Query 016989
Match_columns 379
No_of_seqs 193 out of 2657
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 07:07:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3brk_X Glucose-1-phosphate ade 100.0 1.3E-45 4.5E-50 357.9 28.3 330 5-374 9-388 (420)
2 1yp2_A Glucose-1-phosphate ade 100.0 1.4E-42 4.8E-47 339.8 25.8 327 7-374 19-413 (451)
3 3st8_A Bifunctional protein GL 100.0 4E-41 1.4E-45 333.2 27.2 334 5-373 9-399 (501)
4 2ggo_A 401AA long hypothetical 100.0 4.4E-39 1.5E-43 310.3 22.1 305 9-374 1-328 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 4.9E-38 1.7E-42 309.0 26.0 226 8-272 11-251 (468)
6 4fce_A Bifunctional protein GL 100.0 1.2E-36 4.1E-41 298.4 23.6 312 7-374 7-352 (459)
7 2v0h_A Bifunctional protein GL 100.0 7.7E-36 2.6E-40 292.4 24.1 311 7-373 4-348 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 3.6E-35 1.2E-39 269.5 18.2 234 8-271 2-270 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 3.9E-34 1.3E-38 260.9 20.5 231 6-270 22-258 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 5.3E-33 1.8E-37 257.7 20.2 237 1-269 1-279 (302)
11 2ux8_A Glucose-1-phosphate uri 100.0 5E-32 1.7E-36 250.5 16.7 234 7-270 13-278 (297)
12 1fxo_A Glucose-1-phosphate thy 100.0 1.4E-31 4.9E-36 246.3 19.2 230 8-270 2-240 (293)
13 1lvw_A Glucose-1-phosphate thy 100.0 4E-31 1.4E-35 243.4 20.8 229 9-270 4-241 (295)
14 1mc3_A Glucose-1-phosphate thy 100.0 1.9E-31 6.4E-36 245.7 16.9 229 9-270 4-241 (296)
15 1tzf_A Glucose-1-phosphate cyt 100.0 9.8E-31 3.4E-35 237.0 19.3 224 8-271 2-250 (259)
16 2pa4_A UTP-glucose-1-phosphate 100.0 3.1E-31 1.1E-35 247.9 16.4 235 7-270 11-281 (323)
17 3pnn_A Conserved domain protei 100.0 8.5E-31 2.9E-35 242.6 17.1 236 7-273 4-293 (303)
18 4evw_A Nucleoside-diphosphate- 100.0 3E-30 1E-34 233.0 15.7 220 11-267 2-243 (255)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 1.3E-29 4.5E-34 235.3 15.8 243 5-268 1-281 (308)
20 3oam_A 3-deoxy-manno-octuloson 99.9 6.6E-27 2.2E-31 210.8 17.4 221 8-271 2-249 (252)
21 2x65_A Mannose-1-phosphate gua 99.9 5.7E-26 1.9E-30 212.7 13.7 230 9-265 2-270 (336)
22 1jyk_A LICC protein, CTP:phosp 99.9 4.8E-26 1.7E-30 205.4 11.7 219 7-269 24-250 (254)
23 3tqd_A 3-deoxy-manno-octuloson 99.9 5.6E-25 1.9E-29 197.8 17.6 221 7-268 8-255 (256)
24 2cu2_A Putative mannose-1-phos 99.9 1.3E-25 4.5E-30 210.3 12.0 232 8-265 2-265 (337)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 2.5E-24 8.6E-29 194.4 16.2 222 6-268 16-262 (264)
26 4fcu_A 3-deoxy-manno-octuloson 99.9 1.5E-22 5.1E-27 181.8 18.3 223 9-272 2-251 (253)
27 2y6p_A 3-deoxy-manno-octuloson 99.9 2.3E-22 7.8E-27 179.1 16.4 217 8-269 2-231 (234)
28 2xme_A CTP-inositol-1-phosphat 99.9 1.3E-22 4.4E-27 180.6 12.3 211 4-268 14-231 (232)
29 1vic_A 3-deoxy-manno-octuloson 99.9 1E-21 3.6E-26 177.9 18.5 223 8-270 2-252 (262)
30 1h7e_A 3-deoxy-manno-octuloson 99.9 1.1E-20 3.8E-25 169.3 19.9 217 8-271 2-239 (245)
31 1ezi_A CMP-N-acetylneuraminic 99.8 3.6E-20 1.2E-24 164.2 14.6 202 6-269 2-223 (228)
32 2icy_A Probable UTP-glucose-1- 99.8 1.3E-18 4.3E-23 167.9 21.4 180 7-196 78-309 (469)
33 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 1.6E-18 5.4E-23 154.2 14.7 215 9-269 3-233 (236)
34 2dpw_A Hypothetical protein TT 99.8 7.1E-20 2.4E-24 162.8 3.8 216 8-263 2-231 (232)
35 3f1c_A Putative 2-C-methyl-D-e 99.8 7.1E-18 2.4E-22 151.1 16.4 218 8-272 3-235 (246)
36 1vgw_A 4-diphosphocytidyl-2C-m 99.8 9.7E-18 3.3E-22 148.7 16.1 214 1-268 1-227 (231)
37 1qwj_A Cytidine monophospho-N- 99.8 1.7E-17 5.9E-22 147.0 16.0 200 7-270 2-221 (229)
38 2yc3_A 2-C-methyl-D-erythritol 99.7 6.2E-18 2.1E-22 149.7 12.3 214 5-269 1-224 (228)
39 2xwl_A 2-C-methyl-D-erythritol 99.7 1.8E-17 6.3E-22 146.0 14.2 207 8-269 2-218 (223)
40 2i5k_A UTP--glucose-1-phosphat 99.7 8.5E-17 2.9E-21 156.1 16.4 177 7-194 91-320 (488)
41 2waw_A MOBA relate protein; un 99.7 8.1E-17 2.8E-21 139.2 12.2 184 7-269 4-195 (199)
42 2wee_A MOBA-related protein; u 99.7 1.3E-16 4.4E-21 137.8 10.0 110 7-129 4-120 (197)
43 1i52_A 4-diphosphocytidyl-2-C- 99.7 6.3E-16 2.2E-20 137.5 13.1 218 1-270 1-228 (236)
44 1vpa_A 2-C-methyl-D-erythritol 99.6 2.8E-15 9.7E-20 133.0 15.6 207 8-270 13-228 (234)
45 3d5n_A Q97W15_sulso; NESG, SSR 99.6 7.9E-16 2.7E-20 133.0 10.3 112 9-137 3-118 (197)
46 1jv1_A Glcnac1P uridyltransfer 99.6 5E-15 1.7E-19 144.2 17.0 181 7-196 101-343 (505)
47 2e8b_A Probable molybdopterin- 99.6 5E-16 1.7E-20 134.7 7.6 103 5-127 11-120 (201)
48 3q80_A 2-C-methyl-D-erythritol 99.6 1.9E-14 6.6E-19 127.1 15.8 211 8-269 7-229 (231)
49 2px7_A 2-C-methyl-D-erythritol 99.6 3.5E-15 1.2E-19 132.7 10.3 201 7-269 24-231 (236)
50 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.6 1.9E-15 6.4E-20 143.5 7.2 74 110-193 13-90 (374)
51 3rsb_A Adenosylcobinamide-phos 99.5 4.2E-15 1.4E-19 128.3 6.1 124 9-144 1-136 (196)
52 3ngw_A Molybdopterin-guanine d 99.5 7.9E-14 2.7E-18 121.2 13.8 113 9-139 1-117 (208)
53 1e5k_A Molybdopterin-guanine d 99.5 1.1E-13 3.9E-18 119.8 10.6 106 7-129 5-116 (201)
54 2oeg_A UTP-glucose-1-phosphate 99.5 5.2E-13 1.8E-17 129.3 15.0 178 8-194 75-320 (505)
55 1w55_A ISPD/ISPF bifunctional 99.4 3.6E-13 1.2E-17 126.8 10.1 116 7-143 2-125 (371)
56 3oc9_A UDP-N-acetylglucosamine 99.4 1.5E-11 5.1E-16 115.5 16.7 181 7-195 34-275 (405)
57 3r8y_A 2,3,4,5-tetrahydropyrid 99.3 1.9E-12 6.4E-17 115.3 9.1 130 240-372 37-195 (240)
58 2yqc_A UDP-N-acetylglucosamine 99.3 2.2E-11 7.5E-16 118.2 15.7 182 7-196 102-352 (486)
59 3c8v_A Putative acetyltransfer 99.3 9.9E-13 3.4E-17 127.6 1.8 108 76-194 111-237 (496)
60 3r8y_A 2,3,4,5-tetrahydropyrid 99.0 1E-09 3.4E-14 97.5 10.2 89 288-376 108-205 (240)
61 3bfp_A Acetyltransferase; LEFT 99.0 4.2E-09 1.4E-13 90.3 12.7 82 287-372 79-173 (194)
62 3kwd_A Carbon dioxide concentr 98.9 3.7E-09 1.3E-13 92.1 10.4 48 317-373 112-159 (213)
63 1xhd_A Putative acetyltransfer 98.9 5.2E-09 1.8E-13 88.0 10.2 42 287-332 22-67 (173)
64 3r3r_A Ferripyochelin binding 98.9 5E-09 1.7E-13 89.2 10.0 41 287-331 25-69 (187)
65 3ixc_A Hexapeptide transferase 98.9 4.6E-09 1.6E-13 89.8 9.3 42 287-332 43-88 (191)
66 3vbi_A ANTD, galactoside O-ace 98.9 3.9E-09 1.3E-13 91.3 8.9 57 316-372 91-164 (205)
67 3eh0_A UDP-3-O-[3-hydroxymyris 98.9 4.9E-09 1.7E-13 97.9 10.1 15 344-358 201-215 (341)
68 4ea9_A Perosamine N-acetyltran 98.9 6.7E-09 2.3E-13 90.9 10.4 74 290-372 118-195 (220)
69 1v3w_A Ferripyochelin binding 98.9 7E-09 2.4E-13 87.2 9.9 82 287-372 20-118 (173)
70 4ea9_A Perosamine N-acetyltran 98.9 7.7E-09 2.6E-13 90.5 10.2 29 344-372 172-201 (220)
71 3pmo_A UDP-3-O-[3-hydroxymyris 98.9 1.7E-08 6E-13 95.1 12.7 60 310-373 154-235 (372)
72 3bfp_A Acetyltransferase; LEFT 98.9 9.8E-09 3.3E-13 88.0 10.1 82 289-374 95-181 (194)
73 3mqg_A Lipopolysaccharides bio 98.9 9.7E-09 3.3E-13 87.8 10.0 32 342-373 101-133 (192)
74 3eg4_A 2,3,4,5-tetrahydropyrid 98.9 1E-08 3.5E-13 93.8 10.4 64 310-373 163-233 (304)
75 3mqg_A Lipopolysaccharides bio 98.8 1.1E-08 3.7E-13 87.6 9.9 22 287-308 7-28 (192)
76 3r1w_A Carbonic anhydrase; bet 98.8 1.1E-08 3.8E-13 87.2 9.8 43 287-333 29-75 (189)
77 3f1x_A Serine acetyltransferas 98.8 8.4E-09 2.9E-13 94.0 9.3 84 288-373 189-282 (310)
78 3gos_A 2,3,4,5-tetrahydropyrid 98.8 1.3E-08 4.6E-13 91.9 10.4 86 288-373 109-208 (276)
79 3fsy_A Tetrahydrodipicolinate 98.8 6E-09 2.1E-13 93.7 7.7 86 287-374 165-263 (332)
80 2qia_A UDP-N-acetylglucosamine 98.8 1.5E-08 5.1E-13 91.1 10.1 65 310-374 46-122 (262)
81 1qre_A Carbonic anhydrase; bet 98.8 2.5E-08 8.5E-13 88.8 10.6 41 288-332 70-115 (247)
82 3mc4_A WW/RSP5/WWP domain:bact 98.8 1.7E-08 5.8E-13 90.8 9.3 83 288-373 163-247 (287)
83 3r0s_A Acyl-[acyl-carrier-prot 98.8 1.4E-08 4.7E-13 91.5 8.8 65 310-374 45-122 (266)
84 4e79_A UDP-3-O-acylglucosamine 98.8 9.4E-09 3.2E-13 96.5 7.9 15 344-358 169-183 (357)
85 1ssq_A SAT, serine acetyltrans 98.8 2.4E-08 8.2E-13 89.2 10.0 83 288-373 136-220 (267)
86 3hsq_A Acyl-[acyl-carrier-prot 98.8 2.6E-08 8.8E-13 89.4 10.3 16 316-331 48-63 (259)
87 1t3d_A SAT, serine acetyltrans 98.8 3.1E-08 1.1E-12 89.2 10.7 83 288-373 156-240 (289)
88 1j2z_A Acyl-[acyl-carrier-prot 98.8 1.6E-08 5.4E-13 91.3 8.8 64 310-373 42-117 (270)
89 3r3r_A Ferripyochelin binding 98.8 1.7E-08 6E-13 85.8 8.6 72 288-373 44-131 (187)
90 3tv0_A Dynactin subunit 6; LEF 98.8 3.1E-08 1.1E-12 84.9 10.1 44 287-334 22-69 (194)
91 3ixc_A Hexapeptide transferase 98.8 2.9E-08 1E-12 84.8 9.8 63 297-373 74-143 (191)
92 3tk8_A 2,3,4,5-tetrahydropyrid 98.8 2.1E-08 7.1E-13 92.0 9.4 86 288-373 150-249 (316)
93 3eh0_A UDP-3-O-[3-hydroxymyris 98.8 6.3E-08 2.1E-12 90.4 12.8 85 286-374 100-214 (341)
94 4e79_A UDP-3-O-acylglucosamine 98.8 4.5E-08 1.5E-12 91.9 11.6 24 286-309 105-128 (357)
95 4eqy_A Acyl-[acyl-carrier-prot 98.8 2E-08 6.7E-13 91.4 8.9 65 310-374 63-139 (283)
96 3hjj_A Maltose O-acetyltransfe 98.8 4.4E-08 1.5E-12 83.6 10.6 76 293-372 76-164 (190)
97 4e6u_A Acyl-[acyl-carrier-prot 98.7 2.4E-08 8.2E-13 89.9 9.0 64 311-374 49-124 (265)
98 3c8v_A Putative acetyltransfer 98.7 2.2E-08 7.5E-13 97.2 9.2 83 287-373 283-377 (496)
99 3tv0_A Dynactin subunit 6; LEF 98.7 4.9E-08 1.7E-12 83.6 10.2 17 316-332 85-101 (194)
100 3kwd_A Carbon dioxide concentr 98.7 3.7E-08 1.3E-12 85.7 9.5 84 287-374 49-143 (213)
101 3r0s_A Acyl-[acyl-carrier-prot 98.7 4.4E-08 1.5E-12 88.2 10.3 57 315-373 82-139 (266)
102 3t57_A UDP-N-acetylglucosamine 98.7 3.5E-08 1.2E-12 90.7 9.8 42 287-332 11-53 (305)
103 4eqy_A Acyl-[acyl-carrier-prot 98.7 2.5E-08 8.4E-13 90.7 8.6 56 316-373 100-156 (283)
104 3fs8_A QDTC; acetyltransferase 98.7 5.9E-08 2E-12 87.7 10.8 15 317-331 71-85 (273)
105 1xhd_A Putative acetyltransfer 98.7 3.8E-08 1.3E-12 82.6 8.9 64 296-373 52-121 (173)
106 3q1x_A Serine acetyltransferas 98.7 4.8E-08 1.6E-12 89.2 10.0 83 289-373 163-254 (313)
107 3vbi_A ANTD, galactoside O-ace 98.7 3.8E-08 1.3E-12 85.1 8.8 62 287-358 42-106 (205)
108 3tk8_A 2,3,4,5-tetrahydropyrid 98.7 4.6E-08 1.6E-12 89.7 9.8 28 344-371 225-253 (316)
109 3r5d_A Tetrahydrodipicolinate 98.7 2.2E-08 7.5E-13 90.7 7.4 56 317-374 231-286 (347)
110 2qia_A UDP-N-acetylglucosamine 98.7 6.4E-08 2.2E-12 87.0 10.5 56 316-373 83-139 (262)
111 3ftt_A Putative acetyltransfer 98.7 6.4E-08 2.2E-12 83.2 10.0 78 293-374 72-168 (199)
112 4e6u_A Acyl-[acyl-carrier-prot 98.7 4.4E-08 1.5E-12 88.2 9.3 57 315-373 84-141 (265)
113 3fs8_A QDTC; acetyltransferase 98.7 9.7E-08 3.3E-12 86.3 11.4 42 288-333 13-55 (273)
114 1v3w_A Ferripyochelin binding 98.7 4.7E-08 1.6E-12 82.1 8.6 51 310-369 82-133 (173)
115 3r1w_A Carbonic anhydrase; bet 98.7 6.5E-08 2.2E-12 82.4 9.5 63 297-373 60-135 (189)
116 3nz2_A Hexapeptide-repeat cont 98.7 4.3E-08 1.5E-12 84.0 8.0 81 290-374 71-170 (195)
117 2ggo_A 401AA long hypothetical 98.7 5.9E-08 2E-12 92.7 9.7 40 310-359 291-330 (401)
118 1qre_A Carbonic anhydrase; bet 98.7 7.4E-08 2.5E-12 85.7 9.5 49 316-373 140-188 (247)
119 3jqy_B NEUO, polysialic acid O 98.7 6.5E-08 2.2E-12 86.4 9.1 74 295-372 105-193 (252)
120 2pig_A Putative transferase; S 98.7 4.8E-08 1.6E-12 90.3 8.3 66 290-369 59-126 (334)
121 2v0h_A Bifunctional protein GL 98.7 4.4E-08 1.5E-12 95.1 8.5 72 289-374 259-331 (456)
122 3hjj_A Maltose O-acetyltransfe 98.7 9.2E-08 3.1E-12 81.6 9.4 31 344-374 141-172 (190)
123 3hsq_A Acyl-[acyl-carrier-prot 98.6 6.6E-08 2.2E-12 86.7 8.8 87 287-373 4-116 (259)
124 3ftt_A Putative acetyltransfer 98.6 9.3E-08 3.2E-12 82.2 9.0 44 316-369 130-173 (199)
125 3eg4_A 2,3,4,5-tetrahydropyrid 98.6 8.4E-08 2.9E-12 87.7 9.1 72 301-372 158-238 (304)
126 3srt_A Maltose O-acetyltransfe 98.6 1.5E-07 5E-12 80.2 9.8 73 295-371 76-161 (188)
127 4fce_A Bifunctional protein GL 98.6 5.5E-08 1.9E-12 94.5 8.1 71 289-373 262-333 (459)
128 3gos_A 2,3,4,5-tetrahydropyrid 98.6 1E-07 3.5E-12 86.1 9.1 72 301-372 133-213 (276)
129 1j2z_A Acyl-[acyl-carrier-prot 98.6 1.4E-07 4.9E-12 85.0 9.9 57 315-373 78-135 (270)
130 3f1x_A Serine acetyltransferas 98.6 8.5E-08 2.9E-12 87.3 8.3 31 344-374 258-289 (310)
131 2rij_A Putative 2,3,4,5-tetrah 98.6 6.5E-08 2.2E-12 90.2 7.4 56 318-374 260-320 (387)
132 3pmo_A UDP-3-O-[3-hydroxymyris 98.6 2E-07 6.7E-12 87.9 10.7 45 286-334 122-167 (372)
133 1ocx_A Maltose O-acetyltransfe 98.6 1.2E-07 4.1E-12 80.2 8.2 75 294-372 71-158 (182)
134 3t57_A UDP-N-acetylglucosamine 98.6 1.3E-07 4.5E-12 86.8 9.1 22 311-332 49-71 (305)
135 3srt_A Maltose O-acetyltransfe 98.6 1.7E-07 5.8E-12 79.8 8.5 37 316-361 132-168 (188)
136 2p2o_A Maltose transacetylase; 98.6 1.5E-07 5.1E-12 79.8 8.1 77 293-373 72-161 (185)
137 1hm9_A GLMU, UDP-N-acetylgluco 98.5 1.4E-07 4.6E-12 92.1 8.6 20 288-307 285-304 (468)
138 4hur_A Virginiamycin A acetylt 98.5 1.6E-07 5.4E-12 82.1 8.2 31 343-373 119-150 (220)
139 2iu8_A LPXD, UDP-3-O-[3-hydrox 98.5 2.3E-07 7.7E-12 87.8 9.4 31 344-374 191-242 (374)
140 2pig_A Putative transferase; S 98.5 2E-07 6.9E-12 86.1 8.5 35 340-374 159-193 (334)
141 1ocx_A Maltose O-acetyltransfe 98.5 1.6E-07 5.4E-12 79.4 7.1 45 316-370 128-172 (182)
142 3mc4_A WW/RSP5/WWP domain:bact 98.5 2E-07 6.7E-12 83.9 7.9 60 294-362 183-253 (287)
143 2p2o_A Maltose transacetylase; 98.5 1.9E-07 6.6E-12 79.1 7.4 46 316-371 130-175 (185)
144 3q1x_A Serine acetyltransferas 98.5 3.1E-07 1.1E-11 83.8 8.8 31 344-374 230-261 (313)
145 1krr_A Galactoside O-acetyltra 98.5 3.7E-07 1.3E-11 78.4 8.7 78 293-374 73-169 (203)
146 3st8_A Bifunctional protein GL 98.5 3.1E-07 1E-11 90.4 9.3 59 313-374 383-449 (501)
147 1ssq_A SAT, serine acetyltrans 98.4 5.5E-07 1.9E-11 80.4 8.8 42 317-368 190-231 (267)
148 3r3i_A UTP--glucose-1-phosphat 98.4 1.3E-05 4.3E-10 77.4 18.1 180 6-195 125-363 (528)
149 1t3d_A SAT, serine acetyltrans 98.4 1E-06 3.6E-11 79.3 8.8 26 108-133 40-67 (289)
150 3r5d_A Tetrahydrodipicolinate 98.4 7.7E-07 2.6E-11 80.7 7.8 16 312-327 231-247 (347)
151 3brk_X Glucose-1-phosphate ade 98.4 4.1E-07 1.4E-11 87.4 6.6 72 292-374 299-371 (420)
152 3jqy_B NEUO, polysialic acid O 98.4 6.2E-07 2.1E-11 80.0 7.2 36 317-361 164-199 (252)
153 3nz2_A Hexapeptide-repeat cont 98.3 1.6E-06 5.5E-11 74.1 8.7 44 316-369 132-175 (195)
154 2wlg_A Polysialic acid O-acety 98.3 1.6E-06 5.6E-11 75.3 8.7 74 296-373 80-168 (215)
155 3fsy_A Tetrahydrodipicolinate 98.3 1.5E-06 5.3E-11 78.1 8.2 11 346-356 252-262 (332)
156 4hur_A Virginiamycin A acetylt 98.3 8E-07 2.7E-11 77.5 6.2 37 316-361 119-155 (220)
157 1krr_A Galactoside O-acetyltra 98.3 3.1E-06 1.1E-10 72.6 9.5 44 316-369 131-174 (203)
158 3eev_A Chloramphenicol acetylt 98.3 2.2E-06 7.6E-11 74.3 8.4 16 316-331 58-73 (212)
159 3eev_A Chloramphenicol acetylt 98.3 3.9E-06 1.3E-10 72.7 9.7 44 316-369 111-154 (212)
160 2wlg_A Polysialic acid O-acety 98.2 3.3E-06 1.1E-10 73.3 8.6 69 296-374 59-151 (215)
161 1yp2_A Glucose-1-phosphate ade 98.2 4.7E-06 1.6E-10 80.7 9.3 28 323-360 389-416 (451)
162 4e8l_A Virginiamycin A acetylt 98.1 5.8E-06 2E-10 71.8 8.3 58 316-373 65-149 (219)
163 1mr7_A Streptogramin A acetylt 98.0 7.4E-06 2.5E-10 70.7 6.5 28 344-371 114-142 (209)
164 2rij_A Putative 2,3,4,5-tetrah 98.0 8.2E-06 2.8E-10 76.1 7.2 17 249-265 168-186 (387)
165 1xat_A Xenobiotic acetyltransf 98.0 2.8E-05 9.5E-10 67.1 9.7 17 315-331 55-71 (212)
166 3gue_A UTP-glucose-1-phosphate 97.9 0.00017 6E-09 69.0 14.7 181 8-195 76-318 (484)
167 1mr7_A Streptogramin A acetylt 97.7 4.9E-05 1.7E-09 65.4 7.0 44 316-369 113-156 (209)
168 4e8l_A Virginiamycin A acetylt 97.7 0.00015 5E-09 62.9 9.8 44 316-369 118-161 (219)
169 1xat_A Xenobiotic acetyltransf 97.7 0.0001 3.4E-09 63.6 8.5 44 316-369 110-153 (212)
170 3ogz_A UDP-sugar pyrophosphory 97.4 0.00077 2.6E-08 66.3 10.9 181 8-196 114-375 (630)
171 2i5e_A Hypothetical protein MM 97.1 0.0004 1.4E-08 59.8 4.3 99 8-128 3-111 (211)
172 1qg8_A Protein (spore coat pol 88.9 3.4 0.00012 35.3 10.8 87 42-133 14-116 (255)
173 3bcv_A Putative glycosyltransf 87.8 4.3 0.00015 34.2 10.6 55 80-138 62-117 (240)
174 1xhb_A Polypeptide N-acetylgal 86.6 4.9 0.00017 38.3 11.2 99 36-137 35-146 (472)
175 3cgx_A Putative nucleotide-dip 78.2 6.2 0.00021 34.1 7.5 82 42-131 38-129 (242)
176 2d7i_A Polypeptide N-acetylgal 78.0 14 0.00047 36.3 10.8 96 36-135 118-226 (570)
177 2z86_A Chondroitin synthase; G 61.4 35 0.0012 33.6 9.7 97 36-137 99-206 (625)
178 3ckj_A Putative uncharacterize 60.5 16 0.00054 32.8 6.4 53 86-141 114-169 (329)
179 2ffu_A Ppgalnact-2, polypeptid 56.8 61 0.0021 30.8 10.3 93 36-136 72-177 (501)
180 2z86_A Chondroitin synthase; G 50.9 60 0.002 31.8 9.3 90 40-134 386-483 (625)
181 4hg6_A Cellulose synthase subu 44.4 87 0.003 32.0 9.5 45 87-134 222-267 (802)
182 3f1y_A Mannosyl-3-phosphoglyce 42.1 24 0.00081 32.7 4.4 100 88-194 164-273 (387)
183 4fix_A UDP-galactofuranosyl tr 41.1 1E+02 0.0035 30.7 9.1 97 39-140 190-303 (657)
184 2nxv_A ATP synthase subunits r 40.4 1.1E+02 0.0039 25.7 8.4 75 54-132 20-101 (249)
185 2c0n_A A197; thermophil protei 38.3 96 0.0033 25.7 6.9 86 100-196 47-133 (203)
186 3l7i_A Teichoic acid biosynthe 37.1 7.1 0.00024 39.6 0.0 75 54-131 34-109 (729)
187 3kcq_A Phosphoribosylglycinami 25.7 1.1E+02 0.0039 25.5 5.6 22 3-26 3-24 (215)
188 2bo4_A Mannosylglycerate synth 24.6 2.1E+02 0.0071 26.4 7.7 53 88-141 73-128 (397)
189 3tqr_A Phosphoribosylglycinami 21.3 3.5E+02 0.012 22.4 7.9 17 8-26 5-21 (215)
No 1
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-45 Score=357.90 Aligned_cols=330 Identities=17% Similarity=0.268 Sum_probs=245.1
Q ss_pred CCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCc-chhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCc
Q 016989 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQ-PMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRI 78 (379)
Q Consensus 5 ~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~-pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~ 78 (379)
|+++|+||||||| .|+||+|+|..+||+|+|++|+ |||+|+++.|.+ |+|++.+..+.+.+|+... ++.
T Consensus 9 mm~~~~avILAaG--~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~---~~~ 83 (420)
T 3brk_X 9 LARDAMAYVLAGG--RGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRG---WDF 83 (420)
T ss_dssp GGGGEEEEEEECC--CCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHH---SCC
T ss_pred hhhceEEEEEcCC--CCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhh---hcc
Confidence 5567899999999 9999999999999999999999 999999999875 6666665555688888752 221
Q ss_pred -------cEEEec--CC--CC---CChHHHHHHHHHhhccCCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEEEe
Q 016989 79 -------PVRYLR--ED--KP---HGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVIKV 144 (379)
Q Consensus 79 -------~i~~~~--~~--~~---~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~dl~~~l~~~~~~~~~~ti~~~~~ 144 (379)
.+.+.. +. .+ .|++++++.+++++.....++|++++||++++.++.++++.|.++++++|+++.+.
T Consensus 84 ~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~ 163 (420)
T 3brk_X 84 FRPERNESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEV 163 (420)
T ss_dssp CCGGGTCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEE
T ss_pred ccccccCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeec
Confidence 133322 11 12 79999999999888642235799999999888899999999998888899998876
Q ss_pred CCCCCCceeEEEEeCCCCcEEEeeecCCCcc-------cceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhh
Q 016989 145 SAESASQFGELVADPDTNELLHYTEKPETFV-------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEAL 216 (379)
Q Consensus 145 ~~~~~~~~g~v~~d~~~~~v~~~~ekp~~~~-------~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~ 216 (379)
+..++..||.+..++ +++|..|.|||.... ..+.++|+|+|++++| +.+.+......+
T Consensus 164 ~~~~~~~~g~v~~d~-~g~v~~~~ekp~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~------------- 229 (420)
T 3brk_X 164 PRMEATGFGVMHVNE-KDEIIDFIEKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAADPTS------------- 229 (420)
T ss_dssp ETTGGGGSEEEEECT-TSBEEEEEESCSSCCCBTTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC----------------
T ss_pred CccccCcccEEEECC-CCcEEEeEeCCCccccccccccceEEeeeeEEEeHHHHHHHHHHhcccCCc-------------
Confidence 545677999998884 789999999986543 6799999999999986 566543321110
Q ss_pred hhhccccccccccccccccccccCCceEEEEEc-----------ccchhhcCCccchhhcchHHHHhhhhcC---Cc--c
Q 016989 217 QSATRNLTTDFVRLDQDILSPLAGKKQLYTYET-----------MDFWEQIKTPGMSLKCSGLYLAQFRLTS---PN--L 280 (379)
Q Consensus 217 ~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~-----------~~~w~~i~t~~d~~~a~~~~l~~~~~~~---~~--~ 280 (379)
..+| ..++++.++++.++++|.+ +++|.++|||++|+++++.++.++.... +. +
T Consensus 230 -------~~~~---~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i 299 (420)
T 3brk_X 230 -------SRDF---GKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPI 299 (420)
T ss_dssp -----------------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCC
T ss_pred -------cccc---hHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCce
Confidence 1112 1577887776669999999 8899999999999999987765432111 00 1
Q ss_pred ccCCCCCCCeEEec-----CeEECCCcEECCCCC-CCcEEeceEECCCCEECCCcEEeecccccccccceEECCCcEECC
Q 016989 281 LASGDGTKNATIIG-----DVYVHPSAKIHPTAK-ENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVED 354 (379)
Q Consensus 281 ~~~~~~~~~~~i~~-----~~~i~~~~~i~~~~~-~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~ 354 (379)
.......+.+.+++ .+.+ +++.|+++|+ .++.|.+|+||++|.||++|.|.+ |+||++|.||+
T Consensus 300 ~~~~~i~~~~~i~~~~~~~~~~i-~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~----------~~i~~~~~i~~ 368 (420)
T 3brk_X 300 WTYAEITPPAKFVHDDEDRRGSA-VSSVVSGDCIISGAALNRSLLFTGVRANSYSRLEN----------AVVLPSVKIGR 368 (420)
T ss_dssp CCCCCCCCCCEEECBCSSCBCEE-ESCEECSSCEEESCEEESCEECTTCEECTTCEEEE----------EEECTTCEECT
T ss_pred eeccccCCCcEEecccccCCcEe-cCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcc----------eEEcCCCEECC
Confidence 11112234555554 1111 1444444444 455788999999999999999987 99999999999
Q ss_pred CcEEeccEECCCceeccccc
Q 016989 355 EVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 355 ~~~i~~~ii~~~~~i~~~~~ 374 (379)
+|.|.+|+||+++.|++++.
T Consensus 369 ~~~i~~~~ig~~~~i~~~~~ 388 (420)
T 3brk_X 369 HAQLSNVVIDHGVVIPEGLI 388 (420)
T ss_dssp TCEEEEEEECTTCEECTTCE
T ss_pred CCEEeceEECCCCEECCCCE
Confidence 99999999999999998864
No 2
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=1.4e-42 Score=339.75 Aligned_cols=327 Identities=20% Similarity=0.335 Sum_probs=223.5
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCc-chhHHHHHhcCc-----EEEEcccchHHHHHHHHhhc-ccCC--
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQ-PMVHHPISACKR-----IYLVGFYEEREFALYVSSIS-NELR-- 77 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~-pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~-~~~~-- 77 (379)
++|+||||||| .|+||+|||..+||+|+|++|+ |||+|+++.|.+ |+|++.+..+.+.+++.... ..++
T Consensus 19 ~~~~avILAaG--~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~ 96 (451)
T 1yp2_A 19 RSVLGIILGGG--AGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGY 96 (451)
T ss_dssp HHEEEEEC--------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC------
T ss_pred cceEEEEECCC--CCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhhhcccccc
Confidence 45899999999 9999999999999999999999 999999999865 66666655556888876421 0111
Q ss_pred -----ccEEEecC-----CCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEEEeCCC
Q 016989 78 -----IPVRYLRE-----DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVIKVSAE 147 (379)
Q Consensus 78 -----~~i~~~~~-----~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~dl~~~l~~~~~~~~~~ti~~~~~~~~ 147 (379)
+++....+ +...|++++++.+++++.....++|++++||++++.++.++++.|.++++++|+++.+.+..
T Consensus 97 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 176 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEK 176 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHH
T ss_pred cccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChh
Confidence 22322211 22589999999999988632235799999999888899999999998888899988877433
Q ss_pred CCCceeEEEEeCCCCcEEEeeecCCCc---------------------ccceeeeeEEEeCHhhH-HHhhccccccccch
Q 016989 148 SASQFGELVADPDTNELLHYTEKPETF---------------------VSDLINCGVYVFTPDIF-NAIQGVSSQRKDRE 205 (379)
Q Consensus 148 ~~~~~g~v~~d~~~~~v~~~~ekp~~~---------------------~~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~ 205 (379)
++..||++..|+ +++|..|.|||... ...++++|+|+|++++| +.+.+..+.
T Consensus 177 ~~~~~g~v~~d~-~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~----- 250 (451)
T 1yp2_A 177 RATAFGLMKIDE-EGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPG----- 250 (451)
T ss_dssp HHTTSEEEEECT-TSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTT-----
T ss_pred hcccCCEEEECC-CCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhccc-----
Confidence 567899998884 78999999998632 25688999999999987 555543111
Q ss_pred hhhhcchhhhhhhhccccccccccccccccccccCC-ceEEEEEcccchhhcCCccchhhcchHHHHhhhh----cCCc-
Q 016989 206 NLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGK-KQLYTYETMDFWEQIKTPGMSLKCSGLYLAQFRL----TSPN- 279 (379)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~-~~v~~~~~~~~w~~i~t~~d~~~a~~~~l~~~~~----~~~~- 279 (379)
..++. .++++.++++ .++++|.++++|.++|||++|.++++.++.+... ..+.
T Consensus 251 ------------------~~~~~---~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~ 309 (451)
T 1yp2_A 251 ------------------ANDFG---SEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSA 309 (451)
T ss_dssp ------------------CCCTT---TTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSS
T ss_pred ------------------ccchH---hhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCC
Confidence 11221 5667666554 7899999999999999999999998777654310 0010
Q ss_pred -cccCCCCCCCeEEecCeEECCCcEECCCCC-CCcEEeceEECCCCEECCCcEEeecccccccccceEECCC--------
Q 016989 280 -LLASGDGTKNATIIGDVYVHPSAKIHPTAK-ENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEA-------- 349 (379)
Q Consensus 280 -~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~-~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~-------- 349 (379)
+.......+++.| +++.| .++.|+++|+ ..+.|.+++||++|.||++|.|.++ ++..+
T Consensus 310 ~i~~~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~----------~~~~~~~~~~~~~ 377 (451)
T 1yp2_A 310 PIYTQPRYLPPSKM-LDADV-TDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDS----------LLMGADYYETDAD 377 (451)
T ss_dssp CCCCCCCCCCCEEE-EEEEE-EEEEECTTCEEEEEEEESCEECTTCEECTTCEEESC----------EECCCSSCCCHHH
T ss_pred eeccCCccCCCeEE-cceEE-eCeEECCCCEEcceEEeccEECCCCEECCCCEEcCc----------eEECCCCcccccc
Confidence 1111112244443 33333 2345555544 2256778999999999999999874 33333
Q ss_pred -----------cEECCCcEEeccEECCCceeccccc
Q 016989 350 -----------VGVEDEVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 350 -----------~~i~~~~~i~~~ii~~~~~i~~~~~ 374 (379)
+.||++|.|.+|+||+++.||+++.
T Consensus 378 ~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~ 413 (451)
T 1yp2_A 378 RKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVK 413 (451)
T ss_dssp HHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCE
T ss_pred cccccccCceeEEECCCCEEeccEeCCCcEECCCCE
Confidence 6666666666666666666665543
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=4e-41 Score=333.22 Aligned_cols=334 Identities=16% Similarity=0.233 Sum_probs=227.9
Q ss_pred CCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCcc
Q 016989 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIP 79 (379)
Q Consensus 5 ~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~ 79 (379)
+...+.+|||||| +||||+|+| ||||+||+|||||+|+|+.|.+ |+|++.+..+.+++|+++..+.++.+
T Consensus 9 ~~~~~~vvILAaG--~GtRm~~~~---pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~ 83 (501)
T 3st8_A 9 FPGDTAVLVLAAG--PGTRMRSDT---PKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRT 83 (501)
T ss_dssp ---CEEEEEEECS--CCGGGCCSS---CGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTSC
T ss_pred CCCCceEEEECCc--CcccCCCCC---CHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCc
Confidence 3456899999999 999999954 9999999999999999999986 55555555567999998766678889
Q ss_pred EEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEE
Q 016989 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVA 157 (379)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~ 157 (379)
+.|+.|++++||++|++++++++.++..+.+++++||.++ ...+.++++.|+..++++++++.+. .+|..||.+..
T Consensus 84 i~~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~--~dp~~yG~i~~ 161 (501)
T 3st8_A 84 IDVALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTL--DDPFGYGRILR 161 (501)
T ss_dssp CEEEECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTSCEEEE
T ss_pred EEEEEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeecc--CCchhcccccc
Confidence 9999999999999999999999987656789999999977 4568999999999999999999987 48999999999
Q ss_pred eCCCCcEEEeeecCCC----cccceeeeeEEEeCHhhHH-Hhhccccccccchhhhhcchhhhhhhhccccccccccccc
Q 016989 158 DPDTNELLHYTEKPET----FVSDLINCGVYVFTPDIFN-AIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQ 232 (379)
Q Consensus 158 d~~~~~v~~~~ekp~~----~~~~~~~~Giy~~~~~~l~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (379)
++ +++|..+.|||+. ...+++++|+|+|+++.|. .+......+.++++ |+ .
T Consensus 162 ~~-~g~v~~ivEk~~~~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~--yl---------------------t 217 (501)
T 3st8_A 162 TQ-DHEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQEL--YL---------------------T 217 (501)
T ss_dssp CT-TCCEEEEECGGGCCHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSC--CT---------------------T
T ss_pred cc-ceeEEeeccccCCChhhccceeeeceeeeecchhHHHhhhhhccccccccc--ch---------------------h
Confidence 85 8999999998653 3467899999999988764 55555555555554 33 3
Q ss_pred ccccccc-CCceEEEEEcccchhhcCCccchhhc--chHHHHhhh----h-----cCCccc-cC--------CCCCCCeE
Q 016989 233 DILSPLA-GKKQLYTYETMDFWEQIKTPGMSLKC--SGLYLAQFR----L-----TSPNLL-AS--------GDGTKNAT 291 (379)
Q Consensus 233 d~l~~l~-~~~~v~~~~~~~~w~~i~t~~d~~~a--~~~~l~~~~----~-----~~~~~~-~~--------~~~~~~~~ 291 (379)
+++..+. .+..+.++.....|...+.......+ ...+..+.. . ..+... .. ..+.+++.
T Consensus 218 d~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~ 297 (501)
T 3st8_A 218 DVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQ 297 (501)
T ss_dssp HHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEE
T ss_pred hHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceee
Confidence 4444433 34677888887777766555433322 222211111 0 111100 00 01134555
Q ss_pred EecCeEECCCcEECCCCC-----------------------CCcEEe-ceEECCCCEECCCcEEeecccccccccceEEC
Q 016989 292 IIGDVYVHPSAKIHPTAK-----------------------ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILG 347 (379)
Q Consensus 292 i~~~~~i~~~~~i~~~~~-----------------------~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~ 347 (379)
+.+.+.++.++.+++++. .++.++ .+.+++++.|+++++|++ .+++++|+||
T Consensus 298 i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~----~v~ik~s~Ig 373 (501)
T 3st8_A 298 LLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGA----FVEVKNSTIG 373 (501)
T ss_dssp EETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEE----TEEEESCEEC
T ss_pred ecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCC----eEEEccceec
Confidence 555555556666555554 122222 233333333333333333 2455667777
Q ss_pred CCcEECCCcEEeccEECCCceecccc
Q 016989 348 EAVGVEDEVVVTNSIVLPNKTLNVSV 373 (379)
Q Consensus 348 ~~~~i~~~~~i~~~ii~~~~~i~~~~ 373 (379)
++|+|++.+.+.+|+||++|.||+++
T Consensus 374 ~gskI~~~~~i~d~~Ig~~v~IG~g~ 399 (501)
T 3st8_A 374 TGTKVPHLTYVGDADIGEYSNIGASS 399 (501)
T ss_dssp TTCEEEESCEEESEEECSSCEECTTC
T ss_pred CCcEEeccceecCceEcCCCEECCCE
Confidence 77776666666666666666666654
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=4.4e-39 Score=310.33 Aligned_cols=305 Identities=21% Similarity=0.340 Sum_probs=214.6
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEEEe
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~ 83 (379)
|+||||||| .|+||+|+|...||+|+|++|+|||+|+++.|.+ ++|++.+. +.+++..... ++.++
T Consensus 1 m~aiIlA~G--~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~----~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAG--SGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK----EISIV 71 (401)
T ss_dssp CEEEEECCC--CCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT----TCEEE
T ss_pred CeEEEEcCc--CccccCcccCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC----cEEEE
Confidence 589999999 9999999999999999999999999999999865 66665543 6666654211 34445
Q ss_pred cCCC-CCChHHHHHHHHHhhccCCCCeEEEEcCCeeec--CChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCC
Q 016989 84 REDK-PHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS--FPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (379)
Q Consensus 84 ~~~~-~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~--~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~ 160 (379)
.++. ..|++++++.+.+ .+++++++||+++. .+++++++ .++.++++.+.. ++..|+.+..++
T Consensus 72 ~~~~~~~g~~~~l~~~~~------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~--~~~~~~~v~~~~- 137 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSAKF------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS--NPKDYGVLVLDN- 137 (401)
T ss_dssp ECCTTCCBSTTTGGGCCC------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS--CCSSSCEEEECT-
T ss_pred eCCCCCCChHHHHHHhcc------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC--CCcceeEEEECC-
Confidence 4554 6788888887654 24699999999995 56777765 355778777763 566788888874
Q ss_pred CCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccccccccC
Q 016989 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAG 240 (379)
Q Consensus 161 ~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~ 240 (379)
++++..+.|||..+...+.++|+|+|++++|+.+........ ++ .++ .++++.+..
T Consensus 138 ~g~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~-~~-------------------~~~----~~~~~~~~~ 193 (401)
T 2ggo_A 138 QNNLSKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISISER-GE-------------------LEL----TDAINLMAK 193 (401)
T ss_dssp TSSEEEEECSCSSCSCSEEEEEEEEEETHHHHHHHHSCCCSS-SC-------------------BCH----HHHHHHHHH
T ss_pred CCeEEEEEECCCCCCCcEEEEEEEEEcHHHHHHhhhcCcCCC-Cc-------------------eEH----HHHHHHHHC
Confidence 689999999987777889999999999999988764321110 00 111 456665522
Q ss_pred CceEEEEEcccchhhcCCccchhhcchHHHHhhhhcCCccccCCCCCCCeEEecCeEECCCcEECCCCC--------CCc
Q 016989 241 KKQLYTYETMDFWEQIKTPGMSLKCSGLYLAQFRLTSPNLLASGDGTKNATIIGDVYVHPSAKIHPTAK--------ENA 312 (379)
Q Consensus 241 ~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~--------~~~ 312 (379)
+.++.++..+++|.+++||+||.+++++++.++.. + ......++++.+.+++.|++++.|++++. ++|
T Consensus 194 g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~--~--~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~ 269 (401)
T 2ggo_A 194 DHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVF--S--QNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGS 269 (401)
T ss_dssp HSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCC--C--EECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTC
T ss_pred CCcEEEEEecceEEcCCCHHHHHHHHHHHHHhccc--c--cccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCC
Confidence 35899999988999999999999999888766431 1 11122334455555555555555554443 222
Q ss_pred ------EEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceeccccc
Q 016989 313 ------VVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 313 ------~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~~ 374 (379)
.|. +++||++|.||++|.| ++|+|++++.|++++.|.+|+||+++.|+.++.
