~------ 139 (379)
+..|+++...-. +.+.+...+. ....+.+|+.||+.+ ||..+++ |......+..+..++ .
T Consensus 6 MIvEL~vpA~lv--~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGVPAWLV--ALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhccHHHHH--HHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 456777754433 6666666554 457899999999999 8866665 666666655554432 2
Q ss_pred --ch-H--HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Q 016986 140 --NL-I--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (379)
Q Consensus 140 --~~-~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~ 214 (379)
.+ + ...+...+.|+|.+...+...++++|..|+|+|+++.++......+|.+++..+.+.+.+.+..-|..-.+.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 22 2 233457788999999999999999999999999999999999999999999999887776654334333332
Q ss_pred HHH--HHHHHHHHhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHH
Q 016986 215 IVP--AAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (379)
Q Consensus 215 ~~~--~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (379)
... .+...++..+-.|.+.. ++ .+ ..++++......++++..+|..+.++.
T Consensus 163 ~~a~i~~~l~~ia~wg~E~r~~----~~-~~----------------------~~~~~~~~f~~a~~~~~~~~~a~~f~~ 215 (403)
T PF03209_consen 163 GVALIALLLNLIALWGQEPRRS----RR-AA----------------------AAERPRPPFREAWRQVWASPQARRFFV 215 (403)
T ss_pred HHHHHHHHHHHHHHHhcccCCc----cc-cc----------------------CCCCCCccHHHHHHHHHhCCChhHHHH
Confidence 222 22222222333333110 00 00 001122333456778888898888887
Q ss_pred HHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH-hhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
..++....++..-..+-.|--++++.+..+...+....+.+..+|....|++.. |.++++...+++..+.+++.++.+.
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 777777666665556666667777777666778889999999999999998776 5777888888888888887776654
Q ss_pred H
Q 016986 372 E 372 (379)
Q Consensus 372 ~ 372 (379)
.
T Consensus 296 ~ 296 (403)
T PF03209_consen 296 G 296 (403)
T ss_pred H
Confidence 3
No 136
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.55 E-value=1.1e-12 Score=115.43 Aligned_cols=173 Identities=18% Similarity=0.234 Sum_probs=138.0
Q ss_pred HHHHHHHHHHhhhhc-cccchhhhhhhhcc----CCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhHH
Q 016986 54 LVATLSSFLFGYHLG-VVNEPLESISLDLG----FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALP 127 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~----~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~ 127 (379)
..++..-+-..+... +-+...-++..+++ ++++++ .-+.++|..-.-+...++|+++|| +|+|+.+..|.++
T Consensus 24 ~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail 101 (498)
T COG3104 24 YLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAIL 101 (498)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 344444454444432 22334444555555 877766 556667766666888999999999 5999999999999
Q ss_pred HHHHHHHHhccc--chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC--CcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 128 MIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP--FVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 128 ~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
+.+|.++.+.+. +...+.++-.+.++|.|..-+...++++|.+|+ .+|-...++++++.++|++++|++.+++.+.
T Consensus 102 ~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~ 181 (498)
T COG3104 102 MAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN 181 (498)
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh
Confidence 999999999884 788999999999999999999999999999975 3467788999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhcC
Q 016986 204 AGWWRICFWVSIVPAAILCLAMVFCA 229 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~~~~~~~~ 229 (379)
.+ |...|..+++-....++.++..+
T Consensus 182 ~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 182 YG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred hC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 99 99999998888777777665544
No 137
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.54 E-value=6.2e-14 Score=126.45 Aligned_cols=157 Identities=18% Similarity=0.146 Sum_probs=117.7
Q ss_pred HHHHhhhhccccchhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH--HHHh
Q 016986 60 SFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA--SISA 136 (379)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~--~~~~ 136 (379)
.+.............|.+. +++|.+.++. +...+...++..++.++.|+++||+|||+.+..+..+..+.. +...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSA--LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334445566655 6778876665 788888999999999999999999999998776554443332 2222
Q ss_pred c--ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHH-HHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 137 T--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 137 ~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
+ .++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++ ++.+..+|..++|.+++.+.++.+.|++.++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 2 35667777788899998888999999999999999999999998 45667788999999999999887757777666
Q ss_pred HHHHH
Q 016986 214 SIVPA 218 (379)
Q Consensus 214 ~~~~~ 218 (379)
.+...
T Consensus 386 ~~~~~ 390 (394)
T TIGR00883 386 LAALA 390 (394)
T ss_pred HHHHH
Confidence 55443
No 138
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.54 E-value=1.7e-13 Score=126.39 Aligned_cols=171 Identities=16% Similarity=0.122 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~ 131 (379)
+....+..++...........+|. +.+++|++..+. ++..+.+.++..++.+++|+++||+|||+.++....+..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDA--INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 334444444444443334556675 456789887766 78889999999999999999999999998776654444333
Q ss_pred H--HHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHH-HHHHHHhhcccccc------
Q 016986 132 A--SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKE------ 202 (379)
Q Consensus 132 ~--~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~------ 202 (379)
. +.....++...+.+.+++.|++.............|.+|+++||.+.|+.+....+ |..++|.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 2 22334456666777888888654443333346777999999999999999888776 77899999998888
Q ss_pred ------cchhhHHHHHHHHHHHHHHHHHHh
Q 016986 203 ------IAGWWRICFWVSIVPAAILCLAMV 226 (379)
Q Consensus 203 ------~~~~wr~~f~~~~~~~~~~~~~~~ 226 (379)
..+ |+..|++..+..++..+..+
T Consensus 418 ~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 418 PIFGYTLTG-WAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ccccccccC-hHHHHHHHHHHHHHHHHHHH
Confidence 456 99999887666666555444
No 139
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.54 E-value=3.3e-13 Score=125.11 Aligned_cols=159 Identities=18% Similarity=0.065 Sum_probs=114.4
Q ss_pred ccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc--cc-hH-HHH
Q 016986 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RN-LI-GML 145 (379)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~-~~-~l~ 145 (379)
.....|.+.++.|.+.... .+......++..++.++.|+++||+|||++++.+.++.+++.++.+.. ++ .. ...
T Consensus 290 ~~~~~p~i~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIA--LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHHHHHcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 3456688888888876655 566667778888999999999999999999999999988887776533 12 11 222
Q ss_pred HHHHHHHhhhch-hhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcc------cccccchhhHHHHHHHHHHH
Q 016986 146 LGRFVVGTGMGL-GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI------PVKEIAGWWRICFWVSIVPA 218 (379)
Q Consensus 146 ~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~------~l~~~~~~wr~~f~~~~~~~ 218 (379)
.+-++.+.+.+. ..+....+++|.+|+++|++++++......+|.++++.+.+ ++.+..+ |++.|++.++..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 446 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHH
Confidence 233444444433 33667899999999999999999999998888888765544 3334556 788888876666
Q ss_pred HHHHHHH-hhcCCC
Q 016986 219 AILCLAM-VFCAES 231 (379)
Q Consensus 219 ~~~~~~~-~~~~e~ 231 (379)
++..+.. ++.||+
T Consensus 447 ~~~~~~~~~~~~e~ 460 (479)
T PRK10077 447 VLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHhccccC
Confidence 6555544 446666
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.54 E-value=1.4e-13 Score=124.16 Aligned_cols=168 Identities=18% Similarity=0.152 Sum_probs=116.6
Q ss_pred HHHHHHHHHhhhhccccchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHH--HH------HHHh
Q 016986 55 VATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR--AF------QLCA 125 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~--~l------~~~~ 125 (379)
...+..++............|.+ .+++|.+..+. +++.+...++..++.++.|+++||+|||+ .. ..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA--GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAG 296 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Confidence 33344444444444445555655 45677766555 88899999999999999999999999996 11 1111
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
++..+........++....+....+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 297 LVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 1122222222223344444444445454444 788899999999999999999999999999999999999999998876
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 016986 206 WWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~ 225 (379)
.|+..|++.++..++..+..
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 376 SFAGALMVVAALALIGALSY 395 (399)
T ss_pred chhHHHHHHHHHHHHHHHHH
Confidence 57888888777666655444
No 141
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.54 E-value=9.3e-14 Score=128.64 Aligned_cols=174 Identities=15% Similarity=0.007 Sum_probs=127.7
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
...+..+.............|.+.+++|.+..+. ++......++..++.++.|+++||+|||+.+..+.++.+++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 365 (481)
T TIGR00879 288 GVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHA--FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFV 365 (481)
T ss_pred HHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 3333334333334445566788888889887555 78888889999999999999999999999999998888877766
Q ss_pred Hhc-----cc------chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 135 SAT-----TR------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 135 ~~~-----~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
.++ .+ +...+....++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 366 LGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred HHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 652 11 2333333333333323334456667889999999999999999999999999999999988888
Q ss_pred chhhHHHHHHHHHHHHHHHHHH-hhcCCC
Q 016986 204 AGWWRICFWVSIVPAAILCLAM-VFCAES 231 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~~~~-~~~~e~ 231 (379)
.+ |++.|++.++.+++..+.. ++.||+
T Consensus 446 ~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 446 IG-VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred cC-ccceehhHHHHHHHHHHHHheecccC
Confidence 77 8999988777766665554 445665
No 142
>PRK09952 shikimate transporter; Provisional
Probab=99.52 E-value=4.8e-13 Score=122.16 Aligned_cols=154 Identities=16% Similarity=0.123 Sum_probs=112.0
Q ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc---c-cchHHHHHHHHHH
Q 016986 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---T-RNLIGMLLGRFVV 151 (379)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~ 151 (379)
.+.+++|.+.+.. ..+.........++.+++|+++||+|||++++.+.++..++.+.... . ++...+++..++.
T Consensus 276 y~~~~~g~s~~~~--~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 276 YSTQNLGLPRELF--LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred HHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 3456678765543 34455556667788899999999999999998887765554433222 2 2344445566777
Q ss_pred HhhhchhhHHHHHHHHhhcCCCcchhHHHHH-HHHHHHHHHHHHhhcccccccc-hhhHHHHHHHHHHHHHHHHHHhhcC
Q 016986 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLAMVFCA 229 (379)
Q Consensus 152 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~ 229 (379)
|++.+...+...++++|.+|.+.|+.+.++. ..+..+|..++|.+.+.+.+.. ++|+..+.+.++..++..+..+.++
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 8888888888899999999999999888885 4455688899999999887643 3388888877777777766666666
Q ss_pred CC
Q 016986 230 ES 231 (379)
Q Consensus 230 e~ 231 (379)
|+
T Consensus 434 ~~ 435 (438)
T PRK09952 434 DN 435 (438)
T ss_pred cc
Confidence 64
No 143
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.52 E-value=1.9e-13 Score=124.36 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=131.8
Q ss_pred cchhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHH
Q 016986 71 NEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (379)
Q Consensus 71 ~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 149 (379)
....|.+.++ +|.+.... +++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++.++.++.+.+.++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQI--GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCCChhHh--HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3456666666 88876665 89999999999999999999999988888888888888888888888898888888899
Q ss_pred HHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH-HHHHHhhc
Q 016986 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI-LCLAMVFC 228 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~-~~~~~~~~ 228 (379)
+.|++.+...+...+++.|..|++.|+++.+++.....+|..+|+.+.+.+.+..| ++..++..+...++ ..+....+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhc
Confidence 99998888888888999999999999999999999999999999999999999888 67777765544444 44445556
Q ss_pred CCC
Q 016986 229 AES 231 (379)
Q Consensus 229 ~e~ 231 (379)
++.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 665
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.51 E-value=4.6e-13 Score=120.21 Aligned_cols=149 Identities=13% Similarity=0.128 Sum_probs=120.7
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHH
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 151 (379)
..+|.+.++.|.+.++. ++..+.+.++..+++++.|++.||+|+|+++..+.+...++.+... + ........++.
T Consensus 221 ~~lp~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGMSDASI--GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 45677777778776665 8888899999999999999999999999999888888777665443 2 23344567788
Q ss_pred HhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHh
Q 016986 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (379)
Q Consensus 152 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 226 (379)
|++.....|.....+.|..|+++++...+......++|.++||.+++.+.++.+ |++.|.+.+...++..+..+
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHH
Confidence 887777889999999999998888888888888999999999999999999888 89999887777665554444
No 145
>TIGR00895 2A0115 benzoate transport.
Probab=99.51 E-value=3.2e-13 Score=121.97 Aligned_cols=134 Identities=19% Similarity=0.174 Sum_probs=108.4
Q ss_pred hhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHH
Q 016986 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (379)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 144 (379)
..........|.+.+++|.+.++. ++..+...++..++.++.|+++||+|||+.+....+......++....++.+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (398)
T TIGR00895 264 VGVYFLTNWLPKLMVELGFSLSLA--ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLL 341 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 333344556677888888876666 888999999999999999999999999955544444433333333336677778
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccc
Q 016986 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (379)
Q Consensus 145 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (379)
++..++.|++.+...+...+++.|.+|+++|+++.++......+|..++|.++|.+
T Consensus 342 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 342 LLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 88889999999999999999999999999999999999999999999999998865
No 146
>PRK03699 putative transporter; Provisional
Probab=99.51 E-value=5.9e-13 Score=120.08 Aligned_cols=155 Identities=12% Similarity=0.073 Sum_probs=126.6
Q ss_pred ccchhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHH
Q 016986 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (379)
Q Consensus 70 ~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 148 (379)
+....|.+. +++|.+..+. +++.+.+.++..++.++.|+++||+|||+.+..+..+..+..++....++...+.+..
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDA--GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAI 301 (394)
T ss_pred HHHHHHHHHHHHcCCChHHh--hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 344566655 6678887766 8899999999999999999999999999999988887777777777778887777788
Q ss_pred HHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 149 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
++.|++.+..++...++..|..| +++++..+.......+|..++|.+.+.+.+..| |+..+++.++..++..+....+
T Consensus 302 ~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 302 LGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHH
Confidence 88999888888888888888776 446788888888889999999999999999888 8999888766666655544443
No 147
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.50 E-value=1.1e-12 Score=118.10 Aligned_cols=160 Identities=17% Similarity=0.149 Sum_probs=123.2
Q ss_pred cccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc-chHHHHHH
Q 016986 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLIGMLLG 147 (379)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~ 147 (379)
......|.+.+++|.+..+. +...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+ .
T Consensus 223 ~~~~~lp~~l~~~g~s~~~a--g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 298 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYS--GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--W 298 (393)
T ss_pred HHHHHHHHHHHHcCCChhhh--hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--H
Confidence 33445666667788876666 8999999999999999999999999999999998887777766554333 32222 2
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH-H
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-M 225 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~ 225 (379)
-++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..|.|...|.+.++..++..+. .
T Consensus 299 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 299 AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 346688888888877777777775 57899999999999999999999999999998776888888877666665554 4
Q ss_pred hhcCCCh
Q 016986 226 VFCAESP 232 (379)
Q Consensus 226 ~~~~e~p 232 (379)
.+.||++
T Consensus 379 ~~~~~~~ 385 (393)
T PRK09705 379 RFAPARF 385 (393)
T ss_pred Hhccccc
Confidence 4566653
No 148
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=1.9e-12 Score=116.73 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=119.4
Q ss_pred hhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH-HHHhcccchHHHHHHHHHHH
Q 016986 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA-SISATTRNLIGMLLGRFVVG 152 (379)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G 152 (379)
.|.+.++.|.+.++. +++.+.+.++..++.++.|+++||+|||++.. +..+..++. ......++.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFA--TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 344556678877666 88899999999999999999999999887654 444444443 34456678888888899999
Q ss_pred hhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhh
Q 016986 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF 227 (379)
Q Consensus 153 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 227 (379)
++.+...+.....+.|..| ++|++++++++....+|..+||+++|.+.++.+ ++..|++.++..++.++...+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHH
Confidence 9887777777788888876 578999999999999999999999999999998 899999988777776655443
No 149
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.50 E-value=3.6e-13 Score=122.05 Aligned_cols=140 Identities=21% Similarity=0.179 Sum_probs=112.7
Q ss_pred chhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH-HHhcccchHHHHHHHH
Q 016986 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATTRNLIGMLLGRF 149 (379)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~ 149 (379)
...|. +.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+.+..+.+...+..+ .....++.+.+.+..+
T Consensus 259 ~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTV--ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLF 336 (405)
T ss_pred hhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 34444 456788876666 8899999999999999999999999999999888776533332 3344566677777777
Q ss_pred HHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
+.|+..+...+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..|.|+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 7887777777788899999999999999999999999999999999999999987756665544
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.49 E-value=9.1e-13 Score=119.14 Aligned_cols=155 Identities=12% Similarity=0.073 Sum_probs=118.0
Q ss_pred cccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHH-HHhHHHHHHHHHHh-----cccchH
Q 016986 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASISA-----TTRNLI 142 (379)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~-~~~~~~~~~~~~~~-----~~~~~~ 142 (379)
......|.+.+++|.+..+. +++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+... ..++.+
T Consensus 240 ~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 317 (402)
T TIGR00897 240 GFAVFLPMFVAELGFSTSEW--LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFA 317 (402)
T ss_pred HHHHHHHHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHH
Confidence 34456777778888887666 78888889999999999999999999988764 33333333333322 234667
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHH
Q 016986 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (379)
Q Consensus 143 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 222 (379)
.+++..++.|++.+...+. ...+.|..| ++|+++.|+.+....+|..++|.+++.+.+..| |+..|++.++..++..
T Consensus 318 ~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 318 VALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHH
Confidence 7777888889888776554 456677655 589999999999999999999999999999888 8999888777776665
Q ss_pred HHHhhc
Q 016986 223 LAMVFC 228 (379)
Q Consensus 223 ~~~~~~ 228 (379)
+...|+
T Consensus 395 ~~~~~~ 400 (402)
T TIGR00897 395 FLTAFI 400 (402)
T ss_pred HHHHHh
Confidence 555543
No 151
>TIGR00898 2A0119 cation transport protein.
Probab=99.49 E-value=1e-12 Score=122.58 Aligned_cols=136 Identities=13% Similarity=0.006 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccch--HHHHHHHHHHHhhhchhhHHHHHHHHhhc
Q 016986 93 VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRFVVGTGMGLGPTVAALYVTEVS 170 (379)
Q Consensus 93 ~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 170 (379)
......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3444556677888999999999999999999999999888887776654 44555566777777778888899999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 171 PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 171 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
|++.|+.++|+.+....+|.+++|.+.+ +.+ .+ +...+.+.+...++..+..+++||+
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 9999999999999999999999999988 433 33 5667777777777776667788887
No 152
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.47 E-value=2.2e-12 Score=115.86 Aligned_cols=147 Identities=14% Similarity=0.072 Sum_probs=121.0
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHH
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 151 (379)
...|.+.+|.|.+.++. |.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+.+++.+.+++..++.
T Consensus 226 ~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (382)
T PRK11128 226 GFSAIYWQAAGYSASTI--GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH 303 (382)
T ss_pred HHHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 34455657788876665 8888888889999999999999999999999999999998888888899999999999999
Q ss_pred HhhhchhhHHHHHHHHhhcCCCcchhHHHHHH-HHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 016986 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 152 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
|++.+...+....++.+. +++++++..++++ ....+|..+||.++|.+.+..+ + ..|+..++..++.++
T Consensus 304 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 304 CGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 999999999998998887 5566788888876 6667888999999999999887 5 355555555544433
No 153
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.46 E-value=5.6e-13 Score=124.13 Aligned_cols=143 Identities=16% Similarity=0.071 Sum_probs=111.5
Q ss_pred cchhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc--cchHHHHHH
Q 016986 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLG 147 (379)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~ 147 (379)
...+|.+. +++|.+..+. +++.+.+.++..++.++.|+++||+|||++++.+.++..+..+..... .+.+.+.+.
T Consensus 295 ~~~lp~~l~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTV--ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred HHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 34567666 5888877666 899999999999999999999999999999988877766665544333 334444445
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHH
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~ 216 (379)
.++.+.......+....++.|.+|+++|++++++.+....+|..++|.+++.+.+..+ |+..+...+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~ 440 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSF 440 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHH
Confidence 5555443334455667889999999999999999999999999999999999999888 7887765443
No 154
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.45 E-value=3e-11 Score=104.15 Aligned_cols=260 Identities=14% Similarity=0.095 Sum_probs=179.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH-HhHHHHHHHHHHhcccc--h-HHHHHHHHHHHhhhchhhHH
Q 016986 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL-CALPMIIGASISATTRN--L-IGMLLGRFVVGTGMGLGPTV 161 (379)
Q Consensus 86 ~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~-~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~ 161 (379)
.+..++...++..+..++.+|+.|.++|+.|+||..+. ...+..++.++..++++ + +..++...+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 34445788888889999999999999999997655554 55555566666666654 4 44455678888888888889
Q ss_pred HHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc--c-ccc---------------ccchhhHHHHHHHHHHHHHHHH
Q 016986 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG--I-PVK---------------EIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~-~l~---------------~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
..+++.+..++++-++..++-.....+|..+.-++. . ... +..+ =|..+.+.++.-++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-VRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-chhHHHHHHHHHHHHHh
Confidence 999999999988878777765555555544433331 0 000 2223 57888887777766665
Q ss_pred HHh-hcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHh
Q 016986 224 AMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (379)
Q Consensus 224 ~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
..+ ..++.++-. ...........++ -..+++++.++++...+++..+++.-...
T Consensus 215 Pm~~~v~~~~~~~--~~~~~~l~~g~k~-----------------------L~~t~k~i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 215 PMILNVHDAEKIS--SPPPTALRNGFKE-----------------------LKSTFKEIRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred HHHhccccccccc--ccchHHHHHHHHH-----------------------HHHHHHHHhcccchHHHHHHHHHHHhhHH
Confidence 544 455443210 0000111111111 12356777788888888888888877777
Q ss_pred hchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 303 SGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
+.......|....++.+..+..+......+.+++|+++.|++.||+|.|+++.++.++..+.++...+.
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~ 338 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL 338 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc
Confidence 777777777777778777777888888999999999999999999999999888888877777665543
No 155
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.45 E-value=4.6e-12 Score=114.03 Aligned_cols=303 Identities=17% Similarity=0.182 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHH----HHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC----LGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~----~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
.....++-.+..++.........+.....++.+....+ +...... .+...+.++..|.++||+|||..+....+.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~-~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLEN-GLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchh-hhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 34444455555555555555666666666655433332 3444444 567789999999999999999999999998
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhh--hchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 128 MIIGASISATTRNLIGMLLGRFVVGTG--MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
..+..+...+.. +| +.+ +.|+. .+.......++++|....++|...+++.+.....+..++|.+++.+.+..+
T Consensus 102 ~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~ 176 (463)
T KOG2816|consen 102 TILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG 176 (463)
T ss_pred HHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC
Confidence 888877776666 33 333 44433 334556678999999999999999999999999999999999999998877
Q ss_pred hhHHHHHHHHHHHHHHHHH-HhhcCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcc
Q 016986 206 WWRICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG 284 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (379)
.-..|.++.+..++..+. .+++||+.+. ++.++ .............. .........+..-.+
T Consensus 177 -~a~~f~ia~~~~~~~~~y~~~~l~Esl~~----~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 239 (463)
T KOG2816|consen 177 -IALVFLIAAASGILSLLYMLLFLPESLQE----KERSD--ATLRELTPGSLDSS----------HVADAFQSLTKVGPD 239 (463)
T ss_pred -chHHHHHHHHHHHHHHHHHhhccccccCc----ccccc--ccccccCCCcccch----------hhhhhhhhhcccCCC
Confidence 678888877777776654 4568887321 11110 00000000000000 000000011111112
Q ss_pred cchhHHHHHHHHHHHHHhhchh-HHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH-HHHHhhCchHHHHHHHHHHH
Q 016986 285 RHFRVVFIGSTLFALQQLSGIN-AIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAM-VLMDKLGRKALLQWSFFSMV 362 (379)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~ 362 (379)
|....+....++.......... ...+|+...++....+.+......++...++.++.. .+...++.|+.+..|...-.
T Consensus 240 r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~ 319 (463)
T KOG2816|consen 240 RLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEF 319 (463)
T ss_pred ccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHH
Confidence 2222222222222222221111 334555555565555666666777777778877666 67777888888889999999
Q ss_pred HHHHHHHHHHHhhhh
Q 016986 363 ICSSISLILEAFLVL 377 (379)
Q Consensus 363 i~~~~~~~~~~~~~~ 377 (379)
+......+.+..|..
T Consensus 320 ~~~~~~af~~~~w~~ 334 (463)
T KOG2816|consen 320 LQLLLFAFATETWMM 334 (463)
T ss_pred HHHHHHHHhccchhh
Confidence 988888888777654
No 156
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.44 E-value=4.7e-12 Score=115.20 Aligned_cols=180 Identities=16% Similarity=0.160 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHhhhh-ccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhH--HHHHHHhH
Q 016986 50 FPHVLVATLSSFLFGYHL-GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCAL 126 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~ 126 (379)
.+.+....++.++..-.. ++.......-.+++|++..+. ..+.-+..+...+|++++|++.||+|.| ++++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l--~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQL--IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 344444445544433333 333334444566899988776 5677777888899999999999999999 99999988
Q ss_pred HHHHHHHHHhc--------ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcc
Q 016986 127 PMIIGASISAT--------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (379)
Q Consensus 127 ~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 198 (379)
.+.+..+...+ .++.+.+.+.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||++-+
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776666555 6788889999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 199 PVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 199 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
.+.+..+.-|+.+....++.++.++++++++.+
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 999887767888888777777777777666654
No 157
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=8.8e-12 Score=114.47 Aligned_cols=154 Identities=18% Similarity=0.152 Sum_probs=104.6
Q ss_pred ccchhhhhhh-hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc--hhHHHH-HHHhHHHHHHHHHHh--cccchHH
Q 016986 70 VNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GRRRAF-QLCALPMIIGASISA--TTRNLIG 143 (379)
Q Consensus 70 ~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~--Grr~~l-~~~~~~~~~~~~~~~--~~~~~~~ 143 (379)
....+|.+.+ +.|.+.++. ++....+.++..++.++.|+++||+ |||+.. +....+..++.+... ...+...