T Consensus 270 ~I~~~~~i~~~~~Ig~~~~ig~~~~i----------~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~ 328 (401)
T 2ggo_A 270 EIGPNSYLRPYTILVEKNKIGASVEV----------KESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTL 328 (401)
T ss_dssp EECSSCEECTTEEECSSCEEEETCEE----------ESEEECTTCEEEESCEEESCEECTTCEECTTCE
T ss_pred EECCCCEEcCCcEECCCCEECCCCEE----------ecCEEcCCcEECCCceEcceEECCCcEECCCcE
Confidence 333 3444444444444444 348888888888888888888888888887765
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=4.9e-38 Score=308.98 Aligned_cols=226 Identities=19% Similarity=0.340 Sum_probs=173.5
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEEE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
.-+||||||| .|+||++ .+||+|+|++|+|||+|+++.|.+ |+|++.+..+.+.+++.. .+.+
T Consensus 11 ~~~~vIlAaG--~g~R~~~---~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~-------~i~~ 78 (468)
T 1hm9_A 11 SNFAIILAAG--KGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG-------QTEF 78 (468)
T ss_dssp CEEEEEECCC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS-------SSEE
T ss_pred CCcEEEEcCC--CCccCCC---CCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC-------CcEE
Confidence 3489999999 9999997 789999999999999999999875 666665554456555432 3445
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCC
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~ 160 (379)
+.++...|++++++.+++++... .+.+++++||+++ +.+++++++.|.+.++++++++.+. .++..|+.+..++
T Consensus 79 v~~~~~~G~~~sl~~a~~~~~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~--~~~~~~g~v~~d~- 154 (468)
T 1hm9_A 79 VTQSEQLGTGHAVMMTEPILEGL-SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAET--DNPFGYGRIVRND- 154 (468)
T ss_dssp EECSSCCCHHHHHHTTHHHHTTC-CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTSCEEEECT-
T ss_pred EeCCccCChHHHHHHHHHHhccC-CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEecc--CCCCceeEEEECC-
Confidence 55667789999999999988631 3579999999975 6789999999988888888888776 3667899888874
Q ss_pred CCcEEEeeecCC----CcccceeeeeEEEeCHh-hHHHhhccccccccchhhhhcchhhhhhhhcccccccccccccccc
Q 016989 161 TNELLHYTEKPE----TFVSDLINCGVYVFTPD-IFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDIL 235 (379)
Q Consensus 161 ~~~v~~~~ekp~----~~~~~~~~~Giy~~~~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l 235 (379)
+++|..+.|||. .....+.++|+|+|+++ +++.+.+.......++ ++ + .|++
T Consensus 155 ~g~v~~~~ek~~~~~~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~---------------------~~-~-~d~~ 211 (468)
T 1hm9_A 155 NAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGE---------------------YY-I-TDVI 211 (468)
T ss_dssp TCCEEEEECTTTCCTTGGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCS---------------------CC-T-THHH
T ss_pred CCCEEEEEECCCCChHHhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCe---------------------EE-H-HHHH
Confidence 789999999864 23467899999999998 4577665432211111 11 1 6777
Q ss_pred ccccC-CceEEEEEcccchhhc--CCccchhhcchHHHHh
Q 016989 236 SPLAG-KKQLYTYETMDFWEQI--KTPGMSLKCSGLYLAQ 272 (379)
Q Consensus 236 ~~l~~-~~~v~~~~~~~~w~~i--~t~~d~~~a~~~~l~~ 272 (379)
+.+++ +.++++|.++++|.++ +||+||.+++.++..+
T Consensus 212 ~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~ 251 (468)
T 1hm9_A 212 GIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRR 251 (468)
T ss_dssp HHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHH
Confidence 77765 4689999999999885 5999999998776554
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=1.2e-36 Score=298.37 Aligned_cols=312 Identities=20% Similarity=0.263 Sum_probs=216.9
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
+++.||||||| .|+||++ .+||+|+|++|+|||+|+++.|.+ ++|++.+..+.+++++.. .+ +.
T Consensus 7 ~~~~aiIlA~G--~g~Rl~~---~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~----~~--~~ 75 (459)
T 4fce_A 7 SSMSVVILAAG--KGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLAD----PS--LN 75 (459)
T ss_dssp CCEEEEEEECC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-----------C
T ss_pred CcceEEEECCC--CCccCCC---CCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc----CC--cE
Confidence 47999999999 9999998 889999999999999999999975 666666555567777653 22 33
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeC
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~ 159 (379)
++.++...|++++++.+++++.. .+++++++||.++ +.+++++++.|.+ .++++++.+. .++..|+.+..+
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~--~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~--~~~~~~g~v~~~- 148 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFAD--DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKL--DNPSGYGRIVRE- 148 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC--SCCTTSCEEEEE-
T ss_pred EEeCCCCCCcHHHHHHHHHhcCC--CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEec--CCCCcccEEEeC-
Confidence 44466778999999999998863 2579999999976 6779999998765 4567777665 467889988887
Q ss_pred CCCcEEEeeecCC----CcccceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhhhhhccccccccccccccc
Q 016989 160 DTNELLHYTEKPE----TFVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (379)
Q Consensus 160 ~~~~v~~~~ekp~----~~~~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~ 234 (379)
++++..+.|||. .....+.++|+|+|+++.+ +++........++++ + + .|+
T Consensus 149 -~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~---------------------~-~-~d~ 204 (459)
T 4fce_A 149 -NGDVVGIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNAQGEF---------------------Y-I-TDI 204 (459)
T ss_dssp -TTEEEEEECGGGCCTTGGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSC---------------------C-T-THH
T ss_pred -CCcEEEEEECCCCChHHhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcE---------------------E-H-HHH
Confidence 689999999853 3456789999999998865 666544322111111 1 1 566
Q ss_pred cccccC-CceEEEEEcccch--hhcCCccchhhcchHHHHhhhh--c-------CCccc---------cCCCCCCCeEEe
Q 016989 235 LSPLAG-KKQLYTYETMDFW--EQIKTPGMSLKCSGLYLAQFRL--T-------SPNLL---------ASGDGTKNATII 293 (379)
Q Consensus 235 l~~l~~-~~~v~~~~~~~~w--~~i~t~~d~~~a~~~~l~~~~~--~-------~~~~~---------~~~~~~~~~~i~ 293 (379)
++.+.+ +.++.++..+++| .+++||+||..+++++..++.. . .|... ....+.+++.|.
T Consensus 205 ~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~~~i~ 284 (459)
T 4fce_A 205 IALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIE 284 (459)
T ss_dssp HHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECTTEEEE
T ss_pred HHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECCCeeec
Confidence 666654 4689999998777 5689999999998776654421 0 11000 000112444444
Q ss_pred cCeEECCCcEECCCCCCCcEEeceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECCCceeccc
Q 016989 294 GDVYVHPSAKIHPTAKENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLPNKTLNVS 372 (379)
Q Consensus 294 ~~~~i~~~~~i~~~~~~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~i~~~ 372 (379)
+++.||+++.|++ ++.|.+++||++|.|+++|.|.+ ++||++|.||++|.|. +++|++++.||++
T Consensus 285 ~~~~ig~~~~I~~----~~~i~~~~Ig~~~~I~~~~~i~~----------~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~ 350 (459)
T 4fce_A 285 GHVILGDRVRIGT----GCVLKNCVIGDDSEISPYTVLED----------ARLDANCTVGPFARLRPGAELAEGAHVGNF 350 (459)
T ss_dssp EEEEECTTCEECT----TCEEESCEECTTCEECSSCEEES----------CEECTTCEECSSEEECTTCEECTTCEEEEE
T ss_pred cceEECCCCEECC----CCEEeccEECCCCEECCCcEEeC----------CEECCCCEECCccEECCCcEECCCcEECCC
Confidence 4444455555553 34566677777777777777654 7777777777777775 7777777777765
Q ss_pred cc
Q 016989 373 VH 374 (379)
Q Consensus 373 ~~ 374 (379)
+.
T Consensus 351 ~~ 352 (459)
T 4fce_A 351 VE 352 (459)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=7.7e-36 Score=292.40 Aligned_cols=311 Identities=18% Similarity=0.258 Sum_probs=211.6
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
+++.||||||| .|+||++ .+||+|+|++|+|||+|+++.|.. ++|++.+..+.+.+++... .+.
T Consensus 4 ~~~~aiIlA~G--~g~Rl~~---~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~------~~~ 72 (456)
T 2v0h_A 4 KALSAVILAAG--KGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE------QVN 72 (456)
T ss_dssp CCEEEEEECCC--CCGGGCS---SSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC------CCE
T ss_pred CcceEEEECCC--CCcccCC---CCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC------CcE
Confidence 56899999999 9999987 789999999999999999999865 6666665545577766531 244
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeC
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~ 159 (379)
++.++...|++++++.+++++.. .+++++++||+++ +.+++++++.|.+ +++++++.+.. ++..|+.+..+
T Consensus 73 ~v~~~~~~g~~~~~~~~~~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~--~~~~~g~v~~~- 145 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQAAPFFKD--NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD--NPTGYGRIIRE- 145 (456)
T ss_dssp EEECSCCCCHHHHHHHHGGGCCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS--SCTTSCEEEEE-
T ss_pred EEeCCCCCCcHHHHHHHHHhcCC--CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC--CCCccceEEEc-
Confidence 55566788999999999988853 2579999999976 6789999998865 56777776653 56778888776
Q ss_pred CCCcEEEeeecCCC----cccceeeeeEEEeCHhh-HHHhhccccccccchhhhhcchhhhhhhhccccccccccccccc
Q 016989 160 DTNELLHYTEKPET----FVSDLINCGVYVFTPDI-FNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (379)
Q Consensus 160 ~~~~v~~~~ekp~~----~~~~~~~~Giy~~~~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~ 234 (379)
++++..+.|||.. ....+.++|+|+|+++. ++.+........++++ + + .++
T Consensus 146 -~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~---------------------~-~-~d~ 201 (456)
T 2v0h_A 146 -NGNVVAIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEY---------------------Y-L-TDL 201 (456)
T ss_dssp -TTEEEEEECTTTCCHHHHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCC---------------------C-G-GGH
T ss_pred -CCcEEEEEECCCCChhHhcCcEEEEEEEEEEHHHHHHHHHHhccccccccE---------------------E-H-HHH
Confidence 6799999998652 23578899999999875 5666543321111111 1 1 566
Q ss_pred cccccC-CceEEEEEcccch--hhcCCccchhhcchHHHHhhhh--cCCcc--cc--------------CCCCCCCeEEe
Q 016989 235 LSPLAG-KKQLYTYETMDFW--EQIKTPGMSLKCSGLYLAQFRL--TSPNL--LA--------------SGDGTKNATII 293 (379)
Q Consensus 235 l~~l~~-~~~v~~~~~~~~w--~~i~t~~d~~~a~~~~l~~~~~--~~~~~--~~--------------~~~~~~~~~i~ 293 (379)
++.+.. +.++.++..+++| .+++||+||.++++++..+... ..+.. .. ...+.+++.|.
T Consensus 202 ~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~ 281 (456)
T 2v0h_A 202 IALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIE 281 (456)
T ss_dssp HHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEE
T ss_pred HHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEc
Confidence 666654 4689999987654 5889999999998766543210 00000 00 00011233333
Q ss_pred cCeEECCCcEECCCCCCCcEEeceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECCCceeccc
Q 016989 294 GDVYVHPSAKIHPTAKENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLPNKTLNVS 372 (379)
Q Consensus 294 ~~~~i~~~~~i~~~~~~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~i~~~ 372 (379)
+++.||+++.|+ +++.|.+++||++|.|+++|.|.+ ++||++|.|++++.|. +++||+++.||++
T Consensus 282 ~~~~Ig~~~~I~----~~~~i~~~~ig~~~~I~~~~~i~~----------~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~ 347 (456)
T 2v0h_A 282 GNVKLGDRVKIG----TGCVLKNVVIGNDVEIKPYSVLED----------SIVGEKAAIGPFSRLRPGAELAAETHVGNF 347 (456)
T ss_dssp EEEEECTTCEEC----TTCEEEEEEECTTCEECSSCEEEE----------EEECTTCEECSSEEECTTCEECTTCEEEEE
T ss_pred CCcEECCCCEEC----CCCEEEeEEEeCCCEEcCCeEEcc----------CcCCCCcEECCccEECCCCEECCCCEECCC
Confidence 333333333333 344566666677777766666655 7777777777777775 6677777776665
Q ss_pred c
Q 016989 373 V 373 (379)
Q Consensus 373 ~ 373 (379)
+
T Consensus 348 ~ 348 (456)
T 2v0h_A 348 V 348 (456)
T ss_dssp E
T ss_pred C
Confidence 5
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=3.6e-35 Score=269.48 Aligned_cols=234 Identities=22% Similarity=0.350 Sum_probs=190.2
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcc---c----
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN---E---- 75 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~---~---- 75 (379)
.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+|+....+ .
T Consensus 2 ~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 79 (281)
T 3juk_A 2 IKKCLFPAAG--YGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGT 79 (281)
T ss_dssp CCEEEEECCS--CCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------C
T ss_pred ceEEEEECCc--CCcccCccccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhcc
Confidence 4799999999 9999999999999999999999999999999976 666666555678888764210 0
Q ss_pred -------------CCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-----hHHHHHHHHhcCCce
Q 016989 76 -------------LRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-----LPEMLDAHRNYGGMG 137 (379)
Q Consensus 76 -------------~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-----l~~~l~~~~~~~~~~ 137 (379)
++.++.++.++...|++++++.+++++.+ ++|++++||++++.+ ++++++.|.+.++ .
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~---~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~ 155 (281)
T 3juk_A 80 NKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGN---EPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-S 155 (281)
T ss_dssp CHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCS---SCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-C
T ss_pred cchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCC---CCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-C
Confidence 34677778788889999999999999864 369999999988777 9999999988777 7
Q ss_pred EEEEEEeCCCCCCceeEEEEeC-CCC--cEEEeeecCC--CcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcch
Q 016989 138 TILVIKVSAESASQFGELVADP-DTN--ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSS 212 (379)
Q Consensus 138 ti~~~~~~~~~~~~~g~v~~d~-~~~--~v~~~~ekp~--~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 212 (379)
++++...+..++.+||.+..++ .++ +|..|.|||. ...++++++|+|+|++++|+.+.+..++ .++++
T Consensus 156 ~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~-~~~e~------ 228 (281)
T 3juk_A 156 IVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPG-KNNEI------ 228 (281)
T ss_dssp EEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCC-GGGSC------
T ss_pred EEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCC-CCCce------
Confidence 7888777656789999988872 046 9999999986 4567899999999999999988764321 11111
Q ss_pred hhhhhhhccccccccccccccccccccCCceEEEEEcccchhhcCCccchhhcchHHHH
Q 016989 213 FEALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYLA 271 (379)
Q Consensus 213 ~~~~~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l~ 271 (379)
. + .++++.+.++.++.+|.++++|.++|||++|.+|+..++.
T Consensus 229 ---------------~-l-~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~ 270 (281)
T 3juk_A 229 ---------------Q-I-TDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYK 270 (281)
T ss_dssp ---------------C-H-HHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHH
T ss_pred ---------------e-H-HHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHh
Confidence 1 1 6777777766799999999999999999999999977764
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=3.9e-34 Score=260.86 Aligned_cols=231 Identities=21% Similarity=0.343 Sum_probs=191.1
Q ss_pred CCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccc-hHHHHHHHHhhcccCCcc
Q 016989 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYE-EREFALYVSSISNELRIP 79 (379)
Q Consensus 6 ~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~-~~~i~~~l~~~~~~~~~~ 79 (379)
.+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.+ |+|++... ...+.+++.. ...++++
T Consensus 22 ~~~m~aiIlAaG--~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~-~~~~~~~ 98 (269)
T 4ecm_A 22 SNAMKGIILAGG--TGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS-GQEFGVS 98 (269)
T ss_dssp --CEEEEEECCS--CCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT-SGGGTCE
T ss_pred ccCcEEEEECCC--CccccccccCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh-ccccCce
Confidence 356899999999 9999999999999999999999999999999975 66666542 3457788764 2356778
Q ss_pred EEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeC
Q 016989 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (379)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~ 159 (379)
+.+..+....|++++++.+++++.. +++++++||+++..++.++++.|.++++++++++.+.. ++..||.+..+
T Consensus 99 i~~~~~~~~~G~~~al~~a~~~~~~---~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~g~v~~d- 172 (269)
T 4ecm_A 99 FTYRVQDKAGGIAQALGLCEDFVGN---DRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD--DPERFGVANIQ- 172 (269)
T ss_dssp EEEEECSSCCCHHHHHHTTHHHHTT---SEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECS--CGGGSEEEEEE-
T ss_pred EEEeeCCccCcHHHHHHHHHHhcCC---CcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECC--CCCCceEEEEc-
Confidence 8887777889999999999998863 47999999999999999999999988888999888764 67889999887
Q ss_pred CCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcccccccccccccccccccc
Q 016989 160 DTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (379)
Q Consensus 160 ~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 239 (379)
+++|..+.|||..+...++++|+|+|++++|+.+.+..+.. +++ +. + .++++.+.
T Consensus 173 -~g~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~-~ge---------------------~~-l-~d~l~~l~ 227 (269)
T 4ecm_A 173 -NRKIIEIEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSA-RGE---------------------LE-I-TDINNWYL 227 (269)
T ss_dssp -TTEEEEEEESCSSCSCSEEEEEEEEECTTHHHHHTSCCBCT-TSC---------------------BC-H-HHHHHHHH
T ss_pred -CCEEEEEEECCCCCCCcEEEEEEEEECHHHHHhhhhcCCCC-CCe---------------------ee-H-HHHHHHHH
Confidence 48999999999877788999999999999998887654321 111 11 1 67777777
Q ss_pred CCceEEEEEcccchhhcCCccchhhcchHHH
Q 016989 240 GKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 240 ~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l 270 (379)
+..++.++..+++|.++|||++|.+|++.++
T Consensus 228 ~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~ 258 (269)
T 4ecm_A 228 KRGVLTYNEMSGWWTDAGTHVSLQRANALAR 258 (269)
T ss_dssp HTTCEEEEECCSCEEECSSHHHHHHHHHHTT
T ss_pred HcCCEEEEEeCCEEEeCCCHHHHHHHHHHHH
Confidence 6668999999999999999999999987654
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=5.3e-33 Score=257.66 Aligned_cols=237 Identities=21% Similarity=0.291 Sum_probs=183.0
Q ss_pred CCCCCCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcc-
Q 016989 1 MGSSEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN- 74 (379)
Q Consensus 1 m~~~~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~- 74 (379)
|.++|++.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+|+.....
T Consensus 1 ~~~~~~~~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l 78 (302)
T 2e3d_A 1 MAAINTKVKKAVIPVAG--LGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFEL 78 (302)
T ss_dssp ----CCSCCEEEEECCS--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHH
T ss_pred CcchhhcccEEEEECCc--CcccCCccccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhh
Confidence 77788888999999999 9999999999999999999999999999999865 666666555668888764110
Q ss_pred --------------------cCCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeec-----C---ChHHH
Q 016989 75 --------------------ELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS-----F---PLPEM 126 (379)
Q Consensus 75 --------------------~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~-----~---dl~~~ 126 (379)
..+.++.++.+....|++++++.+++++.+ ++|++++||++++ . +++++
T Consensus 79 ~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~~~~~~l~~l 155 (302)
T 2e3d_A 79 EAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGD---EPVAVILPDVILDEYESDLSQDNLAEM 155 (302)
T ss_dssp HHHHC----CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCS---SCEEEECTTEEECTTSSCTTTSTHHHH
T ss_pred hhhhhhccchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCC---CcEEEEcCCccccCccccchHHHHHHH
Confidence 135667777777889999999999998853 3699999999996 2 79999
Q ss_pred HHHHHhcCCceEEEEEEeCCCCCCceeEEEEeC---CCC---cEEEeeecCC--CcccceeeeeEEEeCHhhHHHhhccc
Q 016989 127 LDAHRNYGGMGTILVIKVSAESASQFGELVADP---DTN---ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVS 198 (379)
Q Consensus 127 l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~---~~~---~v~~~~ekp~--~~~~~~~~~Giy~~~~~~l~~l~~~~ 198 (379)
++.|.+.++ .++++.+. .+++.||.+..+. +++ +|..|.|||. ...+.+.++|+|+|++++|+.+.+..
T Consensus 156 ~~~~~~~~~-~~i~~~~~--~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~ 232 (302)
T 2e3d_A 156 IRRFDETGH-SQIMVEPV--ADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTP 232 (302)
T ss_dssp HHHHHHHCC-EEEEEEEC--SCGGGSEEEECTTCCCCTTCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCC
T ss_pred HHHHHhcCC-cEEEEEEc--cCCCCccEEEecccccCCCCceeEEEEEECCCCCccccceEEEEEEEECHHHHHHHHhhC
Confidence 999988776 77777765 4678899887631 256 8999999985 44577999999999999998887643
Q ss_pred cccccchhhhhcchhhhhhhhccccccccccccccccccccCCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 199 SQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
++. ++++ + + .++++.++++.++.++.++++|.|+|||++|.+++..+
T Consensus 233 ~~~-~~~~---------------------~-l-~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~ 279 (302)
T 2e3d_A 233 PGA-GDEI---------------------Q-L-TDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEY 279 (302)
T ss_dssp C-----CC---------------------C-H-HHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHH
T ss_pred CCC-CCce---------------------e-h-HHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHH
Confidence 321 1111 1 1 46666665545999999999999999999999998443
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.98 E-value=5e-32 Score=250.51 Aligned_cols=234 Identities=20% Similarity=0.275 Sum_probs=164.6
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhc--------
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSIS-------- 73 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~-------- 73 (379)
+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+++....
T Consensus 13 ~~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 13 PLRKAVFPVAG--LGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCCEEEEEECC--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHT
T ss_pred CccEEEEECCC--CccccCccccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhh
Confidence 46899999999 9999999999999999999999999999999875 66666655556888775310
Q ss_pred -----------ccCCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeec---CChHHHHHHHHhcCCceEE
Q 016989 74 -----------NELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS---FPLPEMLDAHRNYGGMGTI 139 (379)
Q Consensus 74 -----------~~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~---~dl~~~l~~~~~~~~~~ti 139 (379)
...+.++.++.++...|++++++.+++++.+ ++|++++||++++ .+++++++.|.+.++ .++
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i 166 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGD---EPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLI 166 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCS---SCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEE
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCC---CcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEE
Confidence 0034667777777889999999999998853 4699999999996 579999999987765 566
Q ss_pred EEEEeCCCCCCceeEEEEeC-CCC--cEEEeeecCC--CcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhh
Q 016989 140 LVIKVSAESASQFGELVADP-DTN--ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFE 214 (379)
Q Consensus 140 ~~~~~~~~~~~~~g~v~~d~-~~~--~v~~~~ekp~--~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 214 (379)
++.+.+..++..||++..++ +++ +|..|.|||. ...+.+.++|+|+|++++|+.+.+..++. +++
T Consensus 167 ~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~-~~~--------- 236 (297)
T 2ux8_A 167 CAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGA-GGE--------- 236 (297)
T ss_dssp EEC-----------CCCCCCBCSSEEEC--------------CCCEEEEEEECTHHHHHHHHTC----------------
T ss_pred EEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCCCccEEEEEEEEECHHHHHHHHhhCCCC-CCe---------
Confidence 66655434567899876542 144 8999999984 44567899999999999998887543221 111
Q ss_pred hhhhhccccccccccccccccccccCCceEEEEEcccchhhcCCccchhhcchHHH
Q 016989 215 ALQSATRNLTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 215 ~~~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l 270 (379)
++ + .++++.++++.++.++.++++|.|+|||++|.+++..++
T Consensus 237 ------------~~-l-~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~ 278 (297)
T 2ux8_A 237 ------------IQ-L-TDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVA 278 (297)
T ss_dssp ---------------C-CTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHH
T ss_pred ------------eE-H-HHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHH
Confidence 11 1 577777776679999999999999999999999985554
No 12
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.98 E-value=1.4e-31 Score=246.34 Aligned_cols=230 Identities=20% Similarity=0.309 Sum_probs=183.2
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEc-ccchHHHHHHHHhhcccCCccEE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVG-FYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~-~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
+|+||||||| .||||+|+|...||+|+|++|+|||+|+++.+.. |+|++ .+..+.+++++++. ..+++++.
T Consensus 2 ~~~aIILAgG--~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i~ 78 (293)
T 1fxo_A 2 KRKGIILAGG--SGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDG-SNWGLDLQ 78 (293)
T ss_dssp CEEEEEECCC--CCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEE
T ss_pred CceEEEECCC--CCCcCccccCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcc-cccCceEE
Confidence 4799999999 9999999999999999999999999999999875 55444 54555688888753 34677887
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCC
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~ 160 (379)
+..++.+.|++++++.+.+++.+ ++++++.||+++ +.++.++++.|.+.+.+++++..++ .++..||++..|+
T Consensus 79 ~~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~~g~v~~d~- 152 (293)
T 1fxo_A 79 YAVQPSPDGLAQAFLIGESFIGN---DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV--LDPERYGVVEFDQ- 152 (293)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTT---SEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEEC--SCGGGSEEEEECT-
T ss_pred EeeCCCCCCHHHHHHHHHHHhCC---CCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEEC--CCcccCcEEEECC-
Confidence 87777889999999999998863 368888899998 7789999999977667778877776 3677899998884
Q ss_pred CCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccccccccC
Q 016989 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAG 240 (379)
Q Consensus 161 ~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~ 240 (379)
+++|..|.|||..+.+++.++|+|+|++++++.+....++..+ ++ .+ .|+++.+.+
T Consensus 153 ~g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~g-e~-------------------~~----td~~~~~l~ 208 (293)
T 1fxo_A 153 GGKAISLEEKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRG-EL-------------------EI----TDVNRAYLE 208 (293)
T ss_dssp TSCEEEEEESCSSCSSSEEEEEEEEECTTHHHHHHHCCCCTTS-SC-------------------CH----HHHHHHHHH
T ss_pred CCcEEEEEECCCCCCCCeEEEEEEEEcHHHHHHHHhcCcccCC-ce-------------------eH----HHHHHHHHh
Confidence 7899999999977778899999999999999888754332111 11 01 456665655
Q ss_pred CceEEEEEcc-cc-hhhcCCccchhhcchHHH
Q 016989 241 KKQLYTYETM-DF-WEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 241 ~~~v~~~~~~-~~-w~~i~t~~d~~~a~~~~l 270 (379)
..++.++... ++ |.|+|||+||.+|+.++.
T Consensus 209 ~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 209 RGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp TTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 5677777764 65 999999999999987654
No 13
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=4e-31 Score=243.37 Aligned_cols=229 Identities=19% Similarity=0.303 Sum_probs=181.0
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEE-cccchHHHHHHHHhhcccCCccEEE
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLV-GFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~-~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
|++|||||| .||||+|+|...||+|+|++|+|||+|+++.+.. |+|+ +.+..+.+++++++. ..+++++.+
T Consensus 4 m~aIILAgG--~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g-~~~g~~i~~ 80 (295)
T 1lvw_A 4 MKGIVLAGG--SGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDG-SQFGVRFSY 80 (295)
T ss_dssp CEEEEECCC--CCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTSEEEE
T ss_pred eEEEEECCC--CCCccccccCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhc-cccCceEEE
Confidence 799999999 9999999999999999999999999999999875 5554 445555688888753 346777777
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCCC
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDT 161 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~ 161 (379)
+.++.+.|++++++.+.+++.+ ++++++.||+++ +.++.++++.|.+.+..+++++.++. ++..||++..|+ +
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~--dp~~~g~v~~d~-~ 154 (295)
T 1lvw_A 81 RVQEEPRGIADAFIVGKDFIGD---SKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVR--DPRPFGVVEFDS-E 154 (295)
T ss_dssp EECSSCCCGGGHHHHTHHHHTT---SCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECS--CCTTSEEEEECT-T
T ss_pred eeCCCCCChHHHHHHHHHHhCC---CcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECC--CcccCCEEEECC-C
Confidence 7777788999999999998863 347777799998 77899999999776667788777763 577899999884 7
Q ss_pred CcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccccccccCC
Q 016989 162 NELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGK 241 (379)
Q Consensus 162 ~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~ 241 (379)
++|..|.|||..+.+++.++|+|+|++++++.+....++.. +++ ++ +++++.+.+.
T Consensus 155 g~v~~~~ekp~~~~s~~~~~Giy~f~~~~l~~~~~~~~~~~-ge~-------------------~~----td~~~~~l~~ 210 (295)
T 1lvw_A 155 GRVISIEEKPSRPKSNYVVPGLYFYDNQVVEIARRIEPSDR-GEL-------------------EI----TSVNEEYLRM 210 (295)
T ss_dssp SBEEEEEESCSSCSCSEECCSEEEECTTHHHHHHHCCCCTT-SCC-------------------CH----HHHHHHHHHT
T ss_pred CcEEEEEECCCCCCCCEEEEEeEEEcHHHHHHHHhcCCccc-Cce-------------------eH----HHHHHHHHHc
Confidence 89999999997667789999999999999888765433211 111 11 4555555555
Q ss_pred ceEEEEEcc-cc-hhhcCCccchhhcchHHH
Q 016989 242 KQLYTYETM-DF-WEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 242 ~~v~~~~~~-~~-w~~i~t~~d~~~a~~~~l 270 (379)
.++.++... ++ |.|+|||+||.+|+.++.
T Consensus 211 g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 211 GKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp TCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 566666664 64 999999999999987654
No 14
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=1.9e-31 Score=245.72 Aligned_cols=229 Identities=20% Similarity=0.277 Sum_probs=181.8
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEc-ccchHHHHHHHHhhcccCCccEEE
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVG-FYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~-~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
|++|||||| .||||+|+|...||+|+|++|+|||+|+++.+.. |+|++ .+..+.+++++.+. ..+++++.+
T Consensus 4 m~aIILAgG--~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i~~ 80 (296)
T 1mc3_A 4 MKGIILAGG--SGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDG-SEFGIQLEY 80 (296)
T ss_dssp CEEEEECCC--CCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEEE
T ss_pred cEEEEECCC--CCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcc-cccCceEEE
Confidence 689999999 9999999999999999999999999999999875 55544 45555688888752 346777777
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCCC
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDT 161 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~ 161 (379)
+.++.+.|++++++.+.+++.+ ++++++.||+++ +.++.++++.|.+.+.+++++..+.. ++..||++..|+ +
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~--dp~~yg~v~~d~-~ 154 (296)
T 1mc3_A 81 AEQPSPDGLAQAFIIGETFLNG---EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVM--DPERFGVVEFDD-N 154 (296)
T ss_dssp EECSSCCCSTHHHHHTHHHHTT---SCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECS--CCSSSBBCEEET-T
T ss_pred eccCCCCCHHHHHHHHHHHhCC---CCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECC--CcccCCEEEECC-C
Confidence 7777789999999999998863 347777799998 77899999999766667788777763 577899998884 7
Q ss_pred CcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccccccccCC
Q 016989 162 NELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGK 241 (379)
Q Consensus 162 ~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~ 241 (379)
++|..|.|||..+.+++.++|+|+|++++++.+....++.. +++ ++ +++++.+.+.
T Consensus 155 g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~-ge~-------------------~~----td~~~~~l~~ 210 (296)
T 1mc3_A 155 FRAISLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSER-GEL-------------------EI----TSINQMYLEA 210 (296)
T ss_dssp EEEEECCBSCSSCSCSEEEEEEEECCTHHHHHHHSCCCCSS-SSC-------------------CH----HHHHHHHHHT
T ss_pred CcEEEEEECCCCCCCCEEEEEEEEEcHHHHHHHHhcCcccc-CCc-------------------cH----HHHHHHHHhc
Confidence 89999999997777889999999999999988876543211 111 11 4555555555
Q ss_pred ceEEEEEcc-cc-hhhcCCccchhhcchHHH
Q 016989 242 KQLYTYETM-DF-WEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 242 ~~v~~~~~~-~~-w~~i~t~~d~~~a~~~~l 270 (379)
.++.++... ++ |.|+|||++|.+++.++.
T Consensus 211 g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 211 GNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp TCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 567777764 65 999999999999987664
No 15
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.97 E-value=9.8e-31 Score=237.01 Aligned_cols=224 Identities=22% Similarity=0.407 Sum_probs=166.2
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcc---cCCc-
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN---ELRI- 78 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~---~~~~- 78 (379)
.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.+ |+|++.+..+.+++++..... .+.+
T Consensus 2 ~~~avIlAaG--~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (259)
T 1tzf_A 2 ASKAVILAGG--LGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFH 79 (259)
T ss_dssp CCEEEEEECS--CC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEE
T ss_pred CcEEEEECCC--CcccCCCccCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhccccccccccc
Confidence 4789999999 9999999999999999999999999999999875 666665555668888875321 1111
Q ss_pred ----------------cEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCChHHHHHHHHhcCCceEEEEE
Q 016989 79 ----------------PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLDAHRNYGGMGTILVI 142 (379)
Q Consensus 79 ----------------~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~dl~~~l~~~~~~~~~~ti~~~ 142 (379)
.+.+..+....|++++++.+++++..+ +++++++||++++.++.++++.|.+.++++++...
T Consensus 80 ~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~--~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 80 MAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp GGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTS--SCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCC--CcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 022233445789999999999988432 46999999998899999999999887777766543
Q ss_pred EeCCCCCCceeEEEEeCCCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccc
Q 016989 143 KVSAESASQFGELVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (379)
Q Consensus 143 ~~~~~~~~~~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (379)
+ .++.||.+..+ +++|..|.|||... ..+.++|+|+|++++|+.+...
T Consensus 158 ~----~~~~~g~v~~~--~g~v~~~~ekp~~~-~~~~~~Giy~~~~~~l~~l~~~------------------------- 205 (259)
T 1tzf_A 158 F----PPGRFGALDIQ--AGQVRSFQEKPKGD-GAMINGGFFVLNPSVIDLIDND------------------------- 205 (259)
T ss_dssp C----CCCCSEEEEEE--TTEEEEEEESCSCC-SCCEECCCEEECGGGGGGCCST-------------------------
T ss_pred c----CCCCccEEEEc--CCEEEEEEecCCCC-CceEEEEEEEeCHHHHHhhccc-------------------------
Confidence 2 46789988887 68999999998653 5689999999999998766321
Q ss_pred cccccccccccccccccCCceEEEEEcccchhhcCCccchhhcchHHHH
Q 016989 223 LTTDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYLA 271 (379)
Q Consensus 223 ~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l~ 271 (379)
+.++. .++++.+.++.++.++..+++|.++||++||.+++..+..
T Consensus 206 -~~~~~---~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 206 -ATTWE---QEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp -TCCTT---THHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHT
T ss_pred -ccccH---HHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhc
Confidence 01111 4566666655689999999999999999999999876653
No 16
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=3.1e-31 Score=247.88 Aligned_cols=235 Identities=19% Similarity=0.259 Sum_probs=180.5
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcc-------
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISN------- 74 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~------- 74 (379)
+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+++.....
T Consensus 11 ~~~~aVIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 11 AVKTVVVPAAG--LGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLME 88 (323)
T ss_dssp -CCEEEEECCC--CCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHH
T ss_pred cceEEEEECCC--CccccCccccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhc
Confidence 45899999999 9999999999999999999999999999999865 666655544557777643100
Q ss_pred -------------cCCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeec--CChHHHHHHHHhcCCceEE
Q 016989 75 -------------ELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS--FPLPEMLDAHRNYGGMGTI 139 (379)
Q Consensus 75 -------------~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~--~dl~~~l~~~~~~~~~~ti 139 (379)
..+.++.++.++...|++++++.+++++..+ ++.|++++||++++ .++..+++.|.+.++ .++
T Consensus 89 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~-~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i 166 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDD-EDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVL 166 (323)
T ss_dssp TTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSS-CCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEE
T ss_pred cchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCC-CCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEE
Confidence 0245666666777889999999999888532 34599999999996 679999999987665 567
Q ss_pred EEEEeCCCCCCceeEEEEe----CCCC--cEEEeeecCC--CcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcc
Q 016989 140 LVIKVSAESASQFGELVAD----PDTN--ELLHYTEKPE--TFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVS 211 (379)
Q Consensus 140 ~~~~~~~~~~~~~g~v~~d----~~~~--~v~~~~ekp~--~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~ 211 (379)
++.+.+..++..||.+..+ + ++ +|..|.|||. ...+.+.++|+|+|++++|+.+....++. ++++
T Consensus 167 ~~~~~~~~~~~~yg~v~~d~~~~~-~~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~-~ge~----- 239 (323)
T 2pa4_A 167 CAVEVSEADVSKYGIFEIEADTKD-SDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGA-GGEL----- 239 (323)
T ss_dssp EEEECCGGGGGGSEEEEEEECCSS-TTEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCG-GGCC-----
T ss_pred EEEEecccccCCccEEEeCCcccC-CCceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCC-CCeE-----
Confidence 7666644567899988876 3 43 8999999984 44567899999999999998887543221 1111
Q ss_pred hhhhhhhhccccccccccccccccccccCC-ceEEEEEcccchhhcCCccchhhcchHHH
Q 016989 212 SFEALQSATRNLTTDFVRLDQDILSPLAGK-KQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~-~~v~~~~~~~~w~~i~t~~d~~~a~~~~l 270 (379)
+ + .++++.++++ .++.++.++++|.|||||++|.+++..++
T Consensus 240 ----------------~-l-~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~ 281 (323)
T 2pa4_A 240 ----------------Q-L-TDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFG 281 (323)
T ss_dssp ----------------C-H-HHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHH
T ss_pred ----------------e-H-HHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHh
Confidence 1 1 5677766654 78999999999999999999999985544
No 17
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.97 E-value=8.5e-31 Score=242.56 Aligned_cols=236 Identities=19% Similarity=0.223 Sum_probs=178.5
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCcee--CCcchhHHHHHhcCc-----EEEEcccc-hHHHHHHHHhhcccCCc
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL--GGQPMVHHPISACKR-----IYLVGFYE-EREFALYVSSISNELRI 78 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi--~g~pli~~~i~~l~~-----iiv~~~~~-~~~i~~~l~~~~~~~~~ 78 (379)
|++++|||||| .|+||+| ||+|+|+ +|+|||+|+++.+.. |+|++.+. .+.+.+|+.+. ..++.
T Consensus 4 m~~~~vIlAaG--~g~R~~~-----~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~-~~~~~ 75 (303)
T 3pnn_A 4 MKPTLFVLAAG--MGSRYGS-----LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTK-YEGRI 75 (303)
T ss_dssp CCCEEEEECTT--CBCTTSS-----BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHH-HTTTS
T ss_pred CceEEEEECCC--CcccCCC-----CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHH-hccCC
Confidence 46899999999 9999999 8999999 699999999998865 65555554 46788888763 23456
Q ss_pred cEEEecCC---------------CCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-hHHHHHHHHh---cCCceEE
Q 016989 79 PVRYLRED---------------KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRN---YGGMGTI 139 (379)
Q Consensus 79 ~i~~~~~~---------------~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-l~~~l~~~~~---~~~~~ti 139 (379)
++.++.++ .++||+++++.++++++ ++|+|++||++++.+ ++++++.|.+ +++++++
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~----~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v 151 (303)
T 3pnn_A 76 PVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR----EPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCM 151 (303)
T ss_dssp CEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC----SCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEE
T ss_pred cEEEEecccccccccccccccccccCCcHHHHHHHHHhcC----CCEEEEECCeecCHHHHHHHHHHHHHhccccCceEE
Confidence 67776555 57899999999999884 359999999998665 9999999975 5677888
Q ss_pred EEEEeCCCCC-Cce-----eEEEEeCCCCcEEEeeecCCC-------------------cccceeeeeEEEeCHhhHHHh
Q 016989 140 LVIKVSAESA-SQF-----GELVADPDTNELLHYTEKPET-------------------FVSDLINCGVYVFTPDIFNAI 194 (379)
Q Consensus 140 ~~~~~~~~~~-~~~-----g~v~~d~~~~~v~~~~ekp~~-------------------~~~~~~~~Giy~~~~~~l~~l 194 (379)
++.+.. ++ +.| |.+..|+ +++|+.|.|||.. +.++++++|+|+|++++|+.+
T Consensus 152 ~~~~~~--~~~~~~g~~~~G~v~~d~-~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l 228 (303)
T 3pnn_A 152 VGYRVG--NTLSESGGVSRGVCQVDE-KHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFDYS 228 (303)
T ss_dssp EEEEGG--GSCBTTBCEEEEEEEECT-TSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHHHH
T ss_pred EEEECC--CccCccCceeeeeEeeCC-CCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHHHHH
Confidence 888774 34 455 6777874 7899999999853 257899999999999999888
Q ss_pred hccccccccchhhhhcchhhhhhhhccccccccccccccccccccCCc--eEEEEEcccchhhcCCccchhhcchHHHHh
Q 016989 195 QGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLAGKK--QLYTYETMDFWEQIKTPGMSLKCSGLYLAQ 272 (379)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~~--~v~~~~~~~~w~~i~t~~d~~~a~~~~l~~ 272 (379)
.+....- +.........+++ + +++++.+++.. ++.+|.++++|.++|||++|.+|++.+...
T Consensus 229 ~~~~~~~--------------l~~~~~~~~~e~~-l-~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~~ 292 (303)
T 3pnn_A 229 EELFINF--------------LNAHGQEPKSEFF-I-PFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLREL 292 (303)
T ss_dssp HHHHHHH--------------HHHHTTCSSCCCC-H-HHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHH--------------HHhcCCCcCCcEE-h-HHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHHH
Confidence 6421000 0000000111222 1 67888776654 899999999999999999999998777544
Q ss_pred h
Q 016989 273 F 273 (379)
Q Consensus 273 ~ 273 (379)
+
T Consensus 293 ~ 293 (303)
T 3pnn_A 293 T 293 (303)
T ss_dssp H
T ss_pred H
Confidence 3
No 18
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.97 E-value=3e-30 Score=232.95 Aligned_cols=220 Identities=16% Similarity=0.186 Sum_probs=161.2
Q ss_pred EEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcccCCcc--EEE
Q 016989 11 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIP--VRY 82 (379)
Q Consensus 11 aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~~~~~~--i~~ 82 (379)
+|||||| .||||+|+|..+||+|+||+|||||+|+++.+.. +++++.+..+ +.+++.+....++.+ ..+
T Consensus 2 ~iIlAaG--~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (255)
T 4evw_A 2 IVIPMAG--MSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYIA 78 (255)
T ss_dssp EEEECCS--CCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEE
T ss_pred EEEEcCC--CCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCCCCceEE
Confidence 7999999 9999999999999999999999999999999864 5544444333 455554432233322 134
Q ss_pred ecCCCCCChHHHHHHHHHhhcc---CCCCeEEEEcCCeee-cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEe
Q 016989 83 LREDKPHGSAGALYNFRDLIME---DNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVAD 158 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~---~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d 158 (379)
+.++.+.||++|++.+++.+.. +..++|+|++||+++ +.++.++ ..++++++++.+.. ++ .||++..+
T Consensus 79 ~~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~--~p-~yG~v~~d 150 (255)
T 4evw_A 79 ELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG--GD-NWSFAKPE 150 (255)
T ss_dssp EESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--SS-CSCEEEES
T ss_pred EeCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--CC-ceeEEEEC
Confidence 5567889999999999999830 112469999999998 6777664 24567888888874 33 99999998
Q ss_pred CCCC--cEEEeeecCCCcccceeeeeEEEeCHh--hHHHhhcccc-ccc---cchhhhhcchhhhhhhhccccccccccc
Q 016989 159 PDTN--ELLHYTEKPETFVSDLINCGVYVFTPD--IFNAIQGVSS-QRK---DRENLRRVSSFEALQSATRNLTTDFVRL 230 (379)
Q Consensus 159 ~~~~--~v~~~~ekp~~~~~~~~~~Giy~~~~~--~l~~l~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (379)
+ ++ +|..|.||+ ..++++++|+|+|++. +++.+.+... ... ++| |+.
T Consensus 151 ~-~g~~~V~~i~EK~--~~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~gE---------------------~~l- 205 (255)
T 4evw_A 151 H-AGSTKVIQTAEKN--PISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERGE---------------------LYI- 205 (255)
T ss_dssp S-TTCCBEEEEESSS--CSSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCSC---------------------CCS-
T ss_pred C-CCCeEEEEEEecc--CccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCCe---------------------Eeh-
Confidence 5 67 999999993 3578999999999974 3344433211 110 222 221
Q ss_pred cccccccccC-CceEEEEEcc-cchhhcCCccchhhcch
Q 016989 231 DQDILSPLAG-KKQLYTYETM-DFWEQIKTPGMSLKCSG 267 (379)
Q Consensus 231 ~~d~l~~l~~-~~~v~~~~~~-~~w~~i~t~~d~~~a~~ 267 (379)
+|+++.+++ +.++.++.++ ++|.++|||++|.++.+
T Consensus 206 -td~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 206 -APLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp -TTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHH
T ss_pred -HHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHh
Confidence 688887764 4689999985 89999999999988753
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=1.3e-29 Score=235.28 Aligned_cols=243 Identities=16% Similarity=0.202 Sum_probs=150.4
Q ss_pred CCCceEEEEEecCCCCCCccCCCCC-CCCCCCcee-CCcchhHHHHHhcCc----EEEEcccc-hHHHHHHHHhhcccCC
Q 016989 5 EDDKVVAVIMVGGPTKGTRFRPLSL-NIPKPLFPL-GGQPMVHHPISACKR----IYLVGFYE-EREFALYVSSISNELR 77 (379)
Q Consensus 5 ~~~~~~aVIla~G~~~gtRl~~lt~-~~pK~llpi-~g~pli~~~i~~l~~----iiv~~~~~-~~~i~~~l~~~~~~~~ 77 (379)
|.++|+||||||| .|+||+|+|. ..||+|+|+ +|+|||+|+++.+.+ |+|++... ...+.+++... ++
T Consensus 1 m~~~~~avIlAgG--~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~~~~i~vv~~~~~~~~i~~~~~~~---~~ 75 (308)
T 2qh5_A 1 MSLKIKNILLSGG--SGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASLVDETLIVCNEKHYFLALEEIKNE---IK 75 (308)
T ss_dssp --CCEEEEEECC---------------CCGGGCTTBTTBCHHHHHHHHHHTTCSEEEEEEEGGGHHHHHHHTTTT---CS
T ss_pred CCCccEEEEEcCC--CCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHccCCCEEEEEChhHHHHHHHHHHHh---hC
Confidence 3455899999999 9999999997 899999999 599999999999865 66655543 23567777541 45
Q ss_pred c-cEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-cCC-hHHHHHH---HHhcCCceEEEEEEeCCCCCCc
Q 016989 78 I-PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFP-LPEMLDA---HRNYGGMGTILVIKVSAESASQ 151 (379)
Q Consensus 78 ~-~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~~d-l~~~l~~---~~~~~~~~ti~~~~~~~~~~~~ 151 (379)
+ ++.++.++...|++++++.+...+..+ +.|++++||+++ +.+ +.++++. |.+.++++|+++.+. ..+..
T Consensus 76 ~~~~~~i~~~~~~gt~~al~~a~~~l~~~--~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~--~~~~~ 151 (308)
T 2qh5_A 76 NKSVGFLLESLSKNTANAIALSALMSDKE--DLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSID--KPNTE 151 (308)
T ss_dssp SCEEEEEEESSCCCHHHHHHHHHHTSCTT--SEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECS--SCCTT
T ss_pred CCccEEEeCCCCCChHHHHHHHHHHhCCC--CeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecC--CCCCC
Confidence 5 566666777889999999999888422 359999999999 666 9999987 666777788887765 34578
Q ss_pred eeEEEEeCCCCcEEEeeecCCCcc--------cceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhhhhhccc
Q 016989 152 FGELVADPDTNELLHYTEKPETFV--------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (379)
Q Consensus 152 ~g~v~~d~~~~~v~~~~ekp~~~~--------~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (379)
||++..++ +++|..|.|||.... ..++++|+|+|++++| +.+.+..+... +.+......
T Consensus 152 ~g~i~~d~-~~~V~~~~Ekp~~~~~~~~~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~-----------~~~~~~~~~ 219 (308)
T 2qh5_A 152 FGYIESPN-GLDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTIL-----------KGCERAFES 219 (308)
T ss_dssp SEEEECSS-SSBCSEEEESCCHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHH-----------HHHHHHGGG
T ss_pred ceEEEECC-CCEEEEEEECCChHHHHHHhhcCCeEEEeEEEEEEHHHHHHHHHHhChHHH-----------HHHHHHhhc
Confidence 99988763 689999999986431 4689999999999874 66664432210 000000000
Q ss_pred cc------cccccccccccc--------c-cc-CCceEEEEEcccchhhcCCccchhhcchH
Q 016989 223 LT------TDFVRLDQDILS--------P-LA-GKKQLYTYETMDFWEQIKTPGMSLKCSGL 268 (379)
Q Consensus 223 ~~------~~~~~l~~d~l~--------~-l~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~ 268 (379)
.. .++.++..++++ . +. ++.++.+++.+++|.++|||++|.+++..
T Consensus 220 ~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~ 281 (308)
T 2qh5_A 220 LENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAAN 281 (308)
T ss_dssp CEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC-------------
T ss_pred cccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhc
Confidence 00 111111123332 1 33 45789999999999999999999988643
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.95 E-value=6.6e-27 Score=210.85 Aligned_cols=221 Identities=14% Similarity=0.149 Sum_probs=168.1
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEEE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
++.||||||| .|||| | ||+|+|++|||||+|+++.+.. |+|++. . +.+.+++.. +++++.+
T Consensus 2 ~~~aiIlA~G--~stRl-p-----~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~-~-~~i~~~~~~----~g~~v~~ 67 (252)
T 3oam_A 2 SFTVVIPARY--QSTRL-P-----GKPLADIGGKPMIQWVYEQAMQAGADRVIIATD-D-ERVEQAVQA----FGGVVCM 67 (252)
T ss_dssp CEEEEEECCC--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES-C-HHHHHHHHH----TTCEEEE
T ss_pred ceEEEEecCc--CCCCC-C-----CcceeeECCEEHHHHHHHHHHhCCCCeEEEECC-H-HHHHHHHHH----cCCEEEE
Confidence 4799999999 99999 5 8999999999999999999975 666664 2 457777763 5677777
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCce-----eEE
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQF-----GEL 155 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~-----g~v 155 (379)
..++...|++. +..+.+.+.....+.+++++||.++ +.++.++++.|.+.++++++++.+.. ++..| +.+
T Consensus 68 ~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~~~~~p~~g~v 144 (252)
T 3oam_A 68 TSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEAEVFNPNAVKV 144 (252)
T ss_dssp CCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHHHHTCTTSCEE
T ss_pred cCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHHHhhCCCceEE
Confidence 77777889987 5566666631123579999999977 67899999999888888999988874 45556 888
Q ss_pred EEeCCCCcEEEeeecCCC-------------cccceeeeeEEEeCHhhHHHhhccccccc-cchhhhhcchhhhhhhhcc
Q 016989 156 VADPDTNELLHYTEKPET-------------FVSDLINCGVYVFTPDIFNAIQGVSSQRK-DRENLRRVSSFEALQSATR 221 (379)
Q Consensus 156 ~~d~~~~~v~~~~ekp~~-------------~~~~~~~~Giy~~~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 221 (379)
..|+ +|+++.|.++|-. +..++.++|+|+|++++|+.+....++.. +.|.
T Consensus 145 v~d~-~g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~--------------- 208 (252)
T 3oam_A 145 ITDK-SGYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIEC--------------- 208 (252)
T ss_dssp EECT-TSBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHT---------------
T ss_pred EECC-CCeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccch---------------
Confidence 8884 7999999988631 23678999999999999988876543221 1110
Q ss_pred ccccccccccccccccccCCceEEEEEcc-cchhhcCCccchhhcchHHHH
Q 016989 222 NLTTDFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLYLA 271 (379)
Q Consensus 222 ~~~~~~~~l~~d~l~~l~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~l~ 271 (379)
-+.+..+..+.+|.++... .+|.+||||+||.++++++..
T Consensus 209 ----------le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~ 249 (252)
T 3oam_A 209 ----------LEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAE 249 (252)
T ss_dssp ----------CTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ----------hHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHh
Confidence 2333344557789998664 468999999999999877643
No 21
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.93 E-value=5.7e-26 Score=212.68 Aligned_cols=230 Identities=17% Similarity=0.265 Sum_probs=159.3
Q ss_pred eEEEEEecCCCCCCccCCCC-CCCCCCCceeCC-cchhHHHHHhcCc------EEEEcccc-hHHHHHHHHhhcccCCcc
Q 016989 9 VVAVIMVGGPTKGTRFRPLS-LNIPKPLFPLGG-QPMVHHPISACKR------IYLVGFYE-EREFALYVSSISNELRIP 79 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt-~~~pK~llpi~g-~pli~~~i~~l~~------iiv~~~~~-~~~i~~~l~~~~~~~~~~ 79 (379)
|++|||||| .||||+|+| ...||+|+|++| +|||+|+++++.. ++|+++.. ...+.+++..... ..
T Consensus 2 m~~VILAgG--~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~~---~~ 76 (336)
T 2x65_A 2 MKALILAGG--SGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELPD---EN 76 (336)
T ss_dssp CEEEEECCC--BCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSCG---GG
T ss_pred eEEEEECCC--CCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhcccc---ce
Confidence 689999999 999999999 689999999999 9999999999854 66665554 3346677654211 23
Q ss_pred EEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeec--CChHHH----HHHHHhcCCceEEEEEEeCCCCCCcee
Q 016989 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCS--FPLPEM----LDAHRNYGGMGTILVIKVSAESASQFG 153 (379)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~--~dl~~~----l~~~~~~~~~~ti~~~~~~~~~~~~~g 153 (379)
+ +.++...||+.++..+...+.. .+.+++++||+++. .++.++ ++.|.+.++.+|+.+.+.. ..+.||
T Consensus 77 i--i~e~~~~gta~ai~~a~~~~~~--~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~--~~~~yG 150 (336)
T 2x65_A 77 I--IAEPMKKNTAPACFIGTKLADD--DEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTR--PETGYG 150 (336)
T ss_dssp E--EEESSCCCHHHHHHHHHTTSCT--TCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCS--CCSSSE
T ss_pred E--EeCCCCCCcHHHHHHHHHhhCC--CCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeeccc--CCCCce
Confidence 3 3456678999999988776532 24699999999993 255444 4446665666777766653 347899
Q ss_pred EEEEeCCC-----CcEEEeeecCCCcc--------cceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhhhhh
Q 016989 154 ELVADPDT-----NELLHYTEKPETFV--------SDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSA 219 (379)
Q Consensus 154 ~v~~d~~~-----~~v~~~~ekp~~~~--------~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
++..++ + ++|..|.|||.... ..++++|+|+|+++.| +.+.+..+... +.+...
T Consensus 151 ~I~~~~-~~~~~~~~V~~f~EKp~~~~a~~~~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~~-----------~~~~~~ 218 (336)
T 2x65_A 151 YIEIGE-ELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIY-----------ENLKDV 218 (336)
T ss_dssp EEEEEE-EEETTEEEEEEEEESCCHHHHHHHHHHTCEEEEEEEEEEEHHHHHHHHHHHCHHHH-----------HHHTTC
T ss_pred EEEECC-ccCCCccEEEEEEECCChHHHHHHHhcCCeEEEeeeEEEEHHHHHHHHHHHCHHHH-----------HHHHHh
Confidence 998763 3 68999999997421 2578999999999876 77765433211 000000
Q ss_pred cccccccccccccccccc---------c-cCCceEEEEEcccchhhcCCccchhhc
Q 016989 220 TRNLTTDFVRLDQDILSP---------L-AGKKQLYTYETMDFWEQIKTPGMSLKC 265 (379)
Q Consensus 220 ~~~~~~~~~~l~~d~l~~---------l-~~~~~v~~~~~~~~w~~i~t~~d~~~a 265 (379)
..... +|. .++++. + .+..++++++.+++|.|+||+++|.++
T Consensus 219 ~~~~e-~~~---~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 219 DPRNF-EEL---KKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp CTTCH-HHH---HHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred hhhhh-hHH---HHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 00000 111 233332 3 345789999999999999999999876
No 22
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.93 E-value=4.8e-26 Score=205.40 Aligned_cols=219 Identities=15% Similarity=0.196 Sum_probs=151.1
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
++|.||||||| .|+||+|+|..+||+|+|++|+|||+|+++.+.. |+|++.+..+.+.++.. .+++.+.
T Consensus 24 ~~~~aiIlAaG--~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~----~~~~~iv 97 (254)
T 1jyk_A 24 IRVKAIILAAG--LGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKE----KYGVRLV 97 (254)
T ss_dssp CCCEEEEEECS--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHH----HHCCEEE
T ss_pred cCceEEEECCC--CcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHH----hCCcEEE
Confidence 36899999999 9999999999999999999999999999999865 66655543334554443 2345554
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceEEEEEEeCCCCC-CceeEEEEeC
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGTILVIKVSAESA-SQFGELVADP 159 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-l~~~l~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~d~ 159 (379)
+..+..+.|++++++.+++.++ ++++++||+++..+ +..++ +.++.+++ ... ++ ..|+++ .++
T Consensus 98 ~~~~~~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~~~~~t~---~~~--~~~~~~~v~-~d~ 162 (254)
T 1jyk_A 98 FNDKYADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TRSTYFSV---YRE--DCTNEWFLV-YGD 162 (254)
T ss_dssp ECTTTTTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CSEEEEEC---EES--SCSSCCEEE-ECT
T ss_pred ECCCccCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hCCceEEE---Ecc--cCCCCeEEE-ECC
Confidence 4434456799999999888773 28899999999444 33332 22222222 222 22 367754 663
Q ss_pred CCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcccccccccccccccccccc
Q 016989 160 DTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (379)
Q Consensus 160 ~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 239 (379)
+++|..+.|+|. ..+.++|+|+|+++.++.|.+..... +..+ .....++ .++++.+.
T Consensus 163 -~g~v~~~~e~~~---~~~~~~Giy~~~~~~~~~l~~~l~~~--------------~~~~--~~~e~~~---~d~~~~l~ 219 (254)
T 1jyk_A 163 -DYKVQDIIVDSK---AGRILSGVSFWDAPTAEKIVSFIDKA--------------YVSG--EFVDLYW---DNMVKDNI 219 (254)
T ss_dssp -TCBEEEEECCCS---SEEBCCSEEEECHHHHHHHHHHHHHH--------------HTTT--CCTTCCT---THHHHTTG
T ss_pred -CCeEEEEEECCC---CCcEEEEEEEEcHHHHHHHHHHHHHH--------------HhcC--CccccCH---HHHHHHHH
Confidence 789999999853 46899999999987655444321110 0000 0011122 56777777
Q ss_pred CCceEEEEEcc-cchhhcCCccchhhcchHH
Q 016989 240 GKKQLYTYETM-DFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 240 ~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~ 269 (379)
++.++.++.++ ++|.+|+|++||.++++.+
T Consensus 220 ~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l 250 (254)
T 1jyk_A 220 KELDVYVEELEGNSIYEIDSVQDYRKLEEIL 250 (254)
T ss_dssp GGCCEEEEECCTTSEEECCSHHHHHHHHHHH
T ss_pred hhCCeEEEEecCCeEEEcCCHHHHHHHHHHh
Confidence 77889999987 7999999999999997655
No 23
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.93 E-value=5.6e-25 Score=197.79 Aligned_cols=221 Identities=12% Similarity=0.134 Sum_probs=159.3
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
+++.||||||| .|||| | ||+|+|++|||||+|+++.+.+ |+|++. . +.+.++++. +|.++.
T Consensus 8 M~~~aIIlA~G--~stRl-~-----~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~-~-~~i~~~~~~----~g~~v~ 73 (256)
T 3tqd_A 8 MEFRVIIPARF--DSTRL-P-----GKALVDIAGKPMIQHVYESAIKSGAEEVVIATD-D-KRIRQVAED----FGAVVC 73 (256)
T ss_dssp -CCEEEEECCC--C---C-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES-C-HHHHHHHHH----TTCEEE
T ss_pred CCceEEEEcCC--CCCCC-C-----CCCeeeECCchHHHHHHHHHHhCCCCEEEEECC-H-HHHHHHHHH----cCCeEE
Confidence 45899999999 99999 4 8999999999999999999975 666654 2 447777653 567777
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhc-CCceEEEEEEeCC----CCCCceeE
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNY-GGMGTILVIKVSA----ESASQFGE 154 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~-~~~~ti~~~~~~~----~~~~~~g~ 154 (379)
+..++...|++. +..+.+.+.....+.++++.||.++ ..++..+++.+.+. ++++++++.+... .++..++
T Consensus 74 ~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vk- 151 (256)
T 3tqd_A 74 MTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTK- 151 (256)
T ss_dssp ECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCE-
T ss_pred EeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccE-
Confidence 766677778875 7778777742123579999999988 56799999998774 4567777776531 2444555
Q ss_pred EEEeCCCCcEEEeeecCCCc--------------ccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhc
Q 016989 155 LVADPDTNELLHYTEKPETF--------------VSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSAT 220 (379)
Q Consensus 155 v~~d~~~~~v~~~~ekp~~~--------------~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (379)
+..|. +|+++.|.++|... ...+..+|+|.|++++|+.+....++.... .
T Consensus 152 vv~d~-~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~-----------~---- 215 (256)
T 3tqd_A 152 VVLNR-RNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEK-----------M---- 215 (256)
T ss_dssp EEECT-TSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHH-----------H----
T ss_pred EEECC-CCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccc-----------h----
Confidence 45663 79999999986421 256899999999999999988665432110 0
Q ss_pred cccccccccccccccccccCCceEEEEEcccc-hhhcCCccchhhcchH
Q 016989 221 RNLTTDFVRLDQDILSPLAGKKQLYTYETMDF-WEQIKTPGMSLKCSGL 268 (379)
Q Consensus 221 ~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~-w~~i~t~~d~~~a~~~ 268 (379)
+ + -+.++.|..+.+|+++..+++ |.+||||+||.+++++
T Consensus 216 -----e--~--leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 216 -----E--A--LEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp -----H--T--CTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred -----h--h--hHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 0 0 233444567789999999875 8999999999988643
No 24
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.92 E-value=1.3e-25 Score=210.31 Aligned_cols=232 Identities=18% Similarity=0.246 Sum_probs=154.3
Q ss_pred ceEEEEEecCCCCCCccCCCC-CCCCCCCceeCC-cchhHHHHHhcCc------EEEEcccch-HHHHHHHHhhcccCCc
Q 016989 8 KVVAVIMVGGPTKGTRFRPLS-LNIPKPLFPLGG-QPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRI 78 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt-~~~pK~llpi~g-~pli~~~i~~l~~------iiv~~~~~~-~~i~~~l~~~~~~~~~ 78 (379)
+|.+|||||| .||||+|+| ...||+|+|++| +|||+|+++++.. ++|+++... ..+.+++.. .
T Consensus 2 ~m~~VILAgG--~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~------~ 73 (337)
T 2cu2_A 2 KTYALVMAGG--RGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG------I 73 (337)
T ss_dssp CEEEEEECCC--CCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS------S
T ss_pred CeEEEEEcCC--CcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc------C
Confidence 3799999999 999999999 589999999999 9999999999864 666665442 233333321 2
Q ss_pred cEEEecCCCCCChHHHHHHHHHhhcc-CCCCeEEEEcCCeeec--CChHHHHHH----HHhcCCceEEEEEEeCCCCCCc
Q 016989 79 PVRYLREDKPHGSAGALYNFRDLIME-DNPSHIFLLNCDVCCS--FPLPEMLDA----HRNYGGMGTILVIKVSAESASQ 151 (379)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~i~~-~~~~~~lv~~gD~i~~--~dl~~~l~~----~~~~~~~~ti~~~~~~~~~~~~ 151 (379)
++ +.++...||+.++..+.. +.. ...+.+++++||+++. .++..+++. |.+ ++.+|+.+.+.. ..+.
T Consensus 74 ~~--i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~--~~t~ 147 (337)
T 2cu2_A 74 RL--LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTR--PETE 147 (337)
T ss_dssp EE--EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSS--CCSS
T ss_pred ce--EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCC--CCCC
Confidence 22 334667899999998876 532 1125799999999993 345555543 333 566677766552 4578
Q ss_pred eeEEEEeCCC----CcEEEeeecCCCcc------c-ceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhhhhh
Q 016989 152 FGELVADPDT----NELLHYTEKPETFV------S-DLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSA 219 (379)
Q Consensus 152 ~g~v~~d~~~----~~v~~~~ekp~~~~------~-~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
||++..++ + ++|..|.|||.... + .++++|+|+|+++.| +.+.+..+.... .+...
T Consensus 148 yG~I~~~~-~~~~~~~V~~f~EKp~~~~a~~~~~~g~~~n~Giy~f~~~~ll~~l~~~~p~~~~-----------~~~~~ 215 (337)
T 2cu2_A 148 YGYIRLGP-REGAWYRGEGFVEKPSYAEALEYIRKGYVWNGGVFAFAPATMAELFRRHLPSHHE-----------ALERL 215 (337)
T ss_dssp SCEEEEEE-EETTEEEEEEEECCCCHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHCHHHHH-----------HHHHH
T ss_pred ceEEEECC-cccccCeEEEEEeCCChHHHHHHhhcCCEEEEEEEEEeHHHHHHHHHHHCHHHHH-----------HHHHH
Confidence 99998763 4 68999999997421 1 689999999999876 777654332110 00000
Q ss_pred cccc--ccccccccccccc--cccCCceEEEEEcccchhhcCCccchhhc
Q 016989 220 TRNL--TTDFVRLDQDILS--PLAGKKQLYTYETMDFWEQIKTPGMSLKC 265 (379)
Q Consensus 220 ~~~~--~~~~~~l~~d~l~--~l~~~~~v~~~~~~~~w~~i~t~~d~~~a 265 (379)
..+. ...|..++...+. .+.++.++++++.+++|.|+||+++|.++
T Consensus 216 ~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~ 265 (337)
T 2cu2_A 216 LAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERV 265 (337)
T ss_dssp HTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHH
T ss_pred hcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHH
Confidence 0000 0001100011111 13345689999999999999999999876
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.92 E-value=2.5e-24 Score=194.40 Aligned_cols=222 Identities=15% Similarity=0.126 Sum_probs=161.8
Q ss_pred CCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccE
Q 016989 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPV 80 (379)
Q Consensus 6 ~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i 80 (379)
+|++.||||||| .|||| | +|+|+|++|||||+|+++.+.+ |+|++. .+.+.+++.. ++.++
T Consensus 16 ~M~~~aIIlA~G--~stRl-p-----~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~----~g~~v 81 (264)
T 3k8d_A 16 HMSFVVIIPARY--ASTRL-P-----GKPLVDINGKPMIVHVLERARESGAERIIVATD--HEDVARAVEA----AGGEV 81 (264)
T ss_dssp --CCEEEEECCS--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTCEE
T ss_pred CCceEEEEEcCC--CCCCC-C-----CcceeeECCeEHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCCEE
Confidence 456899999999 99999 3 5999999999999999999975 666664 2347776653 56777
Q ss_pred EEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCC----CCCCceeE
Q 016989 81 RYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSA----ESASQFGE 154 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~----~~~~~~g~ 154 (379)
.+..++...|++. +..+.+.+.....+.++++.||.++ ..+++++++.+.+.++++++++.+... .++..++
T Consensus 82 ~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vk- 159 (264)
T 3k8d_A 82 CMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVK- 159 (264)
T ss_dssp EECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCE-
T ss_pred EEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceE-
Confidence 6666677778875 7777777742123689999999988 677999999998878888888888742 1233334
Q ss_pred EEEeCCCCcEEEeeecCCC-------------cccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcc
Q 016989 155 LVADPDTNELLHYTEKPET-------------FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATR 221 (379)
Q Consensus 155 v~~d~~~~~v~~~~ekp~~-------------~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
+..|. +|+++.|.+||.. ....+.++|+|+|++++++.+....++... .
T Consensus 160 Vv~d~-~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE-----------~------ 221 (264)
T 3k8d_A 160 VVLDA-EGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLE-----------H------ 221 (264)
T ss_dssp EEECT-TSBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHH-----------H------
T ss_pred EEECC-CCeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhh-----------h------
Confidence 45664 8999999999742 124689999999999999888754322110 0
Q ss_pred ccccccccccccccccccCCceEEEEEc-ccchhhcCCccchhhcchH
Q 016989 222 NLTTDFVRLDQDILSPLAGKKQLYTYET-MDFWEQIKTPGMSLKCSGL 268 (379)
Q Consensus 222 ~~~~~~~~l~~d~l~~l~~~~~v~~~~~-~~~w~~i~t~~d~~~a~~~ 268 (379)
.+. -+.+..|..+.+|+++.. ...|.+||||+||.+|+++
T Consensus 222 ---~e~----leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~ 262 (264)
T 3k8d_A 222 ---IEM----LEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAE 262 (264)
T ss_dssp ---HHT----CTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHH
T ss_pred ---HHH----HHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 000 233444566789999865 4468999999999998754
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.90 E-value=1.5e-22 Score=181.77 Aligned_cols=223 Identities=13% Similarity=0.088 Sum_probs=158.8
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHH-HhcCc-----EEEEcccchHHHHHHHHhhcccCCccEEE
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPI-SACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i-~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
+.||||||| .|+||. +|+|+|++|||||+|++ +.+.+ |+|++.. +.+.+++. .+|.++.+
T Consensus 2 ~~aiIlA~G--~stR~~------~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~----~~g~~v~~ 67 (253)
T 4fcu_A 2 KHIVIPARF--SSSRLP------GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD--ERIAEICR----AEGVDVVL 67 (253)
T ss_dssp EEEEEECCS--CCTTST------TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHH----TTTCCEEE
T ss_pred eEEEEEeCC--CCCCCC------CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHH----HcCCeEEE
Confidence 579999999 999996 49999999999999999 88875 6666653 34666664 35677766
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcC-CceEEEEEEeC----CCCCCceeEE
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYG-GMGTILVIKVS----AESASQFGEL 155 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~-~~~ti~~~~~~----~~~~~~~g~v 155 (379)
..++...|+ +++..+.+.+.....+.++++.||.|+ ...++++++.|.+.+ +.++.++.+.. ..+|..++ +
T Consensus 68 ~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~k-v 145 (253)
T 4fcu_A 68 TSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVK-V 145 (253)
T ss_dssp CCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCE-E
T ss_pred eCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccE-E
Confidence 656666677 478888887753223689999999988 567999999988763 34443444432 13455554 4
Q ss_pred EEeCCCCcEEEeeecCCC-------------cccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccc
Q 016989 156 VADPDTNELLHYTEKPET-------------FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRN 222 (379)
Q Consensus 156 ~~d~~~~~v~~~~ekp~~-------------~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (379)
..+. +|+++.|.++|-. +...+.++|+|+|++++|+.+....++. + +++
T Consensus 146 v~d~-~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~----l--e~~----------- 207 (253)
T 4fcu_A 146 VMSK-QNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGK----L--EKL----------- 207 (253)
T ss_dssp EECT-TSBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCH----H--HHH-----------
T ss_pred EECC-CCeEEEecCCCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCc----c--cch-----------
Confidence 5663 7999999987531 2345789999999999998887543221 1 000
Q ss_pred cccccccccccccccccCCceEEEEEcccc-hhhcCCccchhhcchHHHHh
Q 016989 223 LTTDFVRLDQDILSPLAGKKQLYTYETMDF-WEQIKTPGMSLKCSGLYLAQ 272 (379)
Q Consensus 223 ~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~-w~~i~t~~d~~~a~~~~l~~ 272 (379)
+. -+.+..+..+.+|+++..+++ |.++|||+||.++++++..+
T Consensus 208 ---e~----le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 208 ---ES----LEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp ---HT----CTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred ---hH----HHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 00 122333456789999999999 99999999999998766544
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.89 E-value=2.3e-22 Score=179.07 Aligned_cols=217 Identities=16% Similarity=0.142 Sum_probs=147.9
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc----EEEEcccchHHHHHHHHhhcccCCccEEEe
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~ 83 (379)
++.||||||| .|+||+ ||+|+|++|+|||+|+++.+.. |+|++.. +.+.++++. + .++.+.
T Consensus 2 ~~~aiIlA~G--~g~R~~------~K~l~~i~g~pli~~~l~~~~~~~~~i~v~~~~--~~i~~~~~~----~-~~~~~~ 66 (234)
T 2y6p_A 2 RRAVIIPARL--GSTRLK------EKPLKNLLGKPLIRWVVEGLVKTGERVILATDS--ERVKEVVED----L-CEVFLT 66 (234)
T ss_dssp CEEEEEECCS--CCTTTT------TGGGCEETTEEHHHHHHHHHHTTTSCEEEEESC--HHHHHHHTT----T-SEEEEC
T ss_pred ceEEEEEcCC--CCCCCC------CCcceeECCEEHHHHHHHHHHHhCCEEEEECCh--HHHHHHHHh----c-eEEEEC
Confidence 4789999999 999997 8999999999999999999865 6666654 346676653 2 445444
Q ss_pred cCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-c-CChHHHHHHHHhcCCceEEEEEEeC-CCCCCceeEEEEeCC
Q 016989 84 REDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-S-FPLPEMLDAHRNYGGMGTILVIKVS-AESASQFGELVADPD 160 (379)
Q Consensus 84 ~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~-~dl~~~l~~~~~~~~~~ti~~~~~~-~~~~~~~g~v~~d~~ 160 (379)
.+....|++.++ .+.+.+. .+.+++++||.|+ + .+++++++.|.+.++.++++..... ..++..++ +..++
T Consensus 67 ~~~~~~g~~~~~-~~~~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 140 (234)
T 2y6p_A 67 PSDLPSGSDRVL-YVVRDLD---VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERPEDVK-VVLDR- 140 (234)
T ss_dssp CTTCCSHHHHHH-HHHTTCC---CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCTTSCE-EEECT-
T ss_pred CcccccchHHHH-HHHHhCC---CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCCCceE-EEEcC-
Confidence 445566777765 4555543 3579999999966 4 7899999999877643444433211 11233444 33453
Q ss_pred CCcEEEeeecCCC--cc----cceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccc
Q 016989 161 TNELLHYTEKPET--FV----SDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDI 234 (379)
Q Consensus 161 ~~~v~~~~ekp~~--~~----~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~ 234 (379)
+++|..+.+||.. .. ..+.++|+|+|+++.+..+......... ..++. . .
T Consensus 141 ~g~v~~~~e~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~--------------------~~d~~---~-~ 196 (234)
T 2y6p_A 141 EGYALYFSRSPIPYFRKNDTFYPLKHVGIYGFRKETLMEFGAMPPSKLE--------------------QIEGL---E-Q 196 (234)
T ss_dssp TSBEEEEESSCCSCCSSCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHH--------------------HHHTC---T-H
T ss_pred CCCEeeeecCCCCcccccccceeeEEEEEEEcCHHHHHHHHhCCCCccc--------------------hhhHH---H-H
Confidence 7899999998742 11 3578999999999987766532211100 00110 1 1
Q ss_pred cccccCCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 235 LSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 235 l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
++.+..+.++.++..+++|.+|+||+||..++.++
T Consensus 197 ~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 197 LRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred HHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 22344567899999999999999999999886543
No 28
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.88 E-value=1.3e-22 Score=180.56 Aligned_cols=211 Identities=16% Similarity=0.231 Sum_probs=128.7
Q ss_pred CCCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc----EEEEcccchHHHHHHHHhhcccCCcc
Q 016989 4 SEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIP 79 (379)
Q Consensus 4 ~~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~----iiv~~~~~~~~i~~~l~~~~~~~~~~ 79 (379)
.|++++.||||||| .|+||+|+ ||+|+|++|+|||+|+++.+.. |+|++ ...+.+.+++. ..++.+
T Consensus 14 ~~m~~~~~iIlA~G--~g~R~~~~----~K~l~~i~g~pli~~~l~~l~~~~~~i~vv~-~~~~~~~~~~~---~~~~~~ 83 (232)
T 2xme_A 14 GRIKLMKAVILAAG--LGTRLGGV----PKPLVRVGGCEIILRTMKLLSPHVSEFIIVA-SRYADDIDAFL---KDKGFN 83 (232)
T ss_dssp --CCCEEEEEEECC--------CC----CGGGCEETTEEHHHHHHHHHGGGEEEEEEEE-STTHHHHHHHH---TTSCCC
T ss_pred cccccceEEEECCc--CcCcCCCC----CcEEeEECCEEHHHHHHHHHHHhCCEEEEEe-CChHHHHHHHH---HhcCCc
Confidence 35567999999999 99999985 9999999999999999999876 66666 33344666653 234555
Q ss_pred EEEecCCC-CCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEE
Q 016989 80 VRYLREDK-PHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGTILVIKVSAESASQFGELVA 157 (379)
Q Consensus 80 i~~~~~~~-~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-l~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~ 157 (379)
+.++.++. ..|++++++.+++.+++ ++++++||.+++.+ ++.+++ .. .+++...........++.+..
T Consensus 84 ~~~v~~~~~~~g~~~~i~~a~~~~~~----~~lv~~~D~p~~~~~~~~l~~----~~--~~~~~~~~~~~~~~~~~~v~~ 153 (232)
T 2xme_A 84 YKIVRHDRPEKGNGYSLLVAKNHVED----RFILTMGDHVYSQQFIEKAVR----GE--GVIADREPRFVDIGEATKIRV 153 (232)
T ss_dssp EEEEECSCGGGCHHHHHHTTGGGCCS----SEEEEETTEEECHHHHHHHTT----CC--EEEEESSCSSSCTTTSCEEEE
T ss_pred EEEEECCCCCCCcHHHHHHHHHHCCC----CEEEEcCCcccCHHHHHHHHh----CC--CcEEEccccccCCCcceEEEE
Confidence 66665444 37999999999888752 49999999998433 344433 21 122211111112345666666
Q ss_pred eCCCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcccccccccccccccccc
Q 016989 158 DPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSP 237 (379)
Q Consensus 158 d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~ 237 (379)
+ ++++..+.+++. ..++.++|+|++++++|+.+.+.... ++. .+ .+++.
T Consensus 154 ~--~g~v~~~~~~~~--~~~~~~~g~~~~~~~~~~~l~~~~~~---g~~-------------------~l----~~ll~- 202 (232)
T 2xme_A 154 E--DGRVAKIGKDLR--EFDCVDTGFFVLDDSIFEHAEKLRDR---EEI-------------------PL----SEIVK- 202 (232)
T ss_dssp E--TTEEEEEETTCS--SCSEEEEEEEEECTTHHHHHGGGTTS---SCC-------------------CH----HHHHH-
T ss_pred c--CCEEEEeecCCC--CcceEEEEEEEECHHHHHHHHHHHhc---Chh-------------------HH----HHHHH-
Confidence 5 589999998864 35678999999999999877653210 000 00 22222
Q ss_pred ccCCceEEEEEcc-cchhhcCCccchhhcchH
Q 016989 238 LAGKKQLYTYETM-DFWEQIKTPGMSLKCSGL 268 (379)
Q Consensus 238 l~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~ 268 (379)
...+..+.++ ++|.+++||+||.+++++
T Consensus 203 ---~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 203 ---LARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp ---HHTCBEEECCSCCEEEEECC---------
T ss_pred ---cCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 2245555554 689999999999887643
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.88 E-value=1e-21 Score=177.90 Aligned_cols=223 Identities=13% Similarity=0.146 Sum_probs=152.0
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEEE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
++.||||||| .|+|| | +|+|+|++|+|||+|+++.+.. |+|++.. +.+.+++.. +++++..
T Consensus 2 ~~~aiIlA~G--~g~R~-~-----~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~----~~~~~~~ 67 (262)
T 1vic_A 2 SFTVIIPARF--ASSRL-P-----GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN--ENVADVAKS----FGAEVCM 67 (262)
T ss_dssp CCEEEEECCC--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH----TTCEEEE
T ss_pred CcEEEEEcCC--CCCCC-C-----CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh----cCCEEEE
Confidence 4789999999 99999 5 5999999999999999999875 6666654 336666653 3555533
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCC---CCCceeEEEE
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAE---SASQFGELVA 157 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~---~~~~~g~v~~ 157 (379)
..+....|++ .+..+...+.....+.+++++||.++ ..++.++++.+.+.++++++++.+.... ....|..+..
T Consensus 68 ~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (262)
T 1vic_A 68 TSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLT 146 (262)
T ss_dssp CCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEE
T ss_pred CCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEE
Confidence 3234455665 55566666642223579999999987 5679999999888777787877776321 0234454554
Q ss_pred eCCCCcEEEeeecC-----------------CCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhc
Q 016989 158 DPDTNELLHYTEKP-----------------ETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSAT 220 (379)
Q Consensus 158 d~~~~~v~~~~ekp-----------------~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (379)
+ ++|++..|.+++ +.+...+.++|+|+|+++++..+..........
T Consensus 147 ~-~~g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~~~---------------- 209 (262)
T 1vic_A 147 D-KDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLEN---------------- 209 (262)
T ss_dssp C-TTSBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHHHH----------------
T ss_pred C-CCCCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCchhh----------------
Confidence 5 368998888764 122235789999999998887654322111000
Q ss_pred cccccccccccccccccccCCceEEEEEcc-cchhhcCCccchhhcchHHH
Q 016989 221 RNLTTDFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 221 ~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~l 270 (379)
.++ + +. +..+..+.++.++..+ ++|.+|+||+||..|+.++.
T Consensus 210 ----~e~--~-~~-~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~ 252 (262)
T 1vic_A 210 ----LEK--L-EQ-LRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILA 252 (262)
T ss_dssp ----HHT--C-TT-HHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHH
T ss_pred ----hhh--H-HH-HHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHH
Confidence 000 0 11 1223346789999998 79999999999999977664
No 30
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.86 E-value=1.1e-20 Score=169.30 Aligned_cols=217 Identities=18% Similarity=0.240 Sum_probs=150.0
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
++.||||||| .|+|| | ||+|+|++|+|||+|+++.+.. |+|++.+ +.+.+++.. +++++.
T Consensus 2 ~~~aiIlA~G--~~~R~-~-----~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~~~~~ 67 (245)
T 1h7e_A 2 KAVIVIPARY--GSSRL-P-----GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA----FGGKAI 67 (245)
T ss_dssp CEEEEEECCS--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH----TTCEEE
T ss_pred CeEEEEEcCC--cCCCC-C-----CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH----cCCeEE
Confidence 4799999999 99999 6 9999999999999999999864 6666654 346666653 345554
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhc-CCceEEEEEEeCCC---CCCceeEE
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNY-GGMGTILVIKVSAE---SASQFGEL 155 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~-~~~~ti~~~~~~~~---~~~~~g~v 155 (379)
...++...|++.++ .+...+. .+.+++++||.++ ..++.++++.|.+. ++++++++.+.... ++.... +
T Consensus 68 ~~~~~~~~g~~~~~-~~~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 142 (245)
T 1h7e_A 68 MTRNDHESGTDRLV-EVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVK-V 142 (245)
T ss_dssp ECCSCCSSHHHHHH-HHHHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCE-E
T ss_pred eCCCccCCcHHHHH-HHHHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHHhcCCCCcE-E
Confidence 43345566776544 4555553 2579999999987 56799999998887 67777777665111 122222 2
Q ss_pred EEeCCCCcEEEeeecCCC--c----ccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcccccccccc
Q 016989 156 VADPDTNELLHYTEKPET--F----VSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVR 229 (379)
Q Consensus 156 ~~d~~~~~v~~~~ekp~~--~----~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (379)
..+ +++++..|.+++.. . ...+.++|+|+|+++.+..+.... .+++ |+
T Consensus 143 ~~~-~~g~~~~~~~~~~~~~r~~~~~~~~~~~g~y~~~~~~l~~~~~~~----~~~~--~~------------------- 196 (245)
T 1h7e_A 143 VVN-TRQDALYFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQLP----ESMP--EQ------------------- 196 (245)
T ss_dssp EEC-TTCBEEEEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGSC----CCHH--HH-------------------
T ss_pred EEC-CCCcEEEeecCCCCCCcccccCceeEEEEEEEcCHHHHHHHHhCC----CCcc--cc-------------------
Confidence 224 37899998876432 1 235789999999998765443221 1111 11
Q ss_pred ccccccccc---cCCceEEEEEcccchhhcCCccchhhcchHHHH
Q 016989 230 LDQDILSPL---AGKKQLYTYETMDFWEQIKTPGMSLKCSGLYLA 271 (379)
Q Consensus 230 l~~d~l~~l---~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l~ 271 (379)
.|.++.+ ..+.++.++..++.|.+|+||+||..+..++..
T Consensus 197 --td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~~ 239 (245)
T 1h7e_A 197 --AESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQ 239 (245)
T ss_dssp --HHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHHH
T ss_pred --chhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 3444332 346789999999999999999999999876654
No 31
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.83 E-value=3.6e-20 Score=164.25 Aligned_cols=202 Identities=14% Similarity=0.051 Sum_probs=137.5
Q ss_pred CCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcccCCcc
Q 016989 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIP 79 (379)
Q Consensus 6 ~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~~~~~~ 79 (379)
++++.||||||| .|+||+ ||+|+|++|+|||+|+++.+.+ |+|++.. +.+.+++.. ++.+
T Consensus 2 ~m~~~aiIlA~G--~g~R~~------~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~~~ 67 (228)
T 1ezi_A 2 EKQNIAVILARQ--NSKGLP------LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN----FGVE 67 (228)
T ss_dssp CCEEEEEEECCS--SCSSST------TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH----TTCE
T ss_pred CCceEEEEecCC--CCCCCC------CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH----cCCE
Confidence 355789999999 999998 7999999999999999999864 6666653 235565543 3455
Q ss_pred EEEecCC----CCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCcee
Q 016989 80 VRYLRED----KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFG 153 (379)
Q Consensus 80 i~~~~~~----~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g 153 (379)
+ +.... ...|++++++.+++.+.. ..+.+++++||.++ ..+++++++.+.+.++++++++.+... .+ ++
T Consensus 68 ~-~~~~~~~~~~~~g~~~sv~~~l~~~~~-~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~-~p--~~ 142 (228)
T 1ezi_A 68 V-VLRPAELASDTASSISGVIHALETIGS-NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEH-HP--LK 142 (228)
T ss_dssp E-EECCC------CHHHHHHHHHHHHHTC-CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSS-CT--TS
T ss_pred E-EeCchHHcCCCCChHHHHHHHHHHhCC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCC-Cc--ce
Confidence 5 22222 356788999999988842 23579999999987 567899998887767777887777632 12 33
Q ss_pred EEEEeCCCCcEEEeee-c---CC--C-cccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccc
Q 016989 154 ELVADPDTNELLHYTE-K---PE--T-FVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTD 226 (379)
Q Consensus 154 ~v~~d~~~~~v~~~~e-k---p~--~-~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (379)
....+ ++|++..+.+ + +. . ......++|+|++++..+......
T Consensus 143 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~----------------------------- 192 (228)
T 1ezi_A 143 TLLQI-NNGEYAPMRHLSDLEQPRQQLPQAFRPNGAIYINDTASLIANNCF----------------------------- 192 (228)
T ss_dssp CEEEC-C--CEEESSCHHHHTCCGGGSCCEEEEEEEEEEEEHHHHHHHTSS-----------------------------
T ss_pred eeEEc-CCCcEeeccccccccCCcccCchhheeeeEEEEEeHHHHhhCCcc-----------------------------
Confidence 33335 3678888866 2 11 1 122345789999998765432100
Q ss_pred cccccccccccccCCceEEEEEcc-cchhhcCCccchhhcchHH
Q 016989 227 FVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 227 ~~~l~~d~l~~l~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~ 269 (379)
-+.++..+..+ ..|.+|+||+||..+..++
T Consensus 193 -------------~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l 223 (228)
T 1ezi_A 193 -------------FIAPTKLYIMSHQDSIDIDTELDLQQAENIL 223 (228)
T ss_dssp -------------CCSSCEEEECCTGGGCCCCSHHHHHHHHHHH
T ss_pred -------------cCCceEEEEeCcccccCCCCHHHHHHHHHHH
Confidence 02356666665 5899999999999886554
No 32
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.81 E-value=1.3e-18 Score=167.89 Aligned_cols=180 Identities=15% Similarity=0.189 Sum_probs=136.7
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeC-CcchhHHHHHhcCc-----------EEEEcccchHHHHHHHHhhcc
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR-----------IYLVGFYEEREFALYVSSISN 74 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~-g~pli~~~i~~l~~-----------iiv~~~~~~~~i~~~l~~~~~ 74 (379)
.++.+|||||| .||||+. ..||+|+|+. |+|+|+++++++.+ ++++.++..+.+++|+++. +
T Consensus 78 ~k~~vviLAGG--lGTRLg~---~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~-~ 151 (469)
T 2icy_A 78 DKLVVLKLNGG--LGTTMGC---TGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY-T 151 (469)
T ss_dssp TTEEEEEEECC--BSGGGTC---CSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG-T
T ss_pred ccceEEEEcCC--ccccCCC---CCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc-c
Confidence 46899999999 9999964 8899999999 99999999998753 4566666566799999874 5
Q ss_pred cCCccEEEecC------------------------CCCCChHHHHHHH-----HHhhccCCCCeEEEEcCCeeecCChHH
Q 016989 75 ELRIPVRYLRE------------------------DKPHGSAGALYNF-----RDLIMEDNPSHIFLLNCDVCCSFPLPE 125 (379)
Q Consensus 75 ~~~~~i~~~~~------------------------~~~~g~~~al~~~-----~~~i~~~~~~~~lv~~gD~i~~~dl~~ 125 (379)
.+|++|.+..| ..+.|+++.+... ++.+.....++++|+++|++.......
T Consensus 152 ~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ 231 (469)
T 2icy_A 152 NSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLT 231 (469)
T ss_dssp TSSSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHH
T ss_pred cCCceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHH
Confidence 67888876533 2578999988764 233322223689999999987544447
Q ss_pred HHHHHHhcCCceEEEEEEeCCCCC-CceeEEEEeCCCCc--EEEeeecCCC--------cccceeeeeEEEeCHhhHHHh
Q 016989 126 MLDAHRNYGGMGTILVIKVSAESA-SQFGELVADPDTNE--LLHYTEKPET--------FVSDLINCGVYVFTPDIFNAI 194 (379)
Q Consensus 126 ~l~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~d~~~~~--v~~~~ekp~~--------~~~~~~~~Giy~~~~~~l~~l 194 (379)
++..|.++++++++.+.+.. .+ ..||.+... +++ +..+.|+|.. ...++.|+|+|+|++++++.+
T Consensus 232 ll~~~~~~~a~~t~~v~~k~--~~~~~~Gvl~~~--dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~~~~L~~i 307 (469)
T 2icy_A 232 ILKHLIQNKNEYCMEVTPKT--LADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKL 307 (469)
T ss_dssp HHHHHHHHTCSEEEEEEECC--TTCCSSCEEEEE--TTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEEHHHHHHH
T ss_pred HHHHHHHcCCCeeEEEEEec--cCCCceeEEEEE--CCEEEEEEEeccChhhhhhhccccccceeeEEEEEEcHHHHHHH
Confidence 99999999999999888763 34 578887764 454 5666667653 234678999999999998877
Q ss_pred hc
Q 016989 195 QG 196 (379)
Q Consensus 195 ~~ 196 (379)
.+
T Consensus 308 ~~ 309 (469)
T 2icy_A 308 VE 309 (469)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 33
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.78 E-value=1.6e-18 Score=154.22 Aligned_cols=215 Identities=14% Similarity=0.084 Sum_probs=129.2
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccch-HHHHHHHHhhcccCCccEE
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRIPVR 81 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~-~~i~~~l~~~~~~~~~~i~ 81 (379)
+.||||||| .|+||++ ..+||+|+|++|+|||+|+++.+.+ |+|++.... +.+.+++....-.+.....