T Consensus 272 ~~~~~P~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (452)
T PRK11273 272 ILDWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTV 349 (452)
T ss_pred HHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHH
Confidence 3456676655 468876665 7888888899999999999999999 555432 222233333332222 2334544
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHH
Q 016986 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM-GSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (379)
Q Consensus 144 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 222 (379)
.+++.++.|.+..........+..|.+|+++||++.|+.+....+|.. ++|.+.+.+.++.| |+..|++.+..+++.+
T Consensus 350 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~ 428 (452)
T PRK11273 350 DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAV 428 (452)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHH
Confidence 555555555543333333345678999999999999999888777754 57999999999888 8999988776666655
Q ss_pred HHHh
Q 016986 223 LAMV 226 (379)
Q Consensus 223 ~~~~ 226 (379)
+...
T Consensus 429 ~~~~ 432 (452)
T PRK11273 429 ILLI 432 (452)
T ss_pred HHHH
Confidence 5443
No 158
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.41 E-value=4.7e-12 Score=114.38 Aligned_cols=133 Identities=13% Similarity=0.052 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhc
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS 170 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 170 (379)
|.+.++..+...++.+..|++.||+|||+.+.++.++.++...+...++|.+.+++.+++.|++..........+..+..
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 78888888888999999999999999999999999998888888788899999999999999988777667777888888
Q ss_pred CCCcchhHHHH-HHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Q 016986 171 PPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (379)
Q Consensus 171 ~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 224 (379)
+++.++...+. ++....+|..+++.++|.+.+..| |+..|.+.++..++..++
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 88888887766 678899999999999999999888 899999877776655444
No 159
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.41 E-value=1.3e-10 Score=101.63 Aligned_cols=313 Identities=12% Similarity=0.065 Sum_probs=193.4
Q ss_pred HHHHHHHHHHhhhhccccchhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH
Q 016986 54 LVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 132 (379)
..+++-.|+..+-.. -....|.+.+. .|++.++.. .-+.-+..-.+....++...+.|..|.|++++++.+...+..
T Consensus 8 ~llc~~gf~~~frPs-EPfl~~yL~~~~kn~T~~qv~-~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~ 85 (412)
T PF01770_consen 8 LLLCLFGFFKEFRPS-EPFLTPYLTGPDKNFTEEQVN-NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITW 85 (412)
T ss_pred HHHHHHHHHHhcCCC-CccchHHHcCCccCCCHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 334444444433322 23344555554 788877765 455666666778888999999999999999999999999999
Q ss_pred HHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch-hhHHHH
Q 016986 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICF 211 (379)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~wr~~f 211 (379)
.+.-+.++...+-+..++-|++.+. ..+..+|+-...|+++-.++.+...++.-+|..++.++|..+....+ ..+...
T Consensus 86 ~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~ 164 (412)
T PF01770_consen 86 LLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLN 164 (412)
T ss_pred HHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 9999999999999999999997765 56777899888899988999999999999998888888887776332 156676
Q ss_pred HHHHHHHHHHHHHHhhcCCChhHHHHcCChHHHHH----HHHHHhCCCchhHHHHHHHhhhcCCC--------CCcchhh
Q 016986 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEA----EFEKLLGGSHVKSSLAELSKLDRGDD--------GDIVKFE 279 (379)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 279 (379)
++......+.++..+++|..++-..-+++..+... ..++.....+.. .+..+.++... .-..+++
T Consensus 165 ~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~ 241 (412)
T PF01770_consen 165 YISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESS---SSTEKSPSTESSSRKSVLRLLWKDFK 241 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccc---cccccCcccccchHHHHHHHHHHHHH
Confidence 77666666666667778876542222222111000 000000000000 00000000000 0122345
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHc------CCChhHHHHHHHHHHHHHHHHHHHHHHhhCchH-
Q 016986 280 ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA------GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKA- 352 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~- 352 (379)
+..+++......+.-.+..+. ......|.+...+.. ..-.|.+-+...+.+.++.+..|++..++.+..
T Consensus 242 ~~y~~~~ll~WSlWWa~atcg----y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~ 317 (412)
T PF01770_consen 242 SCYSNPRLLLWSLWWAFATCG----YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGE 317 (412)
T ss_pred HHhcCchHHHHHHHHHHHHhH----HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHH
Confidence 556677665544433333333 333444555444443 112457777788888888999999866666543
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhh
Q 016986 353 -LLQWSFFSMVICSSISLILEAFLV 376 (379)
Q Consensus 353 -~~~~~~~~~~i~~~~~~~~~~~~~ 376 (379)
.+....++.+...+++...++.|.
T Consensus 318 l~l~~~S~l~a~~L~lm~~t~~Iwv 342 (412)
T PF01770_consen 318 LALGVFSLLQAGLLFLMSFTGNIWV 342 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 333444555555666666655553
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=1.9e-12 Score=115.56 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=115.1
Q ss_pred chhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccc-hHHHHHHHH
Q 016986 72 EPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN-LIGMLLGRF 149 (379)
Q Consensus 72 ~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~ 149 (379)
...|.+.++ +|.+..+. +++.+...++..++.++.+++.||+|||+.+..+..+.+++.++..+.++ .+.+++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHY--GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Confidence 455666655 78776665 89999999999999999999999999999999888888888888887774 888888999
Q ss_pred HHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc
Q 016986 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (379)
+.|++.+...+...+++.|..|+++|+++.++.+....+|..+++.+++.+.+..
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999887653
No 161
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.39 E-value=9.7e-12 Score=113.58 Aligned_cols=163 Identities=22% Similarity=0.160 Sum_probs=109.2
Q ss_pred HHHHhhhhccccchhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc--h-hHHHHHH---HhHHHHHHH
Q 016986 60 SFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--G-RRRAFQL---CALPMIIGA 132 (379)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~--G-rr~~l~~---~~~~~~~~~ 132 (379)
.+........+...+|.+. +++|.+..+. ++..+.+.++..++.++.|+++||+ + ||+.... +.+...+..
T Consensus 252 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK11663 252 YVLVYVVRAAINDWGNLYMSETLGVDLVTA--NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHH--HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH
Confidence 3333333334445566555 6678877666 7889999999999999999999999 3 3332222 222222222
Q ss_pred HHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHH
Q 016986 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (379)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~ 212 (379)
.... ..+...+.+..+..|++.............|.+|+++|++++|+.+....+|..++|.+.+.+.+..| |+..|+
T Consensus 330 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~ 407 (434)
T PRK11663 330 WLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFV 407 (434)
T ss_pred HHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHH
Confidence 2222 23333333444445543332233344677899999999999999999999999999999999999888 999998
Q ss_pred HHHHHHHHHHHHHh
Q 016986 213 VSIVPAAILCLAMV 226 (379)
Q Consensus 213 ~~~~~~~~~~~~~~ 226 (379)
+.++..++..+...
T Consensus 408 ~~~~~~~~~~~~~~ 421 (434)
T PRK11663 408 VISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777666555443
No 162
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=1.1e-11 Score=114.58 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=108.7
Q ss_pred hccccchhhhhhh-hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc---cchH
Q 016986 67 LGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---RNLI 142 (379)
Q Consensus 67 ~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~ 142 (379)
........|.+.+ .+|.+.... ++....+.++..++.++.|++.||+|||+++..+..+.++..++..+. ++.+
T Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
T PRK10504 277 SGMLPFMTPVFLQIGLGFSPFHA--GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYY 354 (471)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 3334445666555 467665555 788888888888888999999999999999999988888776665543 3444
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 143 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
.+.+..++.|++.+...+....+..+..|+++|+.+.++.+....+|..+|+.+++.+.+..+
T Consensus 355 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 355 LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455567888898888888889999999999999999999999999999999999887766544
No 163
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.38 E-value=1.7e-10 Score=106.81 Aligned_cols=155 Identities=17% Similarity=0.229 Sum_probs=118.7
Q ss_pred hhhhhhhccCCcchhHHHHHHH-HHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH---Hhcc-cchHHHHHHH
Q 016986 74 LESISLDLGFNGNTLAEGLVVS-MCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SATT-RNLIGMLLGR 148 (379)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s-~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~---~~~~-~~~~~l~~~r 148 (379)
.|.+.+++|.+.++. ++... ...++..++.++.|+++||+|+|+.+.++.++.++..+. .+.. ++...+.+.-
T Consensus 246 ~~~l~~~~G~s~~~~--g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 246 TTFLIRGVGFDAGEV--GLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 344556788887776 78764 556789999999999999999998887766655544332 2333 4555555566
Q ss_pred HHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 149 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
+++.++.|...+...++..+..+++.+++..++.+....+|..+++.+.|.+.+..| |+..|.+.++.+++.++...++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666667778899999999999999999999999998888888999998888 9999998888887776666555
Q ss_pred CCC
Q 016986 229 AES 231 (379)
Q Consensus 229 ~e~ 231 (379)
+++
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 543
No 164
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=1.1e-11 Score=114.10 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=132.7
Q ss_pred cchhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHH
Q 016986 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (379)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 149 (379)
...+|.+. +++|.+.... |++.+++.+|..+++++.+++.+|+++++++..+.+.++++.+..+++++.+..++.-+
T Consensus 238 ~aLlPl~a~~~l~~~a~~y--Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~ 315 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGY--GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALF 315 (524)
T ss_pred HHhhhHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 44567665 4577765555 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
+.|++.....+...+.+.+..|++.|||.++++++....+..+|..+.|.+.+..| -+..+.++++..++..++.
T Consensus 316 l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 316 LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999999999999999999999999999888 6888877666554444443
No 165
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.37 E-value=1.2e-11 Score=113.25 Aligned_cols=115 Identities=19% Similarity=0.146 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-cchHHHHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
+++.++..++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...++++|.
T Consensus 260 ~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 677788889999999999999999999999999998888887776665 4666777788899999999999999999988
Q ss_pred cC-------CCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 170 SP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 170 ~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
.+ ++++|.+.++.+....+|..+++.+.+.+.+..|
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 65 4567999999999999999999999888766544
No 166
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.37 E-value=1.1e-11 Score=113.53 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch--hHHHHHHHhHHH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPM 128 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~ 128 (379)
+.++.......+...........+|.+.++.+.+.++. +.+.++..+...++.++.|+++|+.. ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~a--a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDA--AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhh--HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 34555666666666677777778999999999987777 89999999999999999999999988 667777888889
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
+++.+.+.++++++.++..-.+.|++.|.........+.|..+.++-..+.|+.....+++.++||.+.+.+.+..+.|.
T Consensus 376 gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 376 GLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999998888789
Q ss_pred HHHHHHHHHHHHHHHHHhhcC
Q 016986 209 ICFWVSIVPAAILCLAMVFCA 229 (379)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~~~~ 229 (379)
..|+..++..++..+.+++.+
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999998888777776666555
No 167
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.37 E-value=8e-12 Score=114.06 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=100.8
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
...+|.+.++.|.+.+.. +...+.+.++..++.++.|++.||+|||+.+..+.++..+..+.....++.....+.-++
T Consensus 251 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 251 FGLLPTYLAGEGFDTGVV--SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 345676767778765555 788888899999999999999999999999998887776665544433221112222233
Q ss_pred HHh--hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHH
Q 016986 151 VGT--GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (379)
Q Consensus 151 ~G~--~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~ 210 (379)
.|+ +.....+....++.|.+|+++|++++|+......+|..++|.+.+.+.+..+ +...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHHH
Confidence 333 2233345566788999999999999999999999999999999999988777 4443
No 168
>PRK15075 citrate-proton symporter; Provisional
Probab=99.36 E-value=2.4e-11 Score=111.08 Aligned_cols=137 Identities=18% Similarity=0.105 Sum_probs=98.6
Q ss_pred hccccchhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH-H---Hhcccch
Q 016986 67 LGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-I---SATTRNL 141 (379)
Q Consensus 67 ~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~-~---~~~~~~~ 141 (379)
...+....|.+.++ +|.+.++. ++....+.++..++.++.|+++||+|||++++.+.++..+... . ....+++
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADS--LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSF 331 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 33445556766554 78876665 7788888899999999999999999999998876554433221 1 1123444
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHH-HHHHHHHHHHHhhcccccccch
Q 016986 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 142 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
..+.+..++.|++.+...+....++.|.+|+++|+.+.++.. .+..++..++|.+.+.+.+..+
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 445555666677777777777788999999999999999854 4444556778999888888776
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.34 E-value=2.8e-11 Score=109.09 Aligned_cols=148 Identities=15% Similarity=0.015 Sum_probs=111.6
Q ss_pred hhhhhhhhccCCcchhHHHHHHHHHH-HHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc------ccchHHHH
Q 016986 73 PLESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT------TRNLIGML 145 (379)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~ 145 (379)
..+.+.+|.|.+.++. |++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++...+.
T Consensus 230 ~~~~~l~~~G~s~~~i--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWI--GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 4455566789887776 88877765 456677899999999999999998877665333322211 23344445
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhhcCC-CcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 016986 146 LGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 146 ~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
....+.+++.+...+.......+..++ +++++.+++.+...++|..++|.++|.+.+..| |+..|++.++..++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHH
Confidence 556666777777777777887787776 889999999999999999999999999998888 89999887766655443
No 170
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.34 E-value=5.2e-11 Score=97.96 Aligned_cols=176 Identities=15% Similarity=0.115 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
|..+..........+ ....++.+-|++++.+|.+.++. ..+.++-.+|..+ +++.|.+.|++|+|.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 444444444443333 44456788899999999988877 7888888999876 5889999999999999999999999
Q ss_pred HHHHHHhcc-------cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc
Q 016986 130 IGASISATT-------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (379)
Q Consensus 130 ~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (379)
+|..+...+ .++|.+.+..++.|.+.+...+.......+.|| ++||.+.|+.-...+++..+-..+...+.+
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 988775532 467788888888888877777777777888998 579999999999999987666555554444
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 203 IAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 203 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
... -+..+..+..+.++.++..+++++.
T Consensus 157 ~~~-~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 157 DDP-SSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred CCh-HHHHHHHHHHHHHHHHHHhhheecc
Confidence 443 3555555556666665555555444
No 171
>PRK10054 putative transporter; Provisional
Probab=99.33 E-value=1.9e-11 Score=110.20 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-cchHHHHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
+++.+.+.+.....+++.|++.||+++|+.+..++.+..++.+...++ ++.+.+++..++.|+|.+...|....++.+.
T Consensus 247 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~ 326 (395)
T PRK10054 247 AVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHI 326 (395)
T ss_pred HHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 777777777777788899999999999999999988888887777664 5777777888999999988888888999999
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Q 016986 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (379)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 224 (379)
.|++.|+++.+..+ ...+|..+||.+++.+.++.+ ....|++.+....+..+.
T Consensus 327 ~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 327 APPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAWLL 379 (395)
T ss_pred CCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHH
Confidence 99999999988765 455899999999999999888 577777755554444333
No 172
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.32 E-value=5.4e-11 Score=108.66 Aligned_cols=156 Identities=12% Similarity=0.078 Sum_probs=97.9
Q ss_pred cchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH----hcccchHHHH
Q 016986 71 NEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS----ATTRNLIGML 145 (379)
Q Consensus 71 ~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~----~~~~~~~~l~ 145 (379)
...+|.+ .+++|.+.++. ++..++..++..+++++.|+++||+|||+.++.+.++.++..+.. ...++....+
T Consensus 263 ~~~lp~~l~~~~g~s~~~~--~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVA--SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 3455654 45678876555 777888778888999999999999999998877665443333211 1122333222
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHH-HHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Q 016986 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (379)
Q Consensus 146 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 224 (379)
..-.+.+++.+...+....++.|++|++.|+.+.|+.+....+ .....|.+.+.+.. .+.|...+++.++..++..+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHH
Confidence 2222222333444455678899999999999999998765443 33447777775543 343666666666666665555
Q ss_pred HhhcC
Q 016986 225 MVFCA 229 (379)
Q Consensus 225 ~~~~~ 229 (379)
.++++
T Consensus 420 ~~~l~ 424 (432)
T PRK10406 420 SLMLH 424 (432)
T ss_pred HHHhh
Confidence 55443
No 173
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=8.6e-11 Score=102.24 Aligned_cols=160 Identities=20% Similarity=0.176 Sum_probs=131.6
Q ss_pred HhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-cch
Q 016986 63 FGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNL 141 (379)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~ 141 (379)
..-....+.++-|.+++..|++.+.. +++.-+|.++..++..+.|+++|| +.|+.+.....+..+..+...+. ++.
T Consensus 224 ~~g~F~~ftYi~P~L~~v~g~s~~~v--s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~ 300 (394)
T COG2814 224 MTGHFALYTYIRPFLESVAGFSVSAV--SLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASP 300 (394)
T ss_pred HcchhhhHHhHHHHHHHccCCCHhHH--HHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchH
Confidence 33344556677888889999988777 899999999999999999999999 99999998877777777665554 555
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHH
Q 016986 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (379)
Q Consensus 142 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 221 (379)
+..++.-++.|+..+.........+++ ..++.+..+.++....+++|..+|..+||.+.++.| +....+++++..++.
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a 378 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLA 378 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHH
Confidence 566666777888877777777777777 445779999999999999999999999999999988 899999988888877
Q ss_pred HHHHhh
Q 016986 222 CLAMVF 227 (379)
Q Consensus 222 ~~~~~~ 227 (379)
++..+.
T Consensus 379 ~~~~~~ 384 (394)
T COG2814 379 LLLALL 384 (394)
T ss_pred HHHHHH
Confidence 766544
No 174
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.31 E-value=2.2e-11 Score=112.31 Aligned_cols=151 Identities=12% Similarity=0.006 Sum_probs=105.5
Q ss_pred hhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhH-------HHHHHHhHHHHHHHHHHhcccchHHHH
Q 016986 74 LES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR-------RAFQLCALPMIIGASISATTRNLIGML 145 (379)
Q Consensus 74 ~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~l~ 145 (379)
+|. +.+++|.+..+. +.+.+++.++..++.+++|+++||+||| ....+..++.++..++.+..++.+..+
T Consensus 275 ~p~~l~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 352 (476)
T PLN00028 275 IAEYFYDRFGLSLETA--GAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAI 352 (476)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 444 456678876666 8899999999999999999999999875 233334444444445556666666666
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 146 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
+.-++.+++.+...+...+++.+..| ++|+...|+.+.+..+|..+++.+.+ .....+ |+..|++.++..++..++.
T Consensus 353 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~-y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 353 VVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYS-TETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCcc-HhhHHHHHHHHHHHHHHHH
Confidence 66666666665555556666667654 68999999998888888877776643 222334 8999998887777776666
Q ss_pred hhcC
Q 016986 226 VFCA 229 (379)
Q Consensus 226 ~~~~ 229 (379)
++.+
T Consensus 430 ~~~~ 433 (476)
T PLN00028 430 AFIH 433 (476)
T ss_pred Hhee
Confidence 5554
No 175
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=2.8e-11 Score=110.73 Aligned_cols=158 Identities=17% Similarity=0.124 Sum_probs=102.6
Q ss_pred cchhhhhhh-hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH---HHHHHHhc--ccchHHH
Q 016986 71 NEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI---IGASISAT--TRNLIGM 144 (379)
Q Consensus 71 ~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~---~~~~~~~~--~~~~~~l 144 (379)
....|.+.+ ..|.+..+. ++....+.++..++.++.|+++||+|+|+....+..... ++.+.... ..+.+..
T Consensus 271 ~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 271 LDWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHhHHHHHHHccCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 345565554 467776655 788888999999999999999999965432222322211 11121112 2234434
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHH-HHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 016986 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG-LMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 145 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
.+.-++.|++.............|.+|+++|+.+.|+.+....+| .+++|.+.+.+.++.| |...|++.+...++..+
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~ 427 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVI 427 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHH
Confidence 444455555433222222356789999999999999998777766 5789999999999888 89998876655555444
Q ss_pred H-HhhcCCC
Q 016986 224 A-MVFCAES 231 (379)
Q Consensus 224 ~-~~~~~e~ 231 (379)
. .++++|+
T Consensus 428 ~~~~~~~~~ 436 (438)
T TIGR00712 428 LLIVVMIGE 436 (438)
T ss_pred HHHHHHhhc
Confidence 3 4556665
No 176
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.28 E-value=7.8e-11 Score=106.82 Aligned_cols=161 Identities=17% Similarity=0.102 Sum_probs=105.7
Q ss_pred HHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHH-HHHHhHHHHHHHHHH
Q 016986 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA-FQLCALPMIIGASIS 135 (379)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~-l~~~~~~~~~~~~~~ 135 (379)
.+..++.......+...+|.+.++++...+....++..+...++..++.++.|+++||+|||+. .+...++.+++..+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~ 327 (412)
T TIGR02332 248 TLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA 327 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH
Confidence 3333443344444556778887775432223333888999999999999999999999997764 444444444433332
Q ss_pred hcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHH
Q 016986 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (379)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~ 215 (379)
...++....+++-.+.++|.....+.......|.+|+++|+++.|+.+....+|.+++|.+.+.+.+..|+|++.|++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~ 407 (412)
T TIGR02332 328 SATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVA 407 (412)
T ss_pred HhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHH
Confidence 22333222222222333333333344445557788999999999999999999999999999999988765899887765
Q ss_pred HH
Q 016986 216 VP 217 (379)
Q Consensus 216 ~~ 217 (379)
+.
T Consensus 408 ~~ 409 (412)
T TIGR02332 408 AL 409 (412)
T ss_pred HH
Confidence 54
No 177
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.28 E-value=1.3e-11 Score=110.65 Aligned_cols=151 Identities=18% Similarity=0.205 Sum_probs=104.1
Q ss_pred HHHHHHhhhhccccchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch-hHHH-HHHHh-HHHHHHHH
Q 016986 58 LSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRA-FQLCA-LPMIIGAS 133 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G-rr~~-l~~~~-~~~~~~~~ 133 (379)
+..+.............|.+ .+++|.+..+. ++..+.+.++..++.++.|++.||.+ ||+. +.... ....++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKA--SWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 33333333333334445544 45678876666 88899999999999999999999864 3332 22221 22222222
Q ss_pred HHhc--ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHH
Q 016986 134 ISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (379)
Q Consensus 134 ~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f 211 (379)
.... ..+....++..++.|+......+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |++.|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f 379 (379)
T TIGR00881 301 VYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGAF 379 (379)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-ccccC
Confidence 2222 34555566667777776666666667889999999999999999999999999999999999999888 88654
No 178
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.27 E-value=6.4e-11 Score=105.35 Aligned_cols=135 Identities=18% Similarity=0.072 Sum_probs=106.1
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc-hhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 149 (379)
...+|.+.++.|.+..+. +.+.+++.++..+++++.|++.||+ +||+.+..+.++.+++.+...+.++..... .-+
T Consensus 217 ~~~lp~~~~~~g~~~~~~--g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 217 IGWLPAILISHGASAATA--GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 445677777788876665 8999999999999999999999999 567777778888877777666665433322 456
Q ss_pred HHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 150 VVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
+.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.++.+.|.
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 7899999998887777776555 4667888999888888899999999999988776454
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.26 E-value=2.3e-10 Score=102.27 Aligned_cols=173 Identities=19% Similarity=0.239 Sum_probs=130.2
Q ss_pred HHHHHHHHhhhhccccchhhhhhhhcc-CCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 56 ATLSSFLFGYHLGVVNEPLESISLDLG-FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
..+..++.+........+.+...++.| .+.+.. +.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..+
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~--g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTI--GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 334444555555555666677777777 444444 66667777788889999999999999999999999999998888
Q ss_pred Hhcc-cchHHHHHH----HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHH-HHHHHHHHHHhhcccccccchh--
Q 016986 135 SATT-RNLIGMLLG----RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEIAGW-- 206 (379)
Q Consensus 135 ~~~~-~~~~~l~~~----r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~-- 206 (379)
.+.. ++.+...+. ..++|+..+........++.+..|++.|+++.++++. ..++|..+|..++|++.+..+.
T Consensus 290 ~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 290 YAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred HHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 8777 555544333 4569999999999999999999999999999999875 5789999999999999987652
Q ss_pred ---hHHHHHHHHHHHHHHHHHH-hhcCC
Q 016986 207 ---WRICFWVSIVPAAILCLAM-VFCAE 230 (379)
Q Consensus 207 ---wr~~f~~~~~~~~~~~~~~-~~~~e 230 (379)
|...+.+.+...++..+++ ++++|
T Consensus 370 ~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 370 MFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4455556555555554444 33444
No 180
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.26 E-value=2.7e-10 Score=98.77 Aligned_cols=157 Identities=12% Similarity=0.116 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhh---hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISL---DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
...+..++.++........+...+.+.+ .+|++.++. ++..+.+..+..++.+..+++.||+|+|+++.++..+.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a--~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQA--AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 3333444444444333333444454443 357776666 88999999999999999999999999999998888888
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
.++.++....++... ...-++.|++.+..+|...+...+..|++ .+.+.++. ....+|.++.|.+.|.+.+..+ .+
T Consensus 219 ~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~ 294 (310)
T TIGR01272 219 VLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQ 294 (310)
T ss_pred HHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-ch
Confidence 887766666555433 34556889999999999999999988754 45666775 4556888999999999988877 68
Q ss_pred HHHHHH
Q 016986 209 ICFWVS 214 (379)
Q Consensus 209 ~~f~~~ 214 (379)
..|++.