T Consensus 3 ~~~iIlA~G--~g~R~~~--~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (236)
T 2vsh_A 3 IYAGILAGG--TGTRMGI--SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERII 78 (236)
T ss_dssp EEEEEEEC---------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEE
T ss_pred eEEEEeCCc--cccccCC--CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhccccccCceE
Confidence 689999999 9999998 6789999999999999999999863 666665544 4466666542100111222
Q ss_pred EecCCCCCChHHHHHHHHHhhcc--C--CCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEE
Q 016989 82 YLREDKPHGSAGALYNFRDLIME--D--NPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGEL 155 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~--~--~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v 155 (379)
.. ....|+.++++.+++.+.. . ..+.+++++||+|+ ..++.++++.|.+.++ ++++.+.. ++ +
T Consensus 79 ~~--~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~~~--~~-----~ 147 (236)
T 2vsh_A 79 IT--KGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVEAV--DT-----I 147 (236)
T ss_dssp EE--ECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEECC--SC-----E
T ss_pred EE--CCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEecc--cc-----E
Confidence 22 2235788999999888742 1 12579999999976 5679999999887654 34444442 22 1
Q ss_pred EEeCCCC-cEEEeeecCCCcccceeeeeEEEeCHhhHH-Hhhccccccccchhhhhcchhhhhhhhcccccccccccccc
Q 016989 156 VADPDTN-ELLHYTEKPETFVSDLINCGVYVFTPDIFN-AIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQD 233 (379)
Q Consensus 156 ~~d~~~~-~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 233 (379)
..+ ++| ++..+.+++.. ......|+|+++.+. .+...... + + | .+ .+
T Consensus 148 ~~~-~~g~~~~~~~~~~~~----~~~~~p~~f~~~~l~~~~~~~~~~---g-~--~-------------------~~-~~ 196 (236)
T 2vsh_A 148 VES-TNGQFITDIPNRAHL----YQGQTPQTFRCKDFMDLYGSLSDE---E-K--E-------------------IL-TD 196 (236)
T ss_dssp EEC-SSSSBCCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTCCHH---H-H--H-------------------HC-CS
T ss_pred EEe-CCCCeeeeecChHHh----eeecCCcEecHHHHHHHHHHHHhc---C-C--C-------------------cC-CC
Confidence 223 267 78777776431 112347889987665 44322110 0 0 0 00 22
Q ss_pred cccccc-CCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 234 ILSPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 234 ~l~~l~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
.++.+. .+.++..+..+++|.+|+||+||..++.++
T Consensus 197 ~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~ 233 (236)
T 2vsh_A 197 ACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMI 233 (236)
T ss_dssp HHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHh
Confidence 222222 245788888888999999999999886543
No 34
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.77 E-value=7.1e-20 Score=162.75 Aligned_cols=216 Identities=13% Similarity=0.144 Sum_probs=136.8
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc----EEEEcccchHHHHHHHHhhcccCCccEEEe
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~ 83 (379)
+|.+|||||| . |||++.+...||+|+|++|+|||+|+++.+.. |+|+++. ++ +.++ +++. +
T Consensus 2 ~~~~vIlAaG--~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~~~~ivvv~~~-~~-i~~~-------~~~~--~- 66 (232)
T 2dpw_A 2 RPSAIVLAGG--K-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGLSPVYVGEN-PG-LVPA-------PALT--L- 66 (232)
T ss_dssp CCEEEEECCC--B-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTCEEEEESCC-SS-CSSC-------CSEE--E-
T ss_pred ceeEEEECCC--C-CccccccCCCCceeeEECCEEHHHHHHHHHHhcCCEEEEEeCh-HH-Hhhh-------cCeE--e-
Confidence 3789999999 8 77777665689999999999999999999875 6666664 22 2221 1333 3
Q ss_pred cCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCCC
Q 016989 84 REDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDT 161 (379)
Q Consensus 84 ~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~ 161 (379)
....|++++++.+.+.+. +.+++++||+++ ..++.++++ | ..++++++...+... ....|+.+ .
T Consensus 67 --~~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~-~~~~~~~~-----~ 132 (232)
T 2dpw_A 67 --PDRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEA-VEARFPRT-----K 132 (232)
T ss_dssp --CCCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHH-HHHHCTTC-----C
T ss_pred --cCCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccc-hhhhCCCc-----c
Confidence 456799999999988875 369999999976 567899998 6 556677777665310 01233311 2
Q ss_pred CcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhcccccc--ccch--hhhhcchhhhhhhhcccccccccccccccccc
Q 016989 162 NELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQR--KDRE--NLRRVSSFEALQSATRNLTTDFVRLDQDILSP 237 (379)
Q Consensus 162 ~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~ 237 (379)
.+|..+.||| ..++|+|+|+++++..+.+..... ..+. .+.|.+-.+.+... ...++. + +++++.
T Consensus 133 ~~v~~~~ek~------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~~~l~~~---~~ge~~-l-~~~~~~ 201 (232)
T 2dpw_A 133 RTYARLREGT------FTGGNLLLLDKSLFRKALPLARRVVALRKRPLALARLVGWDVLLKL---LLGRLS-L-AEVEAR 201 (232)
T ss_dssp CCCEEETTEE------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHHHHHHCHHHHHHH---HHTCCC-H-HHHHHH
T ss_pred eeEEEEecCc------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHHHHHHCHHHHHHH---HhccCC-H-HHHHHH
Confidence 3577777775 388999999998876664322111 0000 00000000000000 001111 1 455544
Q ss_pred ccC--CceEEEEEc--ccchhhcCCccchh
Q 016989 238 LAG--KKQLYTYET--MDFWEQIKTPGMSL 263 (379)
Q Consensus 238 l~~--~~~v~~~~~--~~~w~~i~t~~d~~ 263 (379)
+.. +.++..+.. .+.|.++|||+||.
T Consensus 202 ~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 202 AQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 432 367888887 45799999999884
No 35
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.77 E-value=7.1e-18 Score=151.15 Aligned_cols=218 Identities=16% Similarity=0.159 Sum_probs=139.7
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchH-HHHHHHHhhcccCCccE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEER-EFALYVSSISNELRIPV 80 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~-~i~~~l~~~~~~~~~~i 80 (379)
++.+|||||| .|+||++ ..+||+|+|++|+|||+|+++.+.+ |+|++..... .+.+.+..+.. ...+
T Consensus 3 ~~~aIIlAaG--~g~Rm~~--~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~--~~~~ 76 (246)
T 3f1c_A 3 LIYAQILAGG--KGTRMGN--VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYIS--DDRI 76 (246)
T ss_dssp CEEEEEECC-------C-C--SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCC--CTTE
T ss_pred ccEEEEECCc--cccccCC--CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCC--CCCE
Confidence 4799999999 9999987 5789999999999999999999854 6665554332 34455544221 2234
Q ss_pred EEecCCCCCChHHHHHHHHHhhcc----CCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeE
Q 016989 81 RYLREDKPHGSAGALYNFRDLIME----DNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGE 154 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~----~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~ 154 (379)
.++. ...+..++++.+++.+.. ...+.+++++||.|+ ...+.++++.+.+.++ .+++.+.. + .+
T Consensus 77 ~~~~--~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a--~i~~~~~~--d----~i 146 (246)
T 3f1c_A 77 VVIE--GGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA--VDTVIEAL--D----TI 146 (246)
T ss_dssp EEEE--CCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE--EEEEEECS--S----CE
T ss_pred EEEC--CCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEecc--c----eE
Confidence 4443 234778899999988864 123689999999988 5679999999988654 44455542 1 33
Q ss_pred EEEeCCCCcEEEeeecCCCcccceeeeeEEEeCHhh-HHHhhccccccccchhhhhcchhhhhhhhcccccccccccccc
Q 016989 155 LVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDI-FNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQD 233 (379)
Q Consensus 155 v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 233 (379)
+..+ +++.+..+.+++.. +..-.-++|+.+. ++.+...... +++ |+ +|
T Consensus 147 ~~~~-~~~~v~~~~~r~~l----~~~qtpq~f~~~~L~~a~~~~~~~---~~~--~~---------------------TD 195 (246)
T 3f1c_A 147 VESS-NHEVITDIPVRDHM----YQGQTPQSFNMKKVFNHYQNLTPE---KKQ--IL---------------------TD 195 (246)
T ss_dssp EECS-SSSBCCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTSCHH---HHH--HC---------------------CC
T ss_pred EEec-CCCeEEEecChHHh----hhhcCCceeEHHHHHHHHHHHHHc---CCC--cc---------------------Cc
Confidence 3433 25667666666431 1222456888655 4566543211 111 22 23
Q ss_pred cccccc-CCceEEEEEcccchhhcCCccchhhcchHHHHh
Q 016989 234 ILSPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLYLAQ 272 (379)
Q Consensus 234 ~l~~l~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l~~ 272 (379)
....+. .+.++..++.+..|..|+||+||..++.++..+
T Consensus 196 ~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~ 235 (246)
T 3f1c_A 196 ACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQER 235 (246)
T ss_dssp HHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhcc
Confidence 333332 356899999988999999999999998777543
No 36
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.76 E-value=9.7e-18 Score=148.69 Aligned_cols=214 Identities=16% Similarity=0.196 Sum_probs=122.9
Q ss_pred CCCCCCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcc
Q 016989 1 MGSSEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISN 74 (379)
Q Consensus 1 m~~~~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~ 74 (379)
|++. +++.+|||||| .|+||++ ..||+|+|++|+|||+|+++.+.. |+|++.+..+.+.+ +....
T Consensus 1 m~~~--~~~~aiIlA~G--~g~R~~~---~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~- 71 (231)
T 1vgw_A 1 MSLK--RKNIALIPAAG--IGVRFGA---DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAF- 71 (231)
T ss_dssp ---C--CCEEEEEECC---------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHC-
T ss_pred CCCC--CceEEEEEccc--ccccCCC---CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcC-
Confidence 4443 45899999999 9999997 689999999999999999999863 66666544334555 43321
Q ss_pred cCCccEEEecCCCCCChHHHHHHHHHhhccC----CCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCC
Q 016989 75 ELRIPVRYLREDKPHGSAGALYNFRDLIMED----NPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAES 148 (379)
Q Consensus 75 ~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~----~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~ 148 (379)
. ..+.++ ....|++++++.+++.+... ..+.+++++||.++ ...+.++++.+.+.+. ..+++.+.. +
T Consensus 72 -~-~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~-~~~~~~~~~--~ 144 (231)
T 1vgw_A 72 -P-QVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAE-GGILAVPVA--D 144 (231)
T ss_dssp -T-TSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTT-CEEEEEECC--S
T ss_pred -C-CceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCC-eEEEEeecc--c
Confidence 1 234444 34568999999998877421 23579999999987 4568999998866542 334444432 1
Q ss_pred CCceeEEEEeCCCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHh-hccccccccchhhhhcchhhhhhhhcccccccc
Q 016989 149 ASQFGELVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAI-QGVSSQRKDRENLRRVSSFEALQSATRNLTTDF 227 (379)
Q Consensus 149 ~~~~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (379)
. . ...+ +|++....++ ...+...+.|+|+++.+..+ ....... . + +.
T Consensus 145 ~--~--~~~~--~g~i~~~~~~----~~~~~~~~p~~f~~~~l~~~~~~~~~~g----~----~--------------~~ 192 (231)
T 1vgw_A 145 T--L--KRAE--SGQISATVDR----SGLWQAQTPQLFQAGLLHRALAAENLGG----I----T--------------DE 192 (231)
T ss_dssp C--E--EEES--SSBEEEEECC----TTEEEEEEEEEEEHHHHHHHHHC----C----C----C--------------SH
T ss_pred c--e--EEeC--CCceEecCCh----HHheeeeCCcEecHHHHHHHHHHHhhcC----C----C--------------cH
Confidence 1 1 1122 4555433222 11122235889998766543 3211000 0 0 00
Q ss_pred ccccccccccccCCceEEEEEcccchhhcCCccchhhcchH
Q 016989 228 VRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGL 268 (379)
Q Consensus 228 ~~l~~d~l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~ 268 (379)
..++..+ +.++..+..++.|.+|+||+||..+..+
T Consensus 193 ----~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~ 227 (231)
T 1vgw_A 193 ----ASAVEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLL 227 (231)
T ss_dssp ----HHHHHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHH
T ss_pred ----HHHHHHc--CCCEEEEECCccccCcCCHHHHHHHHHH
Confidence 1122221 3567777777789999999999988654
No 37
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.75 E-value=1.7e-17 Score=147.04 Aligned_cols=200 Identities=13% Similarity=0.086 Sum_probs=129.8
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcccCCccE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPV 80 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~~~~~~i 80 (379)
+++.||||||| .|+||. +|+|+|++|+|||+|+++.+.+ |+|++. . +.+.+++.. +++++
T Consensus 2 ~~~~aiIlA~G--~s~R~~------~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~-~-~~i~~~~~~----~g~~~ 67 (229)
T 1qwj_A 2 PHLAALVLARG--GSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTD-H-DEIENVAKQ----FGAQV 67 (229)
T ss_dssp CCEEEEEECCS--CCSSSS------CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEES-C-HHHHHHHHH----TTCEE
T ss_pred CcEEEEEEcCC--CCCCCC------CcccceECCEEHHHHHHHHHHhCCCcCEEEEECC-h-HHHHHHHHH----cCCEE
Confidence 45789999999 999994 5999999999999999999864 666653 2 346666643 35655
Q ss_pred EEecC---CCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEE
Q 016989 81 RYLRE---DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGEL 155 (379)
Q Consensus 81 ~~~~~---~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v 155 (379)
..... ....+..+++..+++.+.. .+.+++++||.++ ..+++++++.|.+.+++.++.+.+. .++..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~v~~al~~~~~--~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~--~~p~~~~v- 142 (229)
T 1qwj_A 68 HRRSSETSKDSSTSLDAIVEFLNYHNE--VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRR--HQFRWSEI- 142 (229)
T ss_dssp EECCGGGSSTTCCHHHHHHHHHTTCTT--CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEE--CCCEECCC-
T ss_pred EeChhhhcCCCCcHHHHHHHHHHhcCC--CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeec--cChhHhhc-
Confidence 33221 1233445788888887732 3579999999988 5679999999988777765555533 23333332
Q ss_pred EEeCCCCcEEE--eeec------CCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcccccccc
Q 016989 156 VADPDTNELLH--YTEK------PETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDF 227 (379)
Q Consensus 156 ~~d~~~~~v~~--~~ek------p~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (379)
.+ ....+.. +.++ +..+.....++|+|+|+++.| +..
T Consensus 143 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l--~~~------------------------------- 187 (229)
T 1qwj_A 143 -QK-GVREVTEPLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI--EMG------------------------------- 187 (229)
T ss_dssp -CS-STTCCCCBSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH--HTT-------------------------------
T ss_pred -cc-cccccccccccccccccCCCCCCceEEEeeEEEEEEHHHh--ccc-------------------------------
Confidence 11 0001111 1111 112234567999999999887 210
Q ss_pred ccccccccccccCCceEEEEEcc-cchhhcCCccchhhcchHHH
Q 016989 228 VRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 228 ~~l~~d~l~~l~~~~~v~~~~~~-~~w~~i~t~~d~~~a~~~~l 270 (379)
+..+..+..+..+ ++|.+||||+||..++.++.
T Consensus 188 ----------~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~ 221 (229)
T 1qwj_A 188 ----------YLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVL 221 (229)
T ss_dssp ----------CSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHH
T ss_pred ----------cccCCeEEEEECCcccccCCCCHHHHHHHHHHHH
Confidence 0112334322444 68999999999999987664
No 38
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.75 E-value=6.2e-18 Score=149.71 Aligned_cols=214 Identities=16% Similarity=0.188 Sum_probs=130.6
Q ss_pred CCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcccCCc
Q 016989 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRI 78 (379)
Q Consensus 5 ~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~~~~~ 78 (379)
|++++.||||||| .|+||+. ..||+|+|++|+|||+|+++.+.+ |+|++......+.+++. ..++.
T Consensus 1 m~~~~~aiIlAaG--~g~R~~~---~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~---~~~~~ 72 (228)
T 2yc3_A 1 MEKSVSVILLAGG--QGKRMKM---SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYE---ESIDV 72 (228)
T ss_dssp CTTCEEEEEECCC--CC----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTT---TTSSS
T ss_pred CCcceEEEEECCc--cccccCC---CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHH---HhCCC
Confidence 4456899999999 9999984 679999999999999999999863 66766655433444332 23445
Q ss_pred cEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEE
Q 016989 79 PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELV 156 (379)
Q Consensus 79 ~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~ 156 (379)
++.++.. ..|..++++.+++.+.. ..+.+++++||.++ ..+++.+++.|.+.+ .++++.+.. + +...
T Consensus 73 ~v~~~~~--~~~~~~sv~~al~~~~~-~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~--~----~~~~ 141 (228)
T 2yc3_A 73 DLSFAIP--GKERQDSVYSGLQEIDV-NSELVCIHDSARPLVNTEDVEKVLKDGSAVG--AAVLGVPAK--A----TIKE 141 (228)
T ss_dssp EEEEECC--CSSHHHHHHHHHTTSCT-TCSEEEEEETTCTTCCHHHHHHHHHHHHHHS--EEEEEEECC--S----CCCC
T ss_pred cEEEECC--CCCHHHHHHHHHHhhcc-CCCEEEEecCCCccCCHHHHHHHHHHHHhcC--ceEEEEecc--c----eEEE
Confidence 5655542 36888999999988754 23578999999977 567999999887655 344444432 1 1112
Q ss_pred EeCCCCcEEEeeecCCCcccceeeeeEEEeCHhh-HHHhhccccccccchhhhhcchhhhhhhhcccccccccccccccc
Q 016989 157 ADPDTNELLHYTEKPETFVSDLINCGVYVFTPDI-FNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDIL 235 (379)
Q Consensus 157 ~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l 235 (379)
.++ ++.+..+.+++. ..... ..|+|+++. ++.+....... + |+ .+..
T Consensus 142 ~~~-~~~v~~~~~~~~---~~~~~-~~~~f~~~~l~~~~~~~~~~~----~--~~---------------------~~~~ 189 (228)
T 2yc3_A 142 VNS-DSLVVKTLDRKT---LWEMQ-TPQVIKPELLKKGFELVKSEG----L--EV---------------------TDDV 189 (228)
T ss_dssp BCT-TSCBCCCCSCCC---CEEEE-EEEEECHHHHHHHHHHHHHHT----C--CC---------------------CSTT
T ss_pred EcC-CCceEEecCccc---eEEEe-CCcEEEHHHHHHHHHHHHhcC----C--Cc---------------------ccHH
Confidence 232 345544333321 11223 489999764 45544221110 0 11 2333
Q ss_pred cccc-CCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 236 SPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 236 ~~l~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
..+. .+.++..+..+..|.+|+||+||..+.+++
T Consensus 190 ~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l 224 (228)
T 2yc3_A 190 SIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 224 (228)
T ss_dssp HHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHH
Confidence 3322 245666565556799999999999886554
No 39
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.74 E-value=1.8e-17 Score=146.04 Aligned_cols=207 Identities=15% Similarity=0.141 Sum_probs=135.5
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccch-HHHHHHHHhhcccCCccE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRIPV 80 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~-~~i~~~l~~~~~~~~~~i 80 (379)
++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.. |+|++.... ..+.+++. +..+
T Consensus 2 ~~~~vIlA~G--~g~R~~~---~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~------~~~v 70 (223)
T 2xwl_A 2 ATVAVVPAAG--SGERLRA---GRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG------GEDS 70 (223)
T ss_dssp CEEEEEECCC--CCGGGTS---SSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC------BTTE
T ss_pred ceEEEEECCc--cCcccCC---CCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc------cCCe
Confidence 4789999999 9999993 679999999999999999999863 666655443 23444331 2334
Q ss_pred EEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEe
Q 016989 81 RYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVAD 158 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d 158 (379)
.++.. ..+.+++++.+++.++. .+.+++++||.++ ..++.++++.+. .+.+.++++.+.. ++. .. .+
T Consensus 71 ~~~~~--~~~~~~~i~~al~~~~~--~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~--d~~--~~--~~ 139 (223)
T 2xwl_A 71 VIVSG--GVDRTESVALALEAAGD--AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPA--DTI--KA--VD 139 (223)
T ss_dssp EEEEC--CSSHHHHHHHHHTTCTT--CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCS--SCE--EE--EC
T ss_pred EEEcC--CCCHHHHHHHHHHhcCC--CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecc--cce--EE--Ec
Confidence 44433 24578899999888731 2579999999987 457999999883 2345666665542 222 22 24
Q ss_pred CCCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccccccc
Q 016989 159 PDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPL 238 (379)
Q Consensus 159 ~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l 238 (379)
++|++..+.+++.. ....+.|+|++..+..+.+... ++ |. .+....+
T Consensus 140 -~~g~~~~~~e~~~l----~~~~~p~~f~~~~l~~~~~~~~-----~~--~~---------------------~~~~~~~ 186 (223)
T 2xwl_A 140 -ANGAVLGTPERAGL----RAVQTPQGFHADVLRRAYARAT-----AG--GV---------------------TDDASLV 186 (223)
T ss_dssp -TTSBEEECCCGGGE----EEECSCEEEEHHHHHHHHTTCC-----SC--CC---------------------CCHHHHH
T ss_pred -CCCcEEeecChHHh----eeeeCCcccCHHHHHHHHHHhh-----CC--CC---------------------ccHHHHH
Confidence 36889888887521 1123467888776654432110 00 00 1112222
Q ss_pred c-CCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 239 A-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 239 ~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
. .+.++..+..++.|.+|+||+||..+..++
T Consensus 187 ~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l 218 (223)
T 2xwl_A 187 EQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL 218 (223)
T ss_dssp HTTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred HHcCCCEEEEECCcccccccCHHHHHHHHHHH
Confidence 2 135788888888999999999999886554
No 40
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.72 E-value=8.5e-17 Score=156.07 Aligned_cols=177 Identities=16% Similarity=0.244 Sum_probs=130.7
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeC-CcchhHHHHHhcCc-----------EEEEcccchHHHHHHHHhhcc
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR-----------IYLVGFYEEREFALYVSSISN 74 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~-g~pli~~~i~~l~~-----------iiv~~~~~~~~i~~~l~~~~~ 74 (379)
.++.+|||||| +||||+. ..||+|+||+ |+|||+|+++.+.. +++++.+..+.+++|++++ .
T Consensus 91 ~k~avViLAGG--~GTRmgs---~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~-~ 164 (488)
T 2i5k_A 91 SKLAVLKLNGG--LGTSMGC---VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKY-S 164 (488)
T ss_dssp GGEEEEEECCC--BSGGGTC---CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGG-C
T ss_pred CCceEEEEcCC--CcccCCC---CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhc-c
Confidence 46789999999 9999986 8899999999 99999999999764 3445546666789999873 4
Q ss_pred cCCccEEEecCC------------------------CCCChHHHHHHH-----HHhhccCCCCeEEEEcCCeee-cCChH
Q 016989 75 ELRIPVRYLRED------------------------KPHGSAGALYNF-----RDLIMEDNPSHIFLLNCDVCC-SFPLP 124 (379)
Q Consensus 75 ~~~~~i~~~~~~------------------------~~~g~~~al~~~-----~~~i~~~~~~~~lv~~gD~i~-~~dl~ 124 (379)
.+|.++.+..|. .+.|+++++... ++.+.....++++|++||++. ..|+.
T Consensus 165 ~fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~ 244 (488)
T 2i5k_A 165 ANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK 244 (488)
T ss_dssp SSSCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH
T ss_pred ccCceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH
Confidence 567777777555 678999998843 344532223689999999966 46786
Q ss_pred HHHHHHHhcCCceEEEEEEeCCCCCCc-eeEEEEeCCCCc--EEEeeecCCC--------cccceeeeeEEEeCHhhHHH
Q 016989 125 EMLDAHRNYGGMGTILVIKVSAESASQ-FGELVADPDTNE--LLHYTEKPET--------FVSDLINCGVYVFTPDIFNA 193 (379)
Q Consensus 125 ~~l~~~~~~~~~~ti~~~~~~~~~~~~-~g~v~~d~~~~~--v~~~~ekp~~--------~~~~~~~~Giy~~~~~~l~~ 193 (379)
++..|.++++++++.+.+.. ++.. ||.+..+ +|+ +..+.+.|.. ......|+|+|+|+.+.++.
T Consensus 245 -~L~~~~~~~a~~t~~v~~~~--~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f~~~~L~~ 319 (488)
T 2i5k_A 245 -ILNHMIETGAEYIMELTDKT--RADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKR 319 (488)
T ss_dssp -HHHHHHHSCCSEEEEEEECC--GGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEEEHHHHHH
T ss_pred -HHHHHHhcCCcEEEEEEEec--CCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcccccccCEEEEEEEEEeHHHHHH
Confidence 66888888999999888653 4544 9988775 455 3333334432 12467899999999877654
Q ss_pred h
Q 016989 194 I 194 (379)
Q Consensus 194 l 194 (379)
+
T Consensus 320 ~ 320 (488)
T 2i5k_A 320 L 320 (488)
T ss_dssp H
T ss_pred H
Confidence 4
No 41
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.70 E-value=8.1e-17 Score=139.23 Aligned_cols=184 Identities=14% Similarity=0.173 Sum_probs=122.2
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
+++.+|||||| .|+||++ ||+|+|++|+|||+|+++.+.. |+|++....+.+.+++. .+++++.
T Consensus 4 ~~~~~iIlA~G--~~~R~g~-----~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~----~~~~~~~ 72 (199)
T 2waw_A 4 SRVTGVVLAAG--YSRRLGT-----PKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVE----LDGLDIV 72 (199)
T ss_dssp CCEEEEEEESS--CCTTTTS-----CGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSC----CTTSEEE
T ss_pred CceEEEEECCC--CCCCCCC-----CEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhc----cCCCEEE
Confidence 45899999999 9999975 9999999999999999999865 66666554444555553 2355554
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeC
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADP 159 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~ 159 (379)
+. +....|++++++.+++.+.. ..+.+++++||.++ ..++.++++. +.++++++...
T Consensus 73 ~~-~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~----------------- 131 (199)
T 2waw_A 73 LV-DDAGLGCSSSLKSALTWVDP-TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY----------------- 131 (199)
T ss_dssp EC-CCCCTTCCCHHHHHHHTSCT-TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE-----------------
T ss_pred EC-CCcccCHHHHHHHHHHhhhc-cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec-----------------
Confidence 42 34457889999999988742 13579999999998 5678888886 44444332211
Q ss_pred CCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhcccccccccccccccccccc
Q 016989 160 DTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (379)
Q Consensus 160 ~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 239 (379)
+++- ..-++|+++.+..+..... .. .. ..++...
T Consensus 132 -~g~~----------------~~P~~~~~~~l~~~~~~~~-~~-----------------------~~----~~~l~~~- 165 (199)
T 2waw_A 132 -ANGI----------------GHPFWVSRGVFGDLAELHG-DK-----------------------GV----WRLIESG- 165 (199)
T ss_dssp -TTEE----------------EEEEEEEGGGHHHHHTCSS-TT-----------------------CH----HHHHHSS-
T ss_pred -CCcc----------------cCCEEEcHHHHHHHHhcCC-CH-----------------------HH----HHHHHhC-
Confidence 1110 0114788888776653210 00 00 1222221
Q ss_pred CCceEEEEEc-ccchhhcCCccchhhcchHH
Q 016989 240 GKKQLYTYET-MDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 240 ~~~~v~~~~~-~~~w~~i~t~~d~~~a~~~~ 269 (379)
+.++..+.. .+.|.+|+||+||..+.+++
T Consensus 166 -~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 166 -RHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp -SSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred -cccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 245766766 45899999999999886654
No 42
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.67 E-value=1.3e-16 Score=137.80 Aligned_cols=110 Identities=17% Similarity=0.233 Sum_probs=80.9
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVR 81 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~ 81 (379)
+++.+|||||| .|+||.+ ||+|+|++|+|||+|+++.+.. |+|++....+.+.+++.. +++++.
T Consensus 4 ~~~~~iIlA~G--~~~R~g~-----~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~~~~~ 72 (197)
T 2wee_A 4 TQITGVVLAAG--RSNRLGT-----PKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL----DGTDVV 72 (197)
T ss_dssp SEEEEEEEECC--CCTTTSS-----CGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC----TTSEEE
T ss_pred CceEEEEECCC--CcccCCC-----CeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc----CCCEEE
Confidence 45899999999 9999964 9999999999999999999864 666655444445555532 345543
Q ss_pred EecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHH
Q 016989 82 YLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDA 129 (379)
Q Consensus 82 ~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~ 129 (379)
.. +....|++++++.+++.+.. ..+.+++++||.++ ..+++++++.
T Consensus 73 ~~-~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 73 VV-EDVERGCAASLRVALARVHP-RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EC-C----CCHHHHHHHHTTSCT-TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred EC-CCcccCHHHHHHHHHHHhcc-cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 32 33456999999999988731 12479999999987 5668888886
No 43
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.66 E-value=6.3e-16 Score=137.48 Aligned_cols=218 Identities=15% Similarity=0.166 Sum_probs=127.3
Q ss_pred CCCCCCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcc
Q 016989 1 MGSSEDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISN 74 (379)
Q Consensus 1 m~~~~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~ 74 (379)
|...| +++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.. |+|++....+.+.+ +..
T Consensus 1 ~~~~~-~~~~~iIlA~G--~g~R~~~---~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~--- 70 (236)
T 1i52_A 1 MATTH-LDVCAVVPAAG--FGRRMQT---ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL--- 70 (236)
T ss_dssp ----C-CCEEEEEEECC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG---
T ss_pred CCCCC-CceeEEEECCc--CccccCC---CCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh---
Confidence 55555 45899999999 9999983 579999999999999999999863 66665543322333 221
Q ss_pred cCCc-cEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCc
Q 016989 75 ELRI-PVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQ 151 (379)
Q Consensus 75 ~~~~-~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~ 151 (379)
++. .+.++.. ..|..++++.+++.+.. .+.+++++||.++ ...+..+++.+.+.++.. +++.+.. +.
T Consensus 71 -~~~~~v~~~~~--~~g~~~~i~~al~~~~~--~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~--~~-- 140 (236)
T 1i52_A 71 -ANHPQITVVDG--GDERADSVLAGLKAAGD--AQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVR--DT-- 140 (236)
T ss_dssp -GGCTTEEEEEC--CSSHHHHHHHHHHTSTT--CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECC--SC--
T ss_pred -cCCCCEEEECC--CCCHHHHHHHHHHhcCC--CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecc--cc--
Confidence 222 3444432 25888999999888742 2579999999987 456888888776554223 3333331 11
Q ss_pred eeEEEEeCCCCcEEEeeecCCCcccceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhhhhhccccccccccc
Q 016989 152 FGELVADPDTNELLHYTEKPETFVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRL 230 (379)
Q Consensus 152 ~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (379)
+. ..+++++++....+. ..-+..-+.++|+.+.+ +.+...... +. +++ +.
T Consensus 141 ~~--~~~~~~~~i~~~~~~----~~i~~~~~p~~f~~~~l~~~~~~~~~~---g~---~~t--------------d~--- 191 (236)
T 1i52_A 141 MK--RAEPGKNAIAHTVDR----NGLWHALTPQFFPRELLHDCLTRALNE---GA---TIT--------------DE--- 191 (236)
T ss_dssp EE--EECTTSSSEEEEECC----TTCEEEEEEEEEEHHHHHHHHHHHHHT---TC---CCC--------------SH---
T ss_pred EE--EEcCCCCceeeccCh----HhheeeeCCceecHHHHHHHHHHHHhc---CC---Ccc--------------cH---
Confidence 11 123211455433211 11122225567776544 433321100 00 000 00
Q ss_pred cccccccccCCceEEEEEcccchhhcCCccchhhcchHHH
Q 016989 231 DQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 231 ~~d~l~~l~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l 270 (379)
..++..+ +.++..+..++.|.+|+||+||..+.+++.
T Consensus 192 -~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~ 228 (236)
T 1i52_A 192 -ASALEYC--GFHPQLVEGRADNIKVTRPEDLALAEFYLT 228 (236)
T ss_dssp -HHHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHC
T ss_pred -HHHHHHc--CCCEEEEecCccccccCCHHHHHHHHHHHH
Confidence 1122111 356777777778999999999998876553
No 44
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.65 E-value=2.8e-15 Score=133.02 Aligned_cols=207 Identities=15% Similarity=0.166 Sum_probs=124.2
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHH-HHHHHHhhcccCCccE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEERE-FALYVSSISNELRIPV 80 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~-i~~~l~~~~~~~~~~i 80 (379)
.+.||||||| .|+||+. ..||+|+|++|+|||+|+++.+.+ |+|++...... +.+++ . ++.++
T Consensus 13 ~~~aiILAaG--~s~Rm~~---~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~----~-~~~~~ 82 (234)
T 1vpa_A 13 MNVAILLAAG--KGERMSE---NVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRV----F-HEKVL 82 (234)
T ss_dssp CEEEEEEECC--CCGGGCC---SSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTC----C-CTTEE
T ss_pred cCeEEEEcCc--chhhcCC---CCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHh----c-cCCce
Confidence 4799999999 9999985 679999999999999999999863 66666544322 23222 1 22233
Q ss_pred EEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEe
Q 016989 81 RYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVAD 158 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d 158 (379)
... ....+..++++.+++.+.....+.+++++||.|+ ...+.++++.+.+.+ ..+++.+.. +. ....+
T Consensus 83 ~~~--~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~~~~~~--~~----~~~~~ 152 (234)
T 1vpa_A 83 GIV--EGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATLALKNS--DA----LVRVE 152 (234)
T ss_dssp EEE--ECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEEEEECC--SE----EEEEE
T ss_pred EEe--CCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEEecC--Cc----EEEEC
Confidence 222 1223477889998888743112568899999987 557899998876654 334344431 11 22234
Q ss_pred CCCCcEEEeeecCCCcccceeeeeEEEeCHhhHHHhhccccccccchhhhhcchhhhhhhhccccccccccccccccccc
Q 016989 159 PDTNELLHYTEKPETFVSDLINCGVYVFTPDIFNAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPL 238 (379)
Q Consensus 159 ~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l 238 (379)
. +| + .+.++. .-+..-.-++|+++.+..+.... + |.+ +. ..++...
T Consensus 153 ~-~g-v-~~~~r~----~~~~~~~p~~f~~~~l~~~~~~~-------~--~~~--------------~~----~~~~~~~ 198 (234)
T 1vpa_A 153 N-DR-I-EYIPRK----GVYRILTPQAFSYEILKKAHENG-------G--EWA--------------DD----TEPVQKL 198 (234)
T ss_dssp T-TE-E-EEECCT----TEEEEEEEEEEEHHHHHHHHTTC-------C--CCS--------------SS----HHHHHTT
T ss_pred C-CC-c-ccCChh----HeeeecCCccccHHHHHHHHHhc-------C--CCC--------------cH----HHHHHHc
Confidence 2 45 5 554431 11111133477776654432210 0 000 00 1112111
Q ss_pred cCCceEEEEEcccchhhcCCccchhhcchHHH
Q 016989 239 AGKKQLYTYETMDFWEQIKTPGMSLKCSGLYL 270 (379)
Q Consensus 239 ~~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~l 270 (379)
+.++..+..++.|.+|+||+||..+.+++.
T Consensus 199 --g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 228 (234)
T 1vpa_A 199 --GVKIALVEGDPLCFKVTFKEDLELARIIAR 228 (234)
T ss_dssp --TCCCEEEECCGGGCCCCSTTHHHHHHHHHH
T ss_pred --CCcEEEEECCchhcCCCCHHHHHHHHHHHh
Confidence 345666666778999999999998876553
No 45
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.63 E-value=7.9e-16 Score=133.03 Aligned_cols=112 Identities=14% Similarity=0.139 Sum_probs=81.2
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc--EEEEcccchHHHHHHHHhhcccCCccEEEecCC
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR--IYLVGFYEEREFALYVSSISNELRIPVRYLRED 86 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~--iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~~~~ 86 (379)
+.+|||||| .|+||++ ||+|+|++|+|||+|+++.+.. ++|++....+.+.+++. .++ +.. ...
T Consensus 3 ~~~iIlAgG--~g~Rmg~-----~K~l~~i~g~pll~~~l~~l~~~~ivvv~~~~~~~~~~~~~-----~~~-~v~-~~~ 68 (197)
T 3d5n_A 3 IGVIILAAG--EGKRFGG-----DKLLAKIDNTPIIMRTIRIYGDLEKIIIVGKYVNEMLPLLM-----DQI-VIY-NPF 68 (197)
T ss_dssp EEEEEECSC--CTTCCCS-----SGGGSBSSSSBHHHHHHHHTTTSBCCEEECTTHHHHGGGCT-----TSC-EEE-CTT
T ss_pred eEEEEECCc--CcccCCC-----CeeeCEeCceEHHHHHHHHHHhCCEEEEECCCHHHHHHHhc-----CCE-EEE-CCC
Confidence 789999999 9999986 9999999999999999999986 55544443333333322 234 322 223
Q ss_pred CCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCce
Q 016989 87 KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMG 137 (379)
Q Consensus 87 ~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ 137 (379)
...|++++++.+++.+.. .+.+++++||.++ ...++++++.+ +.++++
T Consensus 69 ~~~G~~~si~~al~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 69 WNEGISTSLKLGLRFFKD--YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp GGGCHHHHHHHHHHHTTT--SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred CCCCHHHHHHHHHHhhcc--CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 346999999999988853 2479999999987 45578888766 444443
No 46
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.63 E-value=5e-15 Score=144.25 Aligned_cols=181 Identities=13% Similarity=0.211 Sum_probs=134.5
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCcee---CCcchhHHHHHhcCc-----------------EEEEcccchHHHH
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL---GGQPMVHHPISACKR-----------------IYLVGFYEEREFA 66 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi---~g~pli~~~i~~l~~-----------------iiv~~~~~~~~i~ 66 (379)
.++.+|||||| .||||+. ..||+|+|| .|+|+|+++++.+.. ++++.....+.++
T Consensus 101 ~kvavViLAGG--~GTRLg~---~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~ 175 (505)
T 1jv1_A 101 NKVAVLLLAGG--QGTRLGV---AYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTK 175 (505)
T ss_dssp TCEEEEEECCC--CCCTTSC---SSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHH
T ss_pred CceEEEEEcCC--ccccCCC---CCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHH
Confidence 46899999999 9999975 889999999 799999999887421 5556666566799
Q ss_pred HHHHhhcccCCc---cEEEecC---------------------CCCCChHHHHHHHHH-----hhccCCCCeEEEEcCCe
Q 016989 67 LYVSSISNELRI---PVRYLRE---------------------DKPHGSAGALYNFRD-----LIMEDNPSHIFLLNCDV 117 (379)
Q Consensus 67 ~~l~~~~~~~~~---~i~~~~~---------------------~~~~g~~~al~~~~~-----~i~~~~~~~~lv~~gD~ 117 (379)
+|+++. ..+|+ +|.+..| ..+.|+++.+..+.. .+.....++++|+++|+
T Consensus 176 ~~f~~~-~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn 254 (505)
T 1jv1_A 176 EFFTKH-KYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDN 254 (505)
T ss_dssp HHHHHT-GGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTB
T ss_pred HHHHhh-hhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCc
Confidence 999873 45676 3665543 257899988876542 22222236899999999
Q ss_pred e-ecCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCCCCc--EEEeeecCCC----------cccceeeeeEE
Q 016989 118 C-CSFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDTNE--LLHYTEKPET----------FVSDLINCGVY 184 (379)
Q Consensus 118 i-~~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~~--v~~~~ekp~~----------~~~~~~~~Giy 184 (379)
+ ...+...++..|..+++++++.+.+.. .....+|.+..+ +|+ ++.+.|+|.. ...++.|+|+|
T Consensus 255 ~L~~~~d~~~lg~~~~~~~~~~~~v~~k~-~~~e~~Gvl~~~--dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~ 331 (505)
T 1jv1_A 255 ILVKVADPRFIGFCIQKGADCGAKVVEKT-NPTEPVGVVCRV--DGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANH 331 (505)
T ss_dssp TTCCTTCHHHHHHHHHTTCSEEEEEEECC-STTCSCCEEEEE--TTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEE
T ss_pred cccccchHHHHHHHHHcCCCEEEEEEEcc-CCccCcceEEEE--CCeEEEEEEeeCCHHHhhhcccccccccceeeEEEE
Confidence 7 577777899999999999998887632 357888988876 354 4556666541 12468999999
Q ss_pred EeCHhhHHHhhc
Q 016989 185 VFTPDIFNAIQG 196 (379)
Q Consensus 185 ~~~~~~l~~l~~ 196 (379)
+|+.++++.+.+
T Consensus 332 ~f~l~~L~~i~~ 343 (505)
T 1jv1_A 332 FFTVPFLRDVVN 343 (505)
T ss_dssp EEEHHHHHHHHH
T ss_pred EecHHHHHHHHH
Confidence 999998887754
No 47
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.62 E-value=5e-16 Score=134.71 Aligned_cols=103 Identities=21% Similarity=0.296 Sum_probs=76.1
Q ss_pred CCCceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc----EEEEcccchHHHHHHHHhhcccCCccE
Q 016989 5 EDDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPV 80 (379)
Q Consensus 5 ~~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~----iiv~~~~~~~~i~~~l~~~~~~~~~~i 80 (379)
+++++.+|||||| .|+||+ .||+|+|++|+|||+|+++.+.. |+|++..... +++ . ++++
T Consensus 11 ~~~~~~~iILA~G--~g~Rmg-----~~K~ll~i~g~pll~~~l~~l~~~~~~i~vv~~~~~~---~~~---~---~~~~ 74 (201)
T 2e8b_A 11 LSKVNTCYVLAGG--KSKRFG-----EDKLLYEIKGKKVIERVYETAKSVFKEVYIVAKDREK---FSF---L---NAPV 74 (201)
T ss_dssp SCSCCEEEEEEES--SCCCCS-----TTHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCSGG---GGG---G---TCCE
T ss_pred cccCceEEEECCC--CCccCC-----CCcccceECceEHHHHHHHHHHHhCCEEEEEeCcHHH---hhc---C---CceE
Confidence 4456799999999 999998 49999999999999999999875 6666554332 111 1 3444
Q ss_pred EEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-c-CChHH-HH
Q 016989 81 RYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-S-FPLPE-ML 127 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~-~dl~~-~l 127 (379)
.. .+....|++++++.+.+.+.. +.+++++||.++ + ..++. ++
T Consensus 75 v~-~~~~~~g~~~~i~~al~~~~~---~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 75 VL-DEFEESASIIGLYTALKHAKE---ENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EE-CCCSSCCHHHHHHHHHHHCSS---SEEEEEETTCTTCCHHHHHHHHH
T ss_pred Ee-cCCCCCCcHHHHHHHHHHcCC---CCEEEEeCCcCcCCHHHHHHHHh
Confidence 22 233457999999999988753 479999999988 3 33555 55
No 48
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.60 E-value=1.9e-14 Score=127.08 Aligned_cols=211 Identities=15% Similarity=0.176 Sum_probs=134.5
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccch-HHHHHHHHhhcccCCccE
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEE-REFALYVSSISNELRIPV 80 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~-~~i~~~l~~~~~~~~~~i 80 (379)
.+.+|||||| .|+||+. ..||+|++++|+|||+|+++.+.+ |+|++.... +.+++++.. .+
T Consensus 7 ~~~aIIlAaG--~g~Rmg~---~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~-------~v 74 (231)
T 3q80_A 7 EVVAIVPAAG--SGERLAV---GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-------RA 74 (231)
T ss_dssp CEEEEEECCC--CCTTTCS---SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG-------GC
T ss_pred ceEEEEECCC--CCccCCC---CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC-------Ce
Confidence 3789999999 9999986 789999999999999999999863 666655443 334444432 23
Q ss_pred EEecCCCCCChHHHHHHHHHhhccC-CCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEE
Q 016989 81 RYLREDKPHGSAGALYNFRDLIMED-NPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVA 157 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~~-~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~ 157 (379)
.++. ...+..++++.+++.+... ..+.++++.||.|+ ...+.++++.+.+ +.++.+++.+.. ++- + ..
T Consensus 75 ~~v~--gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~--dt~--~--~~ 145 (231)
T 3q80_A 75 MIVA--GGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLS--DTI--K--AV 145 (231)
T ss_dssp EEEE--CCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCS--SCE--E--EE
T ss_pred EEEc--CCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEecc--CCE--E--EE
Confidence 3333 2234578999999888642 13689999999999 5668999998765 245666666653 222 1 23
Q ss_pred eCCCCcEEEeeecCCCcccceeeeeEEEeCHhhH-HHhhccccccccchhhhhcchhhhhhhhccccccccccccccccc
Q 016989 158 DPDTNELLHYTEKPETFVSDLINCGVYVFTPDIF-NAIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILS 236 (379)
Q Consensus 158 d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~ 236 (379)
+ +++.|..+.+.. .-..+.+ -+.|+.+.+ +.+......+ ++ + |+| |...
T Consensus 146 ~-~~g~v~~~~~r~---~l~~~qT-Pq~F~~~~L~~a~~~~~~~n-~~-~--~~T---------------------D~~~ 195 (231)
T 3q80_A 146 D-ANGVVLGTPERA---GLRAVQT-PQGFTTDLLLRSYQRGSLDL-PA-A--EYT---------------------DDAS 195 (231)
T ss_dssp C-TTSBEEECCCGG---GEEEECS-CEEEEHHHHHHHHHHHTC---------CCS---------------------SSHH
T ss_pred c-CCCcEEEecchh---heEEEcC-CcEEEHHHHHHHHHHHHhhc-CC-C--CCC---------------------cHHH
Confidence 4 367777655431 1112233 478887654 4544332211 11 1 222 2222
Q ss_pred ccc-CCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 237 PLA-GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 237 ~l~-~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
.+. .+.++..++-+..+..|.+|+|+..+..++
T Consensus 196 ~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 196 LVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp HHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 222 256777777766789999999998886544
No 49
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.59 E-value=3.5e-15 Score=132.70 Aligned_cols=201 Identities=13% Similarity=0.112 Sum_probs=117.6
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc----EEEEcccchHHHHHHHHhhcccCCccEEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
|++.||||||| .|+||++ . ||+|+|++|+|||+|+++. .. |+|++.. . +.+ +. ..+ +.+
T Consensus 24 M~~~aiILAgG--~s~Rm~~---~-~K~l~~i~gkpli~~~l~~-~~~~~~ivvv~~~-~--~~~-~~----~~~--v~~ 86 (236)
T 2px7_A 24 MEVSVLIPAAG--NGLRLGR---G-PKAFLQVGGRTLLEWTLAA-FRDAAEVLVALPP-G--AEP-PK----GLG--AVF 86 (236)
T ss_dssp CCCEEEEECCC------------C-CGGGCBCSSSBHHHHHHHH-TTTCSEEEEEECT-T--CCC-CT----TCS--CEE
T ss_pred CceEEEEEcCC--CCccCCC---C-CCeEEEECCEEHHHHHHHh-cCCCCeEEEEeCH-H--HHH-hh----cCC--cEE
Confidence 45679999999 9999986 5 9999999999999999998 44 6666553 1 111 11 112 334
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCC
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD 160 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~ 160 (379)
+.. ..|...+++.+++.+.. +.+++++||.++ ...+..+++.+.+.+ ..+++.+.. ++. . ..+
T Consensus 87 ~~~--~~~~~~~i~~al~~~~~---~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~--~~~--~--~~~-- 151 (236)
T 2px7_A 87 LEG--GATRQASVARLLEAASL---PLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPVP--DTL--M--APE-- 151 (236)
T ss_dssp EEC--CSSHHHHHHHHHHHCCS---SEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEECC--SEE--E--EEC--
T ss_pred EeC--CCchHHHHHHHHHHcCC---CeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEecC--CcE--E--Eec--
Confidence 432 34688899999887752 579999999987 456899998876653 344444431 111 1 123
Q ss_pred CCcEEEeeecCCCcccceeeeeEEEeCHhhHH-Hhhccccccccchhhhhcchhhhhhhhcccccccccccccccccccc
Q 016989 161 TNELLHYTEKPETFVSDLINCGVYVFTPDIFN-AIQGVSSQRKDRENLRRVSSFEALQSATRNLTTDFVRLDQDILSPLA 239 (379)
Q Consensus 161 ~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 239 (379)
+|++..+.++.. ..... ..++|+++.+. .+...... + + |+++ . ..++..
T Consensus 152 ~G~v~~~~~~~~---~~~~~-~~~~f~~~~l~~~~~~~~~~---g-~--~~~d--------------~----~~ll~~-- 201 (236)
T 2px7_A 152 GEAYGRVVPREA---FRLVQ-TPQGFFTALLREAHAYARRK---G-L--EASD--------------D----AQLVQA-- 201 (236)
T ss_dssp SSSCEEEECGGG---CEEEC-SCEEEEHHHHHHHHHHHHHH---T-C--CCSS--------------H----HHHHHH--
T ss_pred CCeEEecCChHh---hcccc-CCeEEcHHHHHHHHHHHHhc---C-C--Cchh--------------H----HHHHHH--
Confidence 567766555321 11122 35677877553 33321100 0 0 0010 0 112221
Q ss_pred CCceEEEEEcccchhhcCCccchhhcchHH
Q 016989 240 GKKQLYTYETMDFWEQIKTPGMSLKCSGLY 269 (379)
Q Consensus 240 ~~~~v~~~~~~~~w~~i~t~~d~~~a~~~~ 269 (379)
.+.++..+..++.|.+|+||+||..+.+++
T Consensus 202 ~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 231 (236)
T 2px7_A 202 LGYPVALVEGEATAFKITHPQDLVLAEALA 231 (236)
T ss_dssp TTCCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred cCCcEEEEECCccccCCCCHHHHHHHHHHH
Confidence 134677777777899999999999886554
No 50
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.57 E-value=1.9e-15 Score=143.51 Aligned_cols=74 Identities=8% Similarity=0.047 Sum_probs=48.7
Q ss_pred EEEEcCCeeecC--ChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCC-CCcEEEeeecCCCccc-ceeeeeEEE
Q 016989 110 IFLLNCDVCCSF--PLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPD-TNELLHYTEKPETFVS-DLINCGVYV 185 (379)
Q Consensus 110 ~lv~~gD~i~~~--dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~-~~~v~~~~ekp~~~~~-~~~~~Giy~ 185 (379)
=|+-.+|+++.+ +|.++++.|. +++.. .+++..+|+..++.. +++| .|.|||+.... .+.++|+|+
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~~~~~~aGiyI 82 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKHLKSSEAGAII 82 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHHHHTCCCSEEE
T ss_pred CcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhhhhcCCcEEEE
Confidence 466679999975 8999999885 35543 246778888777642 3566 99999985433 567999999
Q ss_pred eCHhhHHH
Q 016989 186 FTPDIFNA 193 (379)
Q Consensus 186 ~~~~~l~~ 193 (379)
|++++++.
T Consensus 83 ~~~~~l~~ 90 (374)
T 2iu8_A 83 ISRTQFQK 90 (374)
T ss_dssp EEHHHHHT
T ss_pred eChhHhhh
Confidence 99988753
No 51
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=4.2e-15 Score=128.26 Aligned_cols=124 Identities=19% Similarity=0.244 Sum_probs=84.6
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----EEEEcccchHHHHHHHHhhcccCCccEEEe
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----IYLVGFYEEREFALYVSSISNELRIPVRYL 83 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~ 83 (379)
|+||||||| .|+||++ .||+|+|++|+|||+|+++.+.+ |+|++....+.+.+++... ..+...+.++
T Consensus 1 m~aiIlA~G--~s~R~~~----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~-~~~~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGG--KGTRMGG----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSA-YKDYKNIVVI 73 (196)
T ss_dssp CEEEEEC------CGGGG----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHH-TTTTTEEEE-
T ss_pred CEEEEECCC--CCCcCCC----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhh-ccCCCCEEEE
Confidence 589999999 9999997 79999999999999999999875 7777765555688888652 1111234333
Q ss_pred cCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHh-----cCCceEEEEEEe
Q 016989 84 REDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRN-----YGGMGTILVIKV 144 (379)
Q Consensus 84 ~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~-----~~~~~ti~~~~~ 144 (379)
. ....|++++++.+++.+ . +.+++++||.++ ..+++++++.+.+ .+.+..+.+.+.
T Consensus 74 ~-~~~~g~~~si~~al~~~-~---~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~ 136 (196)
T 3rsb_A 74 D-TSGKGYIEDLNECIGYF-S---EPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPK 136 (196)
T ss_dssp --------CCCCCTTTTTC-S---SCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEET
T ss_pred E-CCCCCcHHHHHHHHHhC-C---CCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEc
Confidence 3 34668888888888877 2 469999999988 5679999999876 555555555554
No 52
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.54 E-value=7.9e-14 Score=121.23 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=82.8
Q ss_pred eEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc--EEEEcccchHHHHHHHHhhcccCCccEEEecCC
Q 016989 9 VVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR--IYLVGFYEEREFALYVSSISNELRIPVRYLRED 86 (379)
Q Consensus 9 ~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~--iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~~~~ 86 (379)
|.+|||||| .|+||+. ||+|+|++|+|||+|+++.+.. |+|++... +.+..+. ..+++++... ..
T Consensus 1 m~aiILAgG--~s~Rmg~-----~K~ll~~~G~pli~~~~~~l~~~~vvvv~~~~-~~~~~~~----~~~~~~~v~d-~~ 67 (208)
T 3ngw_A 1 MKVAVLVGG--VGRRIGM-----EKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDE-KQAEKLS----SRYEAEFIWD-LH 67 (208)
T ss_dssp CEEEEECCC--CCTTTTS-----CGGGCEETTEEHHHHHHHHHTTSEEEEECSSH-HHHHHHH----TTSCSCEECC-TT
T ss_pred CEEEEECCC--chhhCCC-----CCcccEECCeeHHHHHHHHhcCCCEEEEECCH-HHHHHHH----HhcCCeEEec-CC
Confidence 589999999 9999984 9999999999999999999986 67666543 2233322 2245554332 22
Q ss_pred CCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEE
Q 016989 87 KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTI 139 (379)
Q Consensus 87 ~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti 139 (379)
...|...+++.+++.+ . +.+ +++||+|+ ...+..+++.+.+.++++++
T Consensus 68 ~~~G~~~si~~gl~~~-~---~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 68 KGVGSIAGIHAALRHF-G---SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp CCCSHHHHHHHHHHHH-S---SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCChHHHHHHHHHHc-C---CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 3458889999999888 3 467 99999998 44578888877654555433
No 53
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.49 E-value=1.1e-13 Score=119.78 Aligned_cols=106 Identities=16% Similarity=0.225 Sum_probs=79.1
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc----EEEEcccchHHHHHHHHhhcccCCccEEE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR----IYLVGFYEEREFALYVSSISNELRIPVRY 82 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~----iiv~~~~~~~~i~~~l~~~~~~~~~~i~~ 82 (379)
+++.+|||||| .|+||+ ..||+|+|++|+|||+|+++.+.. |+|++....+. +. .+++++..
T Consensus 5 m~~~~iILAgG--~s~Rmg----~~~K~ll~i~G~pli~~~l~~l~~~~~~ivvv~~~~~~~---~~-----~~~~~~v~ 70 (201)
T 1e5k_A 5 TTITGVVLAGG--KARRMG----GVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEI---YQ-----ASGLKVIE 70 (201)
T ss_dssp CSEEEEEECCC--CCSSSC----SSCGGGSEETTEEHHHHHHHHHHHHCSCEEEECSSSHHH---HH-----TTSCCEEC
T ss_pred CcceEEEEcCC--CCCcCC----CCCCceeeECceeHHHHHHHHHHhhCCEEEEEcCCcHHH---Hh-----hcCCeEEe
Confidence 56899999999 999998 259999999999999999999865 77776654332 21 13454422
Q ss_pred ecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-c-CChHHHHHH
Q 016989 83 LREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-S-FPLPEMLDA 129 (379)
Q Consensus 83 ~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~-~dl~~~l~~ 129 (379)
.......|++++++.+++.+.. +.+++++||.++ . ..++.+++.
T Consensus 71 ~~~~~~~G~~~si~~~l~~~~~---~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 71 DSLADYPGPLAGMLSVMQQEAG---EWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp CCTTCCCSHHHHHHHHHHHCCS---SEEEEEETTCTTCCTTHHHHHHHT
T ss_pred cCCCCCCCHHHHHHHHHHhCCC---CcEEEEeCCcCcCCHHHHHHHHhh
Confidence 2222336999999999988753 479999999977 4 447888765
No 54
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.47 E-value=5.2e-13 Score=129.34 Aligned_cols=178 Identities=13% Similarity=0.111 Sum_probs=124.8
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeC-CcchhHHHHHhcCc-----------EEEEcccchHHHHHHHH-hhcc
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR-----------IYLVGFYEEREFALYVS-SISN 74 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~-g~pli~~~i~~l~~-----------iiv~~~~~~~~i~~~l~-~~~~ 74 (379)
++.+|||||| +||||+. ..||+|+||+ |+|+|++.++.+.. ++.+..+..+.+++|++ +. .
T Consensus 75 k~avViLAGG--lGTRLg~---~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~-~ 148 (505)
T 2oeg_A 75 STVVLKLNGG--LGTGMGL---CDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARY-P 148 (505)
T ss_dssp TEEEEEEECC--CCGGGTC---CSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHC-H
T ss_pred cceEEEEcCC--cccccCC---CCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhh-h
Confidence 6789999999 9999994 8899999999 99999999999874 45555665667899997 53 3
Q ss_pred cCCc---cEE-E---------------e-------cCCCCCChHHHHHHH-----HHhhccCCCCeEEEEcCCeee-cCC
Q 016989 75 ELRI---PVR-Y---------------L-------REDKPHGSAGALYNF-----RDLIMEDNPSHIFLLNCDVCC-SFP 122 (379)
Q Consensus 75 ~~~~---~i~-~---------------~-------~~~~~~g~~~al~~~-----~~~i~~~~~~~~lv~~gD~i~-~~d 122 (379)
.+|+ +|. | + .+..+.|+++.+... ++.+.....++++|+++|++. ..|
T Consensus 149 ~fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D 228 (505)
T 2oeg_A 149 WLYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATID 228 (505)
T ss_dssp HHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCC
T ss_pred ccCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccC
Confidence 3455 232 2 0 112356999888754 343322223589999999987 467
Q ss_pred hHHHHHHHHhcCCceEEEEEEeCCCCC-CceeEEEEeC-----CCCc---------EEEeeecCCC--------ccccee
Q 016989 123 LPEMLDAHRNYGGMGTILVIKVSAESA-SQFGELVADP-----DTNE---------LLHYTEKPET--------FVSDLI 179 (379)
Q Consensus 123 l~~~l~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~d~-----~~~~---------v~~~~ekp~~--------~~~~~~ 179 (379)
+ .++..|.++++++++.+.+.. .+ ..+|.+..+. .+|+ ++.+.+-|.. ..-.+.
T Consensus 229 ~-~llg~~~~~~ad~~~~v~~k~--~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~~ 305 (505)
T 2oeg_A 229 K-RVLAYMEKEKIDFLMEVCRRT--ESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESFQDINKYSFF 305 (505)
T ss_dssp H-HHHHHHHHHTCSEEEEEEECC--TTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCEE
T ss_pred H-HHHHHHHhcCCcEEEEEEEec--CCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcccCccccCee
Confidence 7 899999999999999888764 33 4678776621 2466 3444443332 123457
Q ss_pred eeeEEEeCHhhHHHh
Q 016989 180 NCGVYVFTPDIFNAI 194 (379)
Q Consensus 180 ~~Giy~~~~~~l~~l 194 (379)
++..++|+-+.++.+
T Consensus 306 Ninn~~~~l~~l~~~ 320 (505)
T 2oeg_A 306 NTNNLWIRLPVLLET 320 (505)
T ss_dssp EEEEEEEEHHHHHHH
T ss_pred EEEEEEEEHHHHHHH
Confidence 999999997766544
No 55
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.43 E-value=3.6e-13 Score=126.81 Aligned_cols=116 Identities=12% Similarity=0.221 Sum_probs=84.2
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc------EEEEcccchHHHHHHHHhhcccCCccE
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR------IYLVGFYEEREFALYVSSISNELRIPV 80 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~------iiv~~~~~~~~i~~~l~~~~~~~~~~i 80 (379)
+++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.+ |+|++. ..+.+.+++ .. +
T Consensus 2 mki~aIILAaG--~ssRmg~---~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~----~~----v 67 (371)
T 1w55_A 2 SEMSLIMLAAG--NSTRFNT---KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFT----KN----Y 67 (371)
T ss_dssp CCEEEEEECCS--CCTTTCS---SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTC----SS----S
T ss_pred CccEEEEECCC--CCccCCC---CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHh----CC----C
Confidence 45899999999 9999985 679999999999999999999863 666666 333333222 11 3
Q ss_pred EEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHHHHHhcCCceEEEEEE
Q 016989 81 RYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLDAHRNYGGMGTILVIK 143 (379)
Q Consensus 81 ~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~~~~~~~~~~ti~~~~ 143 (379)
.++. ...|..++++.+++.+. .+.+++++||.|+ ...++++++.+.+.+ .++.+.+
T Consensus 68 ~~v~--~g~g~~~sv~~aL~~l~---~d~vlv~~~D~Pli~~~~i~~li~~~~~~~--a~i~~~~ 125 (371)
T 1w55_A 68 EFIE--GGDTRAESLKKALELID---SEFVMVSDVARVLVSKNLFDRLIENLDKAD--CITPALK 125 (371)
T ss_dssp EEEE--CCSSHHHHHHHHHTTCC---SSEEEEEETTCTTCCHHHHHHHHTTGGGCS--EEEEEEC
T ss_pred EEEe--CCCChHHHHHHHHHhcC---CCeEEEEeCCcccCCHHHHHHHHHHHHhcC--CEEEEEE
Confidence 3332 24578899999988775 2579999999988 456888888776543 4444444
No 56
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.36 E-value=1.5e-11 Score=115.54 Aligned_cols=181 Identities=16% Similarity=0.250 Sum_probs=131.4
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCcee---CCcchhHHHHHhcC-------------c-----EEEEcccchHHH
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL---GGQPMVHHPISACK-------------R-----IYLVGFYEEREF 65 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi---~g~pli~~~i~~l~-------------~-----iiv~~~~~~~~i 65 (379)
.++.+|+|||| .||||+. ..||+|+|| .|+|++++.++.+. . ++.++....+.+
T Consensus 34 gkvavvlLAGG--~GTRLG~---~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t 108 (405)
T 3oc9_A 34 GKTALITPAGG--QGSRLGF---EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEI 108 (405)
T ss_dssp TCEEEEEECCS--BCTTTTC---CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHH
T ss_pred CceEEEEecCC--CcccccC---CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHH
Confidence 46899999999 9999976 899999999 99999999998773 1 556666666679
Q ss_pred HHHHHhhcccCCc---cEEEecC---------------------CCCCChHHHHHHHH-----HhhccCCCCeEEEEcCC
Q 016989 66 ALYVSSISNELRI---PVRYLRE---------------------DKPHGSAGALYNFR-----DLIMEDNPSHIFLLNCD 116 (379)
Q Consensus 66 ~~~l~~~~~~~~~---~i~~~~~---------------------~~~~g~~~al~~~~-----~~i~~~~~~~~lv~~gD 116 (379)
.+|+++. ..+|+ .+.+..| ..+.|+++.+.... +.+....-+++++.+.|
T Consensus 109 ~~~f~~~-~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvD 187 (405)
T 3oc9_A 109 NNYFKEH-QYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVD 187 (405)
T ss_dssp HHHHHHT-GGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTT
T ss_pred HHHHHhC-cccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCC
Confidence 9999874 44565 3554332 23678887766532 22333333589999999
Q ss_pred e-eecCChHHHHHHHHhcCCceEEEEEEeCCCCC-CceeEEEEeCCCCcEEEeeecCCC---------cccceeeeeEEE
Q 016989 117 V-CCSFPLPEMLDAHRNYGGMGTILVIKVSAESA-SQFGELVADPDTNELLHYTEKPET---------FVSDLINCGVYV 185 (379)
Q Consensus 117 ~-i~~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~d~~~~~v~~~~ekp~~---------~~~~~~~~Giy~ 185 (379)
+ +.......++..|.++++++++-+.+.. .+ ...|.+...+...+|+.+.+.|.. ..-+..|+++|+
T Consensus 188 N~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~--~~dek~Gvl~~~dg~~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~ 265 (405)
T 3oc9_A 188 NILCKDVDPNMIGYMDLLQSEICIKIVKKG--FKEEKVGVLVKEQERIKVVEYTELTDELNKQLSNGEFIYNCGHISING 265 (405)
T ss_dssp BTTCCSSCHHHHHHHHHTTCSEEEEEEECC--STTCSCCEEEEETTEEEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEE
T ss_pred CcccccCCHHHHHHHHHcCCCEEEEEEECC--CCCCccceEEEECCeeEEEEEeeCCHHHhhcCCCCceeeccceeEeee
Confidence 9 5578888999999999999988877753 33 678887764222367777776543 123467889999
Q ss_pred eCHhhHHHhh
Q 016989 186 FTPDIFNAIQ 195 (379)
Q Consensus 186 ~~~~~l~~l~ 195 (379)
|+.++++.+.
T Consensus 266 fs~~fL~~i~ 275 (405)
T 3oc9_A 266 YSTSFLEKAA 275 (405)
T ss_dssp EEHHHHHHHT
T ss_pred cCHHHHHHhh
Confidence 9999987664
No 57
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.35 E-value=1.9e-12 Score=115.27 Aligned_cols=130 Identities=20% Similarity=0.259 Sum_probs=67.7
Q ss_pred CCceEEEEEcccc----hhhcCCccchhhcchHHHHhhhhcCCccc-------c---CCCCCCCeEEecCeEECCCcEEC
Q 016989 240 GKKQLYTYETMDF----WEQIKTPGMSLKCSGLYLAQFRLTSPNLL-------A---SGDGTKNATIIGDVYVHPSAKIH 305 (379)
Q Consensus 240 ~~~~v~~~~~~~~----w~~i~t~~d~~~a~~~~l~~~~~~~~~~~-------~---~~~~~~~~~i~~~~~i~~~~~i~ 305 (379)
+..++++|...++ |.++++ ++++++.++..+........ . .....+++.|.+++.||+++.|+
T Consensus 37 ~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~ 113 (240)
T 3r8y_A 37 ETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIM 113 (240)
T ss_dssp TTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEEC
T ss_pred CcceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEEC
Confidence 4456677666655 999988 66666655543322111100 0 01123556666666666666665
Q ss_pred CCCC--------CCcEEe-ceEECCCCEECCCcEEeecccc-----cccccceEECCCcEECCCcEE-eccEECCCceec
Q 016989 306 PTAK--------ENAVVT-NAIVGWKSSIGRWSRVQAEGDF-----NAKLGITILGEAVGVEDEVVV-TNSIVLPNKTLN 370 (379)
Q Consensus 306 ~~~~--------~~~~i~-~s~ig~~~~ig~~~~i~~~~~~-----~~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~ 370 (379)
+++. ++|.|+ +|+|+++|.||++|+|+.+.+. ......++|+++|.||.+|.| .+++||++++|+
T Consensus 114 ~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~ 193 (240)
T 3r8y_A 114 MNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVA 193 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEEC
Confidence 5444 445554 5555555555555555544211 111122566666666666666 455555555555
Q ss_pred cc
Q 016989 371 VS 372 (379)
Q Consensus 371 ~~ 372 (379)
++
T Consensus 194 ~g 195 (240)
T 3r8y_A 194 AG 195 (240)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 58
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.32 E-value=2.2e-11 Score=118.20 Aligned_cols=182 Identities=17% Similarity=0.272 Sum_probs=127.0
Q ss_pred CceEEEEEecCCCCCCccCCCCCCCCCCCceeC---CcchhHHHHHhcCc-------------------EEEEcccchHH
Q 016989 7 DKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG---GQPMVHHPISACKR-------------------IYLVGFYEERE 64 (379)
Q Consensus 7 ~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~---g~pli~~~i~~l~~-------------------iiv~~~~~~~~ 64 (379)
.++.+|||||| .||||+. ..||+|+||+ |+|+|++.++.+.. ++++..+..+.
T Consensus 102 gkvavvlLaGG--~GTRLg~---~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~ 176 (486)
T 2yqc_A 102 GEVAVLLMAGG--QGTRLGS---SAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNA 176 (486)
T ss_dssp TCEEEEEEEES--BCGGGTC---SSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHH
T ss_pred CCeEEEEEcCC--ccccCCC---CCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHH
Confidence 36899999999 9999964 8899999999 99999999987641 55566666667
Q ss_pred HHHHHHhhcccCCcc---EEEecCC----------------------CCCChHHHHHHHH-----HhhccCCCCeEEEEc
Q 016989 65 FALYVSSISNELRIP---VRYLRED----------------------KPHGSAGALYNFR-----DLIMEDNPSHIFLLN 114 (379)
Q Consensus 65 i~~~l~~~~~~~~~~---i~~~~~~----------------------~~~g~~~al~~~~-----~~i~~~~~~~~lv~~ 114 (379)
+++|+++. ..+|++ |.+..|. .+.|+++.+.... +.+....-+++.+.+
T Consensus 177 t~~~~~~~-~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~ 255 (486)
T 2yqc_A 177 TESFFIEN-NYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYC 255 (486)
T ss_dssp HHHHHHHT-GGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEE
T ss_pred HHHHHhhc-cccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEEC
Confidence 99999873 445652 3322211 3678888776542 233222335788888
Q ss_pred CCeeec--CChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCCCC--cEEEeeecCCC------------cccce
Q 016989 115 CDVCCS--FPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDTN--ELLHYTEKPET------------FVSDL 178 (379)
Q Consensus 115 gD~i~~--~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--~v~~~~ekp~~------------~~~~~ 178 (379)
.|+++- .| ..++..|..+++++++.+.+.. ......|.+.....+| +|+.|.|+|.. ...+.
T Consensus 256 vDN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~-~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~ 333 (486)
T 2yqc_A 256 VDNCLVKVAD-PIFIGFAIAKKFDLATKVVRKR-DANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRA 333 (486)
T ss_dssp TTBTTCCTTC-HHHHHHHHHHTCSEEEEEEECC-STTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCE
T ss_pred CCCceeeccC-HHHHHHHHHcCCCEEEEEEEcC-CCCCceeEEEEEecCCCEEEEEEecCCHHHhhcccccccccccccc
Confidence 998883 34 4578888888999888777652 2336778777541134 47777787631 12467
Q ss_pred eeeeEEEeCHhhHHH-hhc
Q 016989 179 INCGVYVFTPDIFNA-IQG 196 (379)
Q Consensus 179 ~~~Giy~~~~~~l~~-l~~ 196 (379)
.|+++|+|+.++++. +.+
T Consensus 334 ~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 334 ANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EEEEEEEEEHHHHHHHHHH
T ss_pred eeEEEEEEeHHHHHHHHHh
Confidence 899999999998876 543
No 59
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=9.9e-13 Score=127.55 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=62.5
Q ss_pred CCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEc----CCeeecCChHHHHHHHHhc--C---------CceEEE
Q 016989 76 LRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLN----CDVCCSFPLPEMLDAHRNY--G---------GMGTIL 140 (379)
Q Consensus 76 ~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~----gD~i~~~dl~~~l~~~~~~--~---------~~~ti~ 140 (379)
.|..+.+...+.+++++.+++.+-+.+. .++|+. +|.+.+.++.+++..|.+. + ...++.
T Consensus 111 ~g~~vt~~~~~~pL~~a~~i~~~d~~~~-----~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~ 185 (496)
T 3c8v_A 111 KGQHFVCDGKMIPLHDDEVITIKDSFLN-----KTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVD 185 (496)
T ss_dssp TTCEEEETTEEEECSSCCEEEEESCEEE-----SCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEE
T ss_pred cCCEEEEEecccchhHhhhHHhhhhcCC-----ceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceee
Confidence 4566777666677888877544333221 137777 5887777777777766652 2 123333
Q ss_pred EEEeCCCCC--CceeEEEEeCCCCcEEEeeecCCCc--ccceeeeeEEEeCHhhHHHh
Q 016989 141 VIKVSAESA--SQFGELVADPDTNELLHYTEKPETF--VSDLINCGVYVFTPDIFNAI 194 (379)
Q Consensus 141 ~~~~~~~~~--~~~g~v~~d~~~~~v~~~~ekp~~~--~~~~~~~Giy~~~~~~l~~l 194 (379)
+.... ++ ..++.+. .+++....++|... ..+.....+|.|.++.++.+
T Consensus 186 L~~l~--d~li~~~~~~~----~g~i~~~~~~pg~~~i~~~~~lnf~Y~f~~~~L~~~ 237 (496)
T 3c8v_A 186 LSTIH--NSVVRYFSYVQ----TGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKY 237 (496)
T ss_dssp SCEEE--SCEECTTCEEE----SSEEESCEECTTEEEEECTTSEEEEEECCHHHHTTT
T ss_pred HHHHH--HHHHHHHhhhc----CCceEEeeecCCceecccccccceEEEcCHHHHHHH
Confidence 33332 23 4555442 46777777776521 22334556999998777644
No 60
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.02 E-value=1e-09 Score=97.53 Aligned_cols=89 Identities=21% Similarity=0.210 Sum_probs=60.2
Q ss_pred CCeEEecCeEECCCcEECCCCC--CCcEEe-ceEECCCCEECCCcEEeec----ccccccc-cceEECCCcEECCCcEEe
Q 016989 288 KNATIIGDVYVHPSAKIHPTAK--ENAVVT-NAIVGWKSSIGRWSRVQAE----GDFNAKL-GITILGEAVGVEDEVVVT 359 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~--~~~~i~-~s~ig~~~~ig~~~~i~~~----~~~~~~~-~~sii~~~~~i~~~~~i~ 359 (379)
.++.|++++.|+.++.|+++|. .++.|. +++||++|.||+++.|.+. ....+.+ ++|.||.+|.|.+++.|.
T Consensus 108 ~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig 187 (240)
T 3r8y_A 108 DNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVG 187 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEEC
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEEC
Confidence 4445545555555555555555 466786 8999999999988777430 0000111 129999999999999994
Q ss_pred -ccEECCCceeccccccc
Q 016989 360 -NSIVLPNKTLNVSVHQE 376 (379)
Q Consensus 360 -~~ii~~~~~i~~~~~~~ 376 (379)
+|+|++++.|..++++.
T Consensus 188 ~~~~I~~gsvV~~~vp~~ 205 (240)
T 3r8y_A 188 KGAVVAAGAVVTEDVPPY 205 (240)
T ss_dssp TTCEECTTCEECSCBCTT
T ss_pred CCCEECCCCEECCCcCCC
Confidence 89999999998887743
No 61
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.99 E-value=4.2e-09 Score=90.28 Aligned_cols=82 Identities=20% Similarity=0.219 Sum_probs=36.8
Q ss_pred CCCeEEecCeEEC--CCcEECCCCC--------CCcEEe-ceEECCCCEECCCcEEeecccccccccc-eEECCCcEECC
Q 016989 287 TKNATIIGDVYVH--PSAKIHPTAK--------ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGI-TILGEAVGVED 354 (379)
Q Consensus 287 ~~~~~i~~~~~i~--~~~~i~~~~~--------~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~-sii~~~~~i~~ 354 (379)
++++.+.+++.|| +++.|+++|+ +++.|. +++|+++|.||++|+|..+ +.+.. ++||++|.||.
T Consensus 79 ~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~----~~i~~~~~Ig~~~~Ig~ 154 (194)
T 3bfp_A 79 HKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVG----AKCAGNVKIGKNCFLGI 154 (194)
T ss_dssp CTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT----CEECTTCEECTTCEECT
T ss_pred CCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCC----CEECCCcEECCCCEEcC
Confidence 3444444444444 4444444333 334443 4444444444444444433 11211 56666666666
Q ss_pred CcEEe-ccEECCCceeccc
Q 016989 355 EVVVT-NSIVLPNKTLNVS 372 (379)
Q Consensus 355 ~~~i~-~~ii~~~~~i~~~ 372 (379)
++.|. ++.|++++.|+.+
T Consensus 155 ~~~i~~~~~Ig~~~~Igag 173 (194)
T 3bfp_A 155 NSCVLPNLSLADDSILGGG 173 (194)
T ss_dssp TCEECTTCEECTTCEECTT
T ss_pred CCEECCCCEECCCCEECCC
Confidence 65552 4444444444443
No 62
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.94 E-value=3.7e-09 Score=92.06 Aligned_cols=48 Identities=17% Similarity=0.141 Sum_probs=27.0
Q ss_pred eEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceecccc
Q 016989 317 AIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLNVSV 373 (379)
Q Consensus 317 s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~ 373 (379)
++||++|.|++++.|.++ ++||++|.||.+|.|.+++||+++.|+.++
T Consensus 112 ~~IG~~v~Ig~~~~I~~~---------v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags 159 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGP---------AYIGDGCFIGFRSTVFNARVGAGCVVMMHV 159 (213)
T ss_dssp EEECTTCEECTTCEEEEE---------EEECTTCEECTTCEEEEEEECTTCEECSSC
T ss_pred eEECCCcEECCCcEEcCC---------CEECCCCEECCCCEEeCcEECCCCEEcCCC
Confidence 444444444444444443 666666666666666556666666665544
No 63
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.92 E-value=5.2e-09 Score=88.01 Aligned_cols=42 Identities=24% Similarity=0.374 Sum_probs=26.2
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEec----eEECCCCEECCCcEEe
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVTN----AIVGWKSSIGRWSRVQ 332 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~~----s~ig~~~~ig~~~~i~ 332 (379)
.+++.+.+++.||+++.|+++|. |.. ++||++|.|+++|.|.
T Consensus 22 ~~~~~i~~~v~IG~~~~I~~~~~----i~~~~~~v~IG~~~~I~~~~~I~ 67 (173)
T 1xhd_A 22 ADYVTITGDVYVGEESSIWFNTV----IRGDVSPTIIGDRVNVQDQCTLH 67 (173)
T ss_dssp CTTCEEEEEEEECTTCEECTTCE----EEEEEEEEEECTTCEECTTCEEE
T ss_pred CCCCEEECCEEECCCcEEcCCcE----EecCCCeEEECCCCEECCCCEEE
Confidence 45566666666777777765543 432 5666666666666665
No 64
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.91 E-value=5e-09 Score=89.24 Aligned_cols=41 Identities=22% Similarity=0.376 Sum_probs=22.6
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe-c---eEECCCCEECCCcEE
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT-N---AIVGWKSSIGRWSRV 331 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~---s~ig~~~~ig~~~~i 331 (379)
.+++.+.+++.||+++.|+++|. |. + +.||++|.|+++|.|
T Consensus 25 ~~~~~i~~~v~IG~~~~I~~~~~----i~~~~~~i~IG~~~~I~~~~~I 69 (187)
T 3r3r_A 25 DTSSVVIGDVRLADDVGIWPLVV----IRGDVNYVAIGARTNIQDGSVL 69 (187)
T ss_dssp CTTCEEEEEEEECTTCEECTTCE----EEEEEEEEEECTTCEECTTCEE
T ss_pred CCCCEEECceEECCCCEECCCcE----EEcCCccEEECCCCEECCCCEE
Confidence 35555556666666666665543 32 2 355555555555555
No 65
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.90 E-value=4.6e-09 Score=89.81 Aligned_cols=42 Identities=31% Similarity=0.313 Sum_probs=23.5
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe----ceEECCCCEECCCcEEe
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT----NAIVGWKSSIGRWSRVQ 332 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~----~s~ig~~~~ig~~~~i~ 332 (379)
.+++.|.+++.||+++.|+++|. |. +.+||++|.|+++|.|.
T Consensus 43 ~~~~~i~~~v~IG~~~~I~~~~~----I~~~~~~i~IG~~~~I~~~~~I~ 88 (191)
T 3ixc_A 43 AGNARIIGDVCIGKNASIWYGTV----LRGDVDKIEVGEGTNIQDNTVVH 88 (191)
T ss_dssp CTTCEEEEEEEECTTCEECTTCE----EEEEEEEEEECTTCEECTTCEEC
T ss_pred CCCCEEeCCcEECCCCEECCCCE----EecCCCCeEECCCCEECCCCEEe
Confidence 35556666666666666665543 32 23555555555555554
No 66
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.90 E-value=3.9e-09 Score=91.33 Aligned_cols=57 Identities=21% Similarity=0.161 Sum_probs=31.4
Q ss_pred ceEECCCCEECCCcEEeeccc-c---------------cccccceEECCCcEECCCcEEe-ccEECCCceeccc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGD-F---------------NAKLGITILGEAVGVEDEVVVT-NSIVLPNKTLNVS 372 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~-~---------------~~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~i~~~ 372 (379)
+++||++|.||++|.|.+..- + ......++||++|.||.+|.|. ++.|+++++|+.+
T Consensus 91 ~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~g 164 (205)
T 3vbi_A 91 GIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAM 164 (205)
T ss_dssp EEEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred cEEECCCCEECCCcEEEeCCCCcccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCC
Confidence 377788888888877732100 0 0001226677777666666663 5555555555544
No 67
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.90 E-value=4.9e-09 Score=97.92 Aligned_cols=15 Identities=20% Similarity=0.450 Sum_probs=7.4
Q ss_pred eEECCCcEECCCcEE
Q 016989 344 TILGEAVGVEDEVVV 358 (379)
Q Consensus 344 sii~~~~~i~~~~~i 358 (379)
++||++|.||.+|.|
T Consensus 201 v~IGd~v~Ig~~~~I 215 (341)
T 3eh0_A 201 VIIGDRVEIGACTTI 215 (341)
T ss_dssp EEECSSCEECTTCEE
T ss_pred EEECCCcEECCccEe
Confidence 444444555555544
No 68
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.89 E-value=6.7e-09 Score=90.89 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=34.0
Q ss_pred eEEecCeEECCCcEECCCCC--CCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECC
Q 016989 290 ATIIGDVYVHPSAKIHPTAK--ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLP 365 (379)
Q Consensus 290 ~~i~~~~~i~~~~~i~~~~~--~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~ 365 (379)
+.|.+++.|+++++|+++|. .++.|. +++||++|.|++++.|.++ ++||++|.||.+|.|. ++.||+
T Consensus 118 ~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~---------v~Ig~~~~Ig~~~~i~~~~~Ig~ 188 (220)
T 4ea9_A 118 VAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGG---------VSVGERAFLGVGARVIPGVTIGA 188 (220)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS---------CEECTTCEECTTCEECTTCEECT
T ss_pred CEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCC---------CEECCCCEECCCCEEcCCcEECC
Confidence 33333344444444443333 333343 3444444444444444443 5666666666666552 444444
Q ss_pred Cceeccc
Q 016989 366 NKTLNVS 372 (379)
Q Consensus 366 ~~~i~~~ 372 (379)
++.|+.+
T Consensus 189 ~~~igag 195 (220)
T 4ea9_A 189 DTIVGAG 195 (220)
T ss_dssp TCEECTT
T ss_pred CCEECCC
Confidence 4444443
No 69
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.89 E-value=7e-09 Score=87.19 Aligned_cols=82 Identities=20% Similarity=0.229 Sum_probs=40.4
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe----ceEECCCCEECCCcEEeecc-----c-------ccccccceEECCCc
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT----NAIVGWKSSIGRWSRVQAEG-----D-------FNAKLGITILGEAV 350 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~----~s~ig~~~~ig~~~~i~~~~-----~-------~~~~~~~sii~~~~ 350 (379)
.+++.+.+++.||+++.|+++|. |. +++||++|.|+++|.|.... + .++.+..++||++|
T Consensus 20 ~~~a~i~g~v~IG~~~~I~~~~~----i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~ 95 (173)
T 1v3w_A 20 DENAVVIGDVVLEEKTSVWPSAV----LRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYV 95 (173)
T ss_dssp CTTSEEEEEEEECTTCEECTTCE----EEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSE
T ss_pred CCCCEEeCCEEECCCCEECCCeE----EecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCC
Confidence 45566666666666666665543 32 25555555555555554210 0 01112225555555
Q ss_pred EECCCcEEe-ccEECCCceeccc
Q 016989 351 GVEDEVVVT-NSIVLPNKTLNVS 372 (379)
Q Consensus 351 ~i~~~~~i~-~~ii~~~~~i~~~ 372 (379)
.||.+|.|. +++||+++.|+.+
T Consensus 96 ~Ig~~~~i~~~~~Ig~~~~Ig~~ 118 (173)
T 1v3w_A 96 IIGISSVILDGAKIGDHVIIGAG 118 (173)
T ss_dssp EECTTCEECTTCEECSSEEECTT
T ss_pred EECCCCEEeCCCEECCCCEECCC
Confidence 555555542 4444444444444
No 70
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.88 E-value=7.7e-09 Score=90.48 Aligned_cols=29 Identities=21% Similarity=0.219 Sum_probs=11.1
Q ss_pred eEECCCcEECCCcEEe-ccEECCCceeccc
Q 016989 344 TILGEAVGVEDEVVVT-NSIVLPNKTLNVS 372 (379)
Q Consensus 344 sii~~~~~i~~~~~i~-~~ii~~~~~i~~~ 372 (379)
+.||.+++|.++++|. +|+|+++++|..+
T Consensus 172 ~~Ig~~~~i~~~~~Ig~~~~igagsvv~~~ 201 (220)
T 4ea9_A 172 AFLGVGARVIPGVTIGADTIVGAGGVVVRD 201 (220)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CEECCCCEEcCCcEECCCCEECCCCEEccc
Confidence 3333333333333332 3333444433333
No 71
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.86 E-value=1.7e-08 Score=95.12 Aligned_cols=60 Identities=13% Similarity=0.262 Sum_probs=30.6
Q ss_pred CCcEEe-ceEECCCCEECCCcEEeecccccccc-cceEECCCcEECCCcEEe--------------------ccEECCCc
Q 016989 310 ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKL-GITILGEAVGVEDEVVVT--------------------NSIVLPNK 367 (379)
Q Consensus 310 ~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~-~~sii~~~~~i~~~~~i~--------------------~~ii~~~~ 367 (379)
+++.|. +++|+++|.||++|.|..+ +.+ .++.||++|.|+.++.|. +++||+++
T Consensus 154 ~~~~I~~~~~Ig~~v~IG~~~~I~~~----~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v 229 (372)
T 3pmo_A 154 AGVSIGAHCVIGARSVIGEGGWLAPR----VTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDV 229 (372)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTT----CEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSSC
T ss_pred CCCEECCCCEECCCCEECCCcccCCC----cEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCCC
Confidence 333443 4444444444444444432 111 125566666666666553 46666666
Q ss_pred eecccc
Q 016989 368 TLNVSV 373 (379)
Q Consensus 368 ~i~~~~ 373 (379)
.||+++
T Consensus 230 ~IGa~~ 235 (372)
T 3pmo_A 230 EIGANT 235 (372)
T ss_dssp EECTTC
T ss_pred EECCCc
Confidence 666655
No 72
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.86 E-value=9.8e-09 Score=88.00 Aligned_cols=82 Identities=20% Similarity=0.209 Sum_probs=43.7
Q ss_pred CeEEecCeEECCCcEECCCCC--CCcEEe-ceEECCCCEECCCcEEeecccccccc-cceEECCCcEECCCcEEe-ccEE
Q 016989 289 NATIIGDVYVHPSAKIHPTAK--ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKL-GITILGEAVGVEDEVVVT-NSIV 363 (379)
Q Consensus 289 ~~~i~~~~~i~~~~~i~~~~~--~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~-~~sii~~~~~i~~~~~i~-~~ii 363 (379)
++.|.+++.|+++++|+++|. .++.|. ++.||++|.|++++.|.++ +.+ +++.|+.++.|.++++|. +|+|
T Consensus 95 g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~----~~Ig~~~~Ig~~~~i~~~~~Ig~~~~I 170 (194)
T 3bfp_A 95 GILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGN----VKIGKNCFLGINSCVLPNLSLADDSIL 170 (194)
T ss_dssp CCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT----CEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCC----cEECCCCEEcCCCEECCCCEECCCCEE
Confidence 344444444444444444444 344444 4555555555444444332 111 127777777777777774 7777
Q ss_pred CCCceeccccc
Q 016989 364 LPNKTLNVSVH 374 (379)
Q Consensus 364 ~~~~~i~~~~~ 374 (379)
+++++|.++++
T Consensus 171 gagsvv~~~v~ 181 (194)
T 3bfp_A 171 GGGATLVKNQD 181 (194)
T ss_dssp CTTCEECSCBC
T ss_pred CCCCEEccccC
Confidence 77777777665
No 73
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.86 E-value=9.7e-09 Score=87.83 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=22.6
Q ss_pred cceEECCCcEECCCcEEe-ccEECCCceecccc
Q 016989 342 GITILGEAVGVEDEVVVT-NSIVLPNKTLNVSV 373 (379)
Q Consensus 342 ~~sii~~~~~i~~~~~i~-~~ii~~~~~i~~~~ 373 (379)
.+++|+++|.||.+|.|. ++.|+++++|+.++
T Consensus 101 ~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~Igags 133 (192)
T 3mqg_A 101 RDTIVRQGATLGANCTVVCGATIGRYAFVGAGA 133 (192)
T ss_dssp CCEEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCcEECCCcEECCCCEECCCCEECCCCEEcCCC
Confidence 457888888888888884 66666666666553
No 74
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.85 E-value=1e-08 Score=93.79 Aligned_cols=64 Identities=22% Similarity=0.256 Sum_probs=33.6
Q ss_pred CCcEEe-ceEECCCCEECCCcEEeeccccc-----ccccceEECCCcEECCCcEE-eccEECCCceecccc
Q 016989 310 ENAVVT-NAIVGWKSSIGRWSRVQAEGDFN-----AKLGITILGEAVGVEDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 310 ~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~-----~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
++|.|. +++||++|.||++|.|..+.... .....++||++|.||.+|.| .+++||++++|+.++
T Consensus 163 ~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgags 233 (304)
T 3eg4_A 163 KGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGV 233 (304)
T ss_dssp TTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCC
Confidence 444554 45555555556555555542110 01112667777777766655 355555555555554
No 75
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.85 E-value=1.1e-08 Score=87.57 Aligned_cols=22 Identities=9% Similarity=0.042 Sum_probs=11.9
Q ss_pred CCCeEEecCeEECCCcEECCCC
Q 016989 287 TKNATIIGDVYVHPSAKIHPTA 308 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~ 308 (379)
++++.|.+++.|++++.|++++
T Consensus 7 ~p~a~I~~~~~Ig~~~~I~~~~ 28 (192)
T 3mqg_A 7 HPTAIVDEGARIGAHSRIWHWV 28 (192)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred CCCcEECCCCEECCCCEECCCC
Confidence 3555555555555555555444
No 76
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.85 E-value=1.1e-08 Score=87.20 Aligned_cols=43 Identities=23% Similarity=0.376 Sum_probs=26.1
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe----ceEECCCCEECCCcEEee
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT----NAIVGWKSSIGRWSRVQA 333 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~----~s~ig~~~~ig~~~~i~~ 333 (379)
.+++.+.+++.||+++.|+++|. |. ++.||++|.|+++|.|..