T Consensus 295 ~a~~v~ 300 (310)
T TIGR01272 295 LAFALP 300 (310)
T ss_pred HHHHHH
Confidence 887643
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.25 E-value=3.9e-10 Score=101.60 Aligned_cols=144 Identities=15% Similarity=0.019 Sum_probs=113.6
Q ss_pred hhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHh
Q 016986 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (379)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 153 (379)
.|.+.+++|.+.++. +++.+.+.++..++.++.+++.||.+++.......+......++....++.+.+.+..++.|+
T Consensus 240 ~p~~~~~~g~s~~~~--g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 240 RPVYMNLAGFGVDGL--TLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 466777888887666 888999999999999999999999655444443433344444555566778888888999999
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHH
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 221 (379)
+.+...+...+++.+..| +++++..++......+|..+|+.++|.+.+..| ++..+...+...++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHH
Confidence 999999988889999887 557788888888889999999999999999888 788887766554443
No 182
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=7.1e-11 Score=101.85 Aligned_cols=153 Identities=16% Similarity=0.180 Sum_probs=132.9
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhc
Q 016986 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 156 (379)
-.+++|++..+. .++.-...+..+++++++|+|.||+|.|+++..++++..+.++..-+...-..+.++-.+.|...|
T Consensus 279 g~~~~gls~~~l--ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G 356 (438)
T COG2270 279 GAADLGLSSTEL--LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLG 356 (438)
T ss_pred HHHHcCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcc
Confidence 345899987777 678888888999999999999999999999999999999999888877777777778899999999
Q ss_pred hhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
+.+..+.++.++..|+++-++.+|+++...-.+..+||.+-+.+.+..+.-|..+....++..+.+++.+.+|++
T Consensus 357 ~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 357 GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999999999988877766877777666666666666666654
No 183
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.24 E-value=2.3e-10 Score=102.79 Aligned_cols=148 Identities=12% Similarity=0.063 Sum_probs=106.6
Q ss_pred hhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh-cccchHHHHHHHHHHH
Q 016986 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-TTRNLIGMLLGRFVVG 152 (379)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G 152 (379)
.|.+.+.+|.+.++. ++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+...+..++.+
T Consensus 223 ~~~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 223 KPYMMFISGFSETSM--TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHhcCCCHHHH--HHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 455666678877666 8999999999999999999999999999999988888887776554 3455555666666666
Q ss_pred hhhchhhHHHHH-HHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 153 TGMGLGPTVAAL-YVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 153 ~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
++.....+.... ...+..+++.++.+ ..+....+|..+||.+++.+.+..++|++.+.+.++...+.+...
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 665544444333 33444444445444 346778899999999999998864338999998776665554443
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.23 E-value=5.7e-10 Score=101.18 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=110.0
Q ss_pred hhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-----cchHHHHHH
Q 016986 74 LESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLIGMLLG 147 (379)
Q Consensus 74 ~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~ 147 (379)
.|.+ .+++|.+..+. ++......++..++.++.|+++||+|+|+.+..+.++..++.++.++. ++.+.+++.
T Consensus 238 ~p~~~~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 238 SPVILISGEQLSSYEY--GLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred hHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 3443 56678776555 777777778888999999999999999999999888777776665543 356677788
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHH
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 221 (379)
-++.|++.+...+......... ++++||+..++.+....+|..+|+.+++.+.+..+ |....+..++.+++.
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG-NGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc-hHHHHHHHHHHHHHH
Confidence 8999999888777665555443 45889999999999999999999999999988877 454444444444444
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.23 E-value=2.4e-10 Score=103.26 Aligned_cols=151 Identities=11% Similarity=-0.001 Sum_probs=114.6
Q ss_pred chhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc-cchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
..+|.+.++.+.+..+. +++.++..++...+..+.+++.| |++.|+.+..+.++.+++.++.+++++++.+.+..++
T Consensus 229 ~~~p~~~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAV--KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 35666666654444444 78877777766666666676665 5676777788888888888888888888888888888
Q ss_pred HHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch---hhHHHHHHHHHHHHHHHHH
Q 016986 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---WWRICFWVSIVPAAILCLA 224 (379)
Q Consensus 151 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---~wr~~f~~~~~~~~~~~~~ 224 (379)
.|++.+...|...+++.|..|+++||+++++.+....+|..+||.+++.+.++.+ .-...++..++..++..+.
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9998888888889999999999999999999999999999999999999987642 1244555544554444443
No 186
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.21 E-value=1.7e-10 Score=101.53 Aligned_cols=141 Identities=15% Similarity=0.086 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
.|.+.++.-+.-++...+..++.+|+|.|+.++++.+++++=-++++++++.+.+.+.+.+.|+-.+........|+++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcchhHHHH-HHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH-HhhcCCC
Q 016986 170 SPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-MVFCAES 231 (379)
Q Consensus 170 ~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~ 231 (379)
+|+|..++...+ .+.+..+|..+.+.++|.+.++.| .+..|++.+.+.++..++ .+.++++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999887777777 468889999999999999999998 788888866666555444 4445544
No 187
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.21 E-value=2.2e-10 Score=105.73 Aligned_cols=174 Identities=13% Similarity=0.064 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHH--------HH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA--------FQ 122 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~--------l~ 122 (379)
.+....+..+............+|.+ .+++|.+..+. +++.++..++..++.++.|+++||+++|+. +.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKEN--GLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 34444454455544444445566665 45578876666 899999999999999999999999875521 11
Q ss_pred HHhHH--HHHHHHHHhc-ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccc
Q 016986 123 LCALP--MIIGASISAT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (379)
Q Consensus 123 ~~~~~--~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (379)
.+... ..+..+.... ..+....+++-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~ 418 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGN 418 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 11111 1111212222 33444444444555555555555555555677764 79999999999999999999999998
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 200 VKEIA--GWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 200 l~~~~--~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
+.+.. +.|+..|.+.++..++..+...++
T Consensus 419 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 419 ILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred eeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 87653 348899988877777766555443
No 188
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.1e-09 Score=89.15 Aligned_cols=159 Identities=17% Similarity=0.096 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~ 129 (379)
...+.+++..+....+....+++. ..++.+|+|.... +.+.+....-.++.+++.|.++|++|++...+.+..+..
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~--fF~~rfGlS~~~a--~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPM--FFQKRFGLSAVSA--GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHH--HHHHhhCCChhhc--cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 344445555555544444333333 3678999987776 677777777788999999999999999988887655544
Q ss_pred HH-HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh--
Q 016986 130 IG-ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-- 206 (379)
Q Consensus 130 ~~-~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-- 206 (379)
+. -.+..+ +++.-.++-.+.|+..+.........++...|+++.|++.+..+...++|..+.|++.+.+.+..|+
T Consensus 342 l~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 342 LLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred HHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 43 222222 2333345567788877777777788899999999999999999999999999999999999988764
Q ss_pred hHHHHHHH
Q 016986 207 WRICFWVS 214 (379)
Q Consensus 207 wr~~f~~~ 214 (379)
|--.|.+.
T Consensus 420 ~le~ffl~ 427 (459)
T KOG4686|consen 420 NLEAFFLI 427 (459)
T ss_pred hHHHHHHH
Confidence 44444443
No 189
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.2e-10 Score=98.75 Aligned_cols=172 Identities=19% Similarity=0.177 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHhhhhccccchhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc--hhHHHH-HHHhH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GRRRAF-QLCAL 126 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~--Grr~~l-~~~~~ 126 (379)
+.+..+++++++.+..+..+.--.|.+ .|.-|.+..+. ++..+.|-++...+.+++|+++||+ |||... ++.++
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a--~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKA--NWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHH--HHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 456677788888877777666666644 55667776666 7999999999999999999999985 676544 44455
Q ss_pred HHHHHHHHHhccc--chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHH-HHHHHHhhccccccc
Q 016986 127 PMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKEI 203 (379)
Q Consensus 127 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~ 203 (379)
...++.+..-.++ |+....++-+..|+..-+-.-+.-....|..|++--|.+.|+.+.+..+ |...+....+.+.+.
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 5555555555554 4577778888999887666667777888999999999999999998888 899999999999888
Q ss_pred chhhHHHHHHHHHHHHHHHHHH
Q 016986 204 AGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
.| |...|.+..+.+++..++.
T Consensus 410 ~g-W~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 410 WG-WDGGFIVLSIAALLAILLL 430 (448)
T ss_pred CC-CcchHHHHHHHHHHHHHHH
Confidence 88 9999988666655554443
No 190
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.18 E-value=7.7e-10 Score=100.15 Aligned_cols=146 Identities=16% Similarity=0.116 Sum_probs=101.9
Q ss_pred hhhhhhccCCcchhHHHHHHHHHH-HHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH---hcc-cchHHHHHHHH
Q 016986 75 ESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---ATT-RNLIGMLLGRF 149 (379)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~ 149 (379)
+.+.+++|.+.++. +++.+... .+..++.++.|++.||+|||+.+..+.++..+..+.. ++. ++.+.+++.-+
T Consensus 234 ~~l~~~~G~~~~~~--g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 234 TFLIRGAGFSAGEV--GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 45667788876666 77776554 4678999999999999999998887777666554332 344 45565555543
Q ss_pred ----HHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 150 ----VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 150 ----l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
+.|++.+...+....++.+.+|.++ .++.+...++|..+++.++|.+.+..| |+..|.+.++.+++.+++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH
Confidence 4455555566666666666666544 455555667777766778999999998 9999999887777765555
Q ss_pred hh
Q 016986 226 VF 227 (379)
Q Consensus 226 ~~ 227 (379)
..
T Consensus 387 ~~ 388 (402)
T PRK11902 387 WL 388 (402)
T ss_pred HH
Confidence 43
No 191
>PRK09848 glucuronide transporter; Provisional
Probab=99.18 E-value=5.8e-10 Score=102.47 Aligned_cols=122 Identities=17% Similarity=0.074 Sum_probs=95.3
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc--chHHHHHHHHHHHhhhc
Q 016986 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~ 156 (379)
+.+|.+.... ++......++..++.++++++.||+|+|+++.++.++..++.++..+.+ +++.+++..++.|+|.+
T Consensus 257 ~~~g~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~ 334 (448)
T PRK09848 257 YVLNDTGLFT--VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG 334 (448)
T ss_pred eecCChHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 3455433222 3434444567788999999999999999999999998888877766643 56777777889999999
Q ss_pred hhhHHHHHHHHhhcCCC-------cchhHHHHHHHHHHHHHHHHHhhcccccc
Q 016986 157 LGPTVAALYVTEVSPPF-------VRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (379)
Q Consensus 157 ~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (379)
...+...++.+|..+.+ ++|...++.+....+|..+++.+.+.+.+
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988754 35899999999999999999888776643
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.18 E-value=5.5e-10 Score=114.70 Aligned_cols=142 Identities=17% Similarity=0.110 Sum_probs=118.0
Q ss_pred hhhhhhccCCcc-hhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHh
Q 016986 75 ESISLDLGFNGN-TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (379)
Q Consensus 75 ~~i~~~~~~~~~-~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 153 (379)
+.+.+++|.+.. .. +++.+...++..+++++.|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~s~~~~~--g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGLDNTFQV--QYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCCCcHHHH--HHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 344566888766 55 899999999999999999999999999999999988888888888888898888899999999
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHH
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 218 (379)
+.+...+...+++.+..|+++||+++++.+....+|.++++.+++.+......+...|++.+...
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 399 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVT 399 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 99999888999999999999999999999999999998888887766542111555565544433
No 193
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.18 E-value=1.4e-09 Score=98.65 Aligned_cols=156 Identities=19% Similarity=0.180 Sum_probs=117.0
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----hhHHHHHHHhHHHHHHHHHHhcc----cch
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRAFQLCALPMIIGASISATT----RNL 141 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~ 141 (379)
.+..|.+++++|++..+. ....+...+.. ..-+++|.++|.+ .||+-++++.++..++.+..+.. .+.
T Consensus 10 ~~~~~~l~~~l~ls~~~~--~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQL--QRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 345678899999988777 45566655554 4567889999976 36666677777776655555443 356
Q ss_pred HHHHHHHHHHHhhhchhhHHHHHHHHhhcC--CCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSP--PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 142 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
....+.-++..+|......++-++..|... ++.||...+.......+|.+++..++|.+.+..+ +++.|.+.+....
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHH
Confidence 666677788889999999999999999883 3447788888888999999999999999998888 7999988776666
Q ss_pred HHHHHHhhcCC
Q 016986 220 ILCLAMVFCAE 230 (379)
Q Consensus 220 ~~~~~~~~~~e 230 (379)
+..+..+++.|
T Consensus 166 l~~~~~~~~~~ 176 (433)
T PF03092_consen 166 LMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHhhh
Confidence 65555444444
No 194
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.17 E-value=1.4e-13 Score=126.50 Aligned_cols=160 Identities=17% Similarity=0.126 Sum_probs=104.3
Q ss_pred ccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh--c--cc----
Q 016986 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA--T--TR---- 139 (379)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~--~--~~---- 139 (379)
.....+.+.+.++.+.+.. . +......+...++.++...+.||+|||++++.+.++.+++.+..+ . .+
T Consensus 270 ~~~~~~~~~i~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS-F---LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred ccccccccccccccccccc-c---cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445566777788877665 2 122233344456677777999999999999999998888877664 1 11
Q ss_pred --chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHH
Q 016986 140 --NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (379)
Q Consensus 140 --~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 217 (379)
+...+............+..+....+.+|.+|.+.|+++.++......++.++++.+...+.+..+.+...+...++.
T Consensus 346 ~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~ 425 (451)
T PF00083_consen 346 WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVC 425 (451)
T ss_pred ccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHH
Confidence 122222222221111223345666888999999999999999999888998888888887776664223333334444
Q ss_pred HHHHHHHHhhcCCC
Q 016986 218 AAILCLAMVFCAES 231 (379)
Q Consensus 218 ~~~~~~~~~~~~e~ 231 (379)
.+..++.++++||+
T Consensus 426 ~i~~i~~~~~lpET 439 (451)
T PF00083_consen 426 LIAIIFVYFFLPET 439 (451)
T ss_pred HHHHhheeEEEeeC
Confidence 44444556779998
No 195
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.16 E-value=1.2e-09 Score=98.25 Aligned_cols=132 Identities=18% Similarity=0.285 Sum_probs=98.9
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-----cchHHHHHHHHHH
Q 016986 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLIGMLLGRFVV 151 (379)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~ 151 (379)
+.+++|.+..+. +++.+...++..++.++.|++.||+|||+.+..+..+..++.++.... ++...+++..++.
T Consensus 233 ~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (385)
T TIGR00710 233 YIDIMGVSPSVF--GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFV 310 (385)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 345788876666 888999999999999999999999999999988888777776665543 2344555567888
Q ss_pred HhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHH-HHHHHHHhhcccccccchhhHHHHHH
Q 016986 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC-LGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 152 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
|++.+...+.......|..| ++|+++.++.+.... .|.+.++.++ .+.+..+ |...+..
T Consensus 311 g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~-~~~~~~~ 370 (385)
T TIGR00710 311 GIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTA-WPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccCh-HHHHHHH
Confidence 99999888888888899886 679999999876654 4666667665 4444333 4444443
No 196
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.15 E-value=7.3e-10 Score=98.62 Aligned_cols=116 Identities=19% Similarity=0.226 Sum_probs=93.5
Q ss_pred ccchhhhhhhhccCCcchhHHHHHHHHHH-HHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc----------
Q 016986 70 VNEPLESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---------- 138 (379)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---------- 138 (379)
.....|.+.+++|.+.++. +.+.++.. ++..++.+++|++.||+|||+.+..+.++.++...+..+.
T Consensus 228 ~~~~~~~~l~~~g~~~~~~--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 228 ATVLTTLFLLDMGFSKEEI--ALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHHHcCCCHHHH--HHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 3445666666688876665 77776655 5678999999999999999999998888877776655442
Q ss_pred -cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHH
Q 016986 139 -RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC 187 (379)
Q Consensus 139 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 187 (379)
++.+.+..+.++.+++.+...+...+++.|.+|+|+||+.+++.+...+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4556777788999999999999999999999999999999999877654
No 197
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.14 E-value=5.9e-10 Score=103.62 Aligned_cols=131 Identities=16% Similarity=0.141 Sum_probs=109.2
Q ss_pred chhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc----ccchHHHHH
Q 016986 72 EPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT----TRNLIGMLL 146 (379)
Q Consensus 72 ~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~l~~ 146 (379)
..+|.+. +.+|.+..+. ++......++..++.++.|++.||+|||+++..+..+.+++.++..+ ..+++.+..
T Consensus 276 ~~~p~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (485)
T TIGR00711 276 YLLPLYLQQVLGYTALQA--GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIAL 353 (485)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 4556554 4478776666 88899999999999999999999999999999999888888877662 235666777
Q ss_pred HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc
Q 016986 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (379)
Q Consensus 147 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (379)
..++.|++.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++.
T Consensus 354 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 354 PQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999888777778888899999999999999999999999999888776543
No 198
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.14 E-value=8.1e-11 Score=99.23 Aligned_cols=131 Identities=20% Similarity=0.151 Sum_probs=97.0
Q ss_pred HHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchh
Q 016986 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT 177 (379)
Q Consensus 98 ~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 177 (379)
.+.-..|.++.+.+.||+|||+.+..++++++++.++.-.+.+...+.+.-+..-++.++.+.+.+.|..|.+|.+.|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34556888999999999999999999999999999988777654444433333334444555667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 178 YGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
+.|.......+|.++.|+++ ...... -..+..+.+...++..+...++|-+
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheeeeec
Confidence 99999999999999999998 222222 1334445555555666666777744
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.13 E-value=4.5e-10 Score=99.69 Aligned_cols=123 Identities=27% Similarity=0.342 Sum_probs=104.1
Q ss_pred ccchhhhh-hhhccCC-cchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc---chHHH
Q 016986 70 VNEPLESI-SLDLGFN-GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR---NLIGM 144 (379)
Q Consensus 70 ~~~~~~~i-~~~~~~~-~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l 144 (379)
.....|.+ .+++|.+ ..+. +++.++..++..++.++.|+++||+|+|+..........+..+...+.. +....
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQA--GLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWL 302 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHH
T ss_pred hhcccchhhhhccCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 45666765 8888887 3444 8889999999999999999999999998888887777777776665543 45777
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 016986 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (379)
Q Consensus 145 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 194 (379)
++.-++.|++.+...+....++.|..|+++|+++.++.+...++|..++|
T Consensus 303 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 303 IIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77888999999999999999999999999999999999999999999887
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.12 E-value=9.3e-10 Score=112.73 Aligned_cols=143 Identities=16% Similarity=0.053 Sum_probs=113.5
Q ss_pred hhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-------------
Q 016986 73 PLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------------- 138 (379)
Q Consensus 73 ~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~------------- 138 (379)
.+|.+. +.+|.+.... |++.+++.++..+++++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 247 ~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 247 QLPLLAKETLGGDENVA--TLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HhHHHHHHHcCCchHHH--HHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 455554 4578776655 899999999999999999999998887777666666666655544443
Q ss_pred -------cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHH
Q 016986 139 -------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (379)
Q Consensus 139 -------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f 211 (379)
++.+.+++..++.|++.+...+...+++.+..|+++||+++|+.+....+|..+++++.+.+.....++...+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~ 404 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWII 404 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 6777888889999999999999999999999999999999999999999999999999888864332256666
Q ss_pred HHHHHH
Q 016986 212 WVSIVP 217 (379)
Q Consensus 212 ~~~~~~ 217 (379)
++.+..
T Consensus 405 ~~~~~~ 410 (1140)
T PRK06814 405 LFIALA 410 (1140)
T ss_pred HHHHHH
Confidence 554443
No 201
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.12 E-value=3.1e-08 Score=93.55 Aligned_cols=151 Identities=15% Similarity=0.176 Sum_probs=117.3
Q ss_pred hhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhHHHHHHHHHHhcccc--------hHH
Q 016986 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRN--------LIG 143 (379)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~ 143 (379)
+...+.+.+|.+.+.. ..+...+....-+.+.+.|.++|+ +||++.++++.++..++.++.+++.. ...
T Consensus 10 LvlYl~~~lg~~~~~A--~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 10 LVLYFLNFLGFSESTS--TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 3445556678776655 567777777777889999999995 79999999999999999888776421 223
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHHhhcCCC---cchhHHHHHHHHHHHHHHHHHhhccccccc-------chhhHHHHHH
Q 016986 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPF---VRGTYGAFIQIATCLGLMGSLLIGIPVKEI-------AGWWRICFWV 213 (379)
Q Consensus 144 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------~~~wr~~f~~ 213 (379)
.+++-.+..+|.|+.-+...+...|.++++ +|-....++..+.++|+++++.+.+++.+. .+ |...|.+
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~-~~~aF~i 166 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC-YPLAFGV 166 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHHH
Confidence 556778888899999999999999999754 366788888899999999998888877633 24 8999988
Q ss_pred HHHHHHHHHHHHh
Q 016986 214 SIVPAAILCLAMV 226 (379)
Q Consensus 214 ~~~~~~~~~~~~~ 226 (379)
.++..++.++.+.
T Consensus 167 ~~i~m~ia~lvf~ 179 (654)
T TIGR00926 167 PAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 8777776665554
No 202
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=3.8e-09 Score=93.97 Aligned_cols=165 Identities=14% Similarity=0.023 Sum_probs=106.8
Q ss_pred HHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchh---HHHHHH-HhHHHHHHHH
Q 016986 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR---RRAFQL-CALPMIIGAS 133 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr---r~~l~~-~~~~~~~~~~ 133 (379)
+..++.......+...+|.+.++.|.+.+ . +...++..+...++ .++++||.+| |+.... ..++.++...
T Consensus 199 ~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~--~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~ 272 (368)
T TIGR00903 199 AILGFGVALFDNLAIWLEAALRPAGLEDI-A--GDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL 272 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCChH-H--HHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 33333333333444567777777776643 2 55555555554554 4667776654 444333 4444455554
Q ss_pred HHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 016986 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (379)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~ 213 (379)
..+++.+....++.-.+.|++.....+...++.+|.+|++.|+++.|+.+....+|..++|.+.+.+.. + -+..|.+
T Consensus 273 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~ 349 (368)
T TIGR00903 273 ALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTF 349 (368)
T ss_pred HHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHH
Confidence 555555555555556667777777778888999999999999999999999999999888888776663 3 4666766
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 016986 214 SIVPAAILCLAMVFCAES 231 (379)
Q Consensus 214 ~~~~~~~~~~~~~~~~e~ 231 (379)
.++..++..+...+.+++
T Consensus 350 ~~~~~~i~~~~~~~~~~~ 367 (368)
T TIGR00903 350 LAILITIAFAIALLLPND 367 (368)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 666666655544444543
No 203
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.11 E-value=2.2e-09 Score=99.24 Aligned_cols=113 Identities=9% Similarity=0.035 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc-----ccchHHHHHHHHHHHhhhchhhHHHHHH
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALY 165 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 165 (379)
+++.++..++..++.+++++++||+|+|+.+..+.++..++.+...+ .++.+.+++.-++.|++.+...+...++
T Consensus 269 ~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am 348 (473)
T PRK10429 269 PYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIM 348 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777888999999999999999999999888776665554332 3456677777888999999999999999
Q ss_pred HHhhcC-------CCcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 166 VTEVSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 166 i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
++|..+ +++.|...+......-+|..+++.+.+.+.+.
T Consensus 349 ~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 349 VADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999965 33345688888888888988888887776543
No 204
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.10 E-value=4e-09 Score=91.66 Aligned_cols=157 Identities=28% Similarity=0.406 Sum_probs=124.4
Q ss_pred HHHhhhhccccchhhhhhhhccCCcc--hhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc
Q 016986 61 FLFGYHLGVVNEPLESISLDLGFNGN--TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (379)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 138 (379)
+....+........+.+..+++.+.. .. ++..+.+.++..++.++.|.++||+|||+.++.+.....++.+..++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLY--GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA 89 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHH--HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 33335555566677777777765542 34 799999999999999999999999999988888887766666777777
Q ss_pred cc--hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC-CcchhHHHHHHH-HHHHHHHHHHhhccccccc--chhhHHHHH
Q 016986 139 RN--LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEI--AGWWRICFW 212 (379)
Q Consensus 139 ~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~--~~~wr~~f~ 212 (379)
.+ .+.+++.|+++|++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+ ||+.|.
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 168 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWG-WRAAFL 168 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHH
Confidence 66 89999999999999999999999999999987 678999998888 5788888888777766654 33 899776
Q ss_pred HHHHHHHH
Q 016986 213 VSIVPAAI 220 (379)
Q Consensus 213 ~~~~~~~~ 220 (379)
........
T Consensus 169 ~~~~~~~~ 176 (338)
T COG0477 169 LAALLGLL 176 (338)
T ss_pred HHHHHHHH
Confidence 65555433
No 205
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.07 E-value=3.2e-09 Score=92.42 Aligned_cols=147 Identities=12% Similarity=0.107 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc----chhHHHHHH-HhHH
Q 016986 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQL-CALP 127 (379)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~----~Grr~~l~~-~~~~ 127 (379)
++.+....+-..+....--.+.|++..+.|++..-. +.+--.-.+...+.+|+.|..+|| |||||.++. +.+.
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~--S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWS--SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccc--cccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 333333333344444444456677778888865544 555555566677899999999995 898877766 4556
Q ss_pred HHHHHHHHhcccchHH-----------------HHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchh-HHHHHHHHHHHH
Q 016986 128 MIIGASISATTRNLIG-----------------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT-YGAFIQIATCLG 189 (379)
Q Consensus 128 ~~~~~~~~~~~~~~~~-----------------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g 189 (379)
..++.++.+++.++.. ++++-.+.=++.-.....+-++++|...++++.+ +.+.+.....+|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 6677777777765433 2233334444455677788899999998776666 999999999999
Q ss_pred HHHHHhhccccc
Q 016986 190 LMGSLLIGIPVK 201 (379)
Q Consensus 190 ~~~~~~~~~~l~ 201 (379)
..+|..++++..
T Consensus 192 nvLGY~~g~y~~ 203 (498)
T KOG0637|consen 192 NVLGYALGSYLG 203 (498)
T ss_pred ceeeeecccccC
Confidence 999998887543
No 206
>PRK09669 putative symporter YagG; Provisional
Probab=99.07 E-value=4e-09 Score=96.80 Aligned_cols=115 Identities=15% Similarity=0.059 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH-hc-ccchHHHHHHHHHHHhhhchhhHHHHHHHHh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS-AT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~-~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 168 (379)
+.+.....+...++.+++++++||+|+|+.+..+.++..+..+.. .. .++.+.+++..++.|++.+...+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666677778899999999999999999998887666543322 22 3567777888899999999999999999999
Q ss_pred hcCC-------CcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 169 VSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 169 ~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
..+. ++.|...+..+....+|..+|+.+++.+.+..|
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8852 334567788888888999999888877665443
No 207
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.07 E-value=1.5e-09 Score=100.84 Aligned_cols=129 Identities=12% Similarity=0.011 Sum_probs=107.9
Q ss_pred chhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc---ccchHHHHHH
Q 016986 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---TRNLIGMLLG 147 (379)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~ 147 (379)
...|. +++.+|.+..+. |+....+.++..++.++.|++.||+|+|+++..+.++.+++.++... .++.+...+.
T Consensus 280 ~~~~~~lq~v~g~s~~~a--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 357 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEA--GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGL 357 (495)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 34444 455578876666 89999999999999999999999999999999898888777665543 2456666778
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (379)
.++.|+|.|...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 358 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 358 MALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998888899999999999999999999999999999998887754
No 208
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.07 E-value=2e-09 Score=98.30 Aligned_cols=146 Identities=16% Similarity=0.130 Sum_probs=116.0
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
......++........+...+.+.++ +|.+ +.. +.+..+..++..++.+++++++||+|+|+++..+..+.+++.+
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~--~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 305 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLI--SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFL 305 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhh--HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHH
Confidence 34444444455555555555555554 3433 333 7888889999999999999999999999999999999999999
Q ss_pred HHhccc--chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC-------CcchhHHHHHHHHHHHHHHHHHhhccccccc
Q 016986 134 ISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 134 ~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (379)
+..+.+ |.+.+++.-++.|++.+...+...++++|..+. ++.|...+..+...-+|..+++.+.+.+.+.
T Consensus 306 ~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 306 LLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 888886 999999999999999999999999999998863 3458888999998899988888877766543
No 209
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.05 E-value=2.8e-09 Score=96.20 Aligned_cols=132 Identities=11% Similarity=0.114 Sum_probs=86.7
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhc
Q 016986 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 156 (379)
+.+++|.+..+. +.+.+...++..++.++.+++.||+|||+++..+.++..++.++..+.++....+..-.+.+.|.+
T Consensus 230 ~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEY--AIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446778876655 888888999999999999999999999999999999888888877777665544444445444444
Q ss_pred hhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHH
Q 016986 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (379)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~ 216 (379)
...+. ....+..|.++|+ +.......++..+++.+++++....+ +.....+.+.
T Consensus 308 ~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~ 361 (392)
T PRK10473 308 VGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGI 361 (392)
T ss_pred HHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHH
Confidence 44333 2334555654443 33334445555566666666665555 4443344333
No 210
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.04 E-value=9e-09 Score=92.77 Aligned_cols=139 Identities=12% Similarity=-0.013 Sum_probs=106.4
Q ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhh
Q 016986 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGM 155 (379)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 155 (379)
.+++.+|.+..+. |++.+.+.++..+++++.+++.||.++|+++..+.. .++..++.++.++++..++..++.|++.
T Consensus 231 ~~~~~lg~s~~~~--G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQP--AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 3456678876665 999999999999999999999999999988887753 4455555566777777777888999998
Q ss_pred chhhHHHHHHHHhhcCCCc-chhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHH
Q 016986 156 GLGPTVAALYVTEVSPPFV-RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (379)
Q Consensus 156 ~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~ 217 (379)
+...+...+.+.|..|++. +|++.++.+....+|..++..+.+.+....-.++..|...+.+
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8888888888888766654 7999999999999999999988886643321134444333333
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.04 E-value=1.1e-08 Score=91.92 Aligned_cols=121 Identities=12% Similarity=0.117 Sum_probs=86.0
Q ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH---Hhc-ccchHHHHHHHHHH
Q 016986 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SAT-TRNLIGMLLGRFVV 151 (379)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~---~~~-~~~~~~l~~~r~l~ 151 (379)
.+.+++|.+..+. ++..+...++..++.++.|++.||+|||+.+..+..+..+..+. ... ..+++...++-.+.
T Consensus 220 ~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T PRK11102 220 VYIELNGVSPQNF--GYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAF 297 (377)
T ss_pred HHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3456678876666 89999999999999999999999999999998887764443322 222 23455555555555
Q ss_pred HhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHH-HHHHHHHHHhhccc
Q 016986 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIA-TCLGLMGSLLIGIP 199 (379)
Q Consensus 152 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~ 199 (379)
+.+.+...+....++.|..| ++|+++.++.+.. ..+|..+++++++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 298 VGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55555556666677788776 7899999987654 56777888877654
No 212
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.03 E-value=1.5e-08 Score=94.56 Aligned_cols=173 Identities=17% Similarity=0.079 Sum_probs=112.0
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 134 (379)
.+.+..+...........+.+.+.+..|.+.+.. +...+..+...++..+...+.||+|||+.++.+...+.++.++
T Consensus 299 ~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~---~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~ 375 (513)
T KOG0254|consen 299 GLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTF---LASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVI 375 (513)
T ss_pred HHHHHHHHHHhCCceEEeehHHHHHhcCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHH
Confidence 3444444444455666778888888888875532 4455556666777788899999999999999999999999888
Q ss_pred Hhcccc-------------hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 135 SATTRN-------------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 135 ~~~~~~-------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
.+.... ...+...-+.......+..++...+.+|.+|.+.|+++.++......+...+-......+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 376 LAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 775421 1122222333333344455666688999999999999999988777776555444433343
Q ss_pred ccchhhHHHHHH-HHHHHHHHH-HHHhhcCCC
Q 016986 202 EIAGWWRICFWV-SIVPAAILC-LAMVFCAES 231 (379)
Q Consensus 202 ~~~~~wr~~f~~-~~~~~~~~~-~~~~~~~e~ 231 (379)
+..+ +...|.. .++..+... ..++++||+
T Consensus 456 ~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 456 EALG-IGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred Hhcc-ccchHHHHHHHHHHHHHHHheEEcccC
Confidence 3332 2334444 333333333 355678998
No 213
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.02 E-value=4.5e-07 Score=82.02 Aligned_cols=287 Identities=8% Similarity=-0.008 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcc---hhHHHHHHHHHHHHHHHH-HHhHHhhhccchhHHHHHHHh
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGN---TLAEGLVVSMCLGGAFIG-STLSGWIADGVGRRRAFQLCA 125 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~s~~~~~~~i~-~~~~g~l~d~~Grr~~l~~~~ 125 (379)
++.++...+..|+..++.+ ++-++++.+.++.. .....++-+...+..++. .++.+++++|++|++++-...
T Consensus 6 ~~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 3444455555555555543 45556666666321 122377777776666555 889999999999999998877
Q ss_pred HHHHHHHHHHhcc----c---------------------------chHHHHHHHHHHHhhhchhhH-HHHHHHHhhcCCC
Q 016986 126 LPMIIGASISATT----R---------------------------NLIGMLLGRFVVGTGMGLGPT-VAALYVTEVSPPF 173 (379)
Q Consensus 126 ~~~~~~~~~~~~~----~---------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~ 173 (379)
..+....+++++. + +.|...+..+...+-...... ....+..|.++.+
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~ 161 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID 161 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 7777766665544 1 123333444555555555565 7789999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcccccc-------cchhhH----HHHHHHHHHHHHHHHHHhhcCCChhHHHHcCChH
Q 016986 174 VRGTYGAFIQIATCLGLMGSLLIGIPVKE-------IAGWWR----ICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTA 242 (379)
Q Consensus 174 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~wr----~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 242 (379)
|-.|..++.+.+.++|.++++.+..++.+ ..+.|. ..+.+.++...+...+..++.+.. ..+++..
T Consensus 162 qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~---~~~~~~~ 238 (472)
T TIGR00769 162 EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV---LTDPRSY 238 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCcccc
Confidence 99999999999999999999988877762 222252 222333333333333333332110 0000000
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCC
Q 016986 243 EAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS 322 (379)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (379)
+.+ +..+.++.+.....+.+.++++|......+...++.......... +-.......+..
T Consensus 239 ~~~-----------------~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~---~k~~v~~~~p~~ 298 (472)
T TIGR00769 239 NPA-----------------LKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVT---WKSKLKAQYPSP 298 (472)
T ss_pred chh-----------------hccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCH
Confidence 000 000111122233456777888887776655554444332222211 112222222221
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 016986 323 ------SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVI 363 (379)
Q Consensus 323 ------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i 363 (379)
.|......++..++..++.+++.+|+|=+....+.-+.+.+
T Consensus 299 ~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 299 NEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 22445555666666677779999999877655544444433
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=99.01 E-value=1e-08 Score=93.68 Aligned_cols=136 Identities=13% Similarity=0.009 Sum_probs=105.4
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhch
Q 016986 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (379)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 157 (379)
++.+|.+..+. ++....+.++..++.++.|++.||+|||+++..+.++..++.++..+.++.. .+..-.+.|++.+.
T Consensus 287 ~~~~g~s~~~a--g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFA--ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHH
Confidence 45678877766 8999999999999999999999999999999998888777776666666542 34566789999999
Q ss_pred hhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHH
Q 016986 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (379)
Q Consensus 158 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 218 (379)
.+|...+...|..++ +.+.+.++..+. .+|..++|.+.+.+.+..|.-|..|++..+..
T Consensus 364 i~P~~~s~a~~~~~~-~~~~as~l~~~~-~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 364 QYPTIFSLGIKNLGQ-DTKYGSSFIVMT-IIGGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred HHHHHHHHHHcccch-hhccchhHHhHH-hccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 999999999998875 467777777654 46777787888888776642366776544433
No 215
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.99 E-value=3e-09 Score=91.91 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=116.2
Q ss_pred cchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc-------chH
Q 016986 71 NEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-------NLI 142 (379)
Q Consensus 71 ~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~ 142 (379)
+..+|. +.++|+.+..+. |.....+.+...+.-+..|+++||+|.+|++......++++..+.+... +..
T Consensus 238 s~~l~~~~~~~fg~~~~~A--g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~ 315 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTA--GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFV 315 (417)
T ss_pred HHHHHHHHHHhcCCChhhH--HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchH
Confidence 344443 567899987777 8999999999999999999999999999999999999888888877663 333
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHH
Q 016986 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (379)
Q Consensus 143 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~ 222 (379)
..++.-+..++..|........++...+|+ +-|.+.|+.+...++|...-|..-+...+..|.+...|++.....+++.
T Consensus 316 ~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~ 394 (417)
T COG2223 316 VFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVAL 394 (417)
T ss_pred HHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 333333333333333334455777777764 6899999999999999888888888777777768999998777777766
Q ss_pred HHHhh
Q 016986 223 LAMVF 227 (379)
Q Consensus 223 ~~~~~ 227 (379)
+..+.
T Consensus 395 v~~~~ 399 (417)
T COG2223 395 VLTWA 399 (417)
T ss_pred HHHHH
Confidence 65443
No 216
>PRK11043 putative transporter; Provisional
Probab=98.99 E-value=3.3e-08 Score=89.58 Aligned_cols=130 Identities=11% Similarity=0.014 Sum_probs=97.8
Q ss_pred hhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHH---hc--ccchHHHHHH
Q 016986 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---AT--TRNLIGMLLG 147 (379)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~--~~~~~~l~~~ 147 (379)
..|.+.+++|.+..+. ++......++..++.++.+++.||+|+|+.+..+.+..+++.+.. .. .++...+++.
T Consensus 225 ~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 225 GSPFILEQMGYSPADI--GLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 4566777788876665 777777788888999999999999999987766555544443322 22 3456656666
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
..+.|++.+...+.......|..| ++|+++.++++.....+...++.+.+.+.+...
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 359 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPL 359 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCCh
Confidence 778888888888888888888776 579999999998878787888888777766543
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.98 E-value=3e-08 Score=91.51 Aligned_cols=134 Identities=13% Similarity=-0.017 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHhHH----hhhcc-chhHHHH--HHHhHHHHHHHHHHhc---------ccchHHHHHHHHHHHhh
Q 016986 91 GLVVSMCLGGAFIGSTLSG----WIADG-VGRRRAF--QLCALPMIIGASISAT---------TRNLIGMLLGRFVVGTG 154 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g----~l~d~-~Grr~~l--~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~ 154 (379)
+++.+...+...+.+++.. ++.|| .+++... .+|+++.+++.+..++ ..|+++++...++.|+|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 6888888888888887755 44444 3333433 7788888888777664 46899999999999999
Q ss_pred hchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 155 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
+....|...+++++..|++.||+++|++..+..+|..+++.+........+ |...|...++..++..++.
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988887766656 7777776555555444433
No 218
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=8.5e-09 Score=92.99 Aligned_cols=134 Identities=15% Similarity=-0.015 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh-cc-----cchHHHHHHHHHHHhhhchhhHHHHHHHH
Q 016986 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-TT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 167 (379)
..+..+...+..+++|+++||+|+|+++.++.+...++..... .. .+++.+.+..+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 3344577788999999999999999999998887777654321 11 34565555555555555556666667788
Q ss_pred hhcCC---------------------CcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHh
Q 016986 168 EVSPP---------------------FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (379)
Q Consensus 168 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 226 (379)
+.+|+ ++-|.+.|+.+....+|..+.|.+-+...+..|.+...|+...+..++++++-+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 88874 155678888888888888888877666666666588888887777666666544
Q ss_pred h
Q 016986 227 F 227 (379)
Q Consensus 227 ~ 227 (379)
+
T Consensus 452 ~ 452 (462)
T PRK15034 452 L 452 (462)
T ss_pred H
Confidence 3
No 219
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.96 E-value=8.7e-08 Score=81.36 Aligned_cols=154 Identities=16% Similarity=0.124 Sum_probs=123.5
Q ss_pred ccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhHHHHHHHHHHhcccchHHHHHHH
Q 016986 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (379)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 148 (379)
.-.-+|.+..|-|+|..+. |++.+...+.....++....+.+| -.+|+..+....++.++.+.+.+.+.-..+.- -
T Consensus 227 ~~~WLP~ili~~G~sa~~a--G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~ 303 (395)
T COG2807 227 VIGWLPAILIDRGLSAAEA--GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-A 303 (395)
T ss_pred HHHHHHHHHHHcCCCHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-H
Confidence 3456899999999988887 999999999999999999999995 56888888888888888888887765544444 4
Q ss_pred HHHHhhhchhhHHHHHHHHhhcCC-CcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHh
Q 016986 149 FVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (379)
Q Consensus 149 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 226 (379)
++.|+|.|..++.....+.+..++ ++-++-.++.+....+=..+||.+.|.+.|..|+|+..+...+...+...+.-+
T Consensus 304 ~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 304 LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998864 444555566666555667889999999999998899998877666665555443
No 220
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.90 E-value=8.6e-08 Score=89.00 Aligned_cols=131 Identities=9% Similarity=-0.002 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHhH----HhhhccchhHHHHHHHhHHHHHHHHHHhcccc---------hHHHHHHHHHHHhhhch
Q 016986 91 GLVVSMCLGGAFIGSTLS----GWIADGVGRRRAFQLCALPMIIGASISATTRN---------LIGMLLGRFVVGTGMGL 157 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~----g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~l~~~r~l~G~~~~~ 157 (379)
++..++..+...+..++. +++.||++.++.+.+|+++.+++.+..+.+++ .++++..+++.|+|+..
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 566666665555555555 77888888888899999999999888776654 46788899999999999
Q ss_pred hhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc----------ccchhhHHHHHHHHHHHHHHH
Q 016986 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK----------EIAGWWRICFWVSIVPAAILC 222 (379)
Q Consensus 158 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----------~~~~~wr~~f~~~~~~~~~~~ 222 (379)
..|...+++.+..|++.||+++|++..+..+|..++..+..... ...+ ..+.|...++.+++..
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~a 472 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEV-YGRVFLQIGIATAVIA 472 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhh-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888777665553211 0112 4667766555554433
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=3.4e-08 Score=89.64 Aligned_cols=176 Identities=15% Similarity=0.094 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhh-hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchh---------HH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR---------RR 119 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr---------r~ 119 (379)
-..+..++++.+........+...+|.+.+ -+|.+..+. |++.++..+...+..+++|.++||.-+ |.
T Consensus 257 s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~--G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rki 334 (466)
T KOG2532|consen 257 SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRET--GFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKI 334 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHH
Confidence 346667778888888887777778887655 478877777 999999999999999999999998744 44
Q ss_pred HHHHHhHHHHHHHHHHhcccchHH-HHHHHHHHHhh-hchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc
Q 016986 120 AFQLCALPMIIGASISATTRNLIG-MLLGRFVVGTG-MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (379)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (379)
.-.++....+++.+..++.++-.. ..+.-+..+.+ .|...+....-..|.. +++-+..+++.+....+..+++|.+.
T Consensus 335 fn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 335 FNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 444566666666666676653111 11111222222 2222222223333434 46689999999999999999999999
Q ss_pred cccccc--chhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 198 IPVKEI--AGWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 198 ~~l~~~--~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
+.+.+. ...||+.|++.++..++..+.+.++
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 999852 2249999999888877776655444
No 222
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.88 E-value=6e-08 Score=87.79 Aligned_cols=140 Identities=9% Similarity=-0.090 Sum_probs=101.2
Q ss_pred cchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHH
Q 016986 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (379)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (379)
...++.+.++.+...+....+...+.+..+..++.++.+++.||+++|+++.++.++..+..++..+.++... ...-++
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~ 330 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTL 330 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHH
Confidence 3455555555433222222244566666778899999999999999999999999998888888888777544 566778
Q ss_pred HHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc-----hhhHHHHHH
Q 016986 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA-----GWWRICFWV 213 (379)
Q Consensus 151 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~wr~~f~~ 213 (379)
.|++.++.+|...+...+..+++.+....++. ++ .+|..+.|.+.|.+.+.. |+.+..|++
T Consensus 331 ~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~ 396 (410)
T TIGR00885 331 CSAFMSLMFPTIYGIALKGLGQDTKYGAAGLV-MA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFIL 396 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HH-HhccchHHHHHHHHHHHhcccccCccchHHHH
Confidence 88889999999999999999865443333333 33 389999999999999853 225667765
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=7.4e-09 Score=88.60 Aligned_cols=168 Identities=16% Similarity=0.092 Sum_probs=125.8
Q ss_pred HHHHHHHHHhhhhccccchhhh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch--hHHHHHHHhHHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMIIG 131 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~ 131 (379)
++.......+......-|.++. +.+.+..+..+. |+..--..+.+.++..+.|.++||++ |-.....|++..++.
T Consensus 274 ~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~--G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~ 351 (464)
T KOG3764|consen 274 LIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEV--GLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVS 351 (464)
T ss_pred hhhcchhhccchHHHhCcccHHHHHHhccCCCcce--eeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 3333334444555555666665 556666333344 55555667788999999999999999 655556677777777
Q ss_pred HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCC------cchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF------VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
+....+++++.++.+-++..|++.+...........+....+ .-|...++...++++|..+||.+++.+.+..|
T Consensus 352 ~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG 431 (464)
T KOG3764|consen 352 SGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG 431 (464)
T ss_pred hchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh
Confidence 788889999999999999999888887777666666666432 34688999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 016986 206 WWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~ 225 (379)
++|.-.+.++..++...+.
T Consensus 432 -F~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 432 -FEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 7888877777766654443
No 224
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1.1e-07 Score=84.94 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=96.9
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc--chHHHHHHHHHHHhhhch
Q 016986 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGL 157 (379)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 157 (379)
++.++.++....+.......+..++.+++.++++|+|+|+++..+.++..++.++.-+.+ +...+++..++.++|.+.
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhc
Confidence 445666666656777777888888899999999999999999999999999999877765 788888899999999999
Q ss_pred hhHHHHHHHHhhcCC-------CcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 158 GPTVAALYVTEVSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 158 ~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
..+...++++|..+- +.-|...+......=+|..++..+.++..
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887642 23356667777666677777766555444
No 225
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.82 E-value=2.2e-07 Score=83.93 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=93.5
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH-HHHHHHHHHhc--ccchHHHHHHHHHHHh
Q 016986 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMIIGASISAT--TRNLIGMLLGRFVVGT 153 (379)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~-~~~~~~~~~~~--~~~~~~l~~~r~l~G~ 153 (379)
+.+.+|.+..+. +++.....++..++.++.+++.||+|++........ ...+....... ..+.+.+++..++.|+
T Consensus 234 ~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (394)
T PRK11652 234 MGAVLGLSSMTV--SILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFF 311 (394)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 344478776555 888888888889999999999999985443332222 22222222222 3456677778899999
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
+.+...+....+..|.+| ++++.+.++.+....+|..+++.+++.+.....
T Consensus 312 g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 362 (394)
T PRK11652 312 GAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQ 362 (394)
T ss_pred HHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 999999999999999987 578999999999999999999999888766543
No 226
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.82 E-value=1.1e-08 Score=90.76 Aligned_cols=167 Identities=22% Similarity=0.145 Sum_probs=135.9
Q ss_pred HHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh
Q 016986 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (379)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~ 136 (379)
++..++.+...+.+...+-.-.+|.+-... ..|........+-.+.-++.+++.+++|+-+++..++.+..+=.+..+
T Consensus 377 f~~av~mG~g~~lv~tFLfWHled~~~~~~--LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S 454 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLEDLGGIKT--LFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYS 454 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCcce--eeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHH
Confidence 333444444444444444445666664332 237667777778888889999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHH-HHHHHHHHHHHhhcccccccchhhHHHHHHHH
Q 016986 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (379)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~ 215 (379)
+.+|.|+.+-..+++|+..+..+.+..+|+++..||+-|..+.++.+ ...++|--+|.++||.+....+ =|..|.+.+
T Consensus 455 ~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~g 533 (618)
T KOG3762|consen 455 YLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFG 533 (618)
T ss_pred HhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHH
Confidence 99999999999999999999999999999999999999999999975 5668889999999999999988 588888887
Q ss_pred HHHHHHHHHHh
Q 016986 216 VPAAILCLAMV 226 (379)
Q Consensus 216 ~~~~~~~~~~~ 226 (379)
+.+++.++...
T Consensus 534 iAcl~~l~~~~ 544 (618)
T KOG3762|consen 534 IACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHH
Confidence 77776655543
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.79 E-value=8.3e-08 Score=88.32 Aligned_cols=150 Identities=11% Similarity=-0.003 Sum_probs=117.0
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcc----------cchHHHHHHH
Q 016986 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----------RNLIGMLLGR 148 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r 148 (379)
+.+|.+.... |++.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-
T Consensus 281 ~~lG~s~~~~--G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFS--GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCCCcchh--hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 5678877777 899999999999999999999999999999999999998887554311 3334455567
Q ss_pred HHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch-----h-hHHHHH-HHHHHHHHH
Q 016986 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-----W-WRICFW-VSIVPAAIL 221 (379)
Q Consensus 149 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----~-wr~~f~-~~~~~~~~~ 221 (379)
++.+++.+........++.+..|+++++...++.+...++|..+++.+++.+.+..| . .++... +..+..++.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999999988877654 1 222222 233334444
Q ss_pred HHHHhhcCC
Q 016986 222 CLAMVFCAE 230 (379)
Q Consensus 222 ~~~~~~~~e 230 (379)
+...+++|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 444456774
No 228
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=8.2e-09 Score=89.95 Aligned_cols=177 Identities=17% Similarity=0.066 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHH------HHHHHHH-HHHHHHHHHhHHhhhccchhHHHHHH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAE------GLVVSMC-LGGAFIGSTLSGWIADGVGRRRAFQL 123 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~s~~-~~~~~i~~~~~g~l~d~~Grr~~l~~ 123 (379)
+.++..+...|+........+.....+.+..+..+++... +....+. .+++..+-.+...++|+.|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5566677777877777777788888888877775444321 1111111 12223355666789999999999999
Q ss_pred HhHHHHHHHHHHhcccc-h-------HHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHh
Q 016986 124 CALPMIIGASISATTRN-L-------IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (379)
Q Consensus 124 ~~~~~~~~~~~~~~~~~-~-------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 195 (379)
|.+++++..+..+...| . ....+..++.-+|-+ .....+.+|.+|.+.|+..-|+..+..-+|++++..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999999999888766 1 222223344433322 234467789999999999999999999999999999
Q ss_pred hcccccc-----cchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 196 IGIPVKE-----IAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 196 ~~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
.-.++.+ ..+ -|+.+++.+....+..+..+++||+
T Consensus 461 ~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPET 500 (538)
T ss_pred HhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeecc
Confidence 8888887 556 7999999888888888888889988
No 229
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=1.8e-06 Score=77.25 Aligned_cols=107 Identities=12% Similarity=-0.088 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCC
Q 016986 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 173 (379)
.++.+..+.+++++.+.+.|+.|.|..++++..+.....+..-+-+ -+-++++-.+.|+|.+..+...-.|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6677777889999999999999999999999999888777665554 566788899999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 174 VRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 174 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
.+.+..++.-.....+.++|..+-..+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 9999999988888888888766544443
No 230
>PRK11462 putative transporter; Provisional
Probab=98.75 E-value=5.9e-07 Score=82.62 Aligned_cols=111 Identities=16% Similarity=0.020 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhccc--chHHHHHHHHHHHhhhchhhHHHHHHHHh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 168 (379)
+.+.+.+.++..++.+++++++||+|+|+++..+..+..+..++..+.+ +...+++.-++.|++.+...+...++++|
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888899999999999999999988765554444333333322 23234445566788877777777788888
Q ss_pred hcC-------CCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 169 VSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 169 ~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
..+ .++-|...+......-+|..+++.+++.+.