T Consensus 29 ~~~~~i~~~v~IG~~~~I~~~~~----i~~~~~~i~IG~~~~I~~~~~I~~ 75 (189)
T 3r1w_A 29 DRSSVIIGDVELGDDCSVWPLAV----IRGDMHHIRIGARTSVQDGSVLHI 75 (189)
T ss_dssp CTTCEEEEEEEECTTCEECTTCE----EEEEEEEEEECTTCEECTTCEEEC
T ss_pred CCCCEEeeeeEECCCCEECCCCE----EecCCCceEECCCCEECCCCEEec
Confidence 35566666666666666665543 32 336666666666666654
No 77
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.84 E-value=8.4e-09 Score=93.99 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=51.2
Q ss_pred CCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccc--------cccccceEECCCcEECCCcEE
Q 016989 288 KNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDF--------NAKLGITILGEAVGVEDEVVV 358 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~--------~~~~~~sii~~~~~i~~~~~i 358 (379)
.+..|++++.||+++.|+++ .++.|+ +++||++|.|+.+|.|+++... ......++||++|.||.||.|
T Consensus 189 ~gv~I~p~a~IG~~v~I~hg--~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~I 266 (310)
T 3f1x_A 189 TGIDIHPGAQIGHHFTIDHG--TGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATI 266 (310)
T ss_dssp HSCEECTTCEECSSCEEESC--TTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEE
T ss_pred CCcEECCCCEECCCcEECCC--CCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEE
Confidence 34566677777777777433 234565 6777777777777777765210 011122478888888888877
Q ss_pred e-ccEECCCceecccc
Q 016989 359 T-NSIVLPNKTLNVSV 373 (379)
Q Consensus 359 ~-~~ii~~~~~i~~~~ 373 (379)
. +++||++++||.++
T Consensus 267 l~gv~IGd~a~IGags 282 (310)
T 3f1x_A 267 LGRVTIGKGATVGGNI 282 (310)
T ss_dssp ESSCEECTTCEECSSC
T ss_pred CCCcEECCCCEECCCC
Confidence 4 66666666666654
No 78
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.83 E-value=1.3e-08 Score=91.90 Aligned_cols=86 Identities=21% Similarity=0.232 Sum_probs=43.6
Q ss_pred CCeEEecCeEECCCcEECC-----CCC--CCcEEe-ceEECCCCEECCCcEEeecccccc-----cccceEECCCcEECC
Q 016989 288 KNATIIGDVYVHPSAKIHP-----TAK--ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNA-----KLGITILGEAVGVED 354 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~-----~~~--~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~-----~~~~sii~~~~~i~~ 354 (379)
+++.|.+++.|++++.|++ ++. ++|.|. +++|+++|.||++|+|+.+....+ ...+++||++|.||.
T Consensus 109 p~a~I~~~~~Ig~g~~I~~~~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~ 188 (276)
T 3gos_A 109 PPATVRKGAFIARNTVLMPSYVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGA 188 (276)
T ss_dssp TTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECT
T ss_pred CCcEECCCCEECCCCEEcCCEEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECC
Confidence 4444444444444444444 222 444555 555555555555555555422111 011366777777777
Q ss_pred CcEEe-ccEECCCceecccc
Q 016989 355 EVVVT-NSIVLPNKTLNVSV 373 (379)
Q Consensus 355 ~~~i~-~~ii~~~~~i~~~~ 373 (379)
+|.|. ++.||+++.|+.++
T Consensus 189 ~a~I~~gv~IG~~avIgags 208 (276)
T 3gos_A 189 RSEVVEGVIVEEGSVISMGV 208 (276)
T ss_dssp TCEECTTCEECTTCEECTTC
T ss_pred CCEECCCCEECCCCEECCCC
Confidence 77663 55555555555543
No 79
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.83 E-value=6e-09 Score=93.67 Aligned_cols=86 Identities=8% Similarity=0.066 Sum_probs=55.2
Q ss_pred CCCeEEecCeEECCCcEECCCCC--------CCcEEe-----ceEECCCCEECCCcEEeecccccccccceEECCCcEEC
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAK--------ENAVVT-----NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVE 353 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~--------~~~~i~-----~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~ 353 (379)
.++++|.+++.||+++.|+++++ .+|+|+ .++||++|.|+++|.|... .....-.+++||++|.||
T Consensus 165 ~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~-~~~~~~~~V~IGDnv~IG 243 (332)
T 3fsy_A 165 ADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGT-LSGGGTHVISIGKRCLLG 243 (332)
T ss_dssp SCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSB-CC---CCBCEECTTCEEC
T ss_pred CCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCC-CCCCCccceEECCCCEEC
Confidence 35555555666666666666554 444443 2667777777777777542 111223348999999999
Q ss_pred CCcEEeccEECCCceeccccc
Q 016989 354 DEVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 354 ~~~~i~~~ii~~~~~i~~~~~ 374 (379)
.||.| ++.||++|+||.++.
T Consensus 244 anAtI-gVtIGd~~iIGAGSV 263 (332)
T 3fsy_A 244 ANSGL-GISLGDDCVVEAGLY 263 (332)
T ss_dssp TTCEE-CSCBCSSCEECTTCE
T ss_pred CCCEE-eeEECCCCEECCCCE
Confidence 99998 777777777777654
No 80
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.82 E-value=1.5e-08 Score=91.10 Aligned_cols=65 Identities=14% Similarity=0.295 Sum_probs=41.8
Q ss_pred CCcEEe-ceEECCCCEECCCcEEeeccc---ccccccceEECCCcEECCCcEEec--------cEECCCceeccccc
Q 016989 310 ENAVVT-NAIVGWKSSIGRWSRVQAEGD---FNAKLGITILGEAVGVEDEVVVTN--------SIVLPNKTLNVSVH 374 (379)
Q Consensus 310 ~~~~i~-~s~ig~~~~ig~~~~i~~~~~---~~~~~~~sii~~~~~i~~~~~i~~--------~ii~~~~~i~~~~~ 374 (379)
+++.|. ++.||++|.|+++|.|....- +.++..+++||++|.|+++|.|.. ++||+++.|+.++.
T Consensus 46 ~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~ 122 (262)
T 2qia_A 46 SHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAH 122 (262)
T ss_dssp SSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCE
T ss_pred CCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeE
Confidence 444555 666666666666666653100 112233588999999999998853 77888777777653
No 81
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.79 E-value=2.5e-08 Score=88.83 Aligned_cols=41 Identities=22% Similarity=0.379 Sum_probs=20.2
Q ss_pred CCeEEecCeEECCCcEECCCCCCCcEEe-----ceEECCCCEECCCcEEe
Q 016989 288 KNATIIGDVYVHPSAKIHPTAKENAVVT-----NAIVGWKSSIGRWSRVQ 332 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~~~~~i~-----~s~ig~~~~ig~~~~i~ 332 (379)
+++.|.+++.||+++.|+++|+ |. +.+||++|.|+++|.|.
T Consensus 70 ~~a~I~g~v~IG~~~~I~~~~~----I~~~~~~~i~IG~~~~Ig~~~~I~ 115 (247)
T 1qre_A 70 PQASVIGEVTIGANVMVSPMAS----IRSDEGMPIFVGDRSNVQDGVVLH 115 (247)
T ss_dssp TTCEEEESEEECTTCEECTTCE----EEESSSCCEEECTTCEECTTCEEE
T ss_pred CCCEEeCCcEECCCCEECCCcE----EecCCCCCEEECCCCEECCCeEEE
Confidence 4445545555555555555442 22 12455555555555554
No 82
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.79 E-value=1.7e-08 Score=90.79 Aligned_cols=83 Identities=13% Similarity=0.009 Sum_probs=50.0
Q ss_pred CCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECC
Q 016989 288 KNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLP 365 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~ 365 (379)
.+..|++++.||+++.|++++ +++|+ +++||++|.|+.++.|++.... .....++||++|.||.||.|. +++||+
T Consensus 163 ~gi~I~p~a~IG~~v~I~hg~--gvvIG~~~~IGd~v~I~~gvtIg~~~~~-~~~r~~~IGd~v~IGaga~Il~gv~IG~ 239 (287)
T 3mc4_A 163 FQTDIHPAARLGSGLFLDHAT--GLVVGETAVVEDNVSILHGVTLGGTGKS-SGDRHPKIRQGVLIGAGAKILGNIQVGQ 239 (287)
T ss_dssp TCCEECTTCEECSSCEEESCT--TCEECTTCEECSSCEEETTCEEEC------CCCSCEECTTCEECTTCEEESSCEECT
T ss_pred cCeEECCCCEECCCeEEccCC--CeEECCCeEECCCCEEcCCCEEcCCccc-CCCcCCEECCCCEECCCCEECCCcEECC
Confidence 345666777777777776542 34565 6777777777777777663211 111236777777777777663 566666
Q ss_pred Cceecccc
Q 016989 366 NKTLNVSV 373 (379)
Q Consensus 366 ~~~i~~~~ 373 (379)
+++||.++
T Consensus 240 ~a~IGags 247 (287)
T 3mc4_A 240 CSKIAAGS 247 (287)
T ss_dssp TCEECTTC
T ss_pred CCEECCCC
Confidence 66666554
No 83
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.78 E-value=1.4e-08 Score=91.54 Aligned_cols=65 Identities=11% Similarity=0.190 Sum_probs=41.1
Q ss_pred CCcEEe-ceEECCCCEECCCcEEeeccc---ccccc-cceEECCCcEECCCcEEec--------cEECCCceeccccc
Q 016989 310 ENAVVT-NAIVGWKSSIGRWSRVQAEGD---FNAKL-GITILGEAVGVEDEVVVTN--------SIVLPNKTLNVSVH 374 (379)
Q Consensus 310 ~~~~i~-~s~ig~~~~ig~~~~i~~~~~---~~~~~-~~sii~~~~~i~~~~~i~~--------~ii~~~~~i~~~~~ 374 (379)
+++.|. ++.||++|.|++++.|+..-- +.++. .+++||++|.|+++|.|.. ++||+++.|+.++.
T Consensus 45 ~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~ 122 (266)
T 3r0s_A 45 QGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCH 122 (266)
T ss_dssp TTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCE
T ss_pred CCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEEECCCceeCCcce
Confidence 444555 667777777777777741000 01111 3499999999999999963 67777777776653
No 84
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.78 E-value=9.4e-09 Score=96.53 Aligned_cols=15 Identities=20% Similarity=0.392 Sum_probs=6.1
Q ss_pred eEECCCcEECCCcEE
Q 016989 344 TILGEAVGVEDEVVV 358 (379)
Q Consensus 344 sii~~~~~i~~~~~i 358 (379)
++||++|.|+.++.|
T Consensus 169 ~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 169 SKLRDRVRIHSSTVI 183 (357)
T ss_dssp CEECSSCEECTTCEE
T ss_pred cEEEeEeeccCCeEE
Confidence 444444444444433
No 85
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.78 E-value=2.4e-08 Score=89.20 Aligned_cols=83 Identities=12% Similarity=0.019 Sum_probs=54.9
Q ss_pred CCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECC
Q 016989 288 KNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLP 365 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~ 365 (379)
.+..|++++.||+++.|++++ ++.|+ +++||++|.|++++.|++.... ....+++||++|.||.||.|. +++||+
T Consensus 136 ~g~~I~p~a~IG~g~~I~~~~--~vvIG~~~~IG~~v~I~~gvtig~~~~~-~~~~~~~IGd~v~IGaga~Il~gv~IG~ 212 (267)
T 1ssq_A 136 FDVDIHPAAKIGHGIMFDHAT--GIVVGETSVIENDVSILQGVTLGGTGKE-SGDRHPKVREGVMIGAGAKILGNIEVGK 212 (267)
T ss_dssp HSCEECTTCEECSSCEESSCT--TCEECTTCEECTTCEECTTCEEECCSSS-CSSCSCEECTTCEECTTCEEESSCEECT
T ss_pred cceEeCCCCEECCCEEECCCC--ceEECCeeEECCCCEEcCCcEECCCccc-CCCCCeEECCCeEEcCCCEEeCCcEECC
Confidence 345667777777777777652 45676 7888888888888888764211 112336788888888777773 556666
Q ss_pred Cceecccc
Q 016989 366 NKTLNVSV 373 (379)
Q Consensus 366 ~~~i~~~~ 373 (379)
+++||.++
T Consensus 213 ~a~IGags 220 (267)
T 1ssq_A 213 YAKIGANS 220 (267)
T ss_dssp TCEECTTC
T ss_pred CCEECCCC
Confidence 66665554
No 86
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.78 E-value=2.6e-08 Score=89.39 Aligned_cols=16 Identities=6% Similarity=0.038 Sum_probs=8.2
Q ss_pred ceEECCCCEECCCcEE
Q 016989 316 NAIVGWKSSIGRWSRV 331 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i 331 (379)
++.||++|.|+++|.|
T Consensus 48 ~~~IG~~~~I~~~a~I 63 (259)
T 3hsq_A 48 GSEIGKFNRFHQGAVI 63 (259)
T ss_dssp TEEECSSCEECTTCEE
T ss_pred CcEECCCcEECCCCEE
Confidence 3555555555555555
No 87
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.78 E-value=3.1e-08 Score=89.24 Aligned_cols=83 Identities=13% Similarity=0.036 Sum_probs=56.1
Q ss_pred CCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECC
Q 016989 288 KNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLP 365 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~ 365 (379)
.+..|++++.||+++.|+++ .++.|+ +++||++|.|+.++.|++..... ...+++||++|.||.||.|. +++||+
T Consensus 156 ~g~~I~p~a~IG~gv~I~~g--~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~-~~~~~~IGd~v~IGaga~Ilggv~IG~ 232 (289)
T 1t3d_A 156 FQVDIHPAAKIGRGIMLDHA--TGIVVGETAVIENDVSILQSVTLGGTGKSG-GDRHPKIREGVMIGAGAKILGNIEVGR 232 (289)
T ss_dssp HSCEECTTCEECSSCEECSC--TTCEECTTCEECSSCEECTTCEEECCSSSC-SSCSCEECTTCEECTTCEEESSCEECT
T ss_pred cceEEcCCCEEcCCEEECCC--CceEECCCcEECCCCEEcCCcEECCCcccc-CCCCeEECCCeEECCCCEEecCcEECC
Confidence 34567777777777777765 246777 78888888888888887642211 12336788888888887773 556666
Q ss_pred Cceecccc
Q 016989 366 NKTLNVSV 373 (379)
Q Consensus 366 ~~~i~~~~ 373 (379)
+++||.++
T Consensus 233 ~a~IGags 240 (289)
T 1t3d_A 233 GAKIGAGS 240 (289)
T ss_dssp TCEECTTC
T ss_pred CCEECCCC
Confidence 66666553
No 88
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.77 E-value=1.6e-08 Score=91.28 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=42.5
Q ss_pred CCcEEe-ceEECCCCEECCCcEEeeccc---ccccccceEECCCcEECCCcEEe--------ccEECCCceecccc
Q 016989 310 ENAVVT-NAIVGWKSSIGRWSRVQAEGD---FNAKLGITILGEAVGVEDEVVVT--------NSIVLPNKTLNVSV 373 (379)
Q Consensus 310 ~~~~i~-~s~ig~~~~ig~~~~i~~~~~---~~~~~~~sii~~~~~i~~~~~i~--------~~ii~~~~~i~~~~ 373 (379)
+++.|. ++.||++|.|+++|.|+...- +.++..+++||+++.|+++|.|. +++||+++.|+.++
T Consensus 42 ~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~ 117 (270)
T 1j2z_A 42 NNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYV 117 (270)
T ss_dssp TTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEECCCCTTTTSEEEECSSCEECTTC
T ss_pred CCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEcCCeecCCccEEECCCcEECccc
Confidence 445565 777777777777777752100 12333458889999999999885 36777777666554
No 89
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.77 E-value=1.7e-08 Score=85.83 Aligned_cols=72 Identities=19% Similarity=0.277 Sum_probs=49.3
Q ss_pred CCeEEecCe---EECCCcEECCCCCCCcEE------------eceEECCCCEECCCcEEeecccccccccceEECCCcEE
Q 016989 288 KNATIIGDV---YVHPSAKIHPTAKENAVV------------TNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGV 352 (379)
Q Consensus 288 ~~~~i~~~~---~i~~~~~i~~~~~~~~~i------------~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i 352 (379)
+++.|.+++ .||+++.|+++| .| .+++||++|.||++|.|.+ ++||++|.|
T Consensus 44 ~~~~i~~~~~~i~IG~~~~I~~~~----~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~----------~~Ig~~~~I 109 (187)
T 3r3r_A 44 PLVVIRGDVNYVAIGARTNIQDGS----VLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHG----------CTIGNRVLV 109 (187)
T ss_dssp TTCEEEEEEEEEEECTTCEECTTC----EEECBCCBTTBC-CBCEEECSSCEECTTCEEES----------CEECSSEEE
T ss_pred CCcEEEcCCccEEECCCCEECCCC----EEecCCccccCCCCCCeEECCCCEECCCCEEeC----------cEECCCCEE
Confidence 444444432 666666666544 45 5788888888888888876 778888888
Q ss_pred CCCcEE-eccEECCCceecccc
Q 016989 353 EDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 353 ~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
|.+|.| .++.|++++.|+.++
T Consensus 110 g~~~~I~~~~~Ig~~~~Ig~~s 131 (187)
T 3r3r_A 110 GMGSIVLDGAIIEDDVMIGAGS 131 (187)
T ss_dssp CTTCEECTTCEECSSEEECTTC
T ss_pred CCCCEECCCCEECCCCEECCCC
Confidence 877777 366777776666654
No 90
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.77 E-value=3.1e-08 Score=84.87 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=29.8
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe----ceEECCCCEECCCcEEeec
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT----NAIVGWKSSIGRWSRVQAE 334 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~----~s~ig~~~~ig~~~~i~~~ 334 (379)
.+++.|.+++.||+++.|+++|+ |. +.+||++|.|+++|.|...
T Consensus 22 ~~~a~I~g~V~IG~~~~I~~~~~----I~~~~g~i~IG~~~~I~~~~~I~~~ 69 (194)
T 3tv0_A 22 CVESEIRGDVTIGPRTVIHPKAR----IIAEAGPIVIGEGNLIEEQALIINA 69 (194)
T ss_dssp CTTSEEESSEEECTTCEECTTCE----EEESSSCEEECTTCEECTTCEEEEC
T ss_pred cCCCEEeCCCEECCCCEECCCCE----EccCCCCeEECCCccccCCcccccc
Confidence 45666666777777777776654 42 4678888888888887543
No 91
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.77 E-value=2.9e-08 Score=84.77 Aligned_cols=63 Identities=21% Similarity=0.254 Sum_probs=42.8
Q ss_pred EECCCcEECCCCCCCcEEe------ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECCCcee
Q 016989 297 YVHPSAKIHPTAKENAVVT------NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLPNKTL 369 (379)
Q Consensus 297 ~i~~~~~i~~~~~~~~~i~------~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~i 369 (379)
.||+++.|+++| .|. +++||++|.||+++.|.+ ++||++|.||.+|.|. ++.|++++.|
T Consensus 74 ~IG~~~~I~~~~----~I~~~~~~g~~~Ig~~~~Ig~~~~i~~----------~~Ig~~~~Ig~~~~I~~~~~Ig~~~~I 139 (191)
T 3ixc_A 74 EVGEGTNIQDNT----VVHTDSMHGDTVIGKFVTIGHSCILHA----------CTLGNNAFVGMGSIVMDRAVMEEGSML 139 (191)
T ss_dssp EECTTCEECTTC----EECC----CCEEECTTCEECTTCEECS----------CEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EECCCCEECCCC----EEeecCCcCCeEECCCCEECCCCEEEC----------CEECCCCEECCCCEEeCCeEECCCCEE
Confidence 455555555443 454 788888888888888876 7777777777777774 4666666666
Q ss_pred cccc
Q 016989 370 NVSV 373 (379)
Q Consensus 370 ~~~~ 373 (379)
+.++
T Consensus 140 g~gs 143 (191)
T 3ixc_A 140 AAGS 143 (191)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6543
No 92
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.77 E-value=2.1e-08 Score=92.02 Aligned_cols=86 Identities=19% Similarity=0.217 Sum_probs=43.0
Q ss_pred CCeEEecCeEECCCcEECCC-----CC--CCcEEe-ceEECCCCEECCCcEEeecccccc-----cccceEECCCcEECC
Q 016989 288 KNATIIGDVYVHPSAKIHPT-----AK--ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNA-----KLGITILGEAVGVED 354 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~-----~~--~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~-----~~~~sii~~~~~i~~ 354 (379)
+++.|.+++.||+++.|+++ +. +++.|. +++||++|.||++|+|+.+..... ...+++||++|.||.
T Consensus 150 p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~ 229 (316)
T 3tk8_A 150 PPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGA 229 (316)
T ss_dssp TTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECT
T ss_pred CCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECC
Confidence 44555555555555544442 22 455555 466666666666666665422100 111256666666665
Q ss_pred CcEE-eccEECCCceecccc
Q 016989 355 EVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 355 ~~~i-~~~ii~~~~~i~~~~ 373 (379)
+|.| .++.||++++|+.++
T Consensus 230 ~a~I~~gv~IG~g~vIgags 249 (316)
T 3tk8_A 230 RSEVVEGVIVEENSVISMGV 249 (316)
T ss_dssp TCEECTTCEECTTCEECTTC
T ss_pred CCEEcCCCEECCCCEEcCCC
Confidence 5555 244444444444443
No 93
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=98.76 E-value=6.3e-08 Score=90.39 Aligned_cols=85 Identities=20% Similarity=0.224 Sum_probs=44.2
Q ss_pred CCCCeEEecCeEECCCcEECCCCC--------CCcEEe-ceEECCCCEECCCcEEeecccccccc-cceEECCCcEECCC
Q 016989 286 GTKNATIIGDVYVHPSAKIHPTAK--------ENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKL-GITILGEAVGVEDE 355 (379)
Q Consensus 286 ~~~~~~i~~~~~i~~~~~i~~~~~--------~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~-~~sii~~~~~i~~~ 355 (379)
.++++.|.+++.|++++.|+++|+ ++|.|. +++||.+|.||++|.|..+ +.+ .++.||++|.|+.+
T Consensus 100 i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~----~~I~~~~~IG~~~~I~~g 175 (341)
T 3eh0_A 100 IAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWAN----VTIYHEIQIGQNCLIQSG 175 (341)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS----CEECTTCEECSSCEECTT
T ss_pred cCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCC----cEECCCCEECCccEEcCC
Confidence 345555555555555555554443 333332 3333333333333333332 222 23667777777777
Q ss_pred cEE--------------------eccEECCCceeccccc
Q 016989 356 VVV--------------------TNSIVLPNKTLNVSVH 374 (379)
Q Consensus 356 ~~i--------------------~~~ii~~~~~i~~~~~ 374 (379)
+.| .+++||+++.|+.++.
T Consensus 176 ~~I~~~~fg~~~~~~~~~~i~~~g~v~IGd~v~Ig~~~~ 214 (341)
T 3eh0_A 176 TVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTT 214 (341)
T ss_dssp CEEEECCSCEEEETTEEEECCCCCCEEECSSCEECTTCE
T ss_pred cEECCccccccccCCccccccccCcEEECCCcEECCccE
Confidence 766 2467777777777765
No 94
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=98.76 E-value=4.5e-08 Score=91.89 Aligned_cols=24 Identities=17% Similarity=0.004 Sum_probs=15.2
Q ss_pred CCCCeEEecCeEECCCcEECCCCC
Q 016989 286 GTKNATIIGDVYVHPSAKIHPTAK 309 (379)
Q Consensus 286 ~~~~~~i~~~~~i~~~~~i~~~~~ 309 (379)
.++++.|.+++.|++++.|+++|+
T Consensus 105 i~p~a~I~~~a~ig~~~~I~~~~~ 128 (357)
T 4e79_A 105 IESTARIHPSAVISETAYIGHYVV 128 (357)
T ss_dssp ECTTCEECTTCEECTTCEECTTCE
T ss_pred eCCCCEECCCCEECCCCEECCCCE
Confidence 456666666666666666665554
No 95
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.75 E-value=2e-08 Score=91.37 Aligned_cols=65 Identities=12% Similarity=0.296 Sum_probs=41.2
Q ss_pred CCcEEe-ceEECCCCEECCCcEEeeccc---ccccccceEECCCcEECCCcEEec--------cEECCCceeccccc
Q 016989 310 ENAVVT-NAIVGWKSSIGRWSRVQAEGD---FNAKLGITILGEAVGVEDEVVVTN--------SIVLPNKTLNVSVH 374 (379)
Q Consensus 310 ~~~~i~-~s~ig~~~~ig~~~~i~~~~~---~~~~~~~sii~~~~~i~~~~~i~~--------~ii~~~~~i~~~~~ 374 (379)
+++.|. ++.||++|.|+++|.|+...- +.++..+++||++|.|+++|.|.. ++||+++.|+.++.
T Consensus 63 ~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~ 139 (283)
T 4eqy_A 63 SHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVH 139 (283)
T ss_dssp TTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCE
T ss_pred CCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEccceecCCCceEECCCcEECceeE
Confidence 344454 566666666666666642100 122334589999999999999974 77777777776653
No 96
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.75 E-value=4.4e-08 Score=83.58 Aligned_cols=76 Identities=11% Similarity=0.009 Sum_probs=42.2
Q ss_pred ecCeEECCCcEECCCCCCCcEEe---ceEECCCCEECCCcEEeecccc--------ccc-ccceEECCCcEECCCcEEe-
Q 016989 293 IGDVYVHPSAKIHPTAKENAVVT---NAIVGWKSSIGRWSRVQAEGDF--------NAK-LGITILGEAVGVEDEVVVT- 359 (379)
Q Consensus 293 ~~~~~i~~~~~i~~~~~~~~~i~---~s~ig~~~~ig~~~~i~~~~~~--------~~~-~~~sii~~~~~i~~~~~i~- 359 (379)
+.++.||+++.|+++| .|. ...||++|.||++|.|...... ... -.+++||++|.||.+|.|.
T Consensus 76 g~~v~IG~~~~I~~~~----~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~ 151 (190)
T 3hjj_A 76 GYNIHVGKSFFANFNC----VILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINP 151 (190)
T ss_dssp STTEEECTTCEECTTC----EEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECT
T ss_pred CCceEECCceeeCCCe----EEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECC
Confidence 4456666666666554 443 5678888888888888543210 000 1125666666666666653
Q ss_pred ccEECCCceeccc
Q 016989 360 NSIVLPNKTLNVS 372 (379)
Q Consensus 360 ~~ii~~~~~i~~~ 372 (379)
++.||++++|+.+
T Consensus 152 gv~IG~~~vIgag 164 (190)
T 3hjj_A 152 GVSIGDNAVIASG 164 (190)
T ss_dssp TCEECTTCEECTT
T ss_pred CCEECCCCEECCC
Confidence 4444444444443
No 97
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.74 E-value=2.4e-08 Score=89.93 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=40.5
Q ss_pred CcEEe-ceEECCCCEECCCcEEeeccc---ccccccceEECCCcEECCCcEEe--------ccEECCCceeccccc
Q 016989 311 NAVVT-NAIVGWKSSIGRWSRVQAEGD---FNAKLGITILGEAVGVEDEVVVT--------NSIVLPNKTLNVSVH 374 (379)
Q Consensus 311 ~~~i~-~s~ig~~~~ig~~~~i~~~~~---~~~~~~~sii~~~~~i~~~~~i~--------~~ii~~~~~i~~~~~ 374 (379)
++.|. ++.||++|.|++++.|+...- +.++..+++||++|.|+++|.|. +++||+++.|+.++.
T Consensus 49 ~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~ 124 (265)
T 4e6u_A 49 HVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTH 124 (265)
T ss_dssp SCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCE
T ss_pred CcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeE
Confidence 34444 566666666666666632100 12233459999999999999996 477777777766653
No 98
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.74 E-value=2.2e-08 Score=97.15 Aligned_cols=83 Identities=16% Similarity=0.076 Sum_probs=48.0
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEeceEECCCCEECCCcEEeeccc-------ccccccceEECCCcEECCCcEEe
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVTNAIVGWKSSIGRWSRVQAEGD-------FNAKLGITILGEAVGVEDEVVVT 359 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~~s~ig~~~~ig~~~~i~~~~~-------~~~~~~~sii~~~~~i~~~~~i~ 359 (379)
.+++.+.+++.||+++.|+++| .|++++||++|.|+++|.|.+..+ .++.+..++||++|.||.+|.|.
T Consensus 283 ~p~a~i~g~v~IG~~~~I~~~a----~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~ 358 (496)
T 3c8v_A 283 SGYAVIKGDTVIGENVLVSQRA----YLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQ 358 (496)
T ss_dssp CTTSEEESSCEECTTCEECTTC----EEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEE
T ss_pred CCCcEEeCCeEECCCCEECCCc----EEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEe
Confidence 3555555666666766666554 456666666666666666654111 12222336666666666666665
Q ss_pred cc-----EECCCceecccc
Q 016989 360 NS-----IVLPNKTLNVSV 373 (379)
Q Consensus 360 ~~-----ii~~~~~i~~~~ 373 (379)
++ +||+++.||.++
T Consensus 359 ~~~~~~v~IG~~a~IGags 377 (496)
T 3c8v_A 359 GSESSPLKIGDGCVVMPHT 377 (496)
T ss_dssp CCSSSCEEECTTCEECTTC
T ss_pred CCCCcceEECCCCEECCCC
Confidence 33 666666666554
No 99
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.73 E-value=4.9e-08 Score=83.57 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=8.5
Q ss_pred ceEECCCCEECCCcEEe
Q 016989 316 NAIVGWKSSIGRWSRVQ 332 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~ 332 (379)
+++||+++.|+.++.+.
T Consensus 85 ~~~Ig~~~~i~~~~~i~ 101 (194)
T 3tv0_A 85 PMIIGTNNVFEVGCYSQ 101 (194)
T ss_dssp CEEECSSCEECTTCEEC
T ss_pred ceEECCcceEecceeEe
Confidence 34555555555554443
No 100
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=98.73 E-value=3.7e-08 Score=85.69 Aligned_cols=84 Identities=12% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe-----ceEECCCCEECCCcEEeeccc-----ccccccceEECCCcEECCCc
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT-----NAIVGWKSSIGRWSRVQAEGD-----FNAKLGITILGEAVGVEDEV 356 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~-----~s~ig~~~~ig~~~~i~~~~~-----~~~~~~~sii~~~~~i~~~~ 356 (379)
.+++.+.+++.||+++.|+++| .|. +++||++|.|+++|.|....- ..+....++||++|.|+.+|
T Consensus 49 ~~~a~i~~~v~IG~~~~I~~~~----~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~ 124 (213)
T 3kwd_A 49 HSFSNLIGDVRIKDYVHIAPGT----SIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMA 124 (213)
T ss_dssp CTTSEEEESEEECTTCEECTTC----EEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTC
T ss_pred CCCCEEeCceEECCCCEEcCCc----EEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCc
Confidence 4667777777777777777655 442 468888888888888864100 00011127788888888888
Q ss_pred EEec-cEECCCceeccccc
Q 016989 357 VVTN-SIVLPNKTLNVSVH 374 (379)
Q Consensus 357 ~i~~-~ii~~~~~i~~~~~ 374 (379)
.|.+ ++||+++.||.++.
T Consensus 125 ~I~~~v~Ig~~v~IG~~a~ 143 (213)
T 3kwd_A 125 LIHGPAYIGDGCFIGFRST 143 (213)
T ss_dssp EEEEEEEECTTCEECTTCE
T ss_pred EEcCCCEECCCCEECCCCE
Confidence 7764 77787777777664
No 101
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=98.73 E-value=4.4e-08 Score=88.23 Aligned_cols=57 Identities=12% Similarity=0.218 Sum_probs=36.2
Q ss_pred eceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE-eccEECCCceecccc
Q 016989 315 TNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 315 ~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
.++.||++|.|++++.|..+.... -..++||++|.|+.++.| ++|.||+++.|+.++
T Consensus 82 ~~v~IG~~~~Ig~~~~I~~~~~~~--~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~ 139 (266)
T 3r0s_A 82 SGVVIGKNATIREFATINSGTAKG--DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNA 139 (266)
T ss_dssp CEEEECTTCEECTTCEEECCCTTT--TSEEEECTTCEECTTCEECTTCEECSSCEECTTC
T ss_pred ceEEECCCCEECCceEecCCcccC--CccEEECCCceeCCcceEccccccCCCeEECCCc
Confidence 477888888888888887542110 112677777777777766 466666666655544
No 102
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.73 E-value=3.5e-08 Score=90.69 Aligned_cols=42 Identities=12% Similarity=0.126 Sum_probs=19.6
Q ss_pred CCCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEe
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQ 332 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~ 332 (379)
++++.|.+++.|++++.|+++|+ |+ ++.||++|.|++++.|.
T Consensus 11 ~p~A~I~~~a~Ig~~v~Ig~~~~----I~~~v~IG~~~~I~~~~~I~ 53 (305)
T 3t57_A 11 HPSAVVHPNAVIGKGVSVGPYCT----IGSSVKLGNGCKLYPSSHVF 53 (305)
T ss_dssp CTTSEECTTSEECTTCEECTTCE----ECTTEEECTTCEECTTCEEC
T ss_pred CCCCEECCCCEECCCCEECCCCE----ECCCCEECCCCEECCCcEEC
Confidence 45555555555555555554432 33 34444444444444443
No 103
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=98.73 E-value=2.5e-08 Score=90.73 Aligned_cols=56 Identities=18% Similarity=0.279 Sum_probs=32.2
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE-eccEECCCceecccc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
+++||++|.|+++|.|..+..... ..++||++|.|+.++.| ++|+||+++.|+.++
T Consensus 100 ~v~IG~~~~Ig~~~~I~~g~~~~~--~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~ 156 (283)
T 4eqy_A 100 RLVIGDRNTIREFTTIHTGTVQDA--GVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNA 156 (283)
T ss_dssp EEEECSSCEECTTEEEECCCTTTT--SEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred eEEECCCcccCcceeEccceecCC--CceEECCCcEECceeEEcCCcEECCCcEECCCc
Confidence 556677777777777765322100 12666666666666666 456666555555544
No 104
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.72 E-value=5.9e-08 Score=87.69 Aligned_cols=15 Identities=20% Similarity=0.191 Sum_probs=6.7
Q ss_pred eEECCCCEECCCcEE
Q 016989 317 AIVGWKSSIGRWSRV 331 (379)
Q Consensus 317 s~ig~~~~ig~~~~i 331 (379)
++||++|.|++++.|
T Consensus 71 ~~Ig~~~~I~~~~~i 85 (273)
T 3fs8_A 71 LIIGENALIRTENVI 85 (273)
T ss_dssp EEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEE
Confidence 444444444444444
No 105
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.72 E-value=3.8e-08 Score=82.62 Aligned_cols=64 Identities=3% Similarity=0.050 Sum_probs=41.3
Q ss_pred eEECCCcEECCCCCCCcEEe-----ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECCCcee
Q 016989 296 VYVHPSAKIHPTAKENAVVT-----NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLPNKTL 369 (379)
Q Consensus 296 ~~i~~~~~i~~~~~~~~~i~-----~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~i 369 (379)
+.||+++.|+++| .|. +++||++|.|++++.|.+ ++||++|.||.+|.|. ++.|++++.|
T Consensus 52 v~IG~~~~I~~~~----~I~~~~~~~~~Ig~~~~Ig~~~~i~~----------~~Ig~~~~Ig~~~~i~~~~~Ig~~~~I 117 (173)
T 1xhd_A 52 TIIGDRVNVQDQC----TLHQSPQYPLILEDDVTVGHQVILHS----------CHIKKDALIGMGSIILDGAEIGEGAFI 117 (173)
T ss_dssp EEECTTCEECTTC----EEECCTTCCEEECTTCEECTTCEEES----------CEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EEECCCCEECCCC----EEEeCCCCCeEECCCCEECCCCEEeC----------CEECCCCEEcCCCEEcCCCEECCCCEE
Confidence 4556666665443 454 677777777777777766 6777777777776664 5666666666
Q ss_pred cccc
Q 016989 370 NVSV 373 (379)
Q Consensus 370 ~~~~ 373 (379)
+.++
T Consensus 118 g~~s 121 (173)
T 1xhd_A 118 GAGS 121 (173)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6554
No 106
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.71 E-value=4.8e-08 Score=89.18 Aligned_cols=83 Identities=17% Similarity=0.075 Sum_probs=48.9
Q ss_pred CeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeeccc-------ccccccceEECCCcEECCCcEEe-
Q 016989 289 NATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGD-------FNAKLGITILGEAVGVEDEVVVT- 359 (379)
Q Consensus 289 ~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~-------~~~~~~~sii~~~~~i~~~~~i~- 359 (379)
+..|++++.||+++.|++++ ++.|+ +++||++|.|+.++.|++... ..+...+++||++|.||.||.|.
T Consensus 163 gv~I~p~a~IG~~v~I~~g~--gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilg 240 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGV--GVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLG 240 (313)
T ss_dssp CCEECTTCEECSSCEESSCT--TCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEES
T ss_pred CeEECCCCEECCCEEECCCC--ceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECC
Confidence 44566666666666664442 34555 566666666666666655321 11112235888888888888774
Q ss_pred ccEECCCceecccc
Q 016989 360 NSIVLPNKTLNVSV 373 (379)
Q Consensus 360 ~~ii~~~~~i~~~~ 373 (379)
+++||+++.||.++
T Consensus 241 gv~IG~~a~IGags 254 (313)
T 3q1x_A 241 NIIVGSHVRIGANC 254 (313)
T ss_dssp SCEECSSEEECTTC
T ss_pred CcEECCCCEECCCC
Confidence 66777777776654
No 107
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.71 E-value=3.8e-08 Score=85.06 Aligned_cols=62 Identities=13% Similarity=0.196 Sum_probs=44.5
Q ss_pred CCCeEEec--CeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE
Q 016989 287 TKNATIIG--DVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV 358 (379)
Q Consensus 287 ~~~~~i~~--~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i 358 (379)
.+++.|.+ ++.||+++.|+++| .|. ++.||++|.|+++|.|... -.+++||++|.|+++|.|
T Consensus 42 ~~~~~i~~~~~v~IG~~~~I~~~~----~I~~~v~IG~~~~I~~~~~I~~~------~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 42 SKKASIYNPGVISIGNNVRIDDFC----ILSGKVTIGSYSHIAAYTALYGG------EVGIEMYDFANISSRTIV 106 (205)
T ss_dssp BTTSEEESGGGEEECSSEEECTTC----EEEEEEEECSSEEECTTCEEEEE------EEEEEECTTCEECTTCEE
T ss_pred CCCeEEccCCeeEECCCCEECCCC----EEccceEECCCCEECCCeEEEcC------CccEEECCCCEECCCcEE
Confidence 35566655 67777777777655 565 8999999999999999432 011788888888877777
No 108
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.71 E-value=4.6e-08 Score=89.70 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=11.8
Q ss_pred eEECCCcEECCCcEEe-ccEECCCceecc
Q 016989 344 TILGEAVGVEDEVVVT-NSIVLPNKTLNV 371 (379)
Q Consensus 344 sii~~~~~i~~~~~i~-~~ii~~~~~i~~ 371 (379)
+.||.+|+|++++.|. +|+|+++++|+.
T Consensus 225 v~IG~~a~I~~gv~IG~g~vIgagsvV~~ 253 (316)
T 3tk8_A 225 CFIGARSEVVEGVIVEENSVISMGVYLGQ 253 (316)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CEECCCCEEcCCCEECCCCEEcCCCEEcC
Confidence 4444444444444442 444444444443
No 109
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.70 E-value=2.2e-08 Score=90.75 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=36.5
Q ss_pred eEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceeccccc
Q 016989 317 AIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 317 s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~~ 374 (379)
++||++|.|+++|.|.++ .....-.+++||++|.||.||.| ++.||++++||.++.
T Consensus 231 v~IGdnv~IgpGa~IgG~-~~~~~~~~V~IGdnv~IGAnAtI-GVtIGd~~iIGAGSV 286 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMGT-LSGGGNIVISVGEGCLIGANAGI-GIPLGDRNIVEAGLY 286 (347)
T ss_dssp CEECTTEEECTTCEECC-------CCCCEECTTCEECTTCEE-CSCBCTTCEECTTCE
T ss_pred EEECCCCEECCCCEEccc-cCCCCccceEECCCCEECCCCEE-eeEECCCCEECCCCE
Confidence 667777777777777542 11112233889999999999988 777777777776653
No 110
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=98.70 E-value=6.4e-08 Score=86.96 Aligned_cols=56 Identities=13% Similarity=0.034 Sum_probs=34.2
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE-eccEECCCceecccc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
+++||++|.|+++|.|..+.... -..++||++|.|+.++.| ++|.|++++.|+.++
T Consensus 83 ~~~IG~~~~Ig~~~~I~~~~~~~--~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~ 139 (262)
T 2qia_A 83 RVEIGDRNRIRESVTIHRGTVQG--GGLTKVGSDNLLMINAHIAHDCTVGNRCILANNA 139 (262)
T ss_dssp EEEECSSCEECTTCEEECCCTTT--TSEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred ceEECCCceeCCCCEEcCCccCC--CCcCEECCCcEEeeeeEECCCCEECCCeEECCcc
Confidence 56677777777777776531100 012777777777777776 466666665555543
No 111
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.70 E-value=6.4e-08 Score=83.20 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=40.0
Q ss_pred ecCeEECCCcEECCCCCCCcEEe---ceEECCCCEECCCcEEeecccc--------cc-cccceEECCCcEECCCcEE--
Q 016989 293 IGDVYVHPSAKIHPTAKENAVVT---NAIVGWKSSIGRWSRVQAEGDF--------NA-KLGITILGEAVGVEDEVVV-- 358 (379)
Q Consensus 293 ~~~~~i~~~~~i~~~~~~~~~i~---~s~ig~~~~ig~~~~i~~~~~~--------~~-~~~~sii~~~~~i~~~~~i-- 358 (379)
+.++.||+++.|+++| .|. ..+||++|.||++|.|.....- .. ....++||++|.||.+|.|
T Consensus 72 g~~~~IG~~~~I~~~~----~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~ 147 (199)
T 3ftt_A 72 GWNVKLGKNVYVNTNC----YFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLP 147 (199)
T ss_dssp STTEEECSSEEECTTE----EEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECT
T ss_pred cCCcEECCCeEECCCe----EEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECC
Confidence 3445555555555443 442 3578888888888877432100 00 0111345555555555544
Q ss_pred ----e-ccEECCCceeccccc
Q 016989 359 ----T-NSIVLPNKTLNVSVH 374 (379)
Q Consensus 359 ----~-~~ii~~~~~i~~~~~ 374 (379)
. +|+|+++++|..+++
T Consensus 148 gv~IG~~~vIgagsvV~~dvp 168 (199)
T 3ftt_A 148 GVTIGEGSVIGAGSVVTKDIP 168 (199)
T ss_dssp TCEECTTCEECTTCEECSCBC
T ss_pred CCEECCCCEECCCCEECcccC
Confidence 2 556666666665555
No 112
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=98.70 E-value=4.4e-08 Score=88.19 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=34.8
Q ss_pred eceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE-eccEECCCceecccc
Q 016989 315 TNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 315 ~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
.+++||++|.|+++|.|..+.... -..++||++|.|+.++.| ++|+|++++.|+.++
T Consensus 84 ~~~~IG~~~~Ig~~~~I~~g~~~~--~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~ 141 (265)
T 4e6u_A 84 TWLEIGNNNLIREHCSLHRGTVQD--NALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNV 141 (265)
T ss_dssp CEEEECSSCEECTTCEEECCCTTT--TSEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred CeEEECCCeEECCceEECcccccC--CCceEEccCcEEeeeeEEcccEEECCCcEEcCCc
Confidence 367777777778887776432100 012777777777777766 466666665555544
No 113
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=98.69 E-value=9.7e-08 Score=86.27 Aligned_cols=42 Identities=19% Similarity=0.156 Sum_probs=23.0
Q ss_pred CCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEee
Q 016989 288 KNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQA 333 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~ 333 (379)
+++.|++++.|++++.|+++| .|. ++.||++|.|+++|.|++
T Consensus 13 ~~a~I~~~~~Ig~~~~Ig~~~----~I~~~v~Ig~~~~I~~~~~I~~ 55 (273)
T 3fs8_A 13 EGVIIGENVTIEDNVYIDYGC----IIRDNVHIKKGSFIGARSILGE 55 (273)
T ss_dssp TTCEECSSEEECTTCEECTTC----EECSSEEECTTCEECTTCEEEE
T ss_pred CCcEECCCCEECCCcEECCCC----EECCCCEECCCcEECCCcEeCC
Confidence 445555555555555555443 444 556666666666655554
No 114
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.69 E-value=4.7e-08 Score=82.11 Aligned_cols=51 Identities=27% Similarity=0.240 Sum_probs=35.3
Q ss_pred CCcEEeceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe-ccEECCCcee
Q 016989 310 ENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT-NSIVLPNKTL 369 (379)
Q Consensus 310 ~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~i 369 (379)
.++.|.+++||++|.||+++.|.++ +.||++|.|+.++.|. ++.|++++.+
T Consensus 82 ~~~~i~~~~Ig~~~~Ig~~~~i~~~---------~~Ig~~~~Ig~~s~V~~~~~i~~~~~v 133 (173)
T 1v3w_A 82 HNAMVHGAKVGNYVIIGISSVILDG---------AKIGDHVIIGAGAVVPPNKEIPDYSLV 133 (173)
T ss_dssp TTCEEESCEECSSEEECTTCEECTT---------CEECSSEEECTTCEECTTCEECTTEEE
T ss_pred CCCEECCCEECCCCEECCCCEEeCC---------CEECCCCEECCCCEECCCcEeCCCcEE
Confidence 3445666667777777777776665 7777777777777775 4677777776
No 115
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.68 E-value=6.5e-08 Score=82.38 Aligned_cols=63 Identities=14% Similarity=0.235 Sum_probs=40.1
Q ss_pred EECCCcEECCCCCCCcEEec------------eEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE-eccEE
Q 016989 297 YVHPSAKIHPTAKENAVVTN------------AIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV-TNSIV 363 (379)
Q Consensus 297 ~i~~~~~i~~~~~~~~~i~~------------s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i-~~~ii 363 (379)
.||+++.|+++| .|.. ++||++|.||++|.|.+ ++||++|.||.+|.| .++.|
T Consensus 60 ~IG~~~~I~~~~----~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~----------~~Ig~~~~Ig~~~~i~~~v~I 125 (189)
T 3r1w_A 60 RIGARTSVQDGS----VLHITHASDYNPGGYPLIIGDDVTIGHQAMLHG----------CTIGNRVLIGMKSMIMDGAIV 125 (189)
T ss_dssp EECTTCEECTTC----EEECBCCSSSSTTCBCEEECSSEEECTTCEEES----------CEECSSEEECTTCEECTTCEE
T ss_pred EECCCCEECCCC----EEecCCcccCCCCCCCeEECCCCEECCCCEEeC----------cEECCCcEECCCCEEcCCCEE
Confidence 556666666544 4443 48888888888887766 677777777777766 35555
Q ss_pred CCCceecccc
Q 016989 364 LPNKTLNVSV 373 (379)
Q Consensus 364 ~~~~~i~~~~ 373 (379)
++++.|+.++
T Consensus 126 g~~~~Ig~~s 135 (189)
T 3r1w_A 126 EDEVIVAAGA 135 (189)
T ss_dssp CSSCEECTTC
T ss_pred CCCCEEccCC
Confidence 5555555543
No 116
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.67 E-value=4.3e-08 Score=84.00 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=44.8
Q ss_pred eEEecCeEECCCcEECCCCCCCcEEe---ceEECCCCEECCCcEEeeccc--------ccc-cccceEECCCcEECCCcE
Q 016989 290 ATIIGDVYVHPSAKIHPTAKENAVVT---NAIVGWKSSIGRWSRVQAEGD--------FNA-KLGITILGEAVGVEDEVV 357 (379)
Q Consensus 290 ~~i~~~~~i~~~~~i~~~~~~~~~i~---~s~ig~~~~ig~~~~i~~~~~--------~~~-~~~~sii~~~~~i~~~~~ 357 (379)
+.+++++.||+++.|+++| .|. ..+||++|.||++|.|..+.- ... ...+++||++|.||.+|.