T Consensus 346 ~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 346 TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765 222344456666667777777766665544
No 231
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.68 E-value=9.9e-08 Score=63.62 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=73.3
Q ss_pred HhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchH
Q 016986 63 FGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI 142 (379)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 142 (379)
.+..+..+.|.+|.+++|.++|.++. |++.+..++||.+|.+...++.++..+++.+..+++...+..+.+++.++++
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~a--g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQA--GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 35566678899999999999998888 9999999999999999999999999999999999999999999999998877
Q ss_pred HHH
Q 016986 143 GML 145 (379)
Q Consensus 143 ~l~ 145 (379)
...
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 653
No 232
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.67 E-value=7.8e-07 Score=82.28 Aligned_cols=110 Identities=9% Similarity=0.012 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHH-------HHHHhHHHHHHHHHH-----hcc-----cchHHHHHHHHHHHh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRA-------FQLCALPMIIGASIS-----ATT-----RNLIGMLLGRFVVGT 153 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~-------l~~~~~~~~~~~~~~-----~~~-----~~~~~l~~~r~l~G~ 153 (379)
+++.+...+...+..++.+++.||+|+|+. +.+|+++.+++.+.. .++ .++++++...++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 466677777777899999999999999963 667777766665422 121 357778888999999
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccc
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (379)
|.+...+....++.+..|++.++.+++++.....+|..++..++...
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998888777544
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.66 E-value=8.7e-07 Score=67.50 Aligned_cols=107 Identities=17% Similarity=0.090 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC
Q 016986 93 VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP 172 (379)
Q Consensus 93 ~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 172 (379)
-.++......+.+++.+.+.+++|.|+.+++|.+...+-... -+-++.+.++.+-++.|++.+..++....++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 355566667788899999999999999999999998865443 3567788899999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhcccc
Q 016986 173 FVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (379)
Q Consensus 173 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (379)
++|++..+++-.....+.++|.++.-.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888877777665443
No 234
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.66 E-value=8.6e-08 Score=85.64 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=82.4
Q ss_pred chhhhh-hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc--cc--chHHHHH
Q 016986 72 EPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT--TR--NLIGMLL 146 (379)
Q Consensus 72 ~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~--~~--~~~~l~~ 146 (379)
...|.+ .+.+|.+..+. +++.+.+.+...++.++.|+++||+|||+.+..+......+..+..+ .+ +.....+
T Consensus 246 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (366)
T TIGR00886 246 SIFAMFFKDQFGLSKVTA--GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIV 323 (366)
T ss_pred HHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 344444 45678876666 88888899999999999999999999998887777666665554443 32 5555555
Q ss_pred HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHH
Q 016986 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG 189 (379)
Q Consensus 147 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 189 (379)
.-.+.+++.|...+....++.|..| +++|.+.|+.+....+|
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 324 LFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 5555555566666666778888887 68999999988766554
No 235
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.58 E-value=1.8e-06 Score=81.07 Aligned_cols=139 Identities=17% Similarity=0.145 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHH---HHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 93 VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIG---MLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 93 ~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
................+.+.|++|||.....+.++..++.+..++..+... ..+...+...+.+..+.....+.+|.
T Consensus 355 ~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 434 (521)
T KOG0255|consen 355 NFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAEL 434 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334444455566666689999999999999999999999999988765543 45555566666666677778999999
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCCh
Q 016986 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (379)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 232 (379)
+|...|+.+.+.......+|.+++|.+..........+.... +.....+...+...++||+.
T Consensus 435 ~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 435 IPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccC
Confidence 999999999999999999999999988755444221122222 22333333444457889884
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.56 E-value=1.2e-06 Score=75.66 Aligned_cols=157 Identities=14% Similarity=0.130 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHH
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~ 128 (379)
.+.+..-.++.|+.--........++.+.+| .|.+..+. +...+.+..+..+|.++..++..|+-..|.+....++.
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~a--a~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ 312 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQA--AYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIA 312 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 3444455566666666666667777777777 66655555 78899999999999999999999999999999999998
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhH
Q 016986 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (379)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr 208 (379)
.+.++..+++++...+ .+-++.|+..+..+|...+.-.+..|++ ....+..-+...+|.++.|.+.|++.+..+ -.
T Consensus 313 ill~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~g-~~ 388 (422)
T COG0738 313 ILLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMFG-IQ 388 (422)
T ss_pred HHHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecchHHHHHHHHHHHhhh-hH
Confidence 9989999999995544 3467788889999999999999999833 344444445567788889999999999888 35
Q ss_pred HHHH
Q 016986 209 ICFW 212 (379)
Q Consensus 209 ~~f~ 212 (379)
..+.
T Consensus 389 ~~~~ 392 (422)
T COG0738 389 LTFL 392 (422)
T ss_pred HHHH
Confidence 5555
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.52 E-value=9.2e-06 Score=70.90 Aligned_cols=146 Identities=15% Similarity=0.210 Sum_probs=117.2
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc-cchhHHHHHHHhHHHHHHHHH---HhcccchHHHHHHHHHHHh
Q 016986 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASI---SATTRNLIGMLLGRFVVGT 153 (379)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~ 153 (379)
.+-||++..+. ..+......|..++....|++.. |.++|+.-..|+....++..+ .+...+.+.+...-++.|+
T Consensus 236 g~Vfgmsv~eT--T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~ 313 (403)
T PF03209_consen 236 GEVFGMSVGET--TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGL 313 (403)
T ss_pred hHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 45689988887 78899999999999999998777 788888877777776666554 4556788889999999999
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch---------hhHHHHHHHHHHHHHHHHH
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---------WWRICFWVSIVPAAILCLA 224 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---------~wr~~f~~~~~~~~~~~~~ 224 (379)
+.|.+.....+..-|...+++.|..+|.++....+...++..+++.+.+... .|-..|.+-++..++.+++
T Consensus 314 g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887754321 1566676665555555444
Q ss_pred H
Q 016986 225 M 225 (379)
Q Consensus 225 ~ 225 (379)
.
T Consensus 394 l 394 (403)
T PF03209_consen 394 L 394 (403)
T ss_pred H
Confidence 3
No 238
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.49 E-value=6.3e-05 Score=67.56 Aligned_cols=299 Identities=15% Similarity=0.045 Sum_probs=148.3
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHH----HHHHHHHHHhHHhhhccchhHHHHHHHhHHHHH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC----LGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~----~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 130 (379)
.+....++...+.-+.....+.+..+...+ .. +..++| .+...+.++..|.+.||..|.++.-.+.+..-+
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~--sL---l~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPG--SL---LPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNL 80 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--Cc---HHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHH
Confidence 344555555555555455555555555321 11 233333 345567888889999999999987777555433
Q ss_pred HHHHHh------cc--c----chHHHHHH---HHHHHhhhchh-hHHHHHHHHhhc------CCCcchhHHHHHHHHHHH
Q 016986 131 GASISA------TT--R----NLIGMLLG---RFVVGTGMGLG-PTVAALYVTEVS------PPFVRGTYGAFIQIATCL 188 (379)
Q Consensus 131 ~~~~~~------~~--~----~~~~l~~~---r~l~G~~~~~~-~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~ 188 (379)
+..+.+ +. + +-+....+ -.+.|.-.-.. .....+.-.||. +++.+.+..+...-.--+
T Consensus 81 sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 322221 11 1 11222111 12222211111 111222233453 234455566666666667
Q ss_pred HHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH-Hhh----cCCChhHHHHcCChHHHHHHHHHHhCCCchhHHHHH
Q 016986 189 GLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-MVF----CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE 263 (379)
Q Consensus 189 g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~----~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (379)
..+++|++.|.+.+..+ .+....+.+...++..++ +++ +...|+- ..+++.++.....+.. ...........
T Consensus 161 ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L-~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 237 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVEYFLLARVYNSVPAL-AVKKRSSESESSSDEE-SSSESSSDPSI 237 (432)
T ss_pred HHHHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHh-cCCCCCcccccccccc-ccccccchhhH
Confidence 78999999999988777 566666555555544332 221 2233321 1111111111000000 00000000000
Q ss_pred HHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Q 016986 264 LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMV 343 (379)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 343 (379)
.....+.-.....+|+..++.+.+...+...++++. ..+.......|+... +.++...|..-....+.++.|.++..+
T Consensus 238 ~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~ 315 (432)
T PF06963_consen 238 LKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPW 315 (432)
T ss_pred HHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111123456777777766665555555443 333334444444332 444444566777788888899999999
Q ss_pred HHHhhCchHHHHHHHHHHHH
Q 016986 344 LMDKLGRKALLQWSFFSMVI 363 (379)
Q Consensus 344 l~d~~g~~~~~~~~~~~~~i 363 (379)
+.+|+|..+.-.++...-.+
T Consensus 316 l~~riGlvr~G~~~l~~q~~ 335 (432)
T PF06963_consen 316 LMKRIGLVRAGLWSLWWQWV 335 (432)
T ss_pred HHHHhcchhhHHHHHHHHHH
Confidence 99999987776665554433
No 239
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.43 E-value=0.00044 Score=63.32 Aligned_cols=285 Identities=9% Similarity=0.065 Sum_probs=151.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccC---CcchhHHHHHHHHHHH-HHHHHHHhHHhhhccchhHHHHH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGF---NGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAFQ 122 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~d~~Grr~~l~ 122 (379)
+..++.++.+.+..++..++.+..- .+++.+=+ ..+.. ..+-....+ +..+...+..+++++++|.+++-
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR----~~KD~lvvt~~gae~I--~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILR----DLKDTLVVTAQGAEVI--PFLKVWGVLPVAILFTILYSKLSNRLSREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HhcCeEEEecCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 3446666666666666666654332 23332211 11222 344332222 44566778899999999999988
Q ss_pred HHhHHHHHHHHHHhcc--c-------c----------------------hHHHHHHHHHHHhhhchhhH-HHHHHHHhhc
Q 016986 123 LCALPMIIGASISATT--R-------N----------------------LIGMLLGRFVVGTGMGLGPT-VAALYVTEVS 170 (379)
Q Consensus 123 ~~~~~~~~~~~~~~~~--~-------~----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~ 170 (379)
+....+.....++++. | + .|...+..+..-+-.....+ .-..+..|.+
T Consensus 94 ~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~it 173 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEIT 173 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8777766666665542 1 1 23333333444443344443 4688899999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhcccccc--------cchhhHHHHHH-HHHHHHH---HHHHHhhcCCChhHHHHc
Q 016986 171 PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE--------IAGWWRICFWV-SIVPAAI---LCLAMVFCAESPHWLYKK 238 (379)
Q Consensus 171 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------~~~~wr~~f~~-~~~~~~~---~~~~~~~~~e~p~~~~~~ 238 (379)
+.+|-.|..++.+.+.++|.+++..+...+.+ ..+.|...... .++..+. ......++.+.. ..+
T Consensus 174 t~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~v---l~~ 250 (491)
T PF03219_consen 174 TVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNV---LTD 250 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cCc
Confidence 99999999999999999999988888777766 11125544322 2122211 112222221100 000
Q ss_pred CChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH
Q 016986 239 GRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS 318 (379)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
++..+. ...++.++.+..-..+.+.++++|......+..+.+...........-......+.+
T Consensus 251 ~~~~~~-----------------~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~ 313 (491)
T PF03219_consen 251 PRFYPS-----------------AKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPD 313 (491)
T ss_pred cccchh-----------------hhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 000000 000011112223345567778888877766655555444333222222222222111
Q ss_pred cCCC---hhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHH
Q 016986 319 AGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (379)
Q Consensus 319 ~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 357 (379)
...- .|......++..++..++++.+.+|+|-+....+.
T Consensus 314 ~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 314 PNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 1000 23445556777777778889999998876655543
No 240
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.38 E-value=2.5e-05 Score=70.98 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=88.6
Q ss_pred chhhhhh-hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHh-----cccchHHHH
Q 016986 72 EPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-----TTRNLIGML 145 (379)
Q Consensus 72 ~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~l~ 145 (379)
...|.+. +.+|.+..+. ++.......+..++..+.+.+.++.++++.......+..++.++.. ..+++...+
T Consensus 239 ~~~P~~l~~~~g~s~~~~--gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~ 316 (413)
T PRK15403 239 AVSPVILIDAGGMTTSQF--AWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSV 316 (413)
T ss_pred HhChHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHH
Confidence 3456454 4557876666 7877777778888888888876544443333222222222222221 233444456
Q ss_pred HHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 146 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
+..++.++|.+...+...... ..-.+..+|++.++.+.....+..+++..++++..+.. ++.|...++...
T Consensus 317 ~~~~l~~~G~~~~~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~ 387 (413)
T PRK15403 317 LGTSLYAFGIGLIFPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGG--RLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHhHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--chHHHHHHHHHH
Confidence 778888998888887776433 22223458999999999888888888888888866643 556655444433
No 241
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.36 E-value=8.5e-06 Score=74.35 Aligned_cols=140 Identities=14% Similarity=0.059 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHhHHhhhccch-hHHHHHHHhHHHHHHHHHHhcccc---------------------hHHHHHHHH
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISATTRN---------------------LIGMLLGRF 149 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~~G-rr~~l~~~~~~~~~~~~~~~~~~~---------------------~~~l~~~r~ 149 (379)
+....+.+...+.+++..++.+++| ||++..++.++.+++.+...+.++ .+..++.-.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 4444555555677788889999999 577778998888888777665442 366777889
Q ss_pred HHHhhhchhhHHHHHHHHhhcCC--CcchhHHHHHHHHHHHHHHHHHhhcccccccch-hhHHHHHHHHHHHHHHHHHHh
Q 016986 150 VVGTGMGLGPTVAALYVTEVSPP--FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAMV 226 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~ 226 (379)
+.|+..+.....-++++++..++ ++.|..+|+.+.+..+..++..+..+.+.+..| .-.+.+.++++..++..+..+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 455999999999999999999887777554443 235677778888877766654
Q ss_pred -hcCCC
Q 016986 227 -FCAES 231 (379)
Q Consensus 227 -~~~e~ 231 (379)
.+|++
T Consensus 469 ~~~~~~ 474 (477)
T TIGR01301 469 ILLPRP 474 (477)
T ss_pred HhCCCC
Confidence 46654
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.32 E-value=2.1e-06 Score=56.91 Aligned_cols=68 Identities=24% Similarity=0.342 Sum_probs=57.4
Q ss_pred HHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHH
Q 016986 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (379)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~ 127 (379)
...++.....+...|++|...++.|++..+. |.+.++..+...++++++|.++||+|+++..+.....
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~i--Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQI--GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 4455555666777889999999999988887 9999999999999999999999999998887776554
No 243
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.30 E-value=0.0022 Score=57.55 Aligned_cols=288 Identities=12% Similarity=0.061 Sum_probs=160.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCc-chhHHHHHHHHHHH-HHHHHHHhHHhhhccchhHHHHHHH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNG-NTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAFQLC 124 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~s~~~~-~~~i~~~~~g~l~d~~Grr~~l~~~ 124 (379)
+..+..++.+.+..++..++.+ .+-.+++.+.++. +....+++-+..-+ +..+..++.+++++++-|.+++-.-
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 3446666666666666666554 3445566665542 22222666666666 6678889999999999999999887
Q ss_pred hHHHHHHHHHHhcc---------cc-----------------------hHHHHHHHHHHHhhhchhhH-HHHHHHHhhcC
Q 016986 125 ALPMIIGASISATT---------RN-----------------------LIGMLLGRFVVGTGMGLGPT-VAALYVTEVSP 171 (379)
Q Consensus 125 ~~~~~~~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~ 171 (379)
+..+....+++++. ++ .|...+...+.-+-.+.... .-.....|.+.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77777777776652 11 13333334444443344443 45678889999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhcccccccchh---------hHHHHHHHHHHHHHHHHHHhh----cCCChhHHHHc
Q 016986 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW---------WRICFWVSIVPAAILCLAMVF----CAESPHWLYKK 238 (379)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~---------wr~~f~~~~~~~~~~~~~~~~----~~e~p~~~~~~ 238 (379)
.+|-.|..++++.+.+++..++..+..++.++... -+..+.+.+..+++++.+..+ ..++|+...++
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~ 258 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRA 258 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHH
Confidence 99999999999999999999988888888775431 122233333333333333322 22333221111
Q ss_pred CChHHHHHHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHH
Q 016986 239 GRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS 318 (379)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (379)
.+.+ +.++.+..-..+.+-+.++|..+...+...++..+...... .|-..+...
T Consensus 259 ~~kk-----------------------~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~---~wKs~ik~~ 312 (509)
T COG3202 259 KKKK-----------------------KKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEG---VWKSGIKEL 312 (509)
T ss_pred hccc-----------------------ccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH---HHHHhHHHh
Confidence 0000 00111122234566677777777666555555443322222 122222111
Q ss_pred cCCC------hhHHHHHHHHH-HHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Q 016986 319 AGLS------SGLANVFVGIA-NLLGSVVAMVLMDKLGRKALLQWSFFSMVIC 364 (379)
Q Consensus 319 ~~~~------~~~~~~~~~~~-~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~ 364 (379)
.+.. .|......++. .++...+++-+.+|.|=....++.-+.+.++
T Consensus 313 ~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 313 YPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1111 22344445555 5556778888888888655555444444444
No 244
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.27 E-value=0.00018 Score=61.88 Aligned_cols=151 Identities=13% Similarity=0.108 Sum_probs=100.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc-----cchhHHHH
Q 016986 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRAF 121 (379)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-----~~Grr~~l 121 (379)
+...+.+..+.+.+.+.+.-.+... .+|.+.+.-|.|.++. +...-++ .- ..--+.|.++.| |+||||..
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a~fS~ay-~P-~sLKllWaPiVDs~y~k~~GrrksW 101 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--AIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKSW 101 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhh--hhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccce
Confidence 3345566666677777888777777 8898888777776655 3322222 11 234568899999 99999876
Q ss_pred HH-HhHHHHHHHHHHhc-----------ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHH
Q 016986 122 QL-CALPMIIGASISAT-----------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG 189 (379)
Q Consensus 122 ~~-~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 189 (379)
++ +..+.+..+...+. .++...+....++.-+.++.--.+.-.+.-.+..+++-|.+......+...|
T Consensus 102 vvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~G 181 (510)
T KOG3574|consen 102 VVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAG 181 (510)
T ss_pred eeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhh
Confidence 55 55555555554443 2344445455566666666666666677777788889999988888888888
Q ss_pred HHHHHhhcccccc
Q 016986 190 LMGSLLIGIPVKE 202 (379)
Q Consensus 190 ~~~~~~~~~~l~~ 202 (379)
.+++..+--.+.+
T Consensus 182 yfL~~~ifLaL~s 194 (510)
T KOG3574|consen 182 YFLGNVVFLALES 194 (510)
T ss_pred HHhhcceeeEecC
Confidence 8887766544443
No 245
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.25 E-value=1.9e-05 Score=73.48 Aligned_cols=147 Identities=16% Similarity=0.073 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHhhhhccccchhhhhhh-hccCCcch-hHHHHHHHHHHHHHHHHHHhHHhhhccchh-HHHHHHHhHH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNT-LAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALP 127 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~~ 127 (379)
+.+....+..++.++.......+.|.... -|+-+... ...++....+.++..+++.+.|.+..+++| |+.++++.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 34444445556666555555556665543 34333221 122678888888889999999999988886 5555677766
Q ss_pred HHHHHHHHhc--ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc
Q 016986 128 MIIGASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (379)
Q Consensus 128 ~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (379)
+.+++.+++. .+|....++.-++.|++.|...........-..|+++-+.+.++....-.+|..+|..+.
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 6654444333 356666677889999999998888877777788999999999998888888777766553
No 246
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.19 E-value=1.3e-05 Score=67.86 Aligned_cols=261 Identities=12% Similarity=0.074 Sum_probs=152.8
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchh
Q 016986 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLG 158 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 158 (379)
.+-|++.++.. .=+.-+..-.+.+.-.+.=.+.|..--|++++.-.+.....-.+.-+.++.+.+-+.-++.|...+ .
T Consensus 34 p~~NlT~~~l~-~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-a 111 (433)
T KOG3810|consen 34 PDKNLTEDQLT-NEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-A 111 (433)
T ss_pred CCCCccHHHHh-cccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-H
Confidence 44566654442 222333344455666666678999999999988777777777778889999999999999998554 4
Q ss_pred hHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh-hHHHHHHHHHHHHHHHHHHhhcCCChhHHHH
Q 016986 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCLAMVFCAESPHWLYK 237 (379)
Q Consensus 159 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~ 237 (379)
..+-++++-+..+++++.++.+......-.|..+|..++..+.+.... +...-.+......+..+...++|..++....
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f 191 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYF 191 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhh
Confidence 557788888889999999999999999999998888888887765531 3344444444444555566777776543332
Q ss_pred cCChHHHH-HHHHHHhCCCchhHHHHHHHhhhcCCCCCcchhhhhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHH
Q 016986 238 KGRTAEAE-AEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF 316 (379)
Q Consensus 238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (379)
+.+.++.. ...+......+..... ...-..-..++.+..+||......+...+..+ ++.-...|.+...
T Consensus 192 ~~~~~~~~v~~~e~~~~~~~~~~~l------~~~~~~l~~~l~~~y~np~ll~WSlWwAl~sc----g~~QV~nY~Q~LW 261 (433)
T KOG3810|consen 192 HRLEDKISVGDLEEMNPQASYMSYL------RGAFVLLWRDLQECYSNPRLLKWSLWWALASC----GYYQVTNYTQILW 261 (433)
T ss_pred hcccccceeccchhcCccchhhHHH------HHHHHHHHHHHHHHhcCchhhhhHHHHHHhhc----hhHHHHHHHHHHH
Confidence 22222110 0000000000000000 00000012234455666665444333333332 2333444555544
Q ss_pred HHc-CCC----hhHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 016986 317 KSA-GLS----SGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (379)
Q Consensus 317 ~~~-~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 351 (379)
+.. +.. .|..=+...+.++++.+..|.+.-++.|+
T Consensus 262 ~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~ 301 (433)
T KOG3810|consen 262 KEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW 301 (433)
T ss_pred HhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchh
Confidence 443 211 34455566677788888899887766665
No 247
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.16 E-value=3.4e-05 Score=70.70 Aligned_cols=159 Identities=17% Similarity=0.061 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhh-ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc----chhHHHHHHHhH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQLCAL 126 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~----~Grr~~l~~~~~ 126 (379)
.+...++..++.....+.+...+|.+.++ .|.+..+. +.+...+.++.+++.+++|+++|| ..+|......+.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a--~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQA--NLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHh--ccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 44556666677777777778888888888 34554444 788999999999999999999999 777777777666
Q ss_pred HHHHHH-HHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCc-chhHHHHHHHHHHHHHHHH-Hhhccccccc
Q 016986 127 PMIIGA-SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV-RGTYGAFIQIATCLGLMGS-LLIGIPVKEI 203 (379)
Q Consensus 127 ~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~-~~~~~~l~~~ 203 (379)
+..+.. +.....++.......-+....+.....+.......+....+. |-...+....+.+.+.+++ +..-+.....
T Consensus 352 ~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~ 431 (495)
T KOG2533|consen 352 LYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR 431 (495)
T ss_pred HHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc
Confidence 655544 444444444444444444444555666677777777775443 3344444555555554444 4444444444
Q ss_pred chhhHHHHHH
Q 016986 204 AGWWRICFWV 213 (379)
Q Consensus 204 ~~~wr~~f~~ 213 (379)
.. |...|..