T Consensus 71 ~~ig~~v~IG~~~~I~~~~----~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~ 146 (195)
T 3nz2_A 71 CEFGKTIRIGDHTFINMNV----VMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVV 146 (195)
T ss_dssp ESCSTTEEECTTCEECTTE----EEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCE
T ss_pred EEeCCCeEECCCcEECcCC----EEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCE
Confidence 3344455666666666444 452 348888888888888765321 000 112256666666666665
Q ss_pred Ee-------ccEECCCceeccccc
Q 016989 358 VT-------NSIVLPNKTLNVSVH 374 (379)
Q Consensus 358 i~-------~~ii~~~~~i~~~~~ 374 (379)
|. +|+|+++++|..+++
T Consensus 147 I~~gv~IG~~~vIgagsvV~~dvp 170 (195)
T 3nz2_A 147 INQGVTIGARSVVAANSVVNQDVP 170 (195)
T ss_dssp ECTTCEECTTCEECTTCEECSCBC
T ss_pred ECCCCEECCCCEECCCCEEccccC
Confidence 52 455555555555554
No 117
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.67 E-value=5.9e-08 Score=92.67 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=22.8
Q ss_pred CCcEEeceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEe
Q 016989 310 ENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVT 359 (379)
Q Consensus 310 ~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~ 359 (379)
.++.|.+++||++|.|++++.|.+ ++||++|.||.+|.|.
T Consensus 291 ~~~~i~~~~i~~~~~i~~~~~i~~----------~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 291 ASVEVKESVIMEGSKIPHLSYVGD----------SVIAEDVNFGAGTLIA 330 (401)
T ss_dssp ETCEEESEEECTTCEEEESCEEES----------CEECTTCEECTTCEEC
T ss_pred CCCEEecCEEcCCcEECCCceEcc----------eEECCCcEECCCcEEc
Confidence 334455555566555555555544 6666666666666654
No 118
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.66 E-value=7.4e-08 Score=85.73 Aligned_cols=49 Identities=20% Similarity=0.182 Sum_probs=37.2
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceecccc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLNVSV 373 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~ 373 (379)
+++||++|.||++|.|.++ ++||++|.||.+|.|.++.|++++.|+.++
T Consensus 140 ~v~IG~~v~Ig~~~~I~~~---------~~Ig~~v~IG~~a~I~~v~Ig~~~~Igags 188 (247)
T 1qre_A 140 AVYIGNNVSLAHQSQVHGP---------AAVGDDTFIGMQAFVFKSKVGNNCVLEPRS 188 (247)
T ss_dssp SEEECTTCEECTTCEEEEE---------EEECTTCEECTTCEEEEEEECTTCEECTTC
T ss_pred ceEECCCCEECCCCEEcCC---------cEECCCCEECCCCEEeceEECCCCEECCCC
Confidence 4899999999999998886 777777777777777556666666665554
No 119
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.66 E-value=6.5e-08 Score=86.37 Aligned_cols=74 Identities=18% Similarity=0.092 Sum_probs=46.4
Q ss_pred CeEECCCcEECCCCCCCcEEe----ceEECCCCEECCCcEEeeccc----------ccccccceEECCCcEECCCcEEe-
Q 016989 295 DVYVHPSAKIHPTAKENAVVT----NAIVGWKSSIGRWSRVQAEGD----------FNAKLGITILGEAVGVEDEVVVT- 359 (379)
Q Consensus 295 ~~~i~~~~~i~~~~~~~~~i~----~s~ig~~~~ig~~~~i~~~~~----------~~~~~~~sii~~~~~i~~~~~i~- 359 (379)
.+.||+++.|+++| .|. ++.||++|.||++|.|.++.- ......+++||++|.||.+|.|.
T Consensus 105 ~v~IG~~~~Ig~~~----~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~ 180 (252)
T 3jqy_B 105 KVIIGRRTTIGAGF----EVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMK 180 (252)
T ss_dssp EEEECTTCEECTTC----EEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECT
T ss_pred EEEECCCCEECCCc----EEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECC
Confidence 55667777777554 455 899999999999999977410 01112235667777766666553
Q ss_pred ccEECCCceeccc
Q 016989 360 NSIVLPNKTLNVS 372 (379)
Q Consensus 360 ~~ii~~~~~i~~~ 372 (379)
++.||++++|+.+
T Consensus 181 gv~IG~~~~Igag 193 (252)
T 3jqy_B 181 GVSVGSGSVIGYG 193 (252)
T ss_dssp TCEECTTCEECTT
T ss_pred CCEECCCCEECCC
Confidence 5555555555544
No 120
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.66 E-value=4.8e-08 Score=90.32 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=28.3
Q ss_pred eEEec-CeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCc
Q 016989 290 ATIIG-DVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNK 367 (379)
Q Consensus 290 ~~i~~-~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~ 367 (379)
++|.+ ++.|++++.|+++| .|. +++||++|.||++|.|.+ |+|++++.|+++++|.+|+|++++
T Consensus 59 ~~I~~~~a~I~~~a~I~~~~----~I~g~~~Ig~~~~Ig~~~~I~~----------~~Ig~~~~I~~~s~I~~s~I~~~~ 124 (334)
T 2pig_A 59 CWIYDENAMAFAGTEITGNA----RITQPCTLYNNVRIGDNVWIDR----------ADISDGARISDNVTIQSSSVREEC 124 (334)
T ss_dssp CEECCTTCEEETTCEECTTC----EEESSCEEESSCEECTTCEEES----------CEEESSCEECTTCEEESCEEESSE
T ss_pred eEEcCCCeEEcCCcEECCCc----EEeeeeeECCCcEECCCCEEEe----------EEEcCCCEEeCCcEEeccEEcCCe
Confidence 34444 44444444444332 233 444444444444444443 444444444444444444443333
Q ss_pred ee
Q 016989 368 TL 369 (379)
Q Consensus 368 ~i 369 (379)
.|
T Consensus 125 ~I 126 (334)
T 2pig_A 125 AI 126 (334)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 121
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.65 E-value=4.4e-08 Score=95.13 Aligned_cols=72 Identities=17% Similarity=0.244 Sum_probs=55.8
Q ss_pred CeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCc
Q 016989 289 NATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNK 367 (379)
Q Consensus 289 ~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~ 367 (379)
++.+.+++.||+++.|+++| .|. +++||++|.|+++|.|.+ |+||++|.|+++|.|.+++||+++
T Consensus 259 ~~~i~~~~~ig~~~~I~~~~----~i~~~~~Ig~~~~I~~~~~i~~----------~~ig~~~~I~~~~~i~~~~ig~~~ 324 (456)
T 2v0h_A 259 RFDLRGTLEHGKDVEIDVNV----IIEGNVKLGDRVKIGTGCVLKN----------VVIGNDVEIKPYSVLEDSIVGEKA 324 (456)
T ss_dssp GEEEEEEEEECSSCEECSSE----EEEEEEEECTTCEECTTCEEEE----------EEECTTCEECSSCEEEEEEECTTC
T ss_pred ccEEcCceEECCCCEEcCCc----EEcCCcEECCCCEECCCCEEEe----------EEEeCCCEEcCCeEEccCcCCCCc
Confidence 56777788888888888654 454 788888888888888875 888888888888888777777777
Q ss_pred eeccccc
Q 016989 368 TLNVSVH 374 (379)
Q Consensus 368 ~i~~~~~ 374 (379)
.|++++.
T Consensus 325 ~I~~~~~ 331 (456)
T 2v0h_A 325 AIGPFSR 331 (456)
T ss_dssp EECSSEE
T ss_pred EECCccE
Confidence 7777654
No 122
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.65 E-value=9.2e-08 Score=81.58 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=15.7
Q ss_pred eEECCCcEECCCcEEe-ccEECCCceeccccc
Q 016989 344 TILGEAVGVEDEVVVT-NSIVLPNKTLNVSVH 374 (379)
Q Consensus 344 sii~~~~~i~~~~~i~-~~ii~~~~~i~~~~~ 374 (379)
+.||.+|+|.+|++|. +|+|+++++|..+++
T Consensus 141 v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp 172 (190)
T 3hjj_A 141 VWVGGGAIINPGVSIGDNAVIASGAVVTKDVP 172 (190)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBC
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECcccC
Confidence 4555555555555552 555555555555544
No 123
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=98.65 E-value=6.6e-08 Score=86.72 Aligned_cols=87 Identities=16% Similarity=0.228 Sum_probs=48.7
Q ss_pred CCCeEEecCeEECCCcEECCCCC--------CCcEEe-ceEECCCCEECCCcEEeecccc---------ccc-ccceEEC
Q 016989 287 TKNATIIGDVYVHPSAKIHPTAK--------ENAVVT-NAIVGWKSSIGRWSRVQAEGDF---------NAK-LGITILG 347 (379)
Q Consensus 287 ~~~~~i~~~~~i~~~~~i~~~~~--------~~~~i~-~s~ig~~~~ig~~~~i~~~~~~---------~~~-~~~sii~ 347 (379)
++++.|.+++.|++++.|+++|+ ++|.|. +++|+.++.||++|.|..+.+. .++ ..+++||
T Consensus 4 ~p~a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG 83 (259)
T 3hsq_A 4 HPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIG 83 (259)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEEC
T ss_pred CCCcEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEEC
Confidence 34555555555555555555444 444444 5555555555555555554321 111 3557788
Q ss_pred CCcEECCCcEEe-------ccEECCCceecccc
Q 016989 348 EAVGVEDEVVVT-------NSIVLPNKTLNVSV 373 (379)
Q Consensus 348 ~~~~i~~~~~i~-------~~ii~~~~~i~~~~ 373 (379)
++|.|+++|.|. .++||+++.|++++
T Consensus 84 ~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~ 116 (259)
T 3hsq_A 84 DHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNS 116 (259)
T ss_dssp SSCEECTTCEEECCSBTTBCEEECSSCEECTTC
T ss_pred CCcEECCCCEECCCccCCCcEEECCCcEEcCCc
Confidence 888888888886 45555555554443
No 124
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.63 E-value=9.3e-08 Score=82.16 Aligned_cols=44 Identities=23% Similarity=0.263 Sum_probs=33.7
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|..+ +.||++|.||.++.|...+ .+++++
T Consensus 130 ~v~IG~~v~IG~~~~I~~g---------v~IG~~~vIgagsvV~~dv-p~~~v~ 173 (199)
T 3ftt_A 130 PIHIGSNTWFGGHVAVLPG---------VTIGEGSVIGAGSVVTKDI-PPHSLA 173 (199)
T ss_dssp CEEECSSEEECTTCEECTT---------CEECTTCEECTTCEECSCB-CTTEEE
T ss_pred CeEEcCCcEEcCCCEECCC---------CEECCCCEECCCCEECccc-CCCCEE
Confidence 5578888888888888877 8888888888888887654 444443
No 125
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.63 E-value=8.4e-08 Score=87.68 Aligned_cols=72 Identities=15% Similarity=0.057 Sum_probs=35.1
Q ss_pred CcEECCCCC--CCcEEe-ceEECCCCEECCCcEEeecc----cccccc-cceEECCCcEECCCcEEe-ccEECCCceecc
Q 016989 301 SAKIHPTAK--ENAVVT-NAIVGWKSSIGRWSRVQAEG----DFNAKL-GITILGEAVGVEDEVVVT-NSIVLPNKTLNV 371 (379)
Q Consensus 301 ~~~i~~~~~--~~~~i~-~s~ig~~~~ig~~~~i~~~~----~~~~~~-~~sii~~~~~i~~~~~i~-~~ii~~~~~i~~ 371 (379)
+++|+++|. .++.|+ ++.||++|.|++++.|.+.. .....| ++|.||.+|+|.+++.|. +|+|+++++|..
T Consensus 158 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~ 237 (304)
T 3eg4_A 158 GAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGK 237 (304)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCCEEcC
Confidence 444444544 445565 46666666666655443300 000111 115555555555555553 555555555554
Q ss_pred c
Q 016989 372 S 372 (379)
Q Consensus 372 ~ 372 (379)
+
T Consensus 238 g 238 (304)
T 3eg4_A 238 S 238 (304)
T ss_dssp T
T ss_pred C
Confidence 3
No 126
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.62 E-value=1.5e-07 Score=80.16 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=35.2
Q ss_pred CeEECCCcEECCCCCCCcEEe---ceEECCCCEECCCcEEeeccc-c-------ccc-ccceEECCCcEECCCcEEe-cc
Q 016989 295 DVYVHPSAKIHPTAKENAVVT---NAIVGWKSSIGRWSRVQAEGD-F-------NAK-LGITILGEAVGVEDEVVVT-NS 361 (379)
Q Consensus 295 ~~~i~~~~~i~~~~~~~~~i~---~s~ig~~~~ig~~~~i~~~~~-~-------~~~-~~~sii~~~~~i~~~~~i~-~~ 361 (379)
++.||+++.++++| .|. ...||++|.||++|.|....- . ... -..++||++|.||.+|.|. ++
T Consensus 76 ~~~IG~~~~i~~~~----~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv 151 (188)
T 3srt_A 76 NIHVGENFFANYDC----IFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGI 151 (188)
T ss_dssp TEEECTTEEECTTE----EEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTC
T ss_pred CeEECCcccccCce----EEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCc
Confidence 44455555555443 333 336777777777777732110 0 000 0125566666665555553 44
Q ss_pred EECCCceecc
Q 016989 362 IVLPNKTLNV 371 (379)
Q Consensus 362 ii~~~~~i~~ 371 (379)
+||++++|+.
T Consensus 152 ~IG~~~vIga 161 (188)
T 3srt_A 152 TIGDNVVIGA 161 (188)
T ss_dssp EECSSEEECT
T ss_pred EECCCCEECC
Confidence 4444444443
No 127
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.62 E-value=5.5e-08 Score=94.55 Aligned_cols=71 Identities=14% Similarity=0.230 Sum_probs=38.9
Q ss_pred CeEEecCeEECCCcEECCCCCCCcEE-eceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCc
Q 016989 289 NATIIGDVYVHPSAKIHPTAKENAVV-TNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNK 367 (379)
Q Consensus 289 ~~~i~~~~~i~~~~~i~~~~~~~~~i-~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~ 367 (379)
...+.+++.|++++.|+++| .| .++.||++|.|+++|.|.+ ++||++|.|+++|.|.+++||+++
T Consensus 262 ~~~~~~~~~ig~~~~i~~~~----~i~~~~~ig~~~~I~~~~~i~~----------~~Ig~~~~I~~~~~i~~~~Ig~~~ 327 (459)
T 4fce_A 262 RFDLRGELTHGRDITIDTNV----IIEGHVILGDRVRIGTGCVLKN----------CVIGDDSEISPYTVLEDARLDANC 327 (459)
T ss_dssp GEEEEEEEEECSSCEECTTE----EEEEEEEECTTCEECTTCEEES----------CEECTTCEECSSCEEESCEECTTC
T ss_pred eEEEeCcEEECCCcEECCCe----eeccceEECCCCEECCCCEEec----------cEECCCCEECCCcEEeCCEECCCC
Confidence 34455555555555555443 23 3555666666666666554 555666666555555555555555
Q ss_pred eecccc
Q 016989 368 TLNVSV 373 (379)
Q Consensus 368 ~i~~~~ 373 (379)
.|++++
T Consensus 328 ~ig~~~ 333 (459)
T 4fce_A 328 TVGPFA 333 (459)
T ss_dssp EECSSE
T ss_pred EECCcc
Confidence 555544
No 128
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.62 E-value=1e-07 Score=86.10 Aligned_cols=72 Identities=15% Similarity=0.082 Sum_probs=38.3
Q ss_pred CcEECCCCC--CCcEEe-ceEECCCCEECCCcEEeecc----cccccc-cceEECCCcEECCCcEEe-ccEECCCceecc
Q 016989 301 SAKIHPTAK--ENAVVT-NAIVGWKSSIGRWSRVQAEG----DFNAKL-GITILGEAVGVEDEVVVT-NSIVLPNKTLNV 371 (379)
Q Consensus 301 ~~~i~~~~~--~~~~i~-~s~ig~~~~ig~~~~i~~~~----~~~~~~-~~sii~~~~~i~~~~~i~-~~ii~~~~~i~~ 371 (379)
+++|+++|. .++.|. ++.||++|.|++++.|.+.. ...+.| +++.||.+|+|.++++|. +|+|+++++|.+
T Consensus 133 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~ 212 (276)
T 3gos_A 133 GAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQ 212 (276)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECC
Confidence 455555544 455666 46777777776666553200 001111 126666666666666664 566666666665
Q ss_pred c
Q 016989 372 S 372 (379)
Q Consensus 372 ~ 372 (379)
+
T Consensus 213 ~ 213 (276)
T 3gos_A 213 S 213 (276)
T ss_dssp T
T ss_pred C
Confidence 3
No 129
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=98.61 E-value=1.4e-07 Score=84.98 Aligned_cols=57 Identities=16% Similarity=0.202 Sum_probs=34.7
Q ss_pred eceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEE-eccEECCCceecccc
Q 016989 315 TNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVV-TNSIVLPNKTLNVSV 373 (379)
Q Consensus 315 ~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i-~~~ii~~~~~i~~~~ 373 (379)
.+++||++|.|+++|.|..+.... -..++||++|.|+.+++| ++|+||+++.|+.++
T Consensus 78 ~~~~IG~~~~I~~~~~I~~~~~~~--~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~ 135 (270)
T 1j2z_A 78 SELIIGEDNLIREFCMINPGTEGG--IKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGV 135 (270)
T ss_dssp CEEEECSSCEECTTCEECCCCTTT--TSEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred cceEECCCCEECCCeEEcCCeecC--CccEEECCCcEECcccccCCCcEECCCcEEcCCc
Confidence 456677777777777776542110 013677777777777766 366666666655543
No 130
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.61 E-value=8.5e-08 Score=87.35 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=15.3
Q ss_pred eEECCCcEECCCcEEe-ccEECCCceeccccc
Q 016989 344 TILGEAVGVEDEVVVT-NSIVLPNKTLNVSVH 374 (379)
Q Consensus 344 sii~~~~~i~~~~~i~-~~ii~~~~~i~~~~~ 374 (379)
+.||.+|+|..+++|. +|+||++++|..+++
T Consensus 258 V~IGaga~Il~gv~IGd~a~IGagsvV~~dVp 289 (310)
T 3f1x_A 258 VIVYSNATILGRVTIGKGATVGGNIWVTENVP 289 (310)
T ss_dssp CEECTTCEEESSCEECTTCEECSSCEECSCBC
T ss_pred cEEcCCCEECCCcEECCCCEECCCCEECCccC
Confidence 4444444444444442 455555555554444
No 131
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.60 E-value=6.5e-08 Score=90.19 Aligned_cols=56 Identities=14% Similarity=0.082 Sum_probs=36.8
Q ss_pred EECCCCEECCCcEEeeccc-----ccccccceEECCCcEECCCcEEeccEECCCceeccccc
Q 016989 318 IVGWKSSIGRWSRVQAEGD-----FNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 318 ~ig~~~~ig~~~~i~~~~~-----~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~~ 374 (379)
.||++|.||++|.|+.+.. .......++||++|.||.+|. .++.||++++||.++.
T Consensus 260 ~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv-~GV~IGdgavIGAGsV 320 (387)
T 2rij_A 260 RISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV-TGIPLGDNCIVDAGIA 320 (387)
T ss_dssp EECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE-ECSCBCTTCEECTTCE
T ss_pred EECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc-CCcEECCCCEECCCCE
Confidence 4555666666666655531 111222388999999999988 7777777777777653
No 132
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=98.59 E-value=2e-07 Score=87.91 Aligned_cols=45 Identities=29% Similarity=0.302 Sum_probs=27.4
Q ss_pred CCCCeEEecCeEECCCcEECCCCCCCcEEe-ceEECCCCEECCCcEEeec
Q 016989 286 GTKNATIIGDVYVHPSAKIHPTAKENAVVT-NAIVGWKSSIGRWSRVQAE 334 (379)
Q Consensus 286 ~~~~~~i~~~~~i~~~~~i~~~~~~~~~i~-~s~ig~~~~ig~~~~i~~~ 334 (379)
.++++.|.+++.|++++.|+++|+ |. ++.||++|.|+++|.|+++
T Consensus 122 i~p~a~i~~~a~Ig~~~~I~~~~~----I~~~v~IG~~~~I~~~~~Ig~~ 167 (372)
T 3pmo_A 122 IHPTAIVAADAEVDPSASVGAYAV----IESGARIGAGVSIGAHCVIGAR 167 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTCE----ECTTCEECTTCEECTTCEECTT
T ss_pred cCCCCEECCCCEECCCCEECCCCE----ECCCCEECCCCEECCCCEECCC
Confidence 457777777777777777776654 43 4555555555555555443
No 133
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.59 E-value=1.2e-07 Score=80.18 Aligned_cols=75 Identities=9% Similarity=0.063 Sum_probs=40.5
Q ss_pred cCeEECCCcEECCCCCCCcEE---eceEECCCCEECCCcEEeeccc--------cccc-ccceEECCCcEECCCcEEe-c
Q 016989 294 GDVYVHPSAKIHPTAKENAVV---TNAIVGWKSSIGRWSRVQAEGD--------FNAK-LGITILGEAVGVEDEVVVT-N 360 (379)
Q Consensus 294 ~~~~i~~~~~i~~~~~~~~~i---~~s~ig~~~~ig~~~~i~~~~~--------~~~~-~~~sii~~~~~i~~~~~i~-~ 360 (379)
.++.||+++.|+++| .| ....||++|.|+++|.|....- .... ..+++||++|.||.+|.|. +
T Consensus 71 ~~v~IG~~~~I~~~~----~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~g 146 (182)
T 1ocx_A 71 YNIFLGNNFFANFDC----VMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPG 146 (182)
T ss_dssp TTEEECSSEEECSSE----EEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTT
T ss_pred CCEEECCCcEEeCCe----EEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCC
Confidence 445555555555443 34 2568888888888888853110 0000 1236666666666666653 4
Q ss_pred cEECCCceeccc
Q 016989 361 SIVLPNKTLNVS 372 (379)
Q Consensus 361 ~ii~~~~~i~~~ 372 (379)
+.||++++|+.+
T Consensus 147 v~IG~~~vIgag 158 (182)
T 1ocx_A 147 VTIGDNVVVASG 158 (182)
T ss_dssp CEECTTCEECTT
T ss_pred cEECCCCEECCC
Confidence 455555544443
No 134
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=98.58 E-value=1.3e-07 Score=86.80 Aligned_cols=22 Identities=18% Similarity=0.045 Sum_probs=11.3
Q ss_pred CcEEe-ceEECCCCEECCCcEEe
Q 016989 311 NAVVT-NAIVGWKSSIGRWSRVQ 332 (379)
Q Consensus 311 ~~~i~-~s~ig~~~~ig~~~~i~ 332 (379)
++.|. ++.||++|.|++++.|.
T Consensus 49 ~~~I~g~~~IG~~~~I~~~a~I~ 71 (305)
T 3t57_A 49 SSHVFGNTELGESCVLMTGAVVG 71 (305)
T ss_dssp TCEECSSEEECTTCEECTTCEEC
T ss_pred CcEECCCcEECCCcEEccCcEec
Confidence 34444 55555555555555554
No 135
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.56 E-value=1.7e-07 Score=79.76 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=21.2
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEecc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNS 361 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ 361 (379)
+++||++|.||.+|.|..+ +.||++|.||.++.|...
T Consensus 132 ~v~IG~~v~IG~~~~I~~g---------v~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 132 PVKIGDNVWIGGGVIITPG---------ITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECSSEEECTTCEECSC
T ss_pred CcEECCCcEEcCCCEECCC---------cEECCCCEECCCCEECcc
Confidence 4555555555555555555 555555555555555544
No 136
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.56 E-value=1.5e-07 Score=79.84 Aligned_cols=77 Identities=12% Similarity=0.085 Sum_probs=42.8
Q ss_pred ecCeEECCCcEECCCCCCCcEE---eceEECCCCEECCCcEEeeccc--------cccc-ccceEECCCcEECCCcEEe-
Q 016989 293 IGDVYVHPSAKIHPTAKENAVV---TNAIVGWKSSIGRWSRVQAEGD--------FNAK-LGITILGEAVGVEDEVVVT- 359 (379)
Q Consensus 293 ~~~~~i~~~~~i~~~~~~~~~i---~~s~ig~~~~ig~~~~i~~~~~--------~~~~-~~~sii~~~~~i~~~~~i~- 359 (379)
+.++.||+++.++++| .| .+..||++|.||++|.|....- .... ..+++||++|.||.+|.|.
T Consensus 72 g~~v~IG~~~~i~~~~----~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~ 147 (185)
T 2p2o_A 72 GYNIHVGENFFMNFDG----VILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINP 147 (185)
T ss_dssp STTEEECTTEEECSSE----EEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECT
T ss_pred cCCEEECCeeEEcCCe----EEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECC
Confidence 4455556666665443 34 4678888888888888853210 0000 1126667766666666664
Q ss_pred ccEECCCceecccc
Q 016989 360 NSIVLPNKTLNVSV 373 (379)
Q Consensus 360 ~~ii~~~~~i~~~~ 373 (379)
+++||++++|+.++
T Consensus 148 gv~IG~~~vIgags 161 (185)
T 2p2o_A 148 GVTIGDNAVIASGA 161 (185)
T ss_dssp TCEECTTCEECTTC
T ss_pred CCEECCCCEECCCC
Confidence 55555555555443
No 137
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.55 E-value=1.4e-07 Score=92.06 Aligned_cols=20 Identities=10% Similarity=0.179 Sum_probs=8.6
Q ss_pred CCeEEecCeEECCCcEECCC
Q 016989 288 KNATIIGDVYVHPSAKIHPT 307 (379)
Q Consensus 288 ~~~~i~~~~~i~~~~~i~~~ 307 (379)
+++.|.+++.||+++.|+++
T Consensus 285 ~~~~i~~~~~ig~~~~I~~~ 304 (468)
T 1hm9_A 285 ANVILKGQTKIGAETVLTNG 304 (468)
T ss_dssp SSCEEESSCEECTTCEECTT
T ss_pred CCcEECCCCEECCCCEECCC
Confidence 33444444444444444433
No 138
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.55 E-value=1.6e-07 Score=82.06 Aligned_cols=31 Identities=10% Similarity=0.115 Sum_probs=19.7
Q ss_pred ceEECCCcEECCCcEEe-ccEECCCceecccc
Q 016989 343 ITILGEAVGVEDEVVVT-NSIVLPNKTLNVSV 373 (379)
Q Consensus 343 ~sii~~~~~i~~~~~i~-~~ii~~~~~i~~~~ 373 (379)
.++||++|.||.+|.|. ++.||++++|++++
T Consensus 119 ~v~IG~~v~IG~~a~I~~gv~IG~gavIgags 150 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEA 150 (220)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred CeEECCCcEECCCCEEeCCCEECCCCEEcCCC
Confidence 36677777777777764 55555555555543
No 139
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=98.53 E-value=2.3e-07 Score=87.76 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=23.2
Q ss_pred eEECCCcEECCCcEEe---------------------ccEECCCceeccccc
Q 016989 344 TILGEAVGVEDEVVVT---------------------NSIVLPNKTLNVSVH 374 (379)
Q Consensus 344 sii~~~~~i~~~~~i~---------------------~~ii~~~~~i~~~~~ 374 (379)
+.||++|.|+.++.|. +++|++++.||+++.
T Consensus 191 ~~IG~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~ 242 (374)
T 2iu8_A 191 VSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTT 242 (374)
T ss_dssp EEECTTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCE
T ss_pred ceECCCCEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcE
Confidence 7778888888777773 377888888887764
No 140
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.52 E-value=2e-07 Score=86.13 Aligned_cols=35 Identities=6% Similarity=0.008 Sum_probs=23.0
Q ss_pred cccceEECCCcEECCCcEEeccEECCCceeccccc
Q 016989 340 KLGITILGEAVGVEDEVVVTNSIVLPNKTLNVSVH 374 (379)
Q Consensus 340 ~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~~ 374 (379)
.+.+|+|+++|.|+.+|.|.+|+|++++.|++++.
T Consensus 159 ~I~~s~I~~g~~I~~~a~I~~svI~~~a~I~~~a~ 193 (334)
T 2pig_A 159 TVNHSRIVHQVQLYGNATITHAFIEHRAEVFDFAL 193 (334)
T ss_dssp EEESCEEETTCEECTTCEEESEEECTTCEECTTCE
T ss_pred EEeccEEcCCCEEcCCeEEeCcEEcCCCEECCCcE
Confidence 44456666667777777777777777777766543
No 141
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.52 E-value=1.6e-07 Score=79.41 Aligned_cols=45 Identities=24% Similarity=0.308 Sum_probs=30.5
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceec
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLN 370 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~ 370 (379)
+++||++|.||++|.|..+ +.||++|+||.|+.|... |.+++.+.
T Consensus 128 ~v~IG~~v~Ig~~a~I~~g---------v~IG~~~vIgagsvV~~d-ip~~~vv~ 172 (182)
T 1ocx_A 128 PVTIGNNVWIGGRAVINPG---------VTIGDNVVVASGAVVTKD-VPDNVVVG 172 (182)
T ss_dssp CEEECTTCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCSSEEEE
T ss_pred CeEEeCCeEECCCCEECCC---------cEECCCCEECCCCEECCc-CCCCcEEE
Confidence 5677777777777777666 777777777777777654 45555543
No 142
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.51 E-value=2e-07 Score=83.86 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=39.8
Q ss_pred cCeEECCCcEECCCCC--CCcEEec---------eEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccE
Q 016989 294 GDVYVHPSAKIHPTAK--ENAVVTN---------AIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSI 362 (379)
Q Consensus 294 ~~~~i~~~~~i~~~~~--~~~~i~~---------s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~i 362 (379)
.+++||+++.|+++|. .+++|++ ++||++|.||++|.|.++ ++||++|+||.|+.|...+
T Consensus 183 ~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~g---------v~IG~~a~IGagsvV~kdV 253 (287)
T 3mc4_A 183 TGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGN---------IQVGQCSKIAAGSVVLKSV 253 (287)
T ss_dssp TTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESS---------CEECTTCEECTTCEECSCB
T ss_pred CCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCC---------cEECCCCEECCCCEEcccc
Confidence 3445555555555554 4555553 577777777777777776 7888888888888776543
No 143
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.51 E-value=1.9e-07 Score=79.11 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=34.4
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceecc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLNV 371 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~~ 371 (379)
+++||++|.||++|.|..+ +.||++|.||.|+.|... |.++++++-
T Consensus 130 ~v~IGd~v~IG~~~~I~~g---------v~IG~~~vIgagsvV~~~-vp~~~vv~G 175 (185)
T 2p2o_A 130 PVVIGHNVWIGGRAVINPG---------VTIGDNAVIASGAVVTKD-VPANAVVGG 175 (185)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEEEE
T ss_pred CeEEcCCeEECCCCEECCC---------CEECCCCEECCCCEECCC-CCCCcEEEc
Confidence 6778888888888888766 888888888888888655 566666653
No 144
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.49 E-value=3.1e-07 Score=83.81 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=16.8
Q ss_pred eEECCCcEECCCcEEe-ccEECCCceeccccc
Q 016989 344 TILGEAVGVEDEVVVT-NSIVLPNKTLNVSVH 374 (379)
Q Consensus 344 sii~~~~~i~~~~~i~-~~ii~~~~~i~~~~~ 374 (379)
+.||.+|+|..+++|. +|+||++++|..+++
T Consensus 230 v~IGaga~Ilggv~IG~~a~IGagsvV~~dVp 261 (313)
T 3q1x_A 230 VTIGTGAKVLGNIIVGSHVRIGANCWIDRDVD 261 (313)
T ss_dssp CEECTTCEEESSCEECSSEEECTTCEECSCBC
T ss_pred CEECCCCEECCCcEECCCCEECCCCEECCCcC
Confidence 5555555555555553 555555555555554
No 145
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.49 E-value=3.7e-07 Score=78.40 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=42.4
Q ss_pred ecCeEECCCcEECCCCCCCcEEe---ceEECCCCEECCCcEEeeccc-c-------cc-cccceEECCCcEECCCcEEe-
Q 016989 293 IGDVYVHPSAKIHPTAKENAVVT---NAIVGWKSSIGRWSRVQAEGD-F-------NA-KLGITILGEAVGVEDEVVVT- 359 (379)
Q Consensus 293 ~~~~~i~~~~~i~~~~~~~~~i~---~s~ig~~~~ig~~~~i~~~~~-~-------~~-~~~~sii~~~~~i~~~~~i~- 359 (379)
+.++.||+++.|+++| .|. ...||++|.||++|.|....- . .. ...+++||++|.||.+|.|.
T Consensus 73 g~~i~IG~~~~I~~~~----~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~ 148 (203)
T 1krr_A 73 GSNIHIGRNFYANFNL----TIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINP 148 (203)
T ss_dssp STTEEECSSCEECSCE----EEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECT
T ss_pred CCCeEECCeeEECCcc----EEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeC
Confidence 3445555555555443 443 378888888888888764310 0 00 11235666666666666553
Q ss_pred ------ccEECCCceeccccc
Q 016989 360 ------NSIVLPNKTLNVSVH 374 (379)
Q Consensus 360 ------~~ii~~~~~i~~~~~ 374 (379)
+|+|+++++|..+++
T Consensus 149 gv~IG~~~vIgagsvV~~dvp 169 (203)
T 1krr_A 149 GVTIGDNSVIGAGSIVTKDIP 169 (203)
T ss_dssp TCEECTTCEECTTCEECSCBC
T ss_pred CeEECCCCEECCCCEECCCcC
Confidence 444555555544444
No 146
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.48 E-value=3.1e-07 Score=90.37 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=35.6
Q ss_pred EEeceEECCCCEECCCcEEeeccccccccc-ceEECCCcEECCCcEEe-------ccEECCCceeccccc
Q 016989 313 VVTNAIVGWKSSIGRWSRVQAEGDFNAKLG-ITILGEAVGVEDEVVVT-------NSIVLPNKTLNVSVH 374 (379)
Q Consensus 313 ~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~-~sii~~~~~i~~~~~i~-------~~ii~~~~~i~~~~~ 374 (379)
.+++|+||++|.||++|.+.+. .+..+ +|+||++|.||.+|.|. +|+|++++.|.++++
T Consensus 383 ~i~d~~Ig~~v~IG~g~i~~n~---dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~~dvp 449 (501)
T 3st8_A 383 YVGDADIGEYSNIGASSVFVNY---DGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVP 449 (501)
T ss_dssp EEESEEECSSCEECTTCEEECB---CSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBC
T ss_pred eecCceEcCCCEECCCEEEEcc---cCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEECcccC
Confidence 3445667777777777666441 12222 28888888888877662 555555555555555
No 147
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.44 E-value=5.5e-07 Score=80.38 Aligned_cols=42 Identities=21% Similarity=0.173 Sum_probs=29.3
Q ss_pred eEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCce
Q 016989 317 AIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKT 368 (379)
Q Consensus 317 s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~ 368 (379)
++||++|.||+++.|.++ ++||++|+||.|+.|... |.++++
T Consensus 190 ~~IGd~v~IGaga~Il~g---------v~IG~~a~IGagsvV~~d-Vp~~~~ 231 (267)
T 1ssq_A 190 PKVREGVMIGAGAKILGN---------IEVGKYAKIGANSVVLNP-VPEYAT 231 (267)
T ss_dssp CEECTTCEECTTCEEESS---------CEECTTCEECTTCEECSC-BCTTCE
T ss_pred eEECCCeEEcCCCEEeCC---------cEECCCCEECCCCEEccC-CCCCCE
Confidence 577777777777777766 777888888887777543 344443
No 148
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.41 E-value=1.3e-05 Score=77.40 Aligned_cols=180 Identities=17% Similarity=0.218 Sum_probs=110.9
Q ss_pred CCceEEEEEecCCCCCCccCCCCCCCCCCCceeC-CcchhHHHHHhcCc-----------EEEEcccchHHHHHHHHhhc
Q 016989 6 DDKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG-GQPMVHHPISACKR-----------IYLVGFYEEREFALYVSSIS 73 (379)
Q Consensus 6 ~~~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~-g~pli~~~i~~l~~-----------iiv~~~~~~~~i~~~l~~~~ 73 (379)
..++.+|+|||| .||||+- ..||.++|+. |++++++.++.+.. ++.+.....+...+|++++
T Consensus 125 l~kvavvlLaGG--lGTRLG~---~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~- 198 (528)
T 3r3i_A 125 LNKLVVVKLNGG--LGTSMGC---KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKY- 198 (528)
T ss_dssp CTTEEEEEECCC--BCTTTTC---SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGG-
T ss_pred cCceEEEEeCCC--CccccCC---CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhc-
Confidence 357899999999 9999977 7899999997 99999999998875 4455555556688888764
Q ss_pred ccCCccEEEecCC---------------------------CCCChHHHHHH-----HHHhhccCCCCeEEEEcCCeee-c
Q 016989 74 NELRIPVRYLRED---------------------------KPHGSAGALYN-----FRDLIMEDNPSHIFLLNCDVCC-S 120 (379)
Q Consensus 74 ~~~~~~i~~~~~~---------------------------~~~g~~~al~~-----~~~~i~~~~~~~~lv~~gD~i~-~ 120 (379)
..++.++.+..|. .+.|.++.... .++.+....-+++.+.+.|++. .
T Consensus 199 ~~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~ 278 (528)
T 3r3i_A 199 NHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGAT 278 (528)
T ss_dssp TTSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCC
T ss_pred CccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccc
Confidence 3455555443321 13344432222 2334433334689999999998 4
Q ss_pred CChHHHHHHHHhc----CCceEEEEEEeCCCCCCceeEEEEeCCCC--cEEEeeecCCC--------cccceeeeeEEEe
Q 016989 121 FPLPEMLDAHRNY----GGMGTILVIKVSAESASQFGELVADPDTN--ELLHYTEKPET--------FVSDLINCGVYVF 186 (379)
Q Consensus 121 ~dl~~~l~~~~~~----~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--~v~~~~ekp~~--------~~~~~~~~Giy~~ 186 (379)
.|. .++..+..+ ++++.+-+.+... ....-|.+... +| +++.+.+-|.. ..-.+.|+..++|
T Consensus 279 vDp-~~Lg~~~~~~~~~~~d~~~kVv~Kt~-~dek~Gvl~~~--dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~ 354 (528)
T 3r3i_A 279 VDL-YILNHLMNPPNGKRCEFVMEVTNKTR-ADVKGGTLTQY--EGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWI 354 (528)
T ss_dssp CCH-HHHHHHSSCSSSCCCSEEEEECCCCT-TCCSSCEEECS--SSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEE
T ss_pred cCH-HHHHHHHhcccccCCcEEEEEeEccc-cCCcccEEEEE--CCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEE
Confidence 333 355555555 6666554443221 12233555543 34 34444443321 2344678999999
Q ss_pred CHhhHHHhh
Q 016989 187 TPDIFNAIQ 195 (379)
Q Consensus 187 ~~~~l~~l~ 195 (379)
+-+.++.+.
T Consensus 355 ~L~~L~~v~ 363 (528)
T 3r3i_A 355 SLAAVKRLQ 363 (528)
T ss_dssp EHHHHHHHH
T ss_pred EHHHHHHHH
Confidence 977665443
No 149
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.36 E-value=1e-06 Score=79.29 Aligned_cols=26 Identities=8% Similarity=-0.013 Sum_probs=21.9
Q ss_pred CeEE--EEcCCeeecCChHHHHHHHHhc
Q 016989 108 SHIF--LLNCDVCCSFPLPEMLDAHRNY 133 (379)
Q Consensus 108 ~~~l--v~~gD~i~~~dl~~~l~~~~~~ 133 (379)
|++| ++++|.+...+|.+++..|...
T Consensus 40 EP~L~~~l~~~IL~~~~l~~aLa~~La~ 67 (289)
T 1t3d_A 40 EPMLASFYHATLLKHENLGSALSYMLAN 67 (289)
T ss_dssp CGGGHHHHHHHTTTCSSHHHHHHHHHHH
T ss_pred CCHHHHHhcccccCCCCHHHHHHHHHhc
Confidence 4688 8899999899999999988764
No 150
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.36 E-value=7.7e-07 Score=80.70 Aligned_cols=16 Identities=19% Similarity=0.017 Sum_probs=7.1
Q ss_pred cEEe-ceEECCCCEECC
Q 016989 312 AVVT-NAIVGWKSSIGR 327 (379)
Q Consensus 312 ~~i~-~s~ig~~~~ig~ 327 (379)
+.|+ ++.||++|.|+.
T Consensus 231 v~IGdnv~IgpGa~IgG 247 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMG 247 (347)
T ss_dssp CEECTTEEECTTCEECC
T ss_pred EEECCCCEECCCCEEcc
Confidence 3444 444444444443
No 151
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.36 E-value=4.1e-07 Score=87.39 Aligned_cols=72 Identities=17% Similarity=0.211 Sum_probs=55.4
Q ss_pred EecCeEECCCcEECCCCC-CCcEEeceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCceec
Q 016989 292 IIGDVYVHPSAKIHPTAK-ENAVVTNAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTLN 370 (379)
Q Consensus 292 i~~~~~i~~~~~i~~~~~-~~~~i~~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i~ 370 (379)
+.+.+.+++.+.++++.. .++.+.++.||++|.| .++.|.+ |+||++|+||++|.|.+|+|++++.|+
T Consensus 299 i~~~~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~----------~~ig~~~~I~~~~~i~~~~i~~~~~i~ 367 (420)
T 3brk_X 299 IWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNR----------SLLFTGVRANSYSRLENAVVLPSVKIG 367 (420)
T ss_dssp CCCCCCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEES----------CEECTTCEECTTCEEEEEEECTTCEEC
T ss_pred eeeccccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeC----------cEEcCCCEECCCCEEcceEEcCCCEEC
Confidence 334444555555543100 2456789999999999 8888865 999999999999999999999999999
Q ss_pred cccc
Q 016989 371 VSVH 374 (379)
Q Consensus 371 ~~~~ 374 (379)
+++.
T Consensus 368 ~~~~ 371 (420)
T 3brk_X 368 RHAQ 371 (420)
T ss_dssp TTCE
T ss_pred CCCE
Confidence 9875
No 152
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.36 E-value=6.2e-07 Score=79.95 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=24.0
Q ss_pred eEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEecc
Q 016989 317 AIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNS 361 (379)
Q Consensus 317 s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ 361 (379)
++||++|.||++|.|..+ +.||++|+||.++.|...