T Consensus 432 y~-~~~~f~~ 440 (495)
T KOG2533|consen 432 YG-WGAVFYM 440 (495)
T ss_pred hh-hhhHHHH
Confidence 55 7778744
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=6.4e-05 Score=68.39 Aligned_cols=124 Identities=15% Similarity=0.087 Sum_probs=106.2
Q ss_pred hhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHH-hhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHh
Q 016986 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSG-WIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (379)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g-~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 153 (379)
-.+...++++.++. +...+.......+++.+.. .+...+|-|++...|+....+..+..+++++.|++.....+.++
T Consensus 266 ~yl~~~f~w~~~~~--s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~ 343 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEF--SDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVAL 343 (463)
T ss_pred EEEeeecCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHh
Confidence 34566788877776 7777777777777777777 78888999999999999999999999999999999999888887
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
.+...|...+.++.+..++++|++.++......+...++|.+-+.+.
T Consensus 344 -~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 344 -AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred -hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 66778888999999999999999999999999999888888766554
No 249
>PTZ00207 hypothetical protein; Provisional
Probab=98.11 E-value=0.00013 Score=68.29 Aligned_cols=172 Identities=13% Similarity=-0.038 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHhhhhccccchhhhhhhhc-cCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc---------chhHHHH
Q 016986 52 HVLVATLSSFLFGYHLGVVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG---------VGRRRAF 121 (379)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~---------~Grr~~l 121 (379)
.+++++...++..-....+..-+.+|.+.+ |.+.+......+.+++.++.++|-+..|.++.. +.|--.+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIAL 433 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHH
Confidence 445555555554444334444566777887 653322100237888888999999998887721 2222233
Q ss_pred HHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHH-Hhhcccc
Q 016986 122 QLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS-LLIGIPV 200 (379)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~l 200 (379)
.+..+ +.++.++.++.-....+++.-++.|++.|..+++....++|+|. |+-|+-..+......+|..+- -.+.|.+
T Consensus 434 ~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 434 FIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred HHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 34444 66666666665444789999999999999999999999999999 888998888888888886654 4555555
Q ss_pred cccch----h--------hHHHHHHHHHHHHHHHHHH
Q 016986 201 KEIAG----W--------WRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 201 ~~~~~----~--------wr~~f~~~~~~~~~~~~~~ 225 (379)
.+... . .|..|++.+..+++..+.-
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s 548 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITS 548 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHH
Confidence 53321 1 6788888777666665543
No 250
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.08 E-value=0.00018 Score=66.05 Aligned_cols=110 Identities=19% Similarity=0.161 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchh--H----HH-HHHHhHHHHHHHHHHhcc---------cchHHHHHHHHHHHhh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGR--R----RA-FQLCALPMIIGASISATT---------RNLIGMLLGRFVVGTG 154 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Gr--r----~~-l~~~~~~~~~~~~~~~~~---------~~~~~l~~~r~l~G~~ 154 (379)
+|..++..+...+.+|+.+++=.|.+| | +. +.+|+++.+++.+...++ .+.+++++..+++++|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 688888888888888887777555532 1 11 566777777776555321 3677888999999999
Q ss_pred hchhhHHHHHHHHhhcCCCcchhHHHHHHHH-HHHHHHHHHhhcccc
Q 016986 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIA-TCLGLMGSLLIGIPV 200 (379)
Q Consensus 155 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l 200 (379)
+=...|+..+++++..|+|.||..+|.+... ..+|..++..+++..
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999764 367777766665544
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.03 E-value=8e-05 Score=64.16 Aligned_cols=124 Identities=14% Similarity=0.043 Sum_probs=106.1
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccch--hHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhc
Q 016986 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 156 (379)
+.+|.++.+. |-+.+...+..++.+....+..||.. -+-.+..++.+..=..++.+.++....+..+-.+-.+..+
T Consensus 290 ~rfg~ss~~~--G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGYSSMQQ--GKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCCChhhh--eeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 6677776665 77777777888888888889999988 7777888888777777788889988888888889888888
Q ss_pred hhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccc
Q 016986 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (379)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (379)
...+....++....|+++||..+|+......++-++||+++|.+....
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 888888899999999999999999999999999999999998776543
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.97 E-value=0.00011 Score=65.84 Aligned_cols=108 Identities=11% Similarity=0.155 Sum_probs=87.1
Q ss_pred HHHHHHhHHHHHHHHHHhcc---cc------hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCC---cchhHHHHHHHHH
Q 016986 119 RAFQLCALPMIIGASISATT---RN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF---VRGTYGAFIQIAT 186 (379)
Q Consensus 119 ~~l~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 186 (379)
|+++++.++..+|.++..++ .+ .+.++++-.+.++|.|+.-|...++.+|.++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46777888888888774333 22 367888899999999999999999999999765 4667788899999
Q ss_pred HHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhh
Q 016986 187 CLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF 227 (379)
Q Consensus 187 ~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 227 (379)
++|..++..+.+++.++.+ |.+.|.+.++..++.++.++.
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999998 999999988877777665544
No 253
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.00022 Score=58.48 Aligned_cols=98 Identities=19% Similarity=0.307 Sum_probs=69.5
Q ss_pred ccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHH
Q 016986 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (379)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 149 (379)
.+|+.-.+-+.++....++ |.+.-.-+-...+...+.|-++|+-|||+.-+.-++.+.+++ +.-.++.|-.++++|+
T Consensus 56 QgPYvYyLYstYgFgkG~I--gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~ 132 (454)
T KOG4332|consen 56 QGPYVYYLYSTYGFGKGDI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRV 132 (454)
T ss_pred cCceeeeeehhcCccCCcc--ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhh
Confidence 3566666777888877776 555544444556777888999999999996544444433332 3456788999999999
Q ss_pred HHHhhhchhhHHHHHH-HHhhc
Q 016986 150 VVGTGMGLGPTVAALY-VTEVS 170 (379)
Q Consensus 150 l~G~~~~~~~~~~~~~-i~~~~ 170 (379)
+-|+..+..+....++ +.|.-
T Consensus 133 LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhh
Confidence 9999998888776554 44544
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.84 E-value=0.0004 Score=61.48 Aligned_cols=130 Identities=16% Similarity=0.105 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC
Q 016986 93 VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP 172 (379)
Q Consensus 93 ~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 172 (379)
+.-+-.+...+..+.+.+..+|+..+.=...+.++..++.++.++++|.+.-+++-++.+++.|........+ +..+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc
Confidence 3444444555666777788888765444456667888889999999999999999999999999998887776 446654
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhcccccccch-hhHHHHHHHHHHHHHHHHHHhhc
Q 016986 173 FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 173 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
...+.+..+.+.+.++|+..-..+.+ .+ .-|..+++.....++..+.++++
T Consensus 143 ----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred ----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 34677778888788888776655554 33 13666666655555555554443
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.78 E-value=0.00035 Score=61.78 Aligned_cols=107 Identities=19% Similarity=0.193 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH--HHHHH---HHHHhcccchHHHHHHHHHHHhhhchhhHHHHHH
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL--PMIIG---ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALY 165 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~--~~~~~---~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 165 (379)
.+....|.+|..++.--...+ |+ |++.+.+.+ +..+. ....-+.++.+..++.-+..|+..|..+.-....
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~ 359 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYR 359 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 566777777766554322211 33 333333322 22222 2233456889988899999999999999999999
Q ss_pred HHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 166 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
+.|-.++++|..+++..+.+.++|..++.+++-.+.
T Consensus 360 I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 360 ISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988876553
No 256
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0011 Score=62.02 Aligned_cols=174 Identities=16% Similarity=0.197 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHhhh-hccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhH
Q 016986 49 SFPHVLVATLSSFLFGYH-LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCAL 126 (379)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~ 126 (379)
.|+....+.....+..+. .+.....+..+.+++|.+...+ .-..+.+.-......+..++++|- +||-+++.++.+
T Consensus 35 ~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~a--a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~ 112 (571)
T KOG1237|consen 35 GWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGA--ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSL 112 (571)
T ss_pred hhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 344443333333333332 2445667788888999876544 566777777777888999999996 589999999988
Q ss_pred HHHHHHHHHhcccc-------------------------hHHHHHHHHHHHhhhchhhHHHHHHHHhhcC---C-C--cc
Q 016986 127 PMIIGASISATTRN-------------------------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP---P-F--VR 175 (379)
Q Consensus 127 ~~~~~~~~~~~~~~-------------------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~-~--~r 175 (379)
+..++.++...+.. ...+..+.-+..+|.|+.-+...++-+|-++ + + .+
T Consensus 113 i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 113 ISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 88887655433211 1245566777888999999999999999998 2 2 23
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Q 016986 176 GTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (379)
...+.++....++|..++..+..+..++.+ |.+.|.+..+...+.++++
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIF 241 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHH
Confidence 367888999999999999999888888888 9999988766666555544
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.60 E-value=0.00036 Score=46.25 Aligned_cols=65 Identities=9% Similarity=0.087 Sum_probs=45.2
Q ss_pred HHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHH
Q 016986 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (379)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 360 (379)
++++....+...+++.|+.+ .+.+..+.|.+..+..+..+++.++.|.++||.++++.......+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34444444444444554443 344555677888899999999999999999999998877655544
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.46 E-value=0.0088 Score=53.97 Aligned_cols=108 Identities=16% Similarity=0.059 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhH-------HHHHHHhHHHHHHHHHHhcc----------cchHHHHHHHHHHHh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR-------RAFQLCALPMIIGASISATT----------RNLIGMLLGRFVVGT 153 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G~ 153 (379)
++..+...+.-.+.+++..++-.+.++| .=+-+|+.+.+.+.++.... .+.++++...+++++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5888888888888888888877775544 22344555555555544332 367889999999999
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcc
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 198 (379)
|+=+..|+..++++...|++-.+.+++.+-.....|..++..+.+
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 999999999999999999999999999988888888887777766
No 259
>PRK03612 spermidine synthase; Provisional
Probab=97.29 E-value=0.033 Score=52.05 Aligned_cols=139 Identities=14% Similarity=0.007 Sum_probs=77.0
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhH-HHH-HHH-HH---HhcccchH-HHHHHHHHHH
Q 016986 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMI-IGA-SI---SATTRNLI-GMLLGRFVVG 152 (379)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~-~~~-~~~-~~---~~~~~~~~-~l~~~r~l~G 152 (379)
-+|-+... .+.+.+++..|.++|+.+.+++.++.-|+...+-..+ +.+ ++. ++ .++...+. .++..-++.+
T Consensus 44 ~~G~s~~~--~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 44 LLGDSVTQ--FSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HhCchHHH--HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443333 3899999999999999999988744333322211111 111 111 11 11111111 1223345667
Q ss_pred hhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc-ccchhhHHHHHHHHHHHHHH
Q 016986 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-EIAGWWRICFWVSIVPAAIL 221 (379)
Q Consensus 153 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-~~~~~wr~~f~~~~~~~~~~ 221 (379)
+..|...|....+..+... ++-++..|-......+|+++|.++.+.+. ...|..+..+.++.+..++.
T Consensus 122 ~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 7777777777666655332 23456677777888888888888766554 35554566555544443333
No 260
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.25 E-value=0.083 Score=45.13 Aligned_cols=99 Identities=17% Similarity=0.148 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCC--Cc
Q 016986 97 CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP--FV 174 (379)
Q Consensus 97 ~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~ 174 (379)
..+.....+.+.+.+..++|-|+++.++....... +..-+-+.+..++-.-...|++.++.+..--+|+++.-.. ++
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 34455567777779999999999998887776553 3333456788889999999999999887777777665532 33
Q ss_pred c-------------hhHHHHHHHHHHHHHHHHHhh
Q 016986 175 R-------------GTYGAFIQIATCLGLMGSLLI 196 (379)
Q Consensus 175 r-------------~~~~~~~~~~~~~g~~~~~~~ 196 (379)
| +....+++....+|..+...+
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 3 344556666666676665554
No 261
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.14 E-value=0.039 Score=50.08 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHhHHhhhc---cchhHHHHHHHhHHHHHHHHHHhcc------------------cchHHHHHHHHHHH
Q 016986 94 VSMCLGGAFIGSTLSGWIAD---GVGRRRAFQLCALPMIIGASISATT------------------RNLIGMLLGRFVVG 152 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d---~~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G 152 (379)
.-...++..+++.+.+.+++ ++||++.+.++..+..++.++.-.+ +++....+.-++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 33344555566666777775 5899999999998888887775543 24567777889999
Q ss_pred hhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccc
Q 016986 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (379)
Q Consensus 153 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (379)
++-+......+.++.+.+ +++|..+.+++..-..++..++....+..
T Consensus 365 ~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred hHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999 57789999998888888877766555443
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.09 E-value=0.013 Score=52.92 Aligned_cols=146 Identities=13% Similarity=0.115 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHH
Q 016986 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 133 (379)
+...++..+-+++.-.....+..+...-|+++... |..-+.-.+....+.+...++.+|+|..+.=+.+.....+...
T Consensus 261 flas~alalLY~TVLsf~~lmt~yl~~~G~s~~~i--gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 261 FLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVI--GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 34444444444443334555555555558887777 8888888888899999999999999988887777665443333
Q ss_pred HHh------ccc----chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 134 ISA------TTR----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 134 ~~~------~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
++. -++ +...++.+-.+.=+|.=.+-....-++.|..|+++||...|.-....++-.++-..++-.+.
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 322 112 22223333333333333445566778899999999999999999888888777766655443
No 263
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.92 E-value=0.056 Score=47.88 Aligned_cols=93 Identities=11% Similarity=-0.032 Sum_probs=46.5
Q ss_pred chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
.+...++.-.+.+.+.|..........++. |++.-+..++=.+.+..+-+++--+......+...+=-..|.++.+..+
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~l 194 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILL 194 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHH
Confidence 355566667777888877777666666654 4444332222222222222221112222222222212344555666666
Q ss_pred HHHHHHhhcCCChh
Q 016986 220 ILCLAMVFCAESPH 233 (379)
Q Consensus 220 ~~~~~~~~~~e~p~ 233 (379)
++++.+..+|..|-
T Consensus 195 lC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 195 LCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHhhcchH
Confidence 77777777777664
No 264
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.90 E-value=0.0077 Score=54.31 Aligned_cols=143 Identities=13% Similarity=0.042 Sum_probs=77.2
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhh--ccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc-----cchhHHHHHH-HhH
Q 016986 55 VATLSSFLFGYHLGVVNEPLESISLD--LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRAFQL-CAL 126 (379)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-----~~Grr~~l~~-~~~ 126 (379)
++.+.+++.+.-.+.....+|.+.++ -+.+.++. |..+ ....-+ -.-++|.++.| |+||||..++ .-.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~--~~fS-la~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ--AIFS-LASYPF-SLKLLWAPIVDSVYSKRIGRRKSWIIPIQY 79 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHh--eeee-eeechh-HHHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence 44555666666666555567877777 56665554 3221 111111 12345666665 8999988766 333
Q ss_pred HHHHHHHHHhccc----------------------c--hHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHH
Q 016986 127 PMIIGASISATTR----------------------N--LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI 182 (379)
Q Consensus 127 ~~~~~~~~~~~~~----------------------~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 182 (379)
+.++..+..+..- + ...+....++.=+-.+.--.+.-.+.-....+++++.+....
T Consensus 80 l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcq 159 (544)
T PF13000_consen 80 LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQ 159 (544)
T ss_pred HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHH
Confidence 4444333333221 1 112223332222223332233334444556778899999888
Q ss_pred HHHHHHHHHHHHhhccccc
Q 016986 183 QIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 183 ~~~~~~g~~~~~~~~~~l~ 201 (379)
..+.+.|..++..+--.+.
T Consensus 160 tvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 160 TVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HhHhhhhHHHHHHHHHhhC
Confidence 8888888888776654444
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.90 E-value=0.022 Score=51.98 Aligned_cols=89 Identities=12% Similarity=0.009 Sum_probs=47.8
Q ss_pred chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc----ccccccc-hhh--HHHHH
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG----IPVKEIA-GWW--RICFW 212 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~----~~l~~~~-~~w--r~~f~ 212 (379)
.++..++.-++.|++.+.......++.+ .+|++. +..+..+.+++.+++.++- ....+.. ..+ ...|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 4666667778889988888877777666 455443 4444444444444433321 1111210 102 23344
Q ss_pred HHHHHHHHHHHHHhhcCCChh
Q 016986 213 VSIVPAAILCLAMVFCAESPH 233 (379)
Q Consensus 213 ~~~~~~~~~~~~~~~~~e~p~ 233 (379)
++.+..+++++.+..++..|.
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 455556666666666776654
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.89 E-value=0.0057 Score=50.30 Aligned_cols=56 Identities=11% Similarity=0.056 Sum_probs=35.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhh--cc-cccc-cchhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 173 FVRGTYGAFIQIATCLGLMGSLLI--GI-PVKE-IAGWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 173 ~~r~~~~~~~~~~~~~g~~~~~~~--~~-~l~~-~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
|+|+....+...++++|.++.... -. -..+ ....|++.+.+.+++.++.++++..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777788888887665433 22 1111 11239999988887777666665544
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.86 E-value=0.015 Score=53.18 Aligned_cols=147 Identities=14% Similarity=0.070 Sum_probs=101.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc-c---------cchHHHHHHHHHHH
Q 016986 83 FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-T---------RNLIGMLLGRFVVG 152 (379)
Q Consensus 83 ~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-~---------~~~~~l~~~r~l~G 152 (379)
.++... +.+..+..++..++..+.....-+..-|+++..+.++.++..+.-.. . ++.+-.+.--++..
T Consensus 252 fs~~f~--~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~ 329 (433)
T PF03092_consen 252 FSPSFY--GTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEE 329 (433)
T ss_pred cCHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHH
Confidence 444333 77777778888888888888888888899888888777766554221 1 12222333456666
Q ss_pred hhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchh-------hHHHHHHHHHHHHHHHHHH
Q 016986 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 153 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-------wr~~f~~~~~~~~~~~~~~ 225 (379)
+.....+-....+++|..|+..-|...++.....++|..++..++..+.+..+. -.+..++..+..++.+.+.
T Consensus 330 ~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll 409 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLL 409 (433)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 666667777788999999999999999999999999998888888877654431 1223334445555555555
Q ss_pred hhcCCC
Q 016986 226 VFCAES 231 (379)
Q Consensus 226 ~~~~e~ 231 (379)
.++|++
T Consensus 410 ~lLp~~ 415 (433)
T PF03092_consen 410 FLLPPQ 415 (433)
T ss_pred HHcCCC
Confidence 567765
No 268
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.77 E-value=0.012 Score=53.45 Aligned_cols=68 Identities=16% Similarity=0.093 Sum_probs=56.7
Q ss_pred HhHHHHHHHcCCC-hhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016986 310 YFSSSVFKSAGLS-SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEAFLVL 377 (379)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 377 (379)
.++...++.+..+ .|.+......+..+..+.+|++.||+|.|+.+.++.+...+..++..+.+++..+
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555566 7789999999999999999999999999999999999999999999888776543
No 269
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.71 E-value=0.008 Score=53.62 Aligned_cols=90 Identities=16% Similarity=0.156 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHH---HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Q 016986 289 VVFIGSTLFALQQLSGINAIFYFSS---SVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICS 365 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~ 365 (379)
...+...+....++.=-..++.-.+ +.++......|++.....++..+.++++|++.||++|++++.+|..+..++.
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av 112 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAV 112 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHH
Confidence 3333344444444444444444333 3344455567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhc
Q 016986 366 SISLILEAFLVLV 378 (379)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (379)
+...+...+|.+.
T Consensus 113 ~~~~fs~~Fwq~~ 125 (493)
T KOG1330|consen 113 FASGFSNHFWQVL 125 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998888764
No 270
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.53 E-value=0.0016 Score=58.98 Aligned_cols=98 Identities=10% Similarity=0.119 Sum_probs=70.1
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016986 280 ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (379)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 359 (379)
+++.++....+++...++.+......+.+-.++++. +....--|......-.+.++..+..+++.+|+|+-+++.+++.
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa 444 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA 444 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh
Confidence 566777766666666666655555455554444443 2223334567777778888999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 016986 360 SMVICSSISLILEAFLVLV 378 (379)
Q Consensus 360 ~~~i~~~~~~~~~~~~~~~ 378 (379)
...+=++.....++.|+++
T Consensus 445 ~~~~Rf~~~S~L~n~W~vL 463 (618)
T KOG3762|consen 445 CNVGRFLYYSYLQNPWMVL 463 (618)
T ss_pred HHHHHHHHHHHhcCchhee
Confidence 8888888888888877654
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.45 E-value=0.078 Score=48.41 Aligned_cols=107 Identities=13% Similarity=0.045 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhH--HHHHHHhH--HHHHHHHHHhc---------ccchHHHHHHHHHHHhhhch
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCAL--PMIIGASISAT---------TRNLIGMLLGRFVVGTGMGL 157 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~--~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~~ 157 (379)
-+....|.++-.+|..+..+.. .-++| .+++.+.. ++.-..++|.. -++-+..++.-++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4567777788788777554321 11222 33332222 22222233322 24556677789999999999
Q ss_pred hhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcc
Q 016986 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (379)
Q Consensus 158 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 198 (379)
..+.+..+..+..++++|..+..+...+..+|..+|..++-
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888887654
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.34 E-value=0.0062 Score=54.13 Aligned_cols=151 Identities=16% Similarity=0.100 Sum_probs=86.7
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchh-HHHHHHHhHHHHHHHHHHhc-c---cchHHHHHHHHHHHh
Q 016986 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASISAT-T---RNLIGMLLGRFVVGT 153 (379)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~~~-~---~~~~~l~~~r~l~G~ 153 (379)
..-|.++... |++.....++..+++.+.|.+.||... |.++++......++...... . .+.+.+...-.+.|.
T Consensus 294 ~~sgY~~~~a--G~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 294 CPSGYEGVFA--GYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred ccccCCcccc--chhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 3334443333 899999999999999999999999864 66666666665555322222 1 233445556677888
Q ss_pred hhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch--hhHHHH-HHHHHHHHHHHHHHhhcCC
Q 016986 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG--WWRICF-WVSIVPAAILCLAMVFCAE 230 (379)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~wr~~f-~~~~~~~~~~~~~~~~~~e 230 (379)
+....+|+..-+-.|..-|..-+.-.|+.+....+-..+-..+-+...+..+ +|.... +......++.+++..+++|
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 8888899888888886644444455555544333333333333333333222 133322 2233334444444555555
Q ss_pred C
Q 016986 231 S 231 (379)
Q Consensus 231 ~ 231 (379)
+
T Consensus 452 ~ 452 (480)
T KOG2563|consen 452 D 452 (480)
T ss_pred h
Confidence 4
No 273
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.20 E-value=0.01 Score=53.88 Aligned_cols=76 Identities=13% Similarity=0.190 Sum_probs=59.0
Q ss_pred HHHH-HHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH
Q 016986 144 MLLG-RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (379)
Q Consensus 144 l~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~ 220 (379)
++++ -++.|.+.-.......++-+|...+++++.+.++++.....+..++|++........| .|+.+.+.+...++
T Consensus 390 ~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 390 YLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLV 466 (488)
T ss_pred heeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHH
Confidence 3444 3455776666666778899999999999999999999999999999999888888887 57666664444333
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.98 E-value=0.042 Score=36.92 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=52.1
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 016986 318 SAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEAFLVLV 378 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 378 (379)
.+..+.+++.....++..+|.+...++.++.++++.+..+.+...+..+.+.+.++.+...
T Consensus 24 ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 24 LSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 3444567899999999999999999999998888999999999999999999988877543
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.76 E-value=0.0025 Score=59.60 Aligned_cols=151 Identities=17% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhhhccccchhh-hhhhhccCCcchhHHHHHHHHHHH-HHHHHHHhHHhhhccch--hHHHHHHHhH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVG--RRRAFQLCAL 126 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~d~~G--rr~~l~~~~~ 126 (379)
+.++...++.....+....+..++| .++.+|+.+.+++ +++.++..+ +.++|.+++|.+..|+. .|..+..+.+
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A--~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v 382 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA--SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV 382 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH
Confidence 3445555566666665555666666 4567899987777 566655554 66799999999999875 4454444444
Q ss_pred HHHHHHHHHh---c--c-------------------------------------------------cchHHHHHHHHHHH
Q 016986 127 PMIIGASISA---T--T-------------------------------------------------RNLIGMLLGRFVVG 152 (379)
Q Consensus 127 ~~~~~~~~~~---~--~-------------------------------------------------~~~~~l~~~r~l~G 152 (379)
...+..+... + + +++..+++..++.-
T Consensus 383 ~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~ 462 (539)
T PF03137_consen 383 VSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILS 462 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHH
Confidence 4333332200 0 0 01222333333333
Q ss_pred hhhchhhHHHHHHHHhhcCCCcchhHHHHHHHH-HHHHHHHHHhhccccccc
Q 016986 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIA-TCLGLMGSLLIGIPVKEI 203 (379)
Q Consensus 153 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~ 203 (379)
+..+...+.....+-...|+++|+.++|+.... -.+|.+=||++-|.+.+.
T Consensus 463 ~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 463 FFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 334444444445555777888999999987644 345677778777777664
No 276
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=95.76 E-value=0.14 Score=37.96 Aligned_cols=43 Identities=23% Similarity=0.267 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Q 016986 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICS 365 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~ 365 (379)
.+.......++..++..+.+.+.|..+.+....+......++.
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 4466677788888999999999998887666555444444433
No 277
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.32 E-value=0.02 Score=55.04 Aligned_cols=59 Identities=27% Similarity=0.172 Sum_probs=51.1
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 313 SSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
...++.+..+.|++...+.++.+++.++.+++.||.|||+.+.++.++++++.+++.+.
T Consensus 60 ek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 60 ERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLP 118 (633)
T ss_pred hhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhCh
Confidence 34455566677888899999999999999999999999999999999999999887765
No 278
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.31 E-value=0.086 Score=45.87 Aligned_cols=54 Identities=11% Similarity=-0.024 Sum_probs=42.7
Q ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Q 016986 316 FKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
++....+.+.++..-.....+...+.|.+.||+|||+..+..+++..++++...
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~ 117 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH 117 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh
Confidence 344444566777777788888888999999999999999998888888886543
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.29 E-value=0.73 Score=41.37 Aligned_cols=94 Identities=14% Similarity=0.006 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH--HhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL--CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 168 (379)
|.+-++..+..+++.+..|++..++.+..-+.+ ..++.+...++++..+|.+..+++.++.+...-...++...-++.
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999888887544444 344455566778899999999999988888788888888888888
Q ss_pred hcCCCcchhHHHHHHH
Q 016986 169 VSPPFVRGTYGAFIQI 184 (379)
Q Consensus 169 ~~~~~~r~~~~~~~~~ 184 (379)
....+.-+...|+...
T Consensus 368 ~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 368 NLSEERYALVFGINTF 383 (412)
T ss_pred hccccceeeeeeeHHH
Confidence 8877777777766544
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.98 E-value=0.0084 Score=52.13 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcc-chhHHHHHHHhH-HHHHHHH-HHh----------cccchHHHHHHHHHHHhhhchh
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCAL-PMIIGAS-ISA----------TTRNLIGMLLGRFVVGTGMGLG 158 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~-~~~~~~~-~~~----------~~~~~~~l~~~r~l~G~~~~~~ 158 (379)
.....|.++-.+|....++.--+ -.+|++.+.+.. +..+..+ +|- ..+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34667888888888877653211 134444433221 1112222 221 2234466777789999999999
Q ss_pred hHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccc
Q 016986 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (379)
Q Consensus 159 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (379)
.+..+.+..+..++++|..+..+......+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888776543
No 281
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=93.63 E-value=0.75 Score=38.43 Aligned_cols=68 Identities=15% Similarity=0.162 Sum_probs=51.9
Q ss_pred hchhHHHHhHHHHHHHcCCChh---HHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 303 SGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
+....++.|.++..+..+.+.. .+.....++..+| +..|.+.|++|++..+.+|.+...++..++...
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677888887777666654 4455556666654 788999999999999999999999998877664
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.46 E-value=0.95 Score=40.39 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=74.1
Q ss_pred HHHHHH-HHHHHHHHHHhHHhhhccchhHHHHHHHhH-HHHHHHHHH-------hcccchHHHHHHHHHHHhhhchhhHH
Q 016986 91 GLVVSM-CLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMIIGASIS-------ATTRNLIGMLLGRFVVGTGMGLGPTV 161 (379)
Q Consensus 91 ~~~~s~-~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~-~~~~~~~~~-------~~~~~~~~l~~~r~l~G~~~~~~~~~ 161 (379)
-++..+ |.+...+|.+.+.++-+.= ||...+..+. ...+-.+.. .+-.+-+++++.-.+.|+..|=....
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 455556 7888888877766665554 3433333322 333333332 23456677888899999999988888
Q ss_pred HHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhc
Q 016986 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (379)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (379)
.+.+..+-.+++++-.+..+.......|..+|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 899999999999988888888888888877777653
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.86 E-value=0.03 Score=48.69 Aligned_cols=20 Identities=10% Similarity=0.277 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016986 325 LANVFVGIANLLGSVVAMVL 344 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l 344 (379)
..+..++++..+|+.+.++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 45678899999999988874
No 284
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=92.39 E-value=5.5 Score=32.91 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Q 016986 332 IANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSIS 368 (379)
Q Consensus 332 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~ 368 (379)
+|..++-+-+-+++.|+.-|.+..++.+++.+..+..
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl~~ 287 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFIIFGLVY 287 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHHHHHHH
Confidence 3444444444557788888887777777766654433
No 285
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.26 E-value=0.1 Score=46.77 Aligned_cols=127 Identities=16% Similarity=-0.057 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcC
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 171 (379)
|-..++.+...+.+....+++||+|-|+.+..+...+.++..+.+..++.......|-..|+-.+....+....++++.-
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 33455555666999999999999998877888888788888888999999988888888886666665555555554432
Q ss_pred CC-----------------------cchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHH
Q 016986 172 PF-----------------------VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (379)
Q Consensus 172 ~~-----------------------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 218 (379)
.+ .+|...|+.++...+-.++..+..|.+.+..|+=+.+-+..+..+
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s 485 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVA 485 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHH
Confidence 11 235666677777777777777777777766654455444444333
No 286
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.10 E-value=12 Score=31.67 Aligned_cols=132 Identities=14% Similarity=0.086 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhH--HHHHHHhHHHHHHHHH----Hhcccc---hHHHHHHHHHHHhhhchhhHH
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCALPMIIGASI----SATTRN---LIGMLLGRFVVGTGMGLGPTV 161 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~----~~~~~~---~~~l~~~r~l~G~~~~~~~~~ 161 (379)
|.+.+.++++..+|+-+..++..|-..| +.+.+..+..+....+ ...+++ ...-+++..+.-.+.|..+|.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPS 364 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPS 364 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchH
Confidence 7899999999999999998888765544 3333333333332222 222322 222234444555568889999
Q ss_pred HHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 016986 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (379)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~ 223 (379)
...+=+++.|++.|+..+.++..-.++-..++...--.-....+ -|..|-++.....+..+
T Consensus 365 imkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~-tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 365 IMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTT-TRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccc-cchhhhhhHHHHHHHHH
Confidence 99999999999999999988766555433222211000011122 46777776555555433
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.09 E-value=2.9 Score=35.88 Aligned_cols=141 Identities=13% Similarity=0.067 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhhhhccccch--hhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHH------HHHHHh
Q 016986 54 LVATLSSFLFGYHLGVVNEP--LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR------AFQLCA 125 (379)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~------~l~~~~ 125 (379)
+-.+..++..++....+... .|. .+.+..+.+. ++=|....|.+|..+. +=+-++=+-+ ++-.-.
T Consensus 254 vPL~~VY~~EY~INQGl~ell~F~c-~~g~sls~~s-qYRwyqvlYQlGVFiS-----RSS~~~~~~p~l~~LailQ~vN 326 (409)
T KOG3880|consen 254 VPLALVYFAEYFINQGLAELLLFPC-SHGFSLSKDS-QYRWYQVLYQLGVFIS-----RSSINLFTMPYLWLLAILQFVN 326 (409)
T ss_pred HHHHHHHHHHHHHhhhhHhhEEecc-ccCCccchhh-cchhhheeeeeeEEEE-----eccceEEechHHHHHHHHHHHH
Confidence 34445555554433322222 122 3444444322 2357788887763322 2222222211 112223
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhccccc
Q 016986 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (379)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (379)
.++.+...+..+.++++...+.-+..|+-.|..+.-..--+.+-.++++|-.+++....+-.+|..++.+++-.+-
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 3444555567788999998888999999888888888777777778899999999999999999988888776553
No 288
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=86.52 E-value=13 Score=28.58 Aligned_cols=48 Identities=13% Similarity=0.063 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 325 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
.-..+......++.++.+.+.+++|.|+.++++.+...+-.......+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~ 88 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN 88 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 345556666778888899999999999999999888776655544433
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.48 E-value=8.8 Score=35.51 Aligned_cols=46 Identities=15% Similarity=0.228 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 016986 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL 190 (379)
Q Consensus 145 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 190 (379)
++.-++..+.....+....++-+.+.+|..=|..|.+.+...++|.
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 3446777777777788888999999999999999999998887764
No 290
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=86.43 E-value=1.8 Score=41.92 Aligned_cols=69 Identities=9% Similarity=0.080 Sum_probs=46.5
Q ss_pred hhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHh-hCchHHHHHHHHHHHHHHHHHHH
Q 016986 302 LSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
++....+..|+...++.....+......+....-+..+++|++.|+ +|+++.+.++.++..++..++.+
T Consensus 4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3444455566655444443334445555555556777888999997 69999999999988888877765
No 291
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=82.34 E-value=25 Score=28.50 Aligned_cols=38 Identities=13% Similarity=0.044 Sum_probs=21.0
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 168 EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 168 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
|....|++.+.-........++..+|..+++.+.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44434444334444455555666667777776666555
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.25 E-value=12 Score=26.26 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHH
Q 016986 331 GIANLLGSVVAMVLMDKL-GRKALLQWSFFSMVICSSISLI 370 (379)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~ 370 (379)
.+.+++-....||+.||+ |.+++-++.+.+.+.+..++.+
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 344445555677888886 5566655555555555544443
No 293
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.28 E-value=11 Score=31.64 Aligned_cols=99 Identities=11% Similarity=0.104 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcc-chhHHHHH----HHhHHHHHHHHHH-hcc--c--chHHHHHHHHHHHhhhchhhHH
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQ----LCALPMIIGASIS-ATT--R--NLIGMLLGRFVVGTGMGLGPTV 161 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~-~Grr~~l~----~~~~~~~~~~~~~-~~~--~--~~~~l~~~r~l~G~~~~~~~~~ 161 (379)
...-++..|..+|.+..|++... +-||+.+. .+.++..+..+.. ... + ++..+++.-++.|++.=+.+++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 44555666667777777877774 44555443 2233333333332 111 1 3566777778888765444444
Q ss_pred HHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 016986 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (379)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 191 (379)
.. .+.+-++..++.+..-.++..+++|.+
T Consensus 225 iL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 225 IL-NLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred Hh-cChhhhcCCCcceehhHHHHHHHHHHH
Confidence 43 344444444444444455556666544
No 294
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=78.26 E-value=51 Score=31.24 Aligned_cols=24 Identities=13% Similarity=0.340 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCc
Q 016986 327 NVFVGIANLLGSVVAMVLMDKLGR 350 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~g~l~d~~g~ 350 (379)
...+.+.+.++..+++++...++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCC
Confidence 334444555555555555555543
No 295
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=77.99 E-value=23 Score=31.31 Aligned_cols=109 Identities=14% Similarity=0.043 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhH--HHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHh
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 168 (379)
|..-++..+..+++.+..|.+.-++.|. ..+.++.+..+...++++.+++.|..+++.++.+.-.....+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 6667777788889999999998888775 44444555666666778888999998888888877777777888888888
Q ss_pred hcCCCcchhHHHHHHHHHHHHHHHHHhhcccccc
Q 016986 169 VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (379)
Q Consensus 169 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (379)
....+.-|...|+.... +.++=.++.....+
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 88877777777765543 33344444444444
No 296
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=76.98 E-value=64 Score=30.08 Aligned_cols=70 Identities=13% Similarity=0.081 Sum_probs=52.3
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHH
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~ 218 (379)
-++.|+........--..+.|.+| +++|+..+|-++...++..++..++++.+.+..| |...-.+.-+..
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G-w~~~a~i~Pii~ 343 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG-WLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHH
Confidence 455666677777777788888887 4678888998888888877777777788888888 887766543333
No 297
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=76.80 E-value=9 Score=32.41 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Q 016986 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVIC 364 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~ 364 (379)
.+.......+...++.+..|.+.||+|||+.+..+.....++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 82 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLG 82 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHH
Confidence 567777888888888899999999999997777666543333
No 298
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=72.84 E-value=84 Score=29.50 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=47.9
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcC-CCcchhHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~ 214 (379)
-+..|+........--..+.+.+| ++++...+|-++...++-+.+-.++++.+.+..| |+..-.+.
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~Alit 355 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHh
Confidence 355566666677777777788887 4566777777777776666666788888888888 88876664
No 299
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=72.10 E-value=7.8 Score=27.14 Aligned_cols=49 Identities=14% Similarity=-0.002 Sum_probs=40.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Q 016986 321 LSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
.+.|..++.++-..++.+++.++..|+..+.+.=.+|..++.++..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 4568999999999999999999999999887777777777777766554
No 300
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=71.20 E-value=27 Score=26.57 Aligned_cols=51 Identities=14% Similarity=0.123 Sum_probs=35.3
Q ss_pred cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 016986 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (379)
Q Consensus 139 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 192 (379)
+++..+++.-++.|+|. ..+.+.+++-.+.+++-|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 45555555555555543 3455667777888888999999999888887654
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.00 E-value=14 Score=25.95 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHhHHhhhccc-hhHHH
Q 016986 94 VSMCLGGAFIGSTLSGWIADGV-GRRRA 120 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d~~-Grr~~ 120 (379)
.+.=+++..+.....||+.||| |.++.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3444455556666778999985 44443
No 302
>PRK02237 hypothetical protein; Provisional
Probab=69.29 E-value=17 Score=25.55 Aligned_cols=48 Identities=10% Similarity=0.043 Sum_probs=40.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Q 016986 322 SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISL 369 (379)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~ 369 (379)
+.|..+..++-..++.+++.++..|+..+-+.=.+|..++.++..++.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 478999999999999999999999999877776777777777766553
No 303
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=65.98 E-value=18 Score=31.35 Aligned_cols=129 Identities=15% Similarity=0.032 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHhHHhhhccc--hhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHhhhchhhHHHHHHHHhh
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADGV--GRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~~--Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 169 (379)
.+.-+-.+-..+..+.+....||+ |.|.. +..++.+.+.++.+++++.++-+.+-.+..++.|.......++- ..
T Consensus 66 ~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~--~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~ 142 (409)
T KOG3880|consen 66 AVLLADILPSLAIKLTAPFFIHRFPFGFRIA--LVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SR 142 (409)
T ss_pred hhhhhhhhHHHHHHHhchhhhhhcccchHHH--HHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-cc
Confidence 333344445556666677778874 55654 44566777888899999999999999999998888776555443 33
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHhhccccccc--chhhHHHHHHHHHHHHHHHHHHhhc
Q 016986 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--AGWWRICFWVSIVPAAILCLAMVFC 228 (379)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (379)
+++. ..+-+..+.+.+.++|..--..+.+. .. -|...++...+-++.+..++++
T Consensus 143 Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~s-pk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 143 YPSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLS-PKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred CCCc----eeccccCCCCcchhhhhhHHHHHhhhcCCC-hhhHHHHHHHHHHHHHHHHHhe
Confidence 4332 23333333333334443332233331 11 3555555444444444444443
No 304
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=65.11 E-value=71 Score=30.70 Aligned_cols=80 Identities=11% Similarity=0.071 Sum_probs=54.9
Q ss_pred HHHHHHHhhchhHHHHhHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHHH
Q 016986 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMVICSSISLILEA 373 (379)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~~ 373 (379)
.+...+++.....+..|+...++..+..+...............+.+++++|-+ ||-+++.++.++..++..++.....
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~ 126 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAM 126 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455666777777777665455555555556667778999999975 7888999999888888776666544
Q ss_pred h
Q 016986 374 F 374 (379)
Q Consensus 374 ~ 374 (379)
.
T Consensus 127 ~ 127 (571)
T KOG1237|consen 127 I 127 (571)
T ss_pred h
Confidence 3
No 305
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=62.46 E-value=51 Score=23.06 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHhhCchHHHH
Q 016986 336 LGSVVAMVLMDKLGRKALLQ 355 (379)
Q Consensus 336 ~~~~~~g~l~d~~g~~~~~~ 355 (379)
+|.+++-|+-.+++......
T Consensus 58 ~G~~lG~WLD~~~~t~~~~t 77 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWT 77 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHH
Confidence 33333434444455444333
No 306
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=61.92 E-value=20 Score=35.13 Aligned_cols=82 Identities=20% Similarity=0.246 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHhhchhHHHHhHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHH
Q 016986 289 VVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSSGLANVFVGIANLLGSVVAMVLMDKLG-RKALLQWSFFSMVICSS 366 (379)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~i~~~ 366 (379)
.+++...+........+.....|++..+. ..+..++......+..++.+.-++-.+.-.+= |.++-.-+.+-+.+.+-
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 45556666666666666677777777664 47778889999999999888888888888764 45666655555555554
Q ss_pred HHHH
Q 016986 367 ISLI 370 (379)
Q Consensus 367 ~~~~ 370 (379)
++..
T Consensus 472 ~l~l 475 (735)
T KOG3626|consen 472 VLSL 475 (735)
T ss_pred HHHH
Confidence 4443
No 307
>COG1288 Predicted membrane protein [Function unknown]
Probab=60.07 E-value=1.4e+02 Score=27.35 Aligned_cols=73 Identities=10% Similarity=0.024 Sum_probs=41.1
Q ss_pred HHHhHHHHHHHHHHhcccchH--HHHHHHHHHHhh------hchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHH
Q 016986 122 QLCALPMIIGASISATTRNLI--GMLLGRFVVGTG------MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS 193 (379)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~--~l~~~r~l~G~~------~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 193 (379)
+.-.++....+++.++++... ..++...+.++. .+...-..++=++|...- .|..+...++.+.++-.++.
T Consensus 358 i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vgv-~RqvvV~Afq~g~G~~n~I~ 436 (481)
T COG1288 358 ILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVGV-PRQVVVLAFQLGDGFSNIIA 436 (481)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcCC-CHHHhhhhhhhcchhhheec
Confidence 444556666666666665543 233444555442 222222334456677653 47777777777777766666
Q ss_pred Hh
Q 016986 194 LL 195 (379)
Q Consensus 194 ~~ 195 (379)
|-
T Consensus 437 PT 438 (481)
T COG1288 437 PT 438 (481)
T ss_pred Cc
Confidence 64
No 308
>COG3619 Predicted membrane protein [Function unknown]
Probab=56.12 E-value=1.1e+02 Score=25.12 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=54.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhccchh-HH-H-HHHHhHHHHHHHHHHhcc----cchHHHHHHHHHHH-------
Q 016986 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RR-A-FQLCALPMIIGASISATT----RNLIGMLLGRFVVG------- 152 (379)
Q Consensus 87 ~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Gr-r~-~-l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G------- 152 (379)
+...........+...++......+..|..| .. . .....++.....+..++. ++....+..-+..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3333566666666666776665555555554 12 2 222333333333334432 34444444444444
Q ss_pred ----hhhchhhHH-----HHHHHHhhcCCC-cchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 153 ----TGMGLGPTV-----AALYVTEVSPPF-VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 153 ----~~~~~~~~~-----~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
...+..+.. ...-+.+++..| +.-..-...+....++.++|.+.++.+....+
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222211 122344444432 12223334445556666667777666666554
No 309
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=55.72 E-value=46 Score=20.45 Aligned_cols=43 Identities=7% Similarity=0.056 Sum_probs=24.1
Q ss_pred HHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 188 LGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 188 ~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
+|.+++.+.+.......+ ......++.+.+++..++.-..|++
T Consensus 13 l~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 444555544444444444 5666666666666666655555554
No 310
>COG4769 Predicted membrane protein [Function unknown]
Probab=55.68 E-value=21 Score=27.29 Aligned_cols=50 Identities=26% Similarity=0.125 Sum_probs=35.7
Q ss_pred HHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHHHh
Q 016986 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (379)
Q Consensus 98 ~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 153 (379)
....++.+...-++..++|+|.+-.+|.. ...++.+|..++++.+++.+-
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 34445666666778889998886444433 234678999999999999875
No 311
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=55.55 E-value=53 Score=22.95 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhhcccccccchh---hHHHHHHHHHHH
Q 016986 183 QIATCLGLMGSLLIGIPVKEIAGW---WRICFWVSIVPA 218 (379)
Q Consensus 183 ~~~~~~g~~~~~~~~~~l~~~~~~---wr~~f~~~~~~~ 218 (379)
+....+..++|..+|-++-...+. |-..|++.++..
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 334444456666666677665542 444554444443
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=55.30 E-value=1.6e+02 Score=26.40 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=52.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHH----HhHHHHHHHHH-Hhcc----cchHHHHHHHHHHHhhhc
Q 016986 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL----CALPMIIGASI-SATT----RNLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 86 ~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~----~~~~~~~~~~~-~~~~----~~~~~l~~~r~l~G~~~~ 156 (379)
.-.+.+++.+.|..+..+|+...-++.|.--.-+.+.. |++.-.-..++ ..|+ ++-+.+++.-++.|.-.|
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG 120 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVG 120 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHh
Confidence 33444899999999999999988888775433322222 22211111111 1233 455667778888998899
Q ss_pred hhhHHHHHHHHh
Q 016986 157 LGPTVAALYVTE 168 (379)
Q Consensus 157 ~~~~~~~~~i~~ 168 (379)
.-.|..+.++..
T Consensus 121 ~EiPL~mrml~~ 132 (508)
T COG4262 121 AEIPLLMRMLQR 132 (508)
T ss_pred cchHHHHHHHHH
Confidence 999998888776
No 313
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=52.68 E-value=58 Score=25.78 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 330 VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLILEAFL 375 (379)
Q Consensus 330 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 375 (379)
+-++.+++..+.|++.||..+|+-...-...+.++...+......|
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~~~~~~~~~~~~l~G~~~iy~~G~~~ 136 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRKRNGFILLFLALLAGLIVIYLLGILW 136 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHH
Confidence 4456778888999999998753333333334444444444444433
No 314
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=52.60 E-value=1.1e+02 Score=25.79 Aligned_cols=25 Identities=4% Similarity=0.060 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCC
Q 016986 207 WRICFWVSIVPAAILCLAMVFCAES 231 (379)
Q Consensus 207 wr~~f~~~~~~~~~~~~~~~~~~e~ 231 (379)
..+.-+++.++.++...++.+++.+
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecCC
Confidence 4455555555565665555555443
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=52.39 E-value=1.7e+02 Score=31.09 Aligned_cols=17 Identities=12% Similarity=0.145 Sum_probs=8.1
Q ss_pred HHHHHHhhcccccccch
Q 016986 189 GLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 189 g~~~~~~~~~~l~~~~~ 205 (379)
|.++|.+++..+....|
T Consensus 143 GGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 44455555444444444
No 316
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=48.01 E-value=78 Score=24.08 Aligned_cols=26 Identities=23% Similarity=0.300 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhHHhhhccchhHH
Q 016986 94 VSMCLGGAFIGSTLSGWIADGVGRRR 119 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d~~Grr~ 119 (379)
+.-|.+++.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45677888899999999999988763
No 317
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=47.02 E-value=2.1e+02 Score=25.42 Aligned_cols=55 Identities=11% Similarity=0.075 Sum_probs=37.2
Q ss_pred HHHHhHHhhhccchhHHHHHHHhHHHH---HHHHHHhcccchHHHHHHHHHHHhhhch
Q 016986 103 IGSTLSGWIADGVGRRRAFQLCALPMI---IGASISATTRNLIGMLLGRFVVGTGMGL 157 (379)
Q Consensus 103 i~~~~~g~l~d~~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 157 (379)
+-.++.+++.+.+|--+.+..+.++.. --.+....++|......+-.+.|.-.|.
T Consensus 61 ~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~ 118 (354)
T PF04346_consen 61 FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGA 118 (354)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcc
Confidence 445566788888998888888766632 3345566778877777776666654444
No 318
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=45.44 E-value=3.2e+02 Score=27.19 Aligned_cols=51 Identities=10% Similarity=-0.020 Sum_probs=32.9
Q ss_pred HhHHhhhcc----chhHHHHHHHhHHHHHHHHHHhcccchHHH-HHHHHHHHhhhc
Q 016986 106 TLSGWIADG----VGRRRAFQLCALPMIIGASISATTRNLIGM-LLGRFVVGTGMG 156 (379)
Q Consensus 106 ~~~g~l~d~----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~r~l~G~~~~ 156 (379)
.+++-+.|. -||.+-++++.++++++++...+...+.++ ...-++.+++.+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 344555664 367788889999999988888776555544 344445555443
No 319
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=43.53 E-value=73 Score=22.50 Aligned_cols=47 Identities=30% Similarity=0.359 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~ 137 (379)
|-+.++|.-.+.+.++.+++..|+.-+.+.=.+|..+..++..+.-+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 66778888888999999999999998877777777766666554433
No 320
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=43.47 E-value=3.5e+02 Score=26.98 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=31.7
Q ss_pred hHHhhhcc----chhHHHHHHHhHHHHHHHHHHhcccchH-HHHHHHHHHHhhhc
Q 016986 107 LSGWIADG----VGRRRAFQLCALPMIIGASISATTRNLI-GMLLGRFVVGTGMG 156 (379)
Q Consensus 107 ~~g~l~d~----~Grr~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~r~l~G~~~~ 156 (379)
+++-++|. -||.+-++++.++++++++...+...++ .+...-++.+++.+
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 34556664 4677888888888888888877665544 44444445554443
No 321
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=42.93 E-value=2.8e+02 Score=25.74 Aligned_cols=125 Identities=19% Similarity=0.189 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHH
Q 016986 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (379)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~ 130 (379)
.......+-.++..+...+..|.+ +..++|++.++. ..+.++-.+...++.++--.-..+.|-|-....+.....+
T Consensus 16 ~~~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~--~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi 91 (451)
T COG2233 16 GKLLLLGLQHLLAMFGATVLVPLL--VGLALGLSAEDT--AYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFV 91 (451)
T ss_pred HHHHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHHH--HHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHH
Confidence 344456666666666665544443 456788887777 6788888888888888877644456656555566555555
Q ss_pred HHHHHhcc---cchHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcchhHH
Q 016986 131 GASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYG 179 (379)
Q Consensus 131 ~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 179 (379)
+.++.... .....++.+-+..|+..-...+.....+...+||---|...