T Consensus 164 v~Igd~v~IG~~a~I~~g---------v~IG~~~~IgagsvV~~~ 199 (252)
T 3jqy_B 164 IIISSYVWVGRNVSIMKG---------VSVGSGSVIGYGSIVTKD 199 (252)
T ss_dssp EEECSSCEECSSEEECTT---------CEECTTCEECTTCEECSC
T ss_pred eEEecCcEECCCCEECCC---------CEECCCCEECCCCEECcc
Confidence 466777777777666666 667777777776666543
No 153
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.32 E-value=1.6e-06 Score=74.10 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=35.6
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|.++ +.||++|+||.|+.|...+ .+++++
T Consensus 132 ~v~IG~~v~IG~~~~I~~g---------v~IG~~~vIgagsvV~~dv-p~~~v~ 175 (195)
T 3nz2_A 132 PIVIEDDVWIGGNVVINQG---------VTIGARSVVAANSVVNQDV-PPDTLV 175 (195)
T ss_dssp CEEECTTCEECTTCEECTT---------CEECTTCEECTTCEECSCB-CSSEEE
T ss_pred CeEECCCCEEcCCCEECCC---------CEECCCCEECCCCEEcccc-CCCcEE
Confidence 6789999999999999887 9999999999999997664 344443
No 154
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.31 E-value=1.6e-06 Score=75.25 Aligned_cols=74 Identities=8% Similarity=0.128 Sum_probs=43.5
Q ss_pred eEECCCcEECCCCCCCcEE----eceEECCCCEECCCcEEeeccc---cc-------ccccceEECCCcEECCCcEEe-c
Q 016989 296 VYVHPSAKIHPTAKENAVV----TNAIVGWKSSIGRWSRVQAEGD---FN-------AKLGITILGEAVGVEDEVVVT-N 360 (379)
Q Consensus 296 ~~i~~~~~i~~~~~~~~~i----~~s~ig~~~~ig~~~~i~~~~~---~~-------~~~~~sii~~~~~i~~~~~i~-~ 360 (379)
+.||+++.|++. +.+ .+++||++|.||++|.|.+..- .. .....++||++|.||.+|.|. +
T Consensus 80 ~~IG~~~~Ig~~----~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~g 155 (215)
T 2wlg_A 80 LQIQAKTTMGNG----EITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKG 155 (215)
T ss_dssp EEECTTCEECSE----EEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTT
T ss_pred EEEcCCCEECCE----EEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCC
Confidence 555555555542 233 5788999999999999986310 00 001225777777777776663 5
Q ss_pred cEECCCceecccc
Q 016989 361 SIVLPNKTLNVSV 373 (379)
Q Consensus 361 ~ii~~~~~i~~~~ 373 (379)
+.||++++|+.++
T Consensus 156 v~Ig~~~vIgags 168 (215)
T 2wlg_A 156 VCIPNNVVVGSHT 168 (215)
T ss_dssp CEECSSCEECTTC
T ss_pred CEECCCCEECCCC
Confidence 5555555555543
No 155
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.30 E-value=1.5e-06 Score=78.14 Aligned_cols=11 Identities=36% Similarity=0.528 Sum_probs=3.9
Q ss_pred ECCCcEECCCc
Q 016989 346 LGEAVGVEDEV 356 (379)
Q Consensus 346 i~~~~~i~~~~ 356 (379)
||++|+||.|+
T Consensus 252 IGd~~iIGAGS 262 (332)
T 3fsy_A 252 LGDDCVVEAGL 262 (332)
T ss_dssp BCSSCEECTTC
T ss_pred ECCCCEECCCC
Confidence 33333333333
No 156
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.29 E-value=8e-07 Score=77.55 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=24.7
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEecc
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNS 361 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ 361 (379)
+++||++|.||.+|.|.++ +.||++|.||.++.|...
T Consensus 119 ~v~IG~~v~IG~~a~I~~g---------v~IG~gavIgagsvV~~d 155 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMPG---------VKIGDGAIIAAEAVVTKN 155 (220)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC
T ss_pred CeEECCCcEECCCCEEeCC---------CEECCCCEEcCCCEEccc
Confidence 5667777777777666666 666777777776666544
No 157
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.28 E-value=3.1e-06 Score=72.61 Aligned_cols=44 Identities=18% Similarity=0.281 Sum_probs=36.8
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|.++ +.||++|+||.|+.|... |.+++++
T Consensus 131 ~v~IGd~v~IG~~a~I~~g---------v~IG~~~vIgagsvV~~d-vp~~~vv 174 (203)
T 1krr_A 131 PITIGNNVWIGSHVVINPG---------VTIGDNSVIGAGSIVTKD-IPPNVVA 174 (203)
T ss_dssp CEEECTTCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CcEECCCeEECCCCEEeCC---------eEECCCCEECCCCEECCC-cCCCcEE
Confidence 6889999999999999888 999999999999999765 4666654
No 158
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.27 E-value=2.2e-06 Score=74.26 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=9.3
Q ss_pred ceEECCCCEECCCcEE
Q 016989 316 NAIVGWKSSIGRWSRV 331 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i 331 (379)
++.||++|.|+++|.|
T Consensus 58 ~v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 58 KLVIGSFCSIGSGAVF 73 (212)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CcEECCCCEECCCCEE
Confidence 5556666666666655
No 159
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.26 E-value=3.9e-06 Score=72.72 Aligned_cols=44 Identities=23% Similarity=0.363 Sum_probs=29.3
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|.++ +.||++|+||.++.|... |.+++++
T Consensus 111 ~v~IG~~v~IG~~a~I~~g---------v~IG~~~iIgagsvV~~d-Vp~~~vv 154 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPG---------VKIGHGAIIASRSVVTKD-VAPYEVV 154 (212)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CeEECCCCEECCCCEEcCC---------CEECCCCEECCCCEEccc-cCCCcEE
Confidence 5677777777777777766 777777777777777543 3455444
No 160
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.23 E-value=3.3e-06 Score=73.30 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=44.8
Q ss_pred eEECCCcEECCCCCCCcEEe----ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEecc----------
Q 016989 296 VYVHPSAKIHPTAKENAVVT----NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNS---------- 361 (379)
Q Consensus 296 ~~i~~~~~i~~~~~~~~~i~----~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~---------- 361 (379)
+.||+++.|++++ .+. ++.||++|.|++.+.+.. +-..++||++|.|+++|.|.++
T Consensus 59 v~IG~~~~I~~~~----~i~~~~~~~~IG~~~~Ig~~~ii~~------~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~ 128 (215)
T 2wlg_A 59 LFIADDVEIMGLV----CSLHSDCSLQIQAKTTMGNGEITIA------EKGKISIGKDCMLAHGYEIRNTDMHPIYSLEN 128 (215)
T ss_dssp EEECTTCEEESEE----EEECTTCEEEECTTCEECSEEEEEC------TTCEEEECTTCEECTTEEEESCCSSCEEETTT
T ss_pred EEECCCCEECCCe----EEEcCCceEEEcCCCEECCEEEEEe------CCCCEEECCCCEEcCCEEEECCCCcccccccc
Confidence 6777777777554 343 388888888888555421 0011788888888888888642
Q ss_pred ----------EECCCceeccccc
Q 016989 362 ----------IVLPNKTLNVSVH 374 (379)
Q Consensus 362 ----------ii~~~~~i~~~~~ 374 (379)
+||+++.||.++.
T Consensus 129 ~~~~~~~~~v~Igd~v~IG~~~~ 151 (215)
T 2wlg_A 129 GERINHGKDVIIGNHVWLGRNVT 151 (215)
T ss_dssp CBBCCCCCCEEECTTCEECTTCE
T ss_pred cccccCCCCeEECCCcEECCCCE
Confidence 6666666666553
No 161
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.17 E-value=4.7e-06 Score=80.71 Aligned_cols=28 Identities=21% Similarity=0.435 Sum_probs=17.7
Q ss_pred CEECCCcEEeecccccccccceEECCCcEECCCcEEec
Q 016989 323 SSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTN 360 (379)
Q Consensus 323 ~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~ 360 (379)
|.||++|.|++ ++||++|.||+||.|.+
T Consensus 389 ~~Ig~~~~i~~----------~~Ig~~~~IG~~~~i~~ 416 (451)
T 1yp2_A 389 IGIGKNCHIKR----------AIIDKNARIGDNVKIIN 416 (451)
T ss_dssp SEECTTCEEES----------EEECTTCEECTTCEECC
T ss_pred EEECCCCEEec----------cEeCCCcEECCCCEEeC
Confidence 66666666654 66666666666666643
No 162
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.14 E-value=5.8e-06 Score=71.76 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=37.2
Q ss_pred ceEECCCCEECCCcEEeec----ccc---------------------c-ccccceEECCCcEECCCcEEe-ccEECCCce
Q 016989 316 NAIVGWKSSIGRWSRVQAE----GDF---------------------N-AKLGITILGEAVGVEDEVVVT-NSIVLPNKT 368 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~----~~~---------------------~-~~~~~sii~~~~~i~~~~~i~-~~ii~~~~~ 368 (379)
+++||++|.|+++|.|..+ .+. . .....++||++|.||.+|.|. ++.||++++
T Consensus 65 ~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~Igd~v~IG~~a~I~~gv~IG~~~~ 144 (219)
T 4e8l_A 65 KLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAI 144 (219)
T ss_dssp CEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCCCTTTSCCCCCEEECSSCEECTTCEECTTCEECTTCE
T ss_pred CEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCcccccccccccccccCCcEECCCeEECCCCEEcCCCEECCCCE
Confidence 6788888888888888421 000 0 112347788888888888774 566666666
Q ss_pred ecccc
Q 016989 369 LNVSV 373 (379)
Q Consensus 369 i~~~~ 373 (379)
|+.++
T Consensus 145 Igags 149 (219)
T 4e8l_A 145 IAAEA 149 (219)
T ss_dssp ECTTC
T ss_pred ECCCC
Confidence 66553
No 163
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.02 E-value=7.4e-06 Score=70.66 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=13.0
Q ss_pred eEECCCcEECCCcEEe-ccEECCCceecc
Q 016989 344 TILGEAVGVEDEVVVT-NSIVLPNKTLNV 371 (379)
Q Consensus 344 sii~~~~~i~~~~~i~-~~ii~~~~~i~~ 371 (379)
++||++|.||.+|.|. ++.||++++|+.
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Iga 142 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAA 142 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECT
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcC
Confidence 4455555555555442 344444444433
No 164
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.02 E-value=8.2e-06 Score=76.06 Aligned_cols=17 Identities=12% Similarity=-0.015 Sum_probs=9.3
Q ss_pred cccchhhcCC--ccchhhc
Q 016989 249 TMDFWEQIKT--PGMSLKC 265 (379)
Q Consensus 249 ~~~~w~~i~t--~~d~~~a 265 (379)
...+|.+.++ |.++...
T Consensus 168 ~~~~Wt~~G~~~~~~f~~~ 186 (387)
T 2rij_A 168 SNVAWSDDKPIELEYLRAN 186 (387)
T ss_dssp CCEEEETTEEECHHHHHHH
T ss_pred ceeeeccCcccCHHHHHHH
Confidence 3456777766 4444433
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.00 E-value=2.8e-05 Score=67.10 Aligned_cols=17 Identities=24% Similarity=0.297 Sum_probs=9.4
Q ss_pred eceEECCCCEECCCcEE
Q 016989 315 TNAIVGWKSSIGRWSRV 331 (379)
Q Consensus 315 ~~s~ig~~~~ig~~~~i 331 (379)
....||++|.|+++|.|
T Consensus 55 ~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred cCEEEcCCCEECCCCEE
Confidence 34555555555555554
No 166
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=97.93 E-value=0.00017 Score=68.98 Aligned_cols=181 Identities=16% Similarity=0.124 Sum_probs=109.6
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCcee-CCcchhHHHHHhcCc-----------EEEEcccchHHHHHHHHhhccc
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPL-GGQPMVHHPISACKR-----------IYLVGFYEEREFALYVSSISNE 75 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi-~g~pli~~~i~~l~~-----------iiv~~~~~~~~i~~~l~~~~~~ 75 (379)
++.+|.|||| .||||+- ..||.++|+ .|+++++..++++.. ++.+.....+...+|++++ +.
T Consensus 76 kvavvlLaGG--lGTRLG~---~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~-~~ 149 (484)
T 3gue_A 76 QAVVLKLNGG--LGTGMGL---NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKY-PT 149 (484)
T ss_dssp TEEEEEEECC--CCGGGTC---SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGC-HH
T ss_pred hcEEEEEcCC--cccccCC---CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhC-cc
Confidence 6789999999 9999977 789999999 799999999998875 4445555555688888764 22
Q ss_pred CCc---cEEEecC-----------------------CCCCChHHHHHH-----HHHhhccCCCCeEEEEcCCeeecCChH
Q 016989 76 LRI---PVRYLRE-----------------------DKPHGSAGALYN-----FRDLIMEDNPSHIFLLNCDVCCSFPLP 124 (379)
Q Consensus 76 ~~~---~i~~~~~-----------------------~~~~g~~~al~~-----~~~~i~~~~~~~~lv~~gD~i~~~dl~ 124 (379)
+|+ .+.+..| ..+.|.++-... .++.+....-+++.+.+.|++...-=.
T Consensus 150 Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp 229 (484)
T 3gue_A 150 LYEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDV 229 (484)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCH
T ss_pred cCCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCH
Confidence 332 1211111 013465543332 133343333468999999995532225
Q ss_pred HHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEe--------CCCCc--EEEeeecCCC--------cccceeeeeEEEe
Q 016989 125 EMLDAHRNYGGMGTILVIKVSAESASQFGELVAD--------PDTNE--LLHYTEKPET--------FVSDLINCGVYVF 186 (379)
Q Consensus 125 ~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d--------~~~~~--v~~~~ekp~~--------~~~~~~~~Giy~~ 186 (379)
.++-.+.++++++.+-+.+.... ...-|.+... ..+|+ +..+.+-|.. ....+.+++..++
T Consensus 230 ~~lG~~~~~~~d~~~kvv~Kt~~-dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f~~~~g~~~FNtnNi~~ 308 (484)
T 3gue_A 230 RLLDYMHEKQLGFLMEVCRRTES-DKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNIWI 308 (484)
T ss_dssp HHHHHHHHTTCSEEEEEEECCTT-CCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHHTCTTTSCEEEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEEEECCCC-CCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhhcCCCCceEeEeeeEEE
Confidence 56777788888887766664321 2233544432 11444 4444443321 1234568888888
Q ss_pred CHhhH-HHhh
Q 016989 187 TPDIF-NAIQ 195 (379)
Q Consensus 187 ~~~~l-~~l~ 195 (379)
+-..+ +.+.
T Consensus 309 ~l~~l~~~l~ 318 (484)
T 3gue_A 309 NLMELKKMMD 318 (484)
T ss_dssp EHHHHHHHHH
T ss_pred EHHHHHHHHH
Confidence 86555 4443
No 167
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.75 E-value=4.9e-05 Score=65.45 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=31.1
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|.++ +.||++|.|+.++.|... +.+++.+
T Consensus 113 ~v~Ig~~v~IG~~a~I~~g---------v~Ig~~~~Igags~V~~~-v~~~~i~ 156 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMPG---------VKIGDGAIVAANSVVVKD-IAPYMLA 156 (209)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CcEECCCCEEcCCCEEcCC---------CEECCCCEEcCCCEEcCC-CCCCeEE
Confidence 5777777777777777776 777777777777777654 3555544
No 168
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=97.73 E-value=0.00015 Score=62.88 Aligned_cols=44 Identities=25% Similarity=0.341 Sum_probs=32.1
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|.++ +.||++|.|+.++.|... |.+++++
T Consensus 118 ~v~Igd~v~IG~~a~I~~g---------v~IG~~~~IgagsvV~~d-v~~~~~~ 161 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPG---------VKIGDGAIIAAEAVVTKN-VAPYSIV 161 (219)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CcEECCCeEECCCCEEcCC---------CEECCCCEECCCCEEccc-CCCCeEE
Confidence 6778888888888888777 788888888888877644 3555544
No 169
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.72 E-value=0.0001 Score=63.59 Aligned_cols=44 Identities=18% Similarity=0.286 Sum_probs=31.9
Q ss_pred ceEECCCCEECCCcEEeecccccccccceEECCCcEECCCcEEeccEECCCcee
Q 016989 316 NAIVGWKSSIGRWSRVQAEGDFNAKLGITILGEAVGVEDEVVVTNSIVLPNKTL 369 (379)
Q Consensus 316 ~s~ig~~~~ig~~~~i~~~~~~~~~~~~sii~~~~~i~~~~~i~~~ii~~~~~i 369 (379)
+++||++|.||.+|.|.++ +.||++|.||.++.|... |.+++.+
T Consensus 110 ~v~IG~~v~IG~~a~I~~g---------v~Ig~~~~IgagsvV~~~-vp~~~~~ 153 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPG---------VRVGHGAIIGSRALVTGD-VEPYAIV 153 (212)
T ss_dssp CEEECTTCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CeEECCCCEECCCCEEeCC---------CEECCCCEECCCCEEccc-CCCCcEE
Confidence 5778888888888777776 788888888888877654 4555544
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.41 E-value=0.00077 Score=66.28 Aligned_cols=181 Identities=15% Similarity=0.169 Sum_probs=108.4
Q ss_pred ceEEEEEecCCCCCCccCCCCCCCCCCCceeC---CcchhHHHHHhcCc--------EEEEcccchHHHHHHHHhhcccC
Q 016989 8 KVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLG---GQPMVHHPISACKR--------IYLVGFYEEREFALYVSSISNEL 76 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~lt~~~pK~llpi~---g~pli~~~i~~l~~--------iiv~~~~~~~~i~~~l~~~~~~~ 76 (379)
++.+|+|||| .||||+- ..||.++|++ |++++++.++++.+ ++.+.....+...+|+..+.-.
T Consensus 114 kvavvllaGG--lGTRLG~---~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fgl~- 187 (630)
T 3ogz_A 114 KTVFVLVAGG--LGERLGY---SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQLE- 187 (630)
T ss_dssp GEEEEEECCC--EEGGGTE---EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTTCC-
T ss_pred hceEEEecCC--cccccCC---CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhCCC-
Confidence 6789999999 9999987 7899999997 99999999999876 4455555556688888762110
Q ss_pred CccEEEecCC----------------------CCCChHHHHHH-----------------------HHHhhccCCCCeEE
Q 016989 77 RIPVRYLRED----------------------KPHGSAGALYN-----------------------FRDLIMEDNPSHIF 111 (379)
Q Consensus 77 ~~~i~~~~~~----------------------~~~g~~~al~~-----------------------~~~~i~~~~~~~~l 111 (379)
..++.+..|. .+.|.++.... .++.+....-+++.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 0123322111 13455543332 23333333346899
Q ss_pred EEcCCeee-cCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEE-eCCCCcE-----EEeee---------cCCC--
Q 016989 112 LLNCDVCC-SFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVA-DPDTNEL-----LHYTE---------KPET-- 173 (379)
Q Consensus 112 v~~gD~i~-~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~-d~~~~~v-----~~~~e---------kp~~-- 173 (379)
+.+.|+++ ...-..++-.+.++++++.+-+.+.. ....-|.+.. ...+|+. +.|.+ +|+.
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~--p~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~ 345 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRV--PKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDE 345 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCC--SSCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECC--CCcceeeEEEEecCCCceeeeeEEEeccCCHhHhhccCCCccc
Confidence 99999976 33333466777888888776665532 3345565554 1124554 22211 0110
Q ss_pred ------cccceeeeeEEEeCHh-hHHHhhc
Q 016989 174 ------FVSDLINCGVYVFTPD-IFNAIQG 196 (379)
Q Consensus 174 ------~~~~~~~~Giy~~~~~-~l~~l~~ 196 (379)
......|+..++|+-+ +.+.+.+
T Consensus 346 ~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 346 VSDPTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp -----CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred cccccccccccccceeeeEEHHHHHHHHHh
Confidence 1111348999999965 5556653
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.06 E-value=0.0004 Score=59.79 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=68.0
Q ss_pred ceEEEEEe--cCCCCCCccCCCCCCCCCCCceeCCcchhHHHHHhcCc-----E-EEEcccchHHHHHHHHhhcccCCcc
Q 016989 8 KVVAVIMV--GGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKR-----I-YLVGFYEEREFALYVSSISNELRIP 79 (379)
Q Consensus 8 ~~~aVIla--~G~~~gtRl~~lt~~~pK~llpi~g~pli~~~i~~l~~-----i-iv~~~~~~~~i~~~l~~~~~~~~~~ 79 (379)
.|.+||++ |. .-|||.+ .+.+......++||++|+++.+.. + ++++..... . ..+++.
T Consensus 3 ~~~~vip~k~g~--~KtRL~~---~l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~~--~-------~~~~~~ 68 (211)
T 2i5e_A 3 AMRAVIPYKKAG--AKSRLSP---VLSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYGL--E-------EMTEAR 68 (211)
T ss_dssp CCEEEEECCCTT--TTGGGTT---TSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTC--S-------SCCSSE
T ss_pred ceEEEEEeCCCC--CccccCc---cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHHH--H-------hhcCCE
Confidence 47899999 77 8888876 333333446689999999999865 6 666654321 1 113443
Q ss_pred EEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee--cCChHHHHH
Q 016989 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC--SFPLPEMLD 128 (379)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~--~~dl~~~l~ 128 (379)
+ +.+. .|.++++..+.+.+. +.++++.||+|+ ...+..+++
T Consensus 69 ~--v~~~--~gl~~sl~~a~~~~~----~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 69 V--LLDE--KDLNEALNRYLKEAE----EPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp E--EECC--SCHHHHHHHHHHHCC----SCEEEECSCCTTCCHHHHHHHTT
T ss_pred E--EECC--CCHHHHHHHHHHhcC----CCEEEEcCCcCCCCHHHHHHHHc
Confidence 3 4334 788999999887662 369999999998 445676665
No 172
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=88.86 E-value=3.4 Score=35.34 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=56.3
Q ss_pred chhHHHHHhcCc-------EEEEcccchHHHHHHHHhhcccCCccEEEecCC--------CCCChHHHHHHHHHhhccCC
Q 016989 42 PMVHHPISACKR-------IYLVGFYEEREFALYVSSISNELRIPVRYLRED--------KPHGSAGALYNFRDLIMEDN 106 (379)
Q Consensus 42 pli~~~i~~l~~-------iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~~~~--------~~~g~~~al~~~~~~i~~~~ 106 (379)
..|..+|+.+.. |+|+-....+...+.+..... ...+.++..+ ...|.+.+.-.+++..+.
T Consensus 14 ~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~--~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g-- 89 (255)
T 1qg8_A 14 DYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN--DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEG-- 89 (255)
T ss_dssp TTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG--STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCC--
T ss_pred HHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh--cCCEEEEecccccccccccccCHHHHHHHHHHHcCC--
Confidence 556666666643 555544333334555554422 3456666555 566888888888877654
Q ss_pred CCeEEEEcCCeeecCC-hHHHHHHHHhc
Q 016989 107 PSHIFLLNCDVCCSFP-LPEMLDAHRNY 133 (379)
Q Consensus 107 ~~~~lv~~gD~i~~~d-l~~~l~~~~~~ 133 (379)
++++++.+|..+..+ +..+++.+.+.
T Consensus 90 -~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 90 -EYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp -SEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred -CEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 589999999999554 78888877665
No 173
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=87.81 E-value=4.3 Score=34.24 Aligned_cols=55 Identities=13% Similarity=0.107 Sum_probs=40.1
Q ss_pred EEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-hHHHHHHHHhcCCceE
Q 016989 80 VRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMGT 138 (379)
Q Consensus 80 i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-l~~~l~~~~~~~~~~t 138 (379)
+.++.. ...|.+.+.-.+++..+. ++++++.+|..+..+ |..+++...+.+.++.
T Consensus 62 i~~i~~-~n~G~~~a~N~g~~~a~g---~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v 117 (240)
T 3bcv_A 62 IKVIHK-KNAGLGMACNSGLDVATG---EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAV 117 (240)
T ss_dssp EEEEEC-CCCCHHHHHHHHHHHCCS---SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEE
T ss_pred EEEEEC-CCCChHHHHHHHHHHcCC---CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEE
Confidence 444443 467888888888887654 589999999998554 7888887766555553
No 174
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=86.62 E-value=4.9 Score=38.28 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=61.1
Q ss_pred ceeCCc--chhHHHHHhcCc---------EEEEcccchH-HHHHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhc
Q 016989 36 FPLGGQ--PMVHHPISACKR---------IYLVGFYEER-EFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIM 103 (379)
Q Consensus 36 lpi~g~--pli~~~i~~l~~---------iiv~~~~~~~-~i~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~ 103 (379)
+|.-|+ ..|...|+.+.+ |+|+-....+ ...+.+..+...++..+.++..+...|-+.+...+++...
T Consensus 35 Ip~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~ 114 (472)
T 1xhb_A 35 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSR 114 (472)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCC
T ss_pred EEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhcc
Confidence 444455 366666666543 5555332211 1233333322233335666666666788888888888765
Q ss_pred cCCCCeEEEEcCCeee-cCChHHHHHHHHhcCCce
Q 016989 104 EDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGMG 137 (379)
Q Consensus 104 ~~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~~~ 137 (379)
. +.++++++|..+ +.-|..+++...+.+..+
T Consensus 115 g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 115 G---QVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp S---SEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred C---CeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 4 589999999998 455899999877655433
No 175
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=78.22 E-value=6.2 Score=34.07 Aligned_cols=82 Identities=7% Similarity=0.012 Sum_probs=52.9
Q ss_pred chhHHHHHhcCc-----EEEEcccchHHH---HHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEE
Q 016989 42 PMVHHPISACKR-----IYLVGFYEEREF---ALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLL 113 (379)
Q Consensus 42 pli~~~i~~l~~-----iiv~~~~~~~~i---~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~ 113 (379)
+|+.++++.+.. ++++.......+ ..++ +..+.+..+ ...|.+.++..+...+-....+.++++
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-------~~~~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vlii 109 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-------GPQHMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVLM 109 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-------CTTSEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-------cCCcEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 999999999976 445544322222 3332 122344444 456889999998877622223569999
Q ss_pred cCCeee--cCChHHHHHHHH
Q 016989 114 NCDVCC--SFPLPEMLDAHR 131 (379)
Q Consensus 114 ~gD~i~--~~dl~~~l~~~~ 131 (379)
.+|.+. ..++..+++...
T Consensus 110 gaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 110 GSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp CSSCTTCCHHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHHhc
Confidence 999999 566888877544
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=78.01 E-value=14 Score=36.27 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=59.6
Q ss_pred ceeCCcc--hhHHHHHhcCc---------EEEEccc-chHHHHHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhc
Q 016989 36 FPLGGQP--MVHHPISACKR---------IYLVGFY-EEREFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIM 103 (379)
Q Consensus 36 lpi~g~p--li~~~i~~l~~---------iiv~~~~-~~~~i~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~ 103 (379)
+|.-|++ .|...|+.+.. |+|+-.. .+..+.+.+..+...+ ..+.++..+...|-+.+...+++...
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~-~~v~vi~~~~n~G~~~A~N~G~~~A~ 196 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF-PSVRILRTKKREGLIRTRMLGASVAT 196 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS-TTEEEEECSSCCCHHHHHHHHHHHCC
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC-CeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 4455654 66666666542 5555332 1222233333322222 24666666666799999888888765
Q ss_pred cCCCCeEEEEcCCeee-cCChHHHHHHHHhcCC
Q 016989 104 EDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGG 135 (379)
Q Consensus 104 ~~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~ 135 (379)
. +.++++++|..+ +.-|..+++...+...
T Consensus 197 g---d~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 197 G---DVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp S---SEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred C---CEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 4 589999999999 4558999988766543
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=61.44 E-value=35 Score=33.56 Aligned_cols=97 Identities=8% Similarity=0.077 Sum_probs=56.9
Q ss_pred ceeCCc-chhHHHHHhcCc--------EEEEcccchHHHHHHHHhhcccCCccEEEecCC-CCCChHHHHHHHHHhhccC
Q 016989 36 FPLGGQ-PMVHHPISACKR--------IYLVGFYEEREFALYVSSISNELRIPVRYLRED-KPHGSAGALYNFRDLIMED 105 (379)
Q Consensus 36 lpi~g~-pli~~~i~~l~~--------iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~~~~-~~~g~~~al~~~~~~i~~~ 105 (379)
+|.-|+ ..|..+|+.+.. |+|+-....+...+.+....... .+.++... ...|-+.++-.+++....
T Consensus 99 Ip~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~--~i~~i~~~~~~~g~~~a~N~g~~~a~g- 175 (625)
T 2z86_A 99 IPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLL--NIKYVRQKDYGYQLCAVRNLGLRAAKY- 175 (625)
T ss_dssp EEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTS--CEEEEEECCCSCCHHHHHHHHHHHCCS-
T ss_pred EecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcC--CeEEEEeCCCCcchhHHHHHHHHhCCc-
Confidence 444454 466666666642 55553332223445555433322 33333322 234677888888777654
Q ss_pred CCCeEEEEcCCeeecCC-hHHHHHHHHhcCCce
Q 016989 106 NPSHIFLLNCDVCCSFP-LPEMLDAHRNYGGMG 137 (379)
Q Consensus 106 ~~~~~lv~~gD~i~~~d-l~~~l~~~~~~~~~~ 137 (379)
+.++++.+|.....+ +..+++.+.+.+..+
T Consensus 176 --~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~ 206 (625)
T 2z86_A 176 --NYVAILDCDMAPNPLWVQSYMELLAVDDNVA 206 (625)
T ss_dssp --SEEEEECTTEEECTTHHHHHHHHHHHCTTEE
T ss_pred --CEEEEECCCCCCCHHHHHHHHHHHhcCCceE
Confidence 589999999999555 788888776655433
No 178
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=60.51 E-value=16 Score=32.80 Aligned_cols=53 Identities=11% Similarity=0.035 Sum_probs=35.9
Q ss_pred CCCCChHHHHHHHHHhhccCCCCeEEEEcCCee-ec-CChHHHHHHHHhc-CCceEEEE
Q 016989 86 DKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVC-CS-FPLPEMLDAHRNY-GGMGTILV 141 (379)
Q Consensus 86 ~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i-~~-~dl~~~l~~~~~~-~~~~ti~~ 141 (379)
....|-+.++..+++.... ++++++.+|.. +. ..+..+++...+. +.+++...
T Consensus 114 ~~n~G~~~a~n~g~~~a~g---d~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 114 PIRPGKGEALWRSLAASRG---DIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSF 169 (329)
T ss_dssp CCCCSHHHHHHHHHHHCCC---SEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEE
T ss_pred CCCCCHHHHHHHHHHhCCC---CEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEE
Confidence 3456777777777776544 58999999998 74 4588888875443 44444443
No 179
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=56.85 E-value=61 Score=30.80 Aligned_cols=93 Identities=17% Similarity=0.196 Sum_probs=58.0
Q ss_pred ceeCCcc--hhHHHHHhcCc---------EEEEccc-chHHHHHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhc
Q 016989 36 FPLGGQP--MVHHPISACKR---------IYLVGFY-EEREFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIM 103 (379)
Q Consensus 36 lpi~g~p--li~~~i~~l~~---------iiv~~~~-~~~~i~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~ 103 (379)
+|.-|++ .|...|+.+.. |+|+-.. .+..+...+.. . ..+.++..+...|-+.+...+++...
T Consensus 72 Ip~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~---~--~~v~vi~~~~n~G~~~A~N~G~~~A~ 146 (501)
T 2ffu_A 72 ITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK---I--EKVRVLRNDRREGLMRSRVRGADAAQ 146 (501)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG---B--TTEEEEECSSCCHHHHHHHHHHHHCC
T ss_pred EEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc---C--CCEEEEECCCCcCHHHHHHHHHHhcC
Confidence 4555653 66666666542 4554322 22223333321 1 24556655566788888888888765
Q ss_pred cCCCCeEEEEcCCeee-cCChHHHHHHHHhcCCc
Q 016989 104 EDNPSHIFLLNCDVCC-SFPLPEMLDAHRNYGGM 136 (379)
Q Consensus 104 ~~~~~~~lv~~gD~i~-~~dl~~~l~~~~~~~~~ 136 (379)
. +.++++.+|... +.-|..+++...+.+..
T Consensus 147 g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 147 A---KVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp S---SEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred C---CEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 4 589999999999 55589999987775553
No 180
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=50.92 E-value=60 Score=31.81 Aligned_cols=90 Identities=13% Similarity=0.018 Sum_probs=53.5
Q ss_pred CcchhHHHHHhcCc-------EEEEcccchHHHHHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEE
Q 016989 40 GQPMVHHPISACKR-------IYLVGFYEEREFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFL 112 (379)
Q Consensus 40 g~pli~~~i~~l~~-------iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv 112 (379)
....|..+|+.+.. |+|+-....+...+.+....... ..+.++. ....|-+.++-.+++.... +++++
T Consensus 386 ~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~-~~i~~~~-~~n~G~~~a~n~g~~~a~g---~~i~~ 460 (625)
T 2z86_A 386 CSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANH-PRVRFIS-QKNKGIGSASNTAVRLCRG---FYIGQ 460 (625)
T ss_dssp CTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTC-TTEEEEE-ECCCCHHHHHHHHHHHCCS---SEEEE
T ss_pred CHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhC-CcEEEEe-CCCCCHHHHHHHHHHhcCC---CEEEE
Confidence 34677777777753 55553322221233333321111 2344443 3456888888888877654 58999
Q ss_pred EcCCeeecCC-hHHHHHHHHhcC
Q 016989 113 LNCDVCCSFP-LPEMLDAHRNYG 134 (379)
Q Consensus 113 ~~gD~i~~~d-l~~~l~~~~~~~ 134 (379)
+.+|..+..+ |..+++.+.+.+
T Consensus 461 ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 461 LDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp CCTTCEECTTHHHHHHHHHHHCT
T ss_pred ECCCcccChhHHHHHHHHHHhCC
Confidence 9999998544 788888765543
No 181
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=44.43 E-value=87 Score=31.99 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-hHHHHHHHHhcC
Q 016989 87 KPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEMLDAHRNYG 134 (379)
Q Consensus 87 ~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-l~~~l~~~~~~~ 134 (379)
...|-++++..+.+..+. |.++++++|...+.+ +..++..+.+.+
T Consensus 222 ~~~GKa~alN~gl~~a~g---d~Il~lDaD~~~~pd~L~~lv~~~~~dp 267 (802)
T 4hg6_A 222 NEHAKAGNMSAALERLKG---ELVVVFDADHVPSRDFLARTVGYFVEDP 267 (802)
T ss_dssp CCSHHHHHHHHHHHHCCC---SEEEECCTTEEECTTHHHHHHHHHHHSS
T ss_pred CCCcchHHHHHHHHhcCC---CEEEEECCCCCcChHHHHHHHHHHhcCC
Confidence 345778888888877654 589999999999555 788888775543
No 182
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=42.12 E-value=24 Score=32.72 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=54.6
Q ss_pred CCChHHHHHHHHHhhccCCCCeEEEEcCCee-e-cCChHHHHHHHHhc-CCceEEEEEEeCCCCCCceeEEEEeCCCCcE
Q 016989 88 PHGSAGALYNFRDLIMEDNPSHIFLLNCDVC-C-SFPLPEMLDAHRNY-GGMGTILVIKVSAESASQFGELVADPDTNEL 164 (379)
Q Consensus 88 ~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i-~-~~dl~~~l~~~~~~-~~~~ti~~~~~~~~~~~~~g~v~~d~~~~~v 164 (379)
..|-+.++..+.+... .+.++++.+|.. . +..+..+++...+. +.+++............. .... ..+++
T Consensus 164 n~G~g~A~n~G~~~A~---gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~---~~~~-~~g~v 236 (387)
T 3f1y_A 164 AHGKGDAMWRALSVTR---GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGES---IEED-GGGRV 236 (387)
T ss_dssp CCSHHHHHHHHTTTCC---SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC----------CCB-CCSHH
T ss_pred cCCHHHHHHHHHHhcC---CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccc---cccc-cCCch
Confidence 4566666666665543 358999999998 6 55688888877654 566666554322110000 0001 12333
Q ss_pred EEeeec-------CCCcccceeeeeEEEeCHhhHHHh
Q 016989 165 LHYTEK-------PETFVSDLINCGVYVFTPDIFNAI 194 (379)
Q Consensus 165 ~~~~ek-------p~~~~~~~~~~Giy~~~~~~l~~l 194 (379)
..+..+ +.........+|.++|++++++.+
T Consensus 237 ~~~~~~~l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i 273 (387)
T 3f1y_A 237 TELTAKPLFNLFYPELAGFVQPLAGEFVADRELFCSI 273 (387)
T ss_dssp HHHTHHHHHHHHCGGGTTCSCTTCSCEEEEHHHHTTS
T ss_pred hhhhHHHHHHHHhHhhccccccccccEEEEHHHHHhC
Confidence 322111 100011223478999999999887
No 183
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=41.07 E-value=1e+02 Score=30.69 Aligned_cols=97 Identities=9% Similarity=0.085 Sum_probs=59.4
Q ss_pred CCcchhHHHHHhcCc----------EEEEcccch-----HHHHHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhc
Q 016989 39 GGQPMVHHPISACKR----------IYLVGFYEE-----REFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIM 103 (379)
Q Consensus 39 ~g~pli~~~i~~l~~----------iiv~~~~~~-----~~i~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~ 103 (379)
++...|...|+.+.+ |+|+-+... ..+.+.+... +..+.++.++ ..|-+.+.-.+++...
T Consensus 190 N~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~----~~~I~vI~~~-N~G~a~a~N~Gl~~A~ 264 (657)
T 4fix_A 190 NRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL----GSRLSIHDQP-NLGGSGGYSRVMYEAL 264 (657)
T ss_dssp SCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH----GGGEEEEECC-CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc----CCCEEEEECC-CCCHHHHHHHHHHHHH
Confidence 344677777777643 455432211 1244444332 2356666655 6788888777777664
Q ss_pred cC-CCCeEEEEcCCeeecC-ChHHHHHHHHhcCCceEEE
Q 016989 104 ED-NPSHIFLLNCDVCCSF-PLPEMLDAHRNYGGMGTIL 140 (379)
Q Consensus 104 ~~-~~~~~lv~~gD~i~~~-dl~~~l~~~~~~~~~~ti~ 140 (379)
.. ..|++++++.|..... -|..+++.+...+....+.
T Consensus 265 g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg 303 (657)
T 4fix_A 265 KNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVG 303 (657)
T ss_dssp HHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEE
T ss_pred hcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEE
Confidence 32 3468999999999954 4888888877654443333
No 184
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=40.44 E-value=1.1e+02 Score=25.68 Aligned_cols=75 Identities=5% Similarity=-0.036 Sum_probs=44.2
Q ss_pred EEEEcccchHHHHHHHHhh----cccCCccEEEecCCC--CCChHHHHHHHHHhhccCCCCeEEEEcCCeeecCC-hHHH
Q 016989 54 IYLVGFYEEREFALYVSSI----SNELRIPVRYLREDK--PHGSAGALYNFRDLIMEDNPSHIFLLNCDVCCSFP-LPEM 126 (379)
Q Consensus 54 iiv~~~~~~~~i~~~l~~~----~~~~~~~i~~~~~~~--~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~~~d-l~~~ 126 (379)
|+++ +...+.+.+.+... ...-..++..+.... ..|.+.+.-.+++.... +++++++.|..++.+ ++.+
T Consensus 20 II~~-yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~~g~a~a~N~Gi~~A~g---~yl~fln~D~~~~~~~l~~l 95 (249)
T 2nxv_A 20 VCSL-VRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQFHGFSWHKQMLPRCKG---RYVIFCHEDVELVDRGYDDL 95 (249)
T ss_dssp EEEE-ESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCSCCTTTHHHHHGGGCCS---SEEEEEETTEECSSCCHHHH
T ss_pred EEEe-eCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCcccHHHHHHHHHHhcCC---CEEEEECCCcccCccHHHHH
Confidence 4433 44455577777622 111124555554322 14556666666665543 689999999999555 7888
Q ss_pred HHHHHh
Q 016989 127 LDAHRN 132 (379)
Q Consensus 127 l~~~~~ 132 (379)
++...+
T Consensus 96 ~~~~~~ 101 (249)
T 2nxv_A 96 VAAIEA 101 (249)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876654
No 185
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=38.35 E-value=96 Score=25.66 Aligned_cols=86 Identities=9% Similarity=0.023 Sum_probs=49.0
Q ss_pred HhhccCCCCeEEEEcCCe-eecCChHHHHHHHHhcCCceEEEEEEeCCCCCCceeEEEEeCCCCcEEEeeecCCCcccce
Q 016989 100 DLIMEDNPSHIFLLNCDV-CCSFPLPEMLDAHRNYGGMGTILVIKVSAESASQFGELVADPDTNELLHYTEKPETFVSDL 178 (379)
Q Consensus 100 ~~i~~~~~~~~lv~~gD~-i~~~dl~~~l~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~~v~~~~ekp~~~~~~~ 178 (379)
.++++...++++.+.+|. +...+.+++.+.. +.++|++...++.+... .+. ... + .+..+-....-..
T Consensus 47 ~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl-~~g~DVV~GsYp~K~~~--~~s--~~a--~----~y~~~i~~~~V~d 115 (203)
T 2c0n_A 47 MFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF-NEGYDVVCGYYYLKTLR--GYS--VYR--K----DWEKEIFDGEVNG 115 (203)
T ss_dssp HHHHCTTCCEEEEECTTEEEEECCHHHHHHHH-HHTCSEEEEECBCTTSS--SBS--EES--S----SBCSSCCCEECSE
T ss_pred HHHhcCCCCEEEEEeCCCCccccCHHHHHHHH-hCCCCEEEEEeeccCCC--ccc--hHH--H----HHHHhccCceeee
Confidence 455544457899999993 2344444444433 44888988888764211 111 111 1 1111101113446
Q ss_pred eeeeEEEeCHhhHHHhhc
Q 016989 179 INCGVYVFTPDIFNAIQG 196 (379)
Q Consensus 179 ~~~Giy~~~~~~l~~l~~ 196 (379)
.-+|..++++++|+.+..
T Consensus 116 ~~tGF~lIkR~V~e~L~~ 133 (203)
T 2c0n_A 116 CGLGFTFIKREFLEKIKR 133 (203)
T ss_dssp ECSSEEEEEHHHHTTSCS
T ss_pred ccccEEEEhHHHHHHHhh
Confidence 779999999999988753
No 186
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=37.12 E-value=7.1 Score=39.57 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=0.0
Q ss_pred EEEEcccchHHHHHHHHhhcccCCccEEEecCCCCCChHHHHHHHHHhhccCCCCeEEEEcCCeee-cCChHHHHHHHH
Q 016989 54 IYLVGFYEEREFALYVSSISNELRIPVRYLREDKPHGSAGALYNFRDLIMEDNPSHIFLLNCDVCC-SFPLPEMLDAHR 131 (379)
Q Consensus 54 iiv~~~~~~~~i~~~l~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~i~~~~~~~~lv~~gD~i~-~~dl~~~l~~~~ 131 (379)
|+|+-....+...+.+......++..+.++..+...|.+.+.-.+++.... ++++++.+|..+ +.-+..+++...
T Consensus 34 IIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~g---dyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 34 LIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVET---PYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred EEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccC---CEEEEECCCCCCChhHHHHHHHHhc
Confidence 555533222223333433322223345555555566888887777776654 589999999998 444777777655
No 187
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=25.70 E-value=1.1e+02 Score=25.51 Aligned_cols=22 Identities=14% Similarity=0.444 Sum_probs=15.4
Q ss_pred CCCCCceEEEEEecCCCCCCccCC
Q 016989 3 SSEDDKVVAVIMVGGPTKGTRFRP 26 (379)
Q Consensus 3 ~~~~~~~~aVIla~G~~~gtRl~~ 26 (379)
.||..+++..||+.| .|+.+..
T Consensus 3 ~~~~~~~ri~vl~SG--~gsnl~a 24 (215)
T 3kcq_A 3 GSMKKELRVGVLISG--RGSNLEA 24 (215)
T ss_dssp ----CCEEEEEEESS--CCHHHHH
T ss_pred CCCCCCCEEEEEEEC--CcHHHHH
Confidence 467677889999999 8988776
No 188
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=24.61 E-value=2.1e+02 Score=26.39 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=37.8
Q ss_pred CCChHHHHHHHHHhhc-cCCCCeEEEEcCCee-e-cCChHHHHHHHHhcCCceEEEE
Q 016989 88 PHGSAGALYNFRDLIM-EDNPSHIFLLNCDVC-C-SFPLPEMLDAHRNYGGMGTILV 141 (379)
Q Consensus 88 ~~g~~~al~~~~~~i~-~~~~~~~lv~~gD~i-~-~~dl~~~l~~~~~~~~~~ti~~ 141 (379)
..|-+.|+..+.++.. ....|.++++.||.- . +.++.++++... .++++++..
T Consensus 73 n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~-~g~D~V~g~ 128 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAAD-FGYGLVRHY 128 (397)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHH-TTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHH-cCCCEEEEE
Confidence 4799999999984332 223467899999995 4 567888888654 467776654
No 189
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.26 E-value=3.5e+02 Score=22.39 Aligned_cols=17 Identities=24% Similarity=0.628 Sum_probs=14.5
Q ss_pred ceEEEEEecCCCCCCccCC
Q 016989 8 KVVAVIMVGGPTKGTRFRP 26 (379)
Q Consensus 8 ~~~aVIla~G~~~gtRl~~ 26 (379)
+++.+||+.| .||.|..
T Consensus 5 ~~riavl~SG--~Gsnl~a 21 (215)
T 3tqr_A 5 PLPIVVLISG--NGTNLQA 21 (215)
T ss_dssp CEEEEEEESS--CCHHHHH
T ss_pred CcEEEEEEeC--CcHHHHH
Confidence 4688899999 8998887
Done!