T Consensus 92 ~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 92 APMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEe
Confidence 55544433 23666666666666655444433322788888887666544
No 322
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=41.18 E-value=2.4e+02 Score=24.45 Aligned_cols=35 Identities=11% Similarity=-0.058 Sum_probs=18.8
Q ss_pred chHHHHHHHHHHHhhhchhhHHH-HHHHHhhcCCCc
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVA-ALYVTEVSPPFV 174 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~~ 174 (379)
+...-.+--.+++++.|...-+. .-++.|....++
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34444555667777766654443 335555555443
No 323
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=40.86 E-value=2.4e+02 Score=24.42 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhcc---chhHHHHHHH
Q 016986 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG---VGRRRAFQLC 124 (379)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~---~Grr~~l~~~ 124 (379)
++....+.+..++++.-...+..+-.+..+++.+++..+.. ++..+.. ...++.+-.++ ||.||.=+++
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~--al~lal~------A~~~a~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDAL--ALLLALI------AIKLARRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHH--HHHHHHH------HHHHhcCCCCCCCCccHhHHHHHH
Confidence 33444444555555555555555556667777777654444 3333222 22333344443 8888877777
Q ss_pred hHHHHHHHHHHh
Q 016986 125 ALPMIIGASISA 136 (379)
Q Consensus 125 ~~~~~~~~~~~~ 136 (379)
.+..++..+..+
T Consensus 94 a~~nav~Li~~s 105 (296)
T COG1230 94 AFLNALLLIVVS 105 (296)
T ss_pred HHHHHHHHHHHH
Confidence 666666555444
No 324
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=40.54 E-value=1.5e+02 Score=22.50 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHhhCch
Q 016986 332 IANLLGSVVAMVLMDKLGRK 351 (379)
Q Consensus 332 ~~~~~~~~~~g~l~d~~g~~ 351 (379)
++..++..+.|++.+|..++
T Consensus 64 ~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 64 LGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred HHHHHHHHHHHHHHHhcccc
Confidence 44555666667777776554
No 325
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=40.13 E-value=2.2e+02 Score=26.62 Aligned_cols=30 Identities=13% Similarity=0.134 Sum_probs=20.5
Q ss_pred hhHHHHHHHhHHHHHHHHHHhcccchHHHH
Q 016986 116 GRRRAFQLCALPMIIGASISATTRNLIGML 145 (379)
Q Consensus 116 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 145 (379)
|.|+.....++.+.++.+.-++.+++....
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~f 368 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFF 368 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 445555555666778888888888876554
No 326
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=39.28 E-value=1.4e+02 Score=21.24 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=14.2
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcC
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~ 171 (379)
|.+.+.|.-+.++...++..|...
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHH
Confidence 344455555556666677777664
No 327
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=39.26 E-value=23 Score=28.99 Aligned_cols=49 Identities=18% Similarity=0.137 Sum_probs=34.0
Q ss_pred HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhh
Q 016986 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (379)
Q Consensus 147 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (379)
.-.-.|+|.|.....+..-+.+.+| +......++...++-+....|-.+
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455688888888888889999997 445666666666666555555433
No 328
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.10 E-value=3.1e+02 Score=25.34 Aligned_cols=23 Identities=13% Similarity=-0.058 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 016986 323 SGLANVFVGIANLLGSVVAMVLM 345 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~ 345 (379)
-|.+.....+..++.+.+.|+.+
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~ 347 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVS 347 (593)
T ss_pred chHHHHHHHHHHHhccccccccc
Confidence 34444444444555555555443
No 329
>PTZ00101 rhomboid-1 protease; Provisional
Probab=37.20 E-value=2.7e+02 Score=23.91 Aligned_cols=39 Identities=18% Similarity=0.062 Sum_probs=24.7
Q ss_pred HHHHHHHHHhHHhhhcc-chhHHHHHHHhHHHHHHHHHHh
Q 016986 98 LGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISA 136 (379)
Q Consensus 98 ~~~~~i~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~ 136 (379)
.+.........|...+| +|+++.+++=.+....+.++.+
T Consensus 118 Ll~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~ 157 (278)
T PTZ00101 118 TFFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSS 157 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 34555666777776665 8998877655555555555443
No 330
>PRK02237 hypothetical protein; Provisional
Probab=37.10 E-value=1.3e+02 Score=21.37 Aligned_cols=47 Identities=28% Similarity=0.287 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhc
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~ 137 (379)
|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..++..+.-+
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 67788888888999999999999988776666666666665544433
No 331
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=37.06 E-value=1e+02 Score=24.50 Aligned_cols=24 Identities=25% Similarity=0.339 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhHHhhhccchh
Q 016986 94 VSMCLGGAFIGSTLSGWIADGVGR 117 (379)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~d~~Gr 117 (379)
+.-|.+++.++..+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456778889999999999999885
No 332
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=36.34 E-value=50 Score=23.11 Aligned_cols=46 Identities=9% Similarity=-0.031 Sum_probs=36.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q 016986 322 SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSI 367 (379)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~ 367 (379)
..|..+..++-..++.++..++..|+..+-+.=.+|..++.++..+
T Consensus 56 a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~v 101 (109)
T COG1742 56 AFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAV 101 (109)
T ss_pred hhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceee
Confidence 4688899999999999999999999987766666666666665443
No 333
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=36.22 E-value=2.7e+02 Score=25.01 Aligned_cols=15 Identities=0% Similarity=0.018 Sum_probs=11.3
Q ss_pred hccchhHHHHHHHhH
Q 016986 112 ADGVGRRRAFQLCAL 126 (379)
Q Consensus 112 ~d~~Grr~~l~~~~~ 126 (379)
.||+.-.|++.+..-
T Consensus 208 ~e~ft~sKllav~~s 222 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVS 222 (416)
T ss_pred cchhhHHHHHHHHHh
Confidence 899999997655443
No 334
>PRK03612 spermidine synthase; Provisional
Probab=35.86 E-value=3.9e+02 Score=25.43 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=21.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHH-HHhhCchH
Q 016986 320 GLSSGLANVFVGIANLLGSVVAMVL-MDKLGRKA 352 (379)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~g~l-~d~~g~~~ 352 (379)
+...|.++....+|+++|.++.+++ .+++|-..
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~ 177 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIR 177 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHH
Confidence 3445677777777777777776664 44666543
No 335
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=34.14 E-value=90 Score=20.54 Aligned_cols=11 Identities=36% Similarity=0.531 Sum_probs=4.4
Q ss_pred HHHHhHHhhhc
Q 016986 103 IGSTLSGWIAD 113 (379)
Q Consensus 103 i~~~~~g~l~d 113 (379)
+.+++.|++.+
T Consensus 22 iisfi~Gy~~q 32 (76)
T PF06645_consen 22 IISFIVGYITQ 32 (76)
T ss_pred HHHHHHHHHHH
Confidence 33334444433
No 336
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=32.98 E-value=1.4e+02 Score=20.27 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=25.5
Q ss_pred HHHHHhHHhhhccchh-------HHHHHHHhHHHHHHHHHHhcccc
Q 016986 102 FIGSTLSGWIADGVGR-------RRAFQLCALPMIIGASISATTRN 140 (379)
Q Consensus 102 ~i~~~~~g~l~d~~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 140 (379)
..+.+.++++.+|.-+ ++.+..+.++...+.++++..++
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3555666666666554 67777777777777777666554
No 337
>PRK10692 hypothetical protein; Provisional
Probab=32.28 E-value=1.4e+02 Score=20.18 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=10.5
Q ss_pred hHHHHHHHhHHHHHHHH
Q 016986 117 RRRAFQLCALPMIIGAS 133 (379)
Q Consensus 117 rr~~l~~~~~~~~~~~~ 133 (379)
||...++|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 56666666666666544
No 338
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=31.47 E-value=5.7e+02 Score=25.93 Aligned_cols=37 Identities=8% Similarity=-0.047 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH
Q 016986 182 IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (379)
Q Consensus 182 ~~~~~~~g~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~ 219 (379)
...+..++.++..+++.++....+ |...++++++++.
T Consensus 106 l~~~M~lT~livAL~a~~Li~GL~-~~~ALLLGAILAP 142 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPGLN-FPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHHhhhcC
Confidence 333444444444444444433344 7777776666553
No 339
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=30.47 E-value=1.2e+02 Score=20.21 Aligned_cols=20 Identities=15% Similarity=0.174 Sum_probs=13.0
Q ss_pred HHHHHHHhHHhhhccchhHH
Q 016986 100 GAFIGSTLSGWIADGVGRRR 119 (379)
Q Consensus 100 ~~~i~~~~~g~l~d~~Grr~ 119 (379)
.+.+-.....+..||..||-
T Consensus 58 ~fviLi~~Ya~~mnrlD~~~ 77 (81)
T PF13937_consen 58 VFVILIFVYAWRMNRLDRKY 77 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455566677788877763
No 340
>PRK10263 DNA translocase FtsK; Provisional
Probab=29.98 E-value=4.7e+02 Score=28.15 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Q 016986 331 GIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSI 367 (379)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~ 367 (379)
..|+++|.+++..+...+|.--..++..+++++++.+
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLiL 177 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTL 177 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4588888888888888887655555444444444433
No 341
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=29.80 E-value=2.1e+02 Score=20.36 Aligned_cols=50 Identities=12% Similarity=-0.025 Sum_probs=27.4
Q ss_pred hHHhhhccchhHHHHHHHhHHHHHHHHHHhcc-cchHHHHHHHHHHHhhhc
Q 016986 107 LSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMG 156 (379)
Q Consensus 107 ~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~ 156 (379)
..=+.+|.+.|+...+...+...++..+.+.+ ++.+.=++--.-.|+|..
T Consensus 19 ~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v 69 (106)
T COG2076 19 TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIV 69 (106)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Confidence 34467777777777776666666665555544 333333333344444443
No 342
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=29.40 E-value=97 Score=23.56 Aligned_cols=51 Identities=8% Similarity=0.013 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccchHHHHHHHHHH
Q 016986 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (379)
Q Consensus 95 s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 151 (379)
-.+.++..+.+...-.+..|..||+.=..+. ++..+.++|..|++++.++.
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 4555666677777777777777665433332 34456788888888877654
No 343
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=28.95 E-value=1.6e+02 Score=22.59 Aligned_cols=28 Identities=18% Similarity=0.096 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccchhH
Q 016986 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (379)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~d~~Grr 118 (379)
.++.+...++..+..+-.|.|+-.+...
T Consensus 99 ~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 99 VLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred HHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 5778888888888888889998887654
No 344
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=28.90 E-value=1e+02 Score=16.44 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 016986 329 FVGIANLLGSVVAMVLMDK 347 (379)
Q Consensus 329 ~~~~~~~~~~~~~g~l~d~ 347 (379)
...+.+++.+++.+|+-+|
T Consensus 16 AP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 4556666777777776554
No 345
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=27.81 E-value=2.4e+02 Score=20.49 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=14.0
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcC
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~ 171 (379)
|.+.+.|.-+.++...++..|...
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHHH
Confidence 444455555555666667777664
No 346
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=27.29 E-value=87 Score=28.00 Aligned_cols=39 Identities=8% Similarity=0.225 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchh
Q 016986 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL 88 (379)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 88 (379)
|..+..+....++..+....+.-.+....++++++.+-.
T Consensus 289 ~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Fi 327 (441)
T KOG1397|consen 289 WSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFI 327 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh
Confidence 333333334444444433333445566777888765544
No 347
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.77 E-value=1.6e+02 Score=27.89 Aligned_cols=30 Identities=17% Similarity=0.045 Sum_probs=16.2
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016986 319 AGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (379)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (379)
++.+-|.++....+..+++.+++|+.+-|.
T Consensus 357 SPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 357 SPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 444455455555555555566666655553
No 348
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=26.72 E-value=3.4e+02 Score=21.82 Aligned_cols=31 Identities=13% Similarity=-0.052 Sum_probs=23.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhcccccc
Q 016986 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (379)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (379)
.++.+++.++.-.+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4566788888778888888888888776644
No 349
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=26.59 E-value=9.2e+02 Score=26.78 Aligned_cols=12 Identities=17% Similarity=0.218 Sum_probs=6.9
Q ss_pred hHHHHHHHHHHH
Q 016986 207 WRICFWVSIVPA 218 (379)
Q Consensus 207 wr~~f~~~~~~~ 218 (379)
|+....+.++..
T Consensus 197 w~Lalv~l~~~p 208 (1466)
T PTZ00265 197 ARLTLCITCVFP 208 (1466)
T ss_pred HHHHHHHHHHHH
Confidence 777765544433
No 350
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=25.74 E-value=1.8e+02 Score=19.49 Aligned_cols=17 Identities=35% Similarity=0.475 Sum_probs=10.1
Q ss_pred hHHHHHHHhHHHHHHHH
Q 016986 117 RRRAFQLCALPMIIGAS 133 (379)
Q Consensus 117 rr~~l~~~~~~~~~~~~ 133 (379)
||...++|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMV 19 (89)
T ss_pred chhhHHHhhHHHHHhHH
Confidence 55666666666666544
No 351
>PF08570 DUF1761: Protein of unknown function (DUF1761); InterPro: IPR013879 This entry shows conserved fungal proteins with unknown function.
Probab=25.59 E-value=2.7e+02 Score=20.29 Aligned_cols=16 Identities=6% Similarity=-0.051 Sum_probs=9.9
Q ss_pred hhhhhhhhccCCcchh
Q 016986 73 PLESISLDLGFNGNTL 88 (379)
Q Consensus 73 ~~~~i~~~~~~~~~~~ 88 (379)
+-+...++.|.++++.
T Consensus 23 Fg~~W~~~~g~~~~~~ 38 (126)
T PF08570_consen 23 FGKAWMRAMGITPEDA 38 (126)
T ss_pred HHHHHHHHcCCCcccc
Confidence 5566667777765553
No 352
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=24.86 E-value=1.9e+02 Score=18.24 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=18.6
Q ss_pred chHHHHHHHHHHHhhhchhhHHHHHHHHhhcCCCcch
Q 016986 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRG 176 (379)
Q Consensus 140 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 176 (379)
++..+......-++..+... ....+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l-~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITL-FLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccCC
Confidence 33334443444444444444 3457888888764443
No 353
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=24.85 E-value=3.2e+02 Score=20.98 Aligned_cols=41 Identities=5% Similarity=0.067 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHH----HHHhhCchHHHHHHHHHHHHHHHHHHHHH
Q 016986 332 IANLLGSVVAMV----LMDKLGRKALLQWSFFSMVICSSISLILE 372 (379)
Q Consensus 332 ~~~~~~~~~~g~----l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 372 (379)
+..+++.++... -.+|..++.....-...+.++.+++..++
T Consensus 84 vvlvi~~liwa~~~~a~~krmr~~hp~~~l~gvllv~yfli~v~~ 128 (188)
T KOG4050|consen 84 VVLVIGTLIWAASADANIKRMRTDHPLVTLAGVLLVGYFLISVFG 128 (188)
T ss_pred HHHHHHHHHHHHhccHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 334444444443 44455544444333334444444444443
No 354
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=24.81 E-value=2.4e+02 Score=25.21 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHHHHHhcccc
Q 016986 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN 140 (379)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~ 140 (379)
|..-...+|..++..+.+++-|++|....+.++.+.+.++.+......+
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 4555556666677777788999999999999988888888777666543
No 355
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=24.54 E-value=2.7e+02 Score=21.02 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=19.9
Q ss_pred HHHHhhcCCCcchhHHHHHHHHHHHH
Q 016986 164 LYVTEVSPPFVRGTYGAFIQIATCLG 189 (379)
Q Consensus 164 ~~i~~~~~~~~r~~~~~~~~~~~~~g 189 (379)
.-+.|++|+..|..+.+.+.......
T Consensus 56 ~ALkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 56 YALKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 44789999999998888777665543
No 356
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=24.18 E-value=6.8e+02 Score=24.43 Aligned_cols=64 Identities=14% Similarity=0.130 Sum_probs=45.0
Q ss_pred hhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhccchhHHHHHHHhHHHHHHH
Q 016986 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (379)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 132 (379)
...+-+..++..+..-+|++++-. | .++...|..+|-+++-.-.-|.|.-++-..+++..-+.+
T Consensus 461 ~~A~Eiv~vl~~lG~I~~ls~siL--G--LTv~AWgNSiGDLIAniavak~G~p~MAmaac~GGplfn 524 (605)
T KOG2399|consen 461 LIANELVAVLTMLGVIFGLSPSIL--G--LTVLAWGNSIGDLIANIAVAKQGYPRMAMAACIGGPLFN 524 (605)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHH--H--HHHHHHhccHHHHHHHHHHHHcCcHHHHHHHHhhhHHHH
Confidence 333444566777888888876543 4 788888999999999888888888766555555444433
No 357
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=23.90 E-value=4.8e+02 Score=23.99 Aligned_cols=59 Identities=12% Similarity=0.031 Sum_probs=43.8
Q ss_pred HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcccccccch
Q 016986 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (379)
Q Consensus 147 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (379)
...+.+...-..+...++..+...+++-.|..|.+.+.-.++|.--...+..++.+..+
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 35666666666677788999999999999999999999888876555555555555444
No 358
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=23.22 E-value=2.5e+02 Score=19.12 Aligned_cols=34 Identities=15% Similarity=0.432 Sum_probs=21.0
Q ss_pred ccchHHHHHHHHHHHhhhchhhHHHHHHHHhhcC
Q 016986 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (379)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 171 (379)
-+--+=++++|.+.|-+.+..-........|..|
T Consensus 28 Epit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 28 EPITLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred CCCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 3445567888988887776665555544444443
No 359
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=22.56 E-value=6.6e+02 Score=23.75 Aligned_cols=74 Identities=19% Similarity=0.117 Sum_probs=48.1
Q ss_pred HHHHHHhhhchhhHHHHHHHHhhcCC-CcchhHHHHHHHHHHHH-HHHHHhhcccccccchhhHHHHHHHHHHHHHH
Q 016986 147 GRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLG-LMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (379)
Q Consensus 147 ~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~wr~~f~~~~~~~~~~ 221 (379)
.-...|++.......--+-+.+.+|. +++...+|-++...++- .++...+++-+....| |-+.-.+.-+..++.
T Consensus 290 ~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~lit 365 (509)
T COG3202 290 LVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHH
Confidence 33455666666677777778888873 55777777777666665 5556677788888777 776655543433333
No 360
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.53 E-value=47 Score=24.53 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q 016986 208 RICFWVSIVPAAIL 221 (379)
Q Consensus 208 r~~f~~~~~~~~~~ 221 (379)
||++++..++.+++
T Consensus 1 RW~l~~iii~~i~l 14 (130)
T PF12273_consen 1 RWVLFAIIIVAILL 14 (130)
T ss_pred CeeeHHHHHHHHHH
Confidence 45555443443333
No 361
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=22.17 E-value=48 Score=28.04 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=0.0
Q ss_pred cccccCCCccchhHHHHHHHHHHHHHHhhhhccccchhhhhhhhccCCcchhHHHHHHHHHHHHHHHHHHhHHhhhc---
Q 016986 37 TEVENTNPSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD--- 113 (379)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d--- 113 (379)
+.+++.+..........+....+.+++....+.--.++-...++.+.++++. +.+.-+-.+..++..++.|..+|
T Consensus 3 ~~~eeDPstkPigr~svf~yGvGHmlNDitAScWFTYlllfltqiglsp~~~--AmlML~GQVtda~st~ftGi~~d~nl 80 (412)
T KOG4830|consen 3 PVREEDPSTKPIGRTSVFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSR--AMLMLIGQVTDAISTPFTGIFSDSNL 80 (412)
T ss_pred CcccCCCCCCcccceeeeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcchh--HHHHHhhHHHHHHhcccccccccccc
Q ss_pred ------cchhHH
Q 016986 114 ------GVGRRR 119 (379)
Q Consensus 114 ------~~Grr~ 119 (379)
|+|||+
T Consensus 81 l~~~idr~G~~~ 92 (412)
T KOG4830|consen 81 LPACIDRIGRRM 92 (412)
T ss_pred cHHHhhhhccee
No 362
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.79 E-value=8.6e+02 Score=26.42 Aligned_cols=85 Identities=14% Similarity=0.125 Sum_probs=44.6
Q ss_pred HHHhHHHHHHHHHHhcccchHHHHH---HHHHHHhhhchhhHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHhhcc
Q 016986 122 QLCALPMIIGASISATTRNLIGMLL---GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (379)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~l~~---~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 198 (379)
+...+..++..++.++.++..-+.. .-++.-... ......++-..+. +...+...+++.++-.+.+|
T Consensus 549 i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~----s~lFr~ia~l~~t------~~~An~~g~~~~L~i~m~~G 618 (1391)
T KOG0065|consen 549 IESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCM----SGLFRFIASLSRT------LSIANLIGGILLLVLFMYGG 618 (1391)
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHH----HHHHHHHHHhcch------HHHHhhHhHHHHHHHHHHcc
Confidence 3344455555666666666443222 222222211 1222333443332 34445556667777777788
Q ss_pred ccccc---chhhHHHHHHHHH
Q 016986 199 PVKEI---AGWWRICFWVSIV 216 (379)
Q Consensus 199 ~l~~~---~~~wr~~f~~~~~ 216 (379)
++... ..||||.+++.=+
T Consensus 619 f~Ip~~~m~~W~~Wi~yinPl 639 (1391)
T KOG0065|consen 619 FVIPKKDMPPWFRWIAYINPL 639 (1391)
T ss_pred eeeeccccchHHHHHHHHCHH
Confidence 77654 4579999998533
No 363
>PF14715 FixP_N: N-terminal domain of cytochrome oxidase-cbb3, FixP
Probab=21.18 E-value=1.7e+02 Score=17.49 Aligned_cols=21 Identities=29% Similarity=0.504 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHH
Q 016986 205 GWWRICFWVSIVPAAILCLAM 225 (379)
Q Consensus 205 ~~wr~~f~~~~~~~~~~~~~~ 225 (379)
.+|.+.|+...+.++...+.+
T Consensus 22 ~ww~~~f~~tivfa~~Y~~~y 42 (51)
T PF14715_consen 22 RWWLWLFYGTIVFAVGYLVLY 42 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 358888888777776665553
No 364
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=21.09 E-value=3.9e+02 Score=20.56 Aligned_cols=17 Identities=24% Similarity=0.141 Sum_probs=9.1
Q ss_pred HHHHHHHHHhHHhhhcc
Q 016986 98 LGGAFIGSTLSGWIADG 114 (379)
Q Consensus 98 ~~~~~i~~~~~g~l~d~ 114 (379)
.....++.++|..-+|.
T Consensus 83 vvvlvi~~liwa~~~~a 99 (188)
T KOG4050|consen 83 VVVLVIGTLIWAASADA 99 (188)
T ss_pred HHHHHHHHHHHHHhccH
Confidence 34444555666665554
No 365
>KOG3500 consensus Vacuolar H+-ATPase V0 sector, subunit M9.7 (M9.2) [Energy production and conversion]
Probab=20.62 E-value=2e+02 Score=19.11 Aligned_cols=42 Identities=7% Similarity=0.143 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Q 016986 330 VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMVICSSISLIL 371 (379)
Q Consensus 330 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 371 (379)
+.+...+.++.+.+...|...|.++....++.++++-++...
T Consensus 10 ftvfw~~v~~~~pi~~~kgP~~~li~~~lvlTAVCCwlfWli 51 (84)
T KOG3500|consen 10 FTVFWGIVGICGPICFPKGPNRGLIRCMLVLTAVCCWLFWLI 51 (84)
T ss_pred HHHHHHHHHHhcceeccCCCCcChhHHHHHHHHHHHHHHHHH
Confidence 344445555566667777777888877777777777665543
No 366
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=20.42 E-value=3.6e+02 Score=19.88 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=13.3
Q ss_pred HHHHHhhhchhhHHHHHHHHhhcC
Q 016986 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (379)
Q Consensus 148 r~l~G~~~~~~~~~~~~~i~~~~~ 171 (379)
|.+.+.|.-+.++...++..|...
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~ 92 (127)
T PRK14200 69 RQIIGLGFLGALTTFSTFSMDNVL 92 (127)
T ss_pred HHHHHHHHhccchhHHHHHHHHHH
Confidence 444444544455566666666654
No 367
>TIGR00827 EIIC-GAT PTS system, galactitol-specific IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The only characterized member of this family of PTS transporters is the E. coli galactitol transporter. Gat family PTS systems typically have 3 components: IIA, IIB and IIC. This family is specific for the IIC component of the PTS Gat family.
Probab=20.33 E-value=6.7e+02 Score=22.96 Aligned_cols=35 Identities=6% Similarity=0.198 Sum_probs=25.6
Q ss_pred HHHhhhhccccchhhhhhhhccCCcchhHHHHHHH
Q 016986 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVS 95 (379)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s 95 (379)
...++....++|....+.+.+|++-+....||-..
T Consensus 44 lvi~ll~~~l~Pa~q~mv~~~Gl~L~iiDvGW~~~ 78 (407)
T TIGR00827 44 LVIDLLVDSLGPAAKGMVERFGLDLHVIDVGWPAT 78 (407)
T ss_pred HHHHHHHhcchHHHHHHHHHhCCCCceeecCchHH
Confidence 34455666778888889999998877766677654
No 368
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=20.32 E-value=1.9e+02 Score=18.01 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHH----HHHHHHHhhcCCCh
Q 016986 207 WRICFWVSIVPA----AILCLAMVFCAESP 232 (379)
Q Consensus 207 wr~~f~~~~~~~----~~~~~~~~~~~e~p 232 (379)
+|..|.+..+.. ++.++.++++|++|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 688777655543 23344455677764
Done